The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP053042	Proteus cibarius strain HNCF44W chromosome, complete genome	3929176	263571	275203	3929176	tRNA	Tupanvirus(50.0%)	12	NA	NA
WP_159242171.1|263571_265554_-	bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA	NA	A0A2K9KZK0	Tupanvirus	27.5	8.7e-22
WP_075673352.1|265553_266534_-	undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	NA	A8CG95	Salmonella_phage	34.7	1.1e-38
WP_099659662.1|266534_267680_-	UDP-4-amino-4-deoxy-L-arabinose aminotransferase	NA	A0A2K9L470	Tupanvirus	28.8	3.5e-39
WP_075673354.1|267813_268563_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L090	Tupanvirus	28.1	7.1e-09
WP_099659661.1|268564_269575_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA	NA
WP_023582381.1|269954_270251_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	38.9	4.2e-13
WP_075673356.1|270255_272643_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	A0A1L3IZU3	BeAn_58058_virus	27.4	3.5e-09
WP_023582383.1|272657_273641_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	37.7	4.9e-34
WP_120655563.1|273816_273864_-	pheST operon leader peptide PheM	NA	NA	NA	NA	NA
WP_006537111.1|273972_274329_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_004263702.1|274371_274569_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_036937410.1|274663_275203_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	34.4	3.7e-15
>prophage 2
NZ_CP053042	Proteus cibarius strain HNCF44W chromosome, complete genome	3929176	338465	356118	3929176	terminase,protease,portal,head,tail,capsid	Yersinia_phage(15.38%)	19	NA	NA
WP_109418983.1|338465_342224_-	DUF1983 domain-containing protein	NA	Q7Y3Z3	Yersinia_phage	51.6	3.7e-199
WP_159242473.1|342223_342622_-	hypothetical protein	NA	A0A059VK01	Pseudomonas_phage	47.0	2.1e-31
WP_012367795.1|342678_343260_-	hypothetical protein	NA	Q7Y3Z7	Yersinia_phage	50.0	4.0e-52
WP_109418985.1|343259_343856_-	hypothetical protein	NA	S4TSP7	Salmonella_phage	52.8	2.1e-51
WP_109418986.1|343856_347132_-|tail	phage tail tape measure protein	tail	B7SE05	Pseudomonas_virus	46.7	4.9e-54
WP_004242485.1|347258_347450_+	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA	NA
WP_041701216.1|347474_347753_-	DUF4035 domain-containing protein	NA	NA	NA	NA	NA
WP_109418987.1|347749_348166_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109418988.1|348230_348896_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109372567.1|348905_349247_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_159242472.1|349252_349726_-	HK97 gp10 family phage protein	NA	A0A0R6PHU8	Moraxella_phage	31.5	3.3e-12
WP_012367787.1|349715_350045_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_109418990.1|350044_350344_-|head,tail	phage head-tail connector protein	head,tail	K7PKV5	Enterobacterial_phage	65.3	7.4e-34
WP_012367785.1|350382_351549_-|capsid	phage major capsid protein	capsid	F1C582	Cronobacter_phage	79.8	9.6e-170
WP_020946083.1|351552_352221_-|head,protease	HK97 family phage prohead protease	head,protease	K7PM91	Enterobacterial_phage	65.3	1.9e-82
WP_109418991.1|352238_353507_-|portal	phage portal protein	portal	Q77W97	Enterobacteria_phage	80.0	1.9e-200
WP_109418992.1|353506_355240_-|terminase	terminase large subunit	terminase	A0A0U2C138	Paracoccus_phage	46.2	5.8e-147
WP_017628364.1|355193_355661_-|terminase	phage terminase small subunit P27 family	terminase	Q9B019	Phage_GMSE-1	59.7	1.6e-43
WP_004242468.1|355779_356118_-	HNH endonuclease	NA	F1C587	Cronobacter_phage	67.9	5.4e-41
>prophage 3
NZ_CP053042	Proteus cibarius strain HNCF44W chromosome, complete genome	3929176	360055	374824	3929176	integrase,lysis	Morganella_phage(53.33%)	21	358370:358384	382138:382152
358370:358384	attL	TTAAATCATCAATAC	NA	NA	NA	NA
WP_109418994.1|360055_360520_-|lysis	lysis protein	lysis	A0A1P8DTG0	Proteus_phage	49.0	7.5e-25
WP_171880580.1|360522_360681_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109418995.1|360662_361133_-	lysozyme	NA	A0A1W6JNW4	Morganella_phage	64.5	1.2e-51
WP_109418996.1|361132_361402_-	hypothetical protein	NA	A0A2H4FNF0	Salmonella_phage	53.3	2.7e-19
WP_109418997.1|361467_361890_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109372591.1|362348_363023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109418998.1|363111_364284_+	hypothetical protein	NA	A0A1W6JNS5	Morganella_phage	23.0	4.8e-12
WP_098943205.1|364627_365086_-	Hsp20 family protein	NA	NA	NA	NA	NA
WP_004244726.1|365417_365630_-	RNA chaperone/antiterminator CspA	NA	A0A1W6JNX5	Morganella_phage	81.4	3.1e-26
WP_049219743.1|365969_366368_-	antitermination protein	NA	Q8W638	Enterobacteria_phage	54.3	1.6e-31
WP_171880581.1|366395_367421_-	DUF968 domain-containing protein	NA	A0A1W6JP62	Morganella_phage	46.2	1.6e-83
WP_109419000.1|367417_368224_-	KilA-N domain-containing protein	NA	A0A1W6JP13	Morganella_phage	62.5	3.0e-90
