The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP053835	Arcobacter defluvii strain LMG 25694 chromosome, complete genome	3021240	66890	74625	3021240		uncultured_Caudovirales_phage(16.67%)	6	NA	NA
WP_129011443.1|66890_68153_-	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	59.6	2.0e-08
WP_164968520.1|68161_68554_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	48.0	2.1e-28
WP_129011445.1|68773_69670_-	RNA pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	27.1	3.0e-06
WP_014472794.1|69818_71147_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	29.9	2.7e-19
WP_129011446.1|71161_73546_+	ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4P767	Pseudomonas_phage	39.5	1.6e-142
WP_014472796.1|73605_74625_+	ribonucleotide-diphosphate reductase subunit beta	NA	U5Q1G6	Bacillus_phage	32.1	2.1e-48
>prophage 2
NZ_CP053835	Arcobacter defluvii strain LMG 25694 chromosome, complete genome	3021240	806098	815017	3021240		Enterobacteria_phage(28.57%)	9	NA	NA
WP_129010997.1|806098_807541_+	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	39.5	2.5e-74
WP_129010996.1|807726_808737_+	hypothetical protein	NA	NA	NA	NA	NA
WP_164968498.1|808808_809759_+	hypothetical protein	NA	NA	NA	NA	NA
WP_129010994.1|809762_810803_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	49.1	1.1e-89
WP_129010993.1|810803_811694_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	61.5	1.3e-102
WP_129010992.1|811695_812271_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A1D8EQH2	Escherichia_phage	45.9	8.4e-34
WP_129010991.1|812263_813157_+	dTDP-4-dehydrorhamnose reductase	NA	K7QJU0	Escherichia_phage	37.0	4.6e-39
WP_129010990.1|813153_813975_+	KilA-N domain-containing protein	NA	Q4ZC41	Staphylococcus_virus	56.7	4.6e-86
WP_129010989.1|813976_815017_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	47.4	3.8e-77
>prophage 3
NZ_CP053835	Arcobacter defluvii strain LMG 25694 chromosome, complete genome	3021240	2224352	2274714	3021240	plate,integrase	Vibrio_phage(16.67%)	52	2238952:2238969	2276500:2276517
WP_129011246.1|2224352_2225453_+|integrase	site-specific integrase	integrase	A0A059WLJ1	Vibrio_phage	32.2	7.4e-39
WP_129011247.1|2225742_2227002_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172658797.1|2227173_2227929_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164968508.1|2228036_2228885_-	DUF726 domain-containing protein	NA	NA	NA	NA	NA
WP_129011250.1|2228835_2229594_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129011251.1|2229628_2229799_-	TFIIB-type zinc ribbon-containing protein	NA	NA	NA	NA	NA
WP_129011252.1|2229825_2230587_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129011253.1|2230656_2231547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129011254.1|2231543_2231915_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129011255.1|2231977_2232316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129011276.1|2232433_2232676_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_129011256.1|2232694_2233303_-	inovirus-type Gp2 protein	NA	NA	NA	NA	NA
WP_164968509.1|2233628_2233769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129011257.1|2233768_2234065_-	DUF2958 domain-containing protein	NA	NA	NA	NA	NA
WP_164968510.1|2234067_2234298_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129011258.1|2234309_2235170_-	DNA repair protein Rad52	NA	F8TUV5	EBPR_podovirus	39.9	1.5e-15
WP_129011259.1|2235183_2235807_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129011260.1|2235830_2236658_-	DUF932 domain-containing protein	NA	A0A1L2CVW9	Pectobacterium_phage	30.2	4.4e-28
WP_129011261.1|2236771_2236984_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129011262.1|2237115_2237961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129011263.1|2238098_2239571_-	hypothetical protein	NA	NA	NA	NA	NA
2238952:2238969	attL	TTTATTACTTCATTAAAA	NA	NA	NA	NA
WP_129011264.1|2239725_2239926_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_129011265.1|2240062_2241577_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172658798.1|2241931_2242072_+	hypothetical protein	NA	NA	NA	NA	NA
WP_129011266.1|2242171_2242585_+	hypothetical protein	NA	NA	NA	NA	NA
WP_129011267.1|2242577_2243426_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_129011268.1|2243980_2244622_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164968511.1|2244643_2245669_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129011269.1|2245780_2247037_-	AAA family ATPase	NA	A0A127AW94	Bacillus_phage	24.5	2.7e-08
