assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013177455.1_ASM1317745v1	NZ_CP053660	Nocardioides sp. zg-579 chromosome, complete genome	1	54857-54941	1	CRISPRCasFinder	no		DinG,cas3,DEDDh,csa3,cas4,WYL,RT	Orphan	GGTTTTGTCGGCCGGCCGATGAA	23	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,DEDDh,csa3,cas4,WYL,RT	NA|197aa|up_6|NZ_CP053660.1_47540_48131_-,NA	NA|781aa|up_9|NZ_CP053660.1_42854_45197_-	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|198aa|up_8|NZ_CP053660.1_45262_45856_-	TIGR03968, transcriptional_regulator_TetR_family, mycofactocin system transcriptional regulator	NA|447aa|up_7|NZ_CP053660.1_46007_47348_+	COG0281, SfcA, Malic enzyme [Energy production and conversion]	NA|197aa|up_6|NZ_CP053660.1_47540_48131_-	NA	NA|253aa|up_5|NZ_CP053660.1_48195_48954_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|608aa|up_4|NZ_CP053660.1_49031_50855_-	cd02523, PC_cytidylyltransferase, Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline	NA|269aa|up_3|NZ_CP053660.1_51048_51855_+	pfam01066, CDP-OH_P_transf, CDP-alcohol phosphatidyltransferase	NA|308aa|up_2|NZ_CP053660.1_51851_52775_+	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|356aa|up_1|NZ_CP053660.1_52982_54050_+	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit	NA|252aa|up_0|NZ_CP053660.1_54046_54802_+	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein	NA|483aa|down_0|NZ_CP053660.1_55047_56496_+	cd03512, Alkane-hydroxylase, Alkane hydroxylase is a bacterial, integral-membrane di-iron enzyme that shares a requirement for iron and oxygen for activity similar to that of the non-heme integral-membrane acyl coenzyme A (CoA) desaturases and acyl lipid desaturases	NA|72aa|down_1|NZ_CP053660.1_56495_56711_+	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|195aa|down_2|NZ_CP053660.1_56794_57379_+	pfam18556, TetR_C_35, Bacterial Tetracyclin repressor, C-terminal domain	NA|464aa|down_3|NZ_CP053660.1_57375_58767_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|396aa|down_4|NZ_CP053660.1_58899_60087_+	pfam13539, Peptidase_M15_4, D-alanyl-D-alanine carboxypeptidase	NA|444aa|down_5|NZ_CP053660.1_60108_61440_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|681aa|down_6|NZ_CP053660.1_61445_63488_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|222aa|down_7|NZ_CP053660.1_63564_64230_+	COG3217, COG3217, Uncharacterized Fe-S protein [General function prediction only]	NA|322aa|down_8|NZ_CP053660.1_64239_65205_+	cd08241, QOR1, Quinone oxidoreductase (QOR)	NA|166aa|down_9|NZ_CP053660.1_65866_66364_+	pfam04029, 2-ph_phosp, 2-phosphosulpholactate phosphatase
GCF_013177455.1_ASM1317745v1	NZ_CP053660	Nocardioides sp. zg-579 chromosome, complete genome	2	278466-278577	2	CRISPRCasFinder	no		DinG,cas3,DEDDh,csa3,cas4,WYL,RT	Orphan	GGCCTGAGCGTGTCGAAACCCGGTGAGGTG	30	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,DEDDh,csa3,cas4,WYL,RT	NA,NA	NA|453aa|up_9|NZ_CP053660.1_265734_267093_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|492aa|up_8|NZ_CP053660.1_267146_268622_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|256aa|up_7|NZ_CP053660.1_268686_269454_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|421aa|up_6|NZ_CP053660.1_269556_270819_+	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain	NA|455aa|up_5|NZ_CP053660.1_270966_272331_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|287aa|up_4|NZ_CP053660.1_272424_273285_+	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]	