assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013201725.1_ASM1320172v1	NZ_CP053835	Arcobacter defluvii strain LMG 25694 chromosome, complete genome	1	52199-52310	1	CRISPRCasFinder	no		csa3,cas6,PrimPol,DEDDh,WYL,cas9,cas1,cas2,PD-DExK,cas4,cas3,cas5,cas7,cas8b1,casR	Orphan	GCACAAGTTACAACGGGTGATGGTTC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas6,PrimPol,DEDDh,WYL,cas9,cas1,cas2,PD-DExK,cas4,cas3,cas5,cas7,cas8b1,casR	NA|126aa|up_2|NZ_CP053835.1_48280_48658_-,NA	NA|112aa|up_9|NZ_CP053835.1_44306_44642_-	pfam03206, NifW, Nitrogen fixation protein NifW	NA|174aa|up_8|NZ_CP053835.1_44653_45175_-	PRK09267, PRK09267, flavodoxin FldA; Validated	NA|144aa|up_7|NZ_CP053835.1_45185_45617_-	pfam03270, DUF269, Protein of unknown function, DUF269	NA|132aa|up_6|NZ_CP053835.1_45616_46012_-	TIGR02663, Protein_NifX, nitrogen fixation protein NifX	NA|418aa|up_5|NZ_CP053835.1_46076_47330_-	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC	NA|148aa|up_4|NZ_CP053835.1_47313_47757_-	sd00045, ANK, ankyrin repeats	NA|174aa|up_3|NZ_CP053835.1_47757_48279_-	COG2077, Tpx, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|126aa|up_2|NZ_CP053835.1_48280_48658_-	NA	NA|432aa|up_1|NZ_CP053835.1_48647_49943_-	PRK14476, PRK14476, nitrogenase molybdenum-cofactor biosynthesis protein NifN; Provisional	NA|545aa|up_0|NZ_CP053835.1_50168_51803_+	COG4938, COG4938, Uncharacterized conserved protein [Function unknown]	NA|447aa|down_0|NZ_CP053835.1_52697_54038_-	cd01968, Nitrogenase_NifE_I, Nitrogenase_NifE_I: a subgroup of the NifE subunit of the NifEN complex: NifE forms an alpha2beta2 tetramer with NifN	NA|177aa|down_1|NZ_CP053835.1_54139_54670_-	PRK04930, PRK04930, glutathione-regulated potassium-efflux system ancillary protein KefG; Provisional	NA|115aa|down_2|NZ_CP053835.1_54772_55117_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|130aa|down_3|NZ_CP053835.1_55192_55582_+	cd00851, MTH1175, This uncharacterized conserved protein belongs to a family of iron-molybdenum cluster-binding proteins that includes NifX, NifB, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of the dinitrogenase enzyme	NA|324aa|down_4|NZ_CP053835.1_55591_56563_+	sd00010, SLR, Sel1-like repeat	NA|122aa|down_5|NZ_CP053835.1_56559_56925_+	TIGR02663, Protein_NifX, nitrogen fixation protein NifX	NA|413aa|down_6|NZ_CP053835.1_56914_58153_+	COG0426, FpaA, Uncharacterized flavoproteins [Energy production and conversion]	NA|276aa|down_7|NZ_CP053835.1_58223_59051_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|393aa|down_8|NZ_CP053835.1_59148_60327_+	cd06180, MFS_YjiJ, Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters	NA|206aa|down_9|NZ_CP053835.1_60335_60953_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]
GCF_013201725.1_ASM1320172v1	NZ_CP053835	Arcobacter defluvii strain LMG 25694 chromosome, complete genome	2	1325183-1326935	2,1,1,2,3,4	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR,PILER-CR	no	WYL,cas9,cas1,cas2	csa3,cas6,PrimPol,DEDDh,WYL,cas9,cas1,cas2,PD-DExK,cas4,cas3,cas5,cas7,cas8b1,casR	Type II-B,Type II-A,Type II-C	ATTTTATCACAAAGGGGTTTGTAGGGGTCTTAAAAC,ATTTTATCACAAAGGGGTTTGTAGGGGTCTTAAAAC,TTTATTTTATCACAAAGGGGTTTGTAGGGGTCTTAAAACA,ATTTTATCACAAAGGGGTTTGTAGGGGTCTTAAAAC,AATATTTTATCACAAAGGGGTTTGTAGGGGTCTTAAAACA,TACATTACATTTTATCACAAAGGGGTTTGTAGGGGTCTTAAAACAA	