WP_129011270.1|2247038_2247302_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129011271.1|2247319_2248450_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129011272.1|2248512_2249679_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_129011273.1|2249698_2250313_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172658799.1|2250935_2251895_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172658800.1|2251903_2252860_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172658801.1|2252868_2253831_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172658802.1|2253839_2254802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172658803.1|2254810_2255773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172658804.1|2255781_2256735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129012238.1|2256748_2258611_-	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
WP_172658805.1|2258610_2260872_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
WP_014474885.1|2260874_2261612_-	serine/threonine protein kinase	NA	A0A1S5V1U4	Saudi_moumouvirus	28.4	4.5e-08
WP_014474886.1|2261614_2264980_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_129012202.1|2264966_2265821_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_014474888.1|2265831_2267160_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_129012203.1|2267149_2267611_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_129012204.1|2267622_2268891_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_164968551.1|2268895_2269036_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129012205.1|2269103_2271542_-	AAA family ATPase	NA	K4FB40	Cronobacter_phage	34.8	2.2e-99
WP_014474893.1|2271531_2272524_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_129012206.1|2272534_2274304_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_014474895.1|2274306_2274714_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
2276500:2276517	attR	TTTATTACTTCATTAAAA	NA	NA	NA	NA
>prophage 4
NZ_CP053835	Arcobacter defluvii strain LMG 25694 chromosome, complete genome	3021240	2675205	2682172	3021240	tRNA	Campylobacter_virus(33.33%)	9	NA	NA
WP_014475237.1|2675205_2675892_+	7-cyano-7-deazaguanine synthase QueC	NA	R4TAI3	Halovirus	34.5	8.2e-28
WP_014475238.1|2675891_2676425_+	6-carboxytetrahydropterin synthase	NA	D5GVR0	Campylobacter_virus	51.4	2.0e-45
WP_129010883.1|2676417_2677182_+	7-carboxy-7-deazaguanine synthase QueE	NA	D5GV09	Campylobacter_virus	41.7	4.2e-49
WP_129010882.1|2677250_2677994_+	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.6	8.3e-18
WP_004510944.1|2678087_2678318_+	acyl carrier protein	NA	M4QDG5	Prochlorococcus_phage	66.0	5.4e-08
WP_129010881.1|2678424_2679684_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_129010880.1|2679750_2680692_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA	NA
WP_014475243.1|2680704_2681049_-	histidine triad nucleotide-binding protein	NA	NA	NA	NA	NA
WP_014475244.1|2681179_2682172_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.3	3.2e-33
>prophage 5
NZ_CP053835	Arcobacter defluvii strain LMG 25694 chromosome, complete genome	3021240	2721017	2731421	3021240	tRNA	Bacillus_phage(16.67%)	8	NA	NA
WP_014475284.1|2721017_2723072_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.3	4.5e-106
WP_129010854.1|2723187_2724084_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_129010853.1|2724110_2725073_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	32.5	2.7e-13
WP_014475287.1|2725072_2726419_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.9	2.6e-54
WP_014475288.1|2726431_2727205_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_014475289.1|2727219_2728149_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	43.3	3.2e-59
WP_014475290.1|2728365_2728683_-	thioredoxin	NA	A0A0K2FIM3	Achromobacter_phage	38.6	1.2e-13
WP_129010852.1|2728865_2731421_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	36.1	1.1e-74
>prophage 6
NZ_CP053835	Arcobacter defluvii strain LMG 25694 chromosome, complete genome	3021240	2969336	2981339	3021240		Organic_Lake_phycodnavirus(10.0%)	13	NA	NA
WP_129011858.1|2969336_2970572_+	DNA (cytosine-5-)-methyltransferase	NA	F2Y148	Organic_Lake_phycodnavirus	47.0	2.4e-78
WP_014475498.1|2970579_2971818_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	32.7	8.4e-07
WP_129011859.1|2971928_2972930_+	AAA family ATPase	NA	H6WG28	Cyanophage	42.0	3.4e-59
WP_129011860.1|2972933_2974064_+	hypothetical protein	NA	A0A2I7SAP6	Vibrio_phage	23.8	1.5e-23
WP_164968536.1|2974071_2974752_-	metallophosphoesterase	NA	A0A0F6WBP4	Sinorhizobium_phage	28.1	1.8e-11
WP_129011862.1|2974766_2975081_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_014475503.1|2975294_2976563_+	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	A0A0B5JD48	Pandoravirus	25.1	4.4e-11
WP_014475504.1|2976565_2976979_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_014475505.1|2976989_2977922_+	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	53.7	6.6e-81
WP_041654950.1|2977963_2978194_+	DUF2061 domain-containing protein	NA	A0A1B0XTK5	Freshwater_phage	40.3	2.0e-07
WP_129011863.1|2978202_2978907_+	phosphoadenylyl-sulfate reductase	NA	M4W6M9	Bacillus_phage	33.3	1.3e-07
WP_129011864.1|2978968_2979880_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_129011865.1|2979881_2981339_+	sulfate adenylyltransferase subunit CysN	NA	A0A1V0SGC3	Hokovirus	26.0	9.9e-31