NA|212aa|up_3|NZ_CP053660.1_273281_273917_+	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|801aa|up_2|NZ_CP053660.1_273913_276316_+	pfam02738, Ald_Xan_dh_C2, Molybdopterin-binding domain of aldehyde dehydrogenase	NA|225aa|up_1|NZ_CP053660.1_276312_276987_+	cd05018, CoxG, Carbon monoxide dehydrogenase subunit G (CoxG)	NA|452aa|up_0|NZ_CP053660.1_277049_278405_+	PRK07486, PRK07486, amidase; Provisional	NA|100aa|down_0|NZ_CP053660.1_278720_279020_+	cd10456, GIY-YIG_UPF0213, The GIY-YIG domain of uncharacterized protein family UPF0213 related to structure-specific endonuclease SLX1	NA|691aa|down_1|NZ_CP053660.1_279490_281563_+	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|661aa|down_2|NZ_CP053660.1_281559_283542_+	pfam02538, Hydantoinase_B, Hydantoinase B/oxoprolinase	NA|267aa|down_3|NZ_CP053660.1_283562_284363_+	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|316aa|down_4|NZ_CP053660.1_284433_285381_+	PRK12353, PRK12353, putative amino acid kinase; Reviewed	NA|369aa|down_5|NZ_CP053660.1_285384_286491_+	TIGR02714, Cyanuric_acid_amidohydrolase, ring-opening amidohydrolases	NA|389aa|down_6|NZ_CP053660.1_286600_287767_-	pfam02515, CoA_transf_3, CoA-transferase family III	NA|557aa|down_7|NZ_CP053660.1_287843_289514_+	PRK08316, PRK08316, acyl-CoA synthetase; Validated	NA|371aa|down_8|NZ_CP053660.1_289663_290776_+	pfam03631, Virul_fac_BrkB, Virulence factor BrkB	NA|264aa|down_9|NZ_CP053660.1_290934_291726_-	cd07814, SRPBCC_CalC_Aha1-like, Putative hydrophobic ligand-binding SRPBCC domain of Micromonospora echinospora CalC, human Aha1, and related proteins
GCF_013177455.1_ASM1317745v1	NZ_CP053660	Nocardioides sp. zg-579 chromosome, complete genome	3	848435-848589	3	CRISPRCasFinder	no		DinG,cas3,DEDDh,csa3,cas4,WYL,RT	Orphan	CGCCAGGGCTCGCTGCTCGACCAGCGGGTGGCCGCCAGGGCTCGCTGCTCGACCA	55	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,DEDDh,csa3,cas4,WYL,RT	NA|137aa|up_6|NZ_CP053660.1_844445_844856_+,NA|48aa|up_4|NZ_CP053660.1_845369_845513_+,NA|164aa|down_0|NZ_CP053660.1_848717_849209_+,NA|242aa|down_3|NZ_CP053660.1_850184_850910_+,NA|254aa|down_4|NZ_CP053660.1_850831_851593_-,NA|142aa|down_5|NZ_CP053660.1_851612_852038_-,NA|161aa|down_9|NZ_CP053660.1_855282_855765_+	NA|330aa|up_9|NZ_CP053660.1_841832_842822_+	cd19086, AKR_AKR11C1, AKR11C family of aldo-keto reductase (AKR)	NA|120aa|up_8|NZ_CP053660.1_842818_843178_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|383aa|up_7|NZ_CP053660.1_843222_844371_+	PRK03522, rumB, 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA|137aa|up_6|NZ_CP053660.1_844445_844856_+	NA	NA|130aa|up_5|NZ_CP053660.1_844895_845285_-	pfam09996, DUF2237, Uncharacterized protein conserved in bacteria (DUF2237)	NA|48aa|up_4|NZ_CP053660.1_845369_845513_+	NA	NA|208aa|up_3|NZ_CP053660.1_845549_846173_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|175aa|up_2|NZ_CP053660.1_846178_846703_+	COG3265, GntK, Gluconate kinase [Carbohydrate transport and metabolism]	NA|333aa|up_1|NZ_CP053660.1_846782_847781_+	pfam02720, DUF222, Domain of unknown function (DUF222)	NA|122aa|up_0|NZ_CP053660.1_847686_848052_+	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|164aa|down_0|NZ_CP053660.1_848717_849209_+	NA	NA|83aa|down_1|NZ_CP053660.1_849325_849574_+	TIGR02890, conserved_hypothetical_protein, regulatory protein, yteA family	NA|176aa|down_2|NZ_CP053660.1_849660_850188_+	COG0622, COG0622, Predicted phosphoesterase [General function prediction only]	