36,36,40,36,40,46	0	0	NA	NA	NA:NA:NA:NA:NA:NA	26,26,18,18,18,18	26	TypeII-C,TypeII-B,TypeII-A	csa3,cas6,PrimPol,DEDDh,WYL,cas9,cas1,cas2,PD-DExK,cas4,cas3,cas5,cas7,cas8b1,casR	NA|83aa|up_9|NZ_CP053835.1_1314601_1314850_+,NA|148aa|up_8|NZ_CP053835.1_1315109_1315553_+,NA|154aa|up_6|NZ_CP053835.1_1316377_1316839_+,NA|69aa|down_0|NZ_CP053835.1_1327068_1327275_-,NA|199aa|down_1|NZ_CP053835.1_1327288_1327885_-,NA|83aa|down_2|NZ_CP053835.1_1328098_1328347_-,NA|57aa|down_6|NZ_CP053835.1_1331096_1331267_+	NA|83aa|up_9|NZ_CP053835.1_1314601_1314850_+	NA	NA|148aa|up_8|NZ_CP053835.1_1315109_1315553_+	NA	NA|240aa|up_7|NZ_CP053835.1_1315566_1316286_+	smart00842, FtsA, Cell division protein FtsA	NA|154aa|up_6|NZ_CP053835.1_1316377_1316839_+	NA	NA|362aa|up_5|NZ_CP053835.1_1316920_1318006_+	pfam14281, PDDEXK_4, PD-(D/E)XK nuclease superfamily	NA|365aa|up_4|NZ_CP053835.1_1318310_1319405_-	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|55aa|up_3|NZ_CP053835.1_1320014_1320179_+	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	cas9|1112aa|up_2|NZ_CP053835.1_1320423_1323759_+	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	cas1|308aa|up_1|NZ_CP053835.1_1323758_1324682_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|111aa|up_0|NZ_CP053835.1_1324668_1325001_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|69aa|down_0|NZ_CP053835.1_1327068_1327275_-	NA	NA|199aa|down_1|NZ_CP053835.1_1327288_1327885_-	NA	NA|83aa|down_2|NZ_CP053835.1_1328098_1328347_-	NA	NA|95aa|down_3|NZ_CP053835.1_1328861_1329146_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|84aa|down_4|NZ_CP053835.1_1329135_1329387_-	PRK09778, PRK09778, type I toxin-antitoxin system antitoxin YafN	NA|129aa|down_5|NZ_CP053835.1_1330191_1330578_-	pfam18812, PBECR3, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	NA|57aa|down_6|NZ_CP053835.1_1331096_1331267_+	NA	NA|214aa|down_7|NZ_CP053835.1_1331267_1331909_+	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|361aa|down_8|NZ_CP053835.1_1331912_1332995_-	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|253aa|down_9|NZ_CP053835.1_1333321_1334080_+	PRK08456, PRK08456, flagellar motor protein MotA; Validated
GCF_013201725.1_ASM1320172v1	NZ_CP053835	Arcobacter defluvii strain LMG 25694 chromosome, complete genome	3	1544312-1544406	3	CRISPRCasFinder	no		csa3,cas6,PrimPol,DEDDh,WYL,cas9,cas1,cas2,PD-DExK,cas4,cas3,cas5,cas7,cas8b1,casR	Orphan	TATTTGATTCTTCTTTTACTTCTTC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas6,PrimPol,DEDDh,WYL,cas9,cas1,cas2,PD-DExK,cas4,cas3,cas5,cas7,cas8b1,casR	NA|93aa|up_0|NZ_CP053835.1_1543958_1544237_-,NA	NA|725aa|up_9|NZ_CP053835.1_1534341_1536516_+	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional	NA|123aa|up_8|NZ_CP053835.1_1536683_1537052_+	cd17562, REC_CheY4-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins	NA|701aa|up_7|NZ_CP053835.1_1537065_1539168_+	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]	NA|282aa|up_6|NZ_CP053835.1_1539173_1540019_+	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]	NA|226aa|up_5|NZ_CP053835.1_1540015_1540693_+	cd16352, CheD, chemotaxis protein CheD stimulates methylation of methyl-accepting chemotaxis proteins	NA|358aa|up_4|NZ_CP053835.1_1540716_1541790_+	