NA|242aa|down_3|NZ_CP053660.1_850184_850910_+	NA	NA|254aa|down_4|NZ_CP053660.1_850831_851593_-	NA	NA|142aa|down_5|NZ_CP053660.1_851612_852038_-	NA	NA|396aa|down_6|NZ_CP053660.1_852145_853333_-	TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family	NA|419aa|down_7|NZ_CP053660.1_853369_854626_+	PRK00844, glgC, glucose-1-phosphate adenylyltransferase; Provisional	NA|197aa|down_8|NZ_CP053660.1_854633_855224_-	cd10028, UDG-F2_TDG_MUG, Uracil DNA glycosylase family 2, includes thymine DNA glycosylase, mismatch-specific uracil DNA glycosylase and similar proteins	NA|161aa|down_9|NZ_CP053660.1_855282_855765_+	NA
GCF_013177455.1_ASM1317745v1	NZ_CP053660	Nocardioides sp. zg-579 chromosome, complete genome	4	1910475-1910573	4	CRISPRCasFinder	no		DinG,cas3,DEDDh,csa3,cas4,WYL,RT	Orphan	CCGGTTGGCCGCTGAAACTTCATCGGCCCGGCGACAG	37	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,DEDDh,csa3,cas4,WYL,RT	NA|183aa|up_6|NZ_CP053660.1_1905577_1906126_+,NA	NA|390aa|up_9|NZ_CP053660.1_1901957_1903127_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|404aa|up_8|NZ_CP053660.1_1903123_1904335_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|411aa|up_7|NZ_CP053660.1_1904348_1905581_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|183aa|up_6|NZ_CP053660.1_1905577_1906126_+	NA	NA|252aa|up_5|NZ_CP053660.1_1906122_1906878_+	pfam10571, UPF0547, Uncharacterized protein family UPF0547	NA|324aa|up_4|NZ_CP053660.1_1907037_1908009_+	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	NA|65aa|up_3|NZ_CP053660.1_1908005_1908200_+	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|303aa|up_2|NZ_CP053660.1_1908204_1909113_+	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|260aa|up_1|NZ_CP053660.1_1909124_1909904_+	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs	NA|168aa|up_0|NZ_CP053660.1_1909914_1910418_+	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme	NA|201aa|down_0|NZ_CP053660.1_1910600_1911203_-	pfam17925, TetR_C_20, Tetracyclin repressor-like, C-terminal domain	NA|428aa|down_1|NZ_CP053660.1_1911420_1912704_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|253aa|down_2|NZ_CP053660.1_1912690_1913449_+	PRK08317, PRK08317, hypothetical protein; Provisional	NA|366aa|down_3|NZ_CP053660.1_1913441_1914539_+	TIGR01577, Uncharacterized_glycosyl_hydrolase_MJ1610, oligosaccharide amylase	NA|203aa|down_4|NZ_CP053660.1_1914497_1915106_-	pfam13578, Methyltransf_24, Methyltransferase domain	NA|694aa|down_5|NZ_CP053660.1_1915272_1917354_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|380aa|down_6|NZ_CP053660.1_1917417_1918557_+	COG1887, TagB, Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]	NA|415aa|down_7|NZ_CP053660.1_1918972_1920217_-	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|476aa|down_8|NZ_CP053660.1_1920327_1921755_+	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT	NA|303aa|down_9|NZ_CP053660.1_1921811_1922720_+	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
GCF_013177455.1_ASM1317745v1	NZ_CP053660	Nocardioides sp. zg-579 chromosome, complete genome	5	1987108-1987194	5	CRISPRCasFinder	no		DinG,cas3,DEDDh,csa3,cas4,WYL,RT	Orphan	TTCATCAAGGTATGCAGGCGAACCG	25	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,DEDDh,csa3,cas4,WYL,RT	NA|127aa|up_7|NZ_CP053660.1_1980777_1981158_-,NA|155aa|up_6|NZ_CP053660.1_1981154_1981619_-,NA	NA|200aa|up_9|NZ_CP053660.1_1978855_1979455_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|388aa|up_8|NZ_CP053660.1_1979447_1980611_+	PRK07801, PRK07801, acetyl-CoA C-acetyltransferase	NA|127aa|up_7|NZ_CP053660.1_1980777_1981158_-	NA	NA|155aa|up_6|NZ_CP053660.1_1981154_1981619_-	NA	NA|361aa|up_5|NZ_CP053660.1_1981785_1982868_-	pfam03060, NMO, Nitronate monooxygenase	NA|279aa|up_4|NZ_CP053660.1_1982864_1983701_-	COG2057, AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit [Lipid metabolism]	NA|298aa|up_3|NZ_CP053660.1_1983697_1984591_-	COG1788, AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid metabolism]	NA|253aa|up_2|NZ_CP053660.1_1984587_1985346_-	PRK07938, PRK07938, enoyl-CoA hydratase family protein	NA|274aa|up_1|NZ_CP053660.1_1985384_1986206_+	PRK07856, PRK07856, SDR family oxidoreductase	NA|294aa|up_0|NZ_CP053660.1_1986202_1987084_+	PRK07791, PRK07791, short chain dehydrogenase; Provisional	NA|314aa|down_0|NZ_CP053660.1_1987309_1988251_+	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin	NA|388aa|down_1|NZ_CP053660.1_1988447_1989611_-	PRK07850, PRK07850, steroid 3-ketoacyl-CoA thiolase	NA|399aa|down_2|NZ_CP053660.1_1989799_1990996_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|384aa|down_3|NZ_CP053660.1_1991129_1992281_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|270aa|down_4|NZ_CP053660.1_1992314_1993124_-	cd01086, MetAP1, Methionine Aminopeptidase 1	NA|388aa|down_5|NZ_CP053660.1_1993239_1994403_-	PRK08313, PRK08313, thiolase domain-containing protein	NA|351aa|down_6|NZ_CP053660.1_1994402_1995455_-	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|340aa|down_7|NZ_CP053660.1_1995525_1996545_-	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|348aa|down_8|NZ_CP053660.1_1996603_1997647_+	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|555aa|down_9|NZ_CP053660.1_1997643_1999308_+	PRK06188, PRK06188, acyl-CoA synthetase; Validated
GCF_013177455.1_ASM1317745v1	NZ_CP053660	Nocardioides sp. zg-579 chromosome, complete genome	6	2065305-2065390	6	CRISPRCasFinder	no		DinG,cas3,DEDDh,csa3,cas4,WYL,RT	Orphan	AACTTCATCGTCCCGGCGCCAGTT	24	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,DEDDh,csa3,cas4,WYL,RT	NA,NA|71aa|down_7|NZ_CP053660.1_2073513_2073726_-	NA|473aa|up_9|NZ_CP053660.1_2057101_2058520_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|405aa|up_8|NZ_CP053660.1_2058569_2059784_+	pfam01458, UPF0051, Uncharacterized protein family (UPF0051)	NA|116aa|up_7|NZ_CP053660.1_2059780_2060128_+	cd03528, Rieske_RO_ferredoxin, Rieske non-heme iron oxygenase (RO) family, Rieske ferredoxin component; composed of the Rieske ferredoxin component of some three-component RO systems including biphenyl dioxygenase (BPDO) and carbazole 1,9a-dioxygenase (CARDO)	NA|254aa|up_6|NZ_CP053660.1_2060124_2060886_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|422aa|up_5|NZ_CP053660.1_2060882_2062148_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|150aa|up_4|NZ_CP053660.1_2062152_2062602_+	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|128aa|up_3|NZ_CP053660.1_2062598_2062982_+	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only]	NA|187aa|up_2|NZ_CP053660.1_2062989_2063550_+	cd06553, ASCH_Ef3133_like, ASC-1 homology domain, subfamily similar to Enterococcus faecalis Ef3133	NA|213aa|up_1|NZ_CP053660.1_2063546_2064185_+	pfam18859, acVLRF1, Actinobacteria/chloroflexi VLRF1 release factor	NA|302aa|up_0|NZ_CP053660.1_2064338_2065244_+	pfam01636, APH, Phosphotransferase enzyme family	NA|319aa|down_0|NZ_CP053660.1_2065436_2066393_-	COG2321, COG2321, Predicted metalloprotease [General function prediction only]	NA|533aa|down_1|NZ_CP053660.1_2066459_2068058_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|268aa|down_2|NZ_CP053660.1_2068160_2068964_+	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily	NA|625aa|down_3|NZ_CP053660.1_2068974_2070849_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|253aa|down_4|NZ_CP053660.1_2070862_2071621_+	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR	NA|307aa|down_5|NZ_CP053660.1_2071506_2072427_-	cd06662, SURF1, SURF1 superfamily	NA|332aa|down_6|NZ_CP053660.1_2072514_2073510_+	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|71aa|down_7|NZ_CP053660.1_2073513_2073726_-	NA	NA|114aa|down_8|NZ_CP053660.1_2073780_2074122_-	pfam11298, DUF3099, Protein of unknown function (DUF3099)	NA|71aa|down_9|NZ_CP053660.1_2074181_2074394_+	pfam07311, Dodecin, Dodecin
GCF_013177455.1_ASM1317745v1	NZ_CP053660	Nocardioides sp. zg-579 chromosome, complete genome	7	3663274-3663350	7	CRISPRCasFinder	no		DinG,cas3,DEDDh,csa3,cas4,WYL,RT	Orphan	GGGCGCCTCCTGCTCGACCAGCAG	24	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,DEDDh,csa3,cas4,WYL,RT	NA|151aa|up_1|NZ_CP053660.1_3660984_3661437_+,NA	NA|538aa|up_9|NZ_CP053660.1_3650654_3652268_-	PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated	NA|435aa|up_8|NZ_CP053660.1_3652372_3653677_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|349aa|up_7|NZ_CP053660.1_3653744_3654791_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|566aa|up_6|NZ_CP053660.1_3654787_3656485_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|390aa|up_5|NZ_CP053660.1_3656569_3657739_+	pfam03403, PAF-AH_p_II, Platelet-activating factor acetylhydrolase, isoform II	NA|294aa|up_4|NZ_CP053660.1_3657910_3658792_+	cd03386, PAP2_Aur1_like, PAP2_like proteins, Aur1_like subfamily	NA|384aa|up_3|NZ_CP053660.1_3658841_3659993_+	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|319aa|up_2|NZ_CP053660.1_3660026_3660983_+	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|151aa|up_1|NZ_CP053660.1_3660984_3661437_+	NA	NA|441aa|up_0|NZ_CP053660.1_3661738_3663061_-	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|410aa|down_0|NZ_CP053660.1_3663379_3664609_-	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|274aa|down_1|NZ_CP053660.1_3664783_3665605_+	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system	NA|235aa|down_2|NZ_CP053660.1_3665604_3666309_+	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|293aa|down_3|NZ_CP053660.1_3666321_3667200_+	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins	NA|390aa|down_4|NZ_CP053660.1_3667201_3668371_+	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins	NA|449aa|down_5|NZ_CP053660.1_3668367_3669714_+	cd06343, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|202aa|down_6|NZ_CP053660.1_3670026_3670632_-	pfam05175, MTS, Methyltransferase small domain	NA|294aa|down_7|NZ_CP053660.1_3670628_3671510_-	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|552aa|down_8|NZ_CP053660.1_3671487_3673143_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|310aa|down_9|NZ_CP053660.1_3673172_3674102_-	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate
GCF_013177455.1_ASM1317745v1	NZ_CP053660	Nocardioides sp. zg-579 chromosome, complete genome	8	4028088-4028179	8	CRISPRCasFinder	no		DinG,cas3,DEDDh,csa3,cas4,WYL,RT	Orphan	CGGTTCATCAAGGTATGCAGCCGAACCGAC	30	1	1	4028118-4028149	NZ_CP053660.1_3809254-3809223	NA	1	1	Orphan	DinG,cas3,DEDDh,csa3,cas4,WYL,RT	NA,NA|165aa|down_1|NZ_CP053660.1_4029393_4029888_+	NA|473aa|up_9|NZ_CP053660.1_4015783_4017202_-	cd03302, Adenylsuccinate_lyase_2, Adenylsuccinate lyase (ASL)_subgroup 2	NA|422aa|up_8|NZ_CP053660.1_4017240_4018506_-	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|428aa|up_7|NZ_CP053660.1_4018532_4019816_-	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|299aa|up_6|NZ_CP053660.1_4020026_4020923_+	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|331aa|up_5|NZ_CP053660.1_4020968_4021961_-	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins	NA|651aa|up_4|NZ_CP053660.1_4022031_4023984_+	PRK00750, lysK, lysyl-tRNA synthetase; Reviewed	NA|331aa|up_3|NZ_CP053660.1_4024058_4025051_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|307aa|up_2|NZ_CP053660.1_4025152_4026073_+	cd08420, PBP2_CysL_like, C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold	NA|141aa|up_1|NZ_CP053660.1_4026045_4026468_-	pfam11349, DUF3151, Protein of unknown function (DUF3151)	NA|518aa|up_0|NZ_CP053660.1_4026466_4028020_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|344aa|down_0|NZ_CP053660.1_4028278_4029310_-	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional	NA|165aa|down_1|NZ_CP053660.1_4029393_4029888_+	NA	NA|159aa|down_2|NZ_CP053660.1_4029911_4030388_+	pfam18306, LDcluster4, SLOG cluster4 family	NA|193aa|down_3|NZ_CP053660.1_4030411_4030990_-	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|216aa|down_4|NZ_CP053660.1_4031059_4031707_-	cd18096, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU	NA|241aa|down_5|NZ_CP053660.1_4031839_4032562_+	PRK10847, PRK10847, DedA family protein	NA|196aa|down_6|NZ_CP053660.1_4032725_4033313_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|194aa|down_7|NZ_CP053660.1_4033408_4033990_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|400aa|down_8|NZ_CP053660.1_4034038_4035238_+	PRK07777, PRK07777, putative succinyldiaminopimelate transaminase DapC	NA|264aa|down_9|NZ_CP053660.1_4035258_4036050_-	PTZ00395, PTZ00395, Sec24-related protein; Provisional
GCF_013177455.1_ASM1317745v1	NZ_CP053660	Nocardioides sp. zg-579 chromosome, complete genome	9	4062612-4062696	9	CRISPRCasFinder	no		DinG,cas3,DEDDh,csa3,cas4,WYL,RT	Orphan	CATCAAGGTATGCAGCCGAACCG	23	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,DEDDh,csa3,cas4,WYL,RT	NA|202aa|up_9|NZ_CP053660.1_4054686_4055292_-,NA|387aa|up_5|NZ_CP053660.1_4057246_4058407_+,NA|152aa|up_2|NZ_CP053660.1_4060533_4060989_+,NA|151aa|up_1|NZ_CP053660.1_4061020_4061473_+,NA|65aa|down_9|NZ_CP053660.1_4072909_4073104_-	NA|202aa|up_9|NZ_CP053660.1_4054686_4055292_-	NA	NA|164aa|up_8|NZ_CP053660.1_4055350_4055842_-	pfam04075, F420H2_quin_red, F420H(2)-dependent quinone reductase	NA|141aa|up_7|NZ_CP053660.1_4055873_4056296_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|300aa|up_6|NZ_CP053660.1_4056342_4057242_+	TIGR03619, F420_Rv2161c, probable F420-dependent oxidoreductase, Rv2161c family	NA|387aa|up_5|NZ_CP053660.1_4057246_4058407_+	NA	NA|258aa|up_4|NZ_CP053660.1_4058481_4059255_+	PRK07890, PRK07890, short chain dehydrogenase; Provisional	NA|381aa|up_3|NZ_CP053660.1_4059293_4060436_+	pfam13469, Sulfotransfer_3, Sulfotransferase family	NA|152aa|up_2|NZ_CP053660.1_4060533_4060989_+	NA	NA|151aa|up_1|NZ_CP053660.1_4061020_4061473_+	NA	NA|374aa|up_0|NZ_CP053660.1_4061484_4062606_+	PLN03138, PLN03138, Protein TOC75; Provisional	