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB	NA|196aa|up_3|NZ_CP053835.1_1541800_1542388_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|351aa|up_2|NZ_CP053835.1_1542495_1543548_+	pfam18644, Phage_int_SAM_6, Phage integrase SAM-like domain	NA|119aa|up_1|NZ_CP053835.1_1543601_1543958_+	cd03416, CbiX_SirB_N, Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain	NA|93aa|up_0|NZ_CP053835.1_1543958_1544237_-	NA	NA|656aa|down_0|NZ_CP053835.1_1544779_1546747_-	cd06456, M3A_DCP, Peptidase family M3, dipeptidyl carboxypeptidase (DCP)	NA|276aa|down_1|NZ_CP053835.1_1546761_1547589_-	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional	NA|356aa|down_2|NZ_CP053835.1_1547642_1548710_-	PRK08446, PRK08446, coproporphyrinogen III oxidase family protein	NA|166aa|down_3|NZ_CP053835.1_1548765_1549263_+	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed	NA|404aa|down_4|NZ_CP053835.1_1549280_1550492_+	PRK06635, PRK06635, aspartate kinase; Reviewed	NA|184aa|down_5|NZ_CP053835.1_1550494_1551046_+	pfam12163, HobA, DNA replication regulator	NA|210aa|down_6|NZ_CP053835.1_1551048_1551678_+	PRK08485, PRK08485, DNA polymerase III subunit delta'; Validated	NA|380aa|down_7|NZ_CP053835.1_1551689_1552829_+	cd00739, DHPS, DHPS subgroup of Pterin binding enzymes	NA|277aa|down_8|NZ_CP053835.1_1552842_1553673_-	PRK08507, PRK08507, prephenate dehydrogenase; Validated	NA|768aa|down_9|NZ_CP053835.1_1553762_1556066_+	TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein
GCF_013201725.1_ASM1320172v1	NZ_CP053835	Arcobacter defluvii strain LMG 25694 chromosome, complete genome	4	1544567-1544663	4	CRISPRCasFinder	no		csa3,cas6,PrimPol,DEDDh,WYL,cas9,cas1,cas2,PD-DExK,cas4,cas3,cas5,cas7,cas8b1,casR	Orphan	TATTTGATTCTTCTTTTACTTCTTC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas6,PrimPol,DEDDh,WYL,cas9,cas1,cas2,PD-DExK,cas4,cas3,cas5,cas7,cas8b1,casR	NA|93aa|up_0|NZ_CP053835.1_1543958_1544237_-,NA	NA|725aa|up_9|NZ_CP053835.1_1534341_1536516_+	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional	NA|123aa|up_8|NZ_CP053835.1_1536683_1537052_+	cd17562, REC_CheY4-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins	NA|701aa|up_7|NZ_CP053835.1_1537065_1539168_+	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]	NA|282aa|up_6|NZ_CP053835.1_1539173_1540019_+	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]	NA|226aa|up_5|NZ_CP053835.1_1540015_1540693_+	cd16352, CheD, chemotaxis protein CheD stimulates methylation of methyl-accepting chemotaxis proteins	NA|358aa|up_4|NZ_CP053835.1_1540716_1541790_+	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB	NA|196aa|up_3|NZ_CP053835.1_1541800_1542388_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|351aa|up_2|NZ_CP053835.1_1542495_1543548_+	pfam18644, Phage_int_SAM_6, Phage integrase SAM-like domain	NA|119aa|up_1|NZ_CP053835.1_1543601_1543958_+	cd03416, CbiX_SirB_N, Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain	NA|93aa|up_0|NZ_CP053835.1_1543958_1544237_-	NA	NA|656aa|down_0|NZ_CP053835.1_1544779_1546747_-	cd06456, M3A_DCP, Peptidase family M3, dipeptidyl carboxypeptidase (DCP)	NA|276aa|down_1|NZ_CP053835.1_1546761_1547589_-	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional	NA|356aa|down_2|NZ_CP053835.1_1547642_1548710_-	PRK08446, PRK08446, coproporphyrinogen III