NA|434aa|down_0|NZ_CP053660.1_4062788_4064090_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|312aa|down_1|NZ_CP053660.1_4064219_4065155_-	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|203aa|down_2|NZ_CP053660.1_4065151_4065760_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|463aa|down_3|NZ_CP053660.1_4065756_4067145_-	pfam00743, FMO-like, Flavin-binding monooxygenase-like	NA|398aa|down_4|NZ_CP053660.1_4067235_4068429_-	pfam09995, DUF2236, Uncharacterized protein conserved in bacteria (DUF2236)	NA|434aa|down_5|NZ_CP053660.1_4068473_4069775_-	cd06420, GT2_Chondriotin_Pol_N, N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase	NA|353aa|down_6|NZ_CP053660.1_4069771_4070830_-	COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]	NA|309aa|down_7|NZ_CP053660.1_4070826_4071753_-	COG4759, COG4759, Uncharacterized protein conserved in bacteria containing thioredoxin-like domain [Posttranslational modification, protein turnover, chaperones]	NA|388aa|down_8|NZ_CP053660.1_4071749_4072913_-	pfam08007, Cupin_4, Cupin superfamily protein	NA|65aa|down_9|NZ_CP053660.1_4072909_4073104_-	NA
GCF_013177455.1_ASM1317745v1	NZ_CP053660	Nocardioides sp. zg-579 chromosome, complete genome	10	4209012-4209074	10	CRISPRCasFinder	no		DinG,cas3,DEDDh,csa3,cas4,WYL,RT	Orphan	CCGCTGGTTGAGCAGCCAAGGCC	23	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,DEDDh,csa3,cas4,WYL,RT	NA,NA|336aa|down_1|NZ_CP053660.1_4211628_4212636_+	NA|291aa|up_9|NZ_CP053660.1_4196760_4197633_+	COG3001, COG3001, Uncharacterized protein conserved in bacteria [Function unknown]	NA|767aa|up_8|NZ_CP053660.1_4197636_4199937_-	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase	NA|233aa|up_7|NZ_CP053660.1_4200132_4200831_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|468aa|up_6|NZ_CP053660.1_4200827_4202231_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|198aa|up_5|NZ_CP053660.1_4202227_4202821_+	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|282aa|up_4|NZ_CP053660.1_4202868_4203714_+	pfam13622, 4HBT_3, Thioesterase-like superfamily	NA|508aa|up_3|NZ_CP053660.1_4203742_4205266_-	PRK12854, PRK12854, glucose-6-phosphate 1-dehydrogenase; Provisional	NA|390aa|up_2|NZ_CP053660.1_4205208_4206378_-	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]	NA|190aa|up_1|NZ_CP053660.1_4206467_4207037_-	cd01743, GATase1_Anthranilate_Synthase, Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase	NA|642aa|up_0|NZ_CP053660.1_4207041_4208967_-	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]	NA|742aa|down_0|NZ_CP053660.1_4209233_4211459_-	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only]	NA|336aa|down_1|NZ_CP053660.1_4211628_4212636_+	NA	NA|250aa|down_2|NZ_CP053660.1_4212894_4213644_-	PRK07827, PRK07827, enoyl-CoA hydratase family protein	NA|422aa|down_3|NZ_CP053660.1_4213899_4215165_+	pfam02720, DUF222, Domain of unknown function (DUF222)	NA|558aa|down_4|NZ_CP053660.1_4215881_4217555_-	cd02110, SO_family_Moco_dimer, Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved dimerization domain	NA|453aa|down_5|NZ_CP053660.1_4217627_4218986_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|340aa|down_6|NZ_CP053660.1_4218985_4220005_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|223aa|down_7|NZ_CP053660.1_4220132_4220801_+	pfam02469, Fasciclin, Fasciclin domain	NA|200aa|down_8|NZ_CP053660.1_4220840_4221440_+	PRK09646, PRK09646, ECF RNA polymerase sigma factor SigK	NA|256aa|down_9|NZ_CP053660.1_4221441_4222209_+	pfam10099, RskA, Anti-sigma-K factor rskA