oxidase family protein	NA|166aa|down_3|NZ_CP053835.1_1548765_1549263_+	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed	NA|404aa|down_4|NZ_CP053835.1_1549280_1550492_+	PRK06635, PRK06635, aspartate kinase; Reviewed	NA|184aa|down_5|NZ_CP053835.1_1550494_1551046_+	pfam12163, HobA, DNA replication regulator	NA|210aa|down_6|NZ_CP053835.1_1551048_1551678_+	PRK08485, PRK08485, DNA polymerase III subunit delta'; Validated	NA|380aa|down_7|NZ_CP053835.1_1551689_1552829_+	cd00739, DHPS, DHPS subgroup of Pterin binding enzymes	NA|277aa|down_8|NZ_CP053835.1_1552842_1553673_-	PRK08507, PRK08507, prephenate dehydrogenase; Validated	NA|768aa|down_9|NZ_CP053835.1_1553762_1556066_+	TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein
GCF_013201725.1_ASM1320172v1	NZ_CP053835	Arcobacter defluvii strain LMG 25694 chromosome, complete genome	5	1935445-1939193	5,5,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas4,cas3,cas5,cas7,cas8b1,cas6	csa3,cas6,PrimPol,DEDDh,WYL,cas9,cas1,cas2,PD-DExK,cas4,cas3,cas5,cas7,cas8b1,casR	Type I-B	GTTTCAATACATTATATGTTTAAGTTCAA,GTTTCAATACATTATATGTTTAAGTTCAAG,GTTTCAATACATTATATGTTTAAGTTCAAG	29,30,30	0	0	NA	NA	NA:NA:NA	57,57,57	57	TypeI-B	csa3,cas6,PrimPol,DEDDh,WYL,cas9,cas1,cas2,PD-DExK,cas4,cas3,cas5,cas7,cas8b1,casR	NA|64aa|up_9|NZ_CP053835.1_1926356_1926548_+,NA|85aa|up_8|NZ_CP053835.1_1926558_1926813_+,NA|117aa|up_4|NZ_CP053835.1_1930299_1930650_-,NA|139aa|up_1|NZ_CP053835.1_1932101_1932518_-,cas8b1|576aa|down_6|NZ_CP053835.1_1945156_1946884_-	NA|64aa|up_9|NZ_CP053835.1_1926356_1926548_+	NA	NA|85aa|up_8|NZ_CP053835.1_1926558_1926813_+	NA	NA|485aa|up_7|NZ_CP053835.1_1926844_1928299_-	PRK05326, PRK05326, potassium/proton antiporter	NA|499aa|up_6|NZ_CP053835.1_1928403_1929900_-	pfam07556, DUF1538, Protein of unknown function (DUF1538)	NA|129aa|up_5|NZ_CP053835.1_1929903_1930290_-	cd04630, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria	NA|117aa|up_4|NZ_CP053835.1_1930299_1930650_-	NA	NA|282aa|up_3|NZ_CP053835.1_1930646_1931492_-	cd00293, USP_Like, Usp: Universal stress protein family	NA|133aa|up_2|NZ_CP053835.1_1931668_1932067_+	pfam11215, DUF3010, Protein of unknown function (DUF3010)	NA|139aa|up_1|NZ_CP053835.1_1932101_1932518_-	NA	NA|749aa|up_0|NZ_CP053835.1_1932831_1935078_-	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]	cas2|104aa|down_0|NZ_CP053835.1_1939358_1939670_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|335aa|down_1|NZ_CP053835.1_1939666_1940671_-	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas4|167aa|down_2|NZ_CP053835.1_1940680_1941181_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|730aa|down_3|NZ_CP053835.1_1941299_1943489_-	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas5|239aa|down_4|NZ_CP053835.1_1943488_1944205_-	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP	cas7|312aa|down_5|NZ_CP053835.1_1944206_1945142_-	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas8b1|576aa|down_6|NZ_CP053835.1_1945156_1946884_-	NA	cas6|250aa|down_7|NZ_CP053835.1_1946880_1947630_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|294aa|down_8|NZ_CP053835.1_1947734_1948616_-	cd02431, Ferritin_CCC1_C, CCC1-related domain of ferritin	NA|511aa|down_9|NZ_CP053835.1_1948629_1950162_-	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