WP_049219770.1|368245_368761_-	hypothetical protein	NA	U5P0A0	Shigella_phage	44.2	2.0e-23
WP_017628377.1|369318_369498_-	DUF4222 domain-containing protein	NA	A0A1W6JP38	Morganella_phage	55.2	3.4e-10
WP_072062657.1|369759_370236_-	hypothetical protein	NA	A0A1W6JP72	Morganella_phage	60.4	3.0e-45
WP_109419001.1|370273_370480_-	cell division protein	NA	NA	NA	NA	NA
WP_109419002.1|370580_371213_+	LexA family transcriptional regulator	NA	K7PLZ5	Enterobacterial_phage	44.4	1.5e-39
WP_100157866.1|371491_372016_+	hypothetical protein	NA	A0A1W6JP41	Morganella_phage	61.0	2.3e-54
WP_017628380.1|372101_372353_+	excisionase	NA	NA	NA	NA	NA
WP_109419003.1|372327_373461_+|integrase	phage integrase Arm DNA-binding domain-containing protein	integrase	Q77Z04	Phage_21	72.2	5.0e-155
WP_006537208.1|373570_374824_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	90.7	1.8e-20
382138:382152	attR	GTATTGATGATTTAA	NA	NA	NA	NA
>prophage 4
NZ_CP053042	Proteus cibarius strain HNCF44W chromosome, complete genome	3929176	825156	835997	3929176		Mycobacterium_phage(22.22%)	12	NA	NA
WP_159241856.1|825156_826368_+	D-alanyl-D-alanine carboxypeptidase DacA	NA	B6DZZ7	Stx2-converting_phage	48.1	3.1e-102
WP_036912266.1|826568_826832_+	YbeD family protein	NA	NA	NA	NA	NA
WP_075671560.1|826992_827637_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_075671558.1|827738_828704_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_023581134.1|828717_829092_+	fluoride efflux transporter CrcB	NA	A0A2H4J148	uncultured_Caudovirales_phage	48.0	2.5e-23
WP_023581133.1|829229_829439_-	transcription antiterminator/RNA stability regulator CspE	NA	A0A1W6JNX5	Morganella_phage	74.2	4.5e-22
WP_075671556.1|829636_830110_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A167R6J9	Powai_lake_megavirus	35.8	5.0e-16
WP_075671554.1|830393_830618_+	glutaredoxin family protein	NA	V5UN81	Mycobacterium_phage	45.7	7.8e-12
WP_075671552.1|830629_831049_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	R4JF54	Bacillus_phage	37.6	8.0e-10
WP_099660164.1|831054_833181_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	50.4	1.2e-202
WP_075671548.1|833205_834174_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	72.8	7.5e-136
WP_075671546.1|834797_835997_+	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	NA	G3M9Y6	Bacillus_virus	36.6	2.4e-27
>prophage 5
NZ_CP053042	Proteus cibarius strain HNCF44W chromosome, complete genome	3929176	2845957	2952121	3929176	terminase,holin,protease,lysis,portal,capsid,integrase,plate,tRNA,tail,head	Proteus_phage(30.19%)	106	2873015:2873038	2914008:2914031
WP_075673315.1|2845957_2846437_-|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	tRNA	NA	NA	NA	NA
WP_075673316.1|2846471_2847281_-	TraB/GumN family protein	NA	NA	NA	NA	NA
WP_159242310.1|2847390_2848860_-	YadA-like family protein	NA	NA	NA	NA	NA
WP_159242311.1|2849233_2852176_-	copper-exporting P-type ATPase CopA	NA	A0A218MNH6	uncultured_virus	36.7	5.9e-115
WP_075673930.1|2852308_2852722_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_075673931.1|2852675_2853164_-	NfeD family protein	NA	NA	NA	NA	NA
WP_075673932.1|2853166_2854090_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA	NA
WP_075673933.1|2854127_2854985_-	co-chaperone YbbN	NA	NA	NA	NA	NA
WP_159242312.1|2855069_2855855_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_075673935.1|2855905_2856535_-|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	protease	NA	NA	NA	NA
WP_075673936.1|2856505_2857192_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.7	8.5e-09
WP_156733951.1|2857188_2859630_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_159242313.1|2859718_2861881_-	ornithine decarboxylase	NA	NA	NA	NA	NA
WP_075673939.1|2862057_2863083_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_099660093.1|2863150_2864410_-	MFS transporter	NA	NA	NA	NA	NA
WP_075673941.1|2864533_2865601_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_075673942.1|2865597_2866119_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA	NA
WP_075673943.1|2866253_2866976_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_036934689.1|2866988_2867483_-	peptidylprolyl isomerase B	NA	NA	NA	NA	NA
WP_075673944.1|2867858_2869250_+|tRNA	cysteine--tRNA ligase	tRNA	A0A2K9L6B7	Tupanvirus	32.3	4.7e-38
WP_075673945.1|2869339_2869783_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075673946.1|2870017_2870959_-	1-phosphofructokinase	NA	NA	NA	NA	NA
WP_075673947.1|2871611_2871824_-	ribosome-associated protein YbcJ	NA	NA	NA	NA	NA
WP_075673948.1|2871827_2872700_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	36.8	5.7e-34
2873015:2873038	attL	TGCGGGTCAAGTAACGGGTCAAGT	NA	NA	NA	NA
WP_099660096.1|2873043_2873232_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_159242337.1|2873285_2873723_-	SAM-dependent methyltransferase	NA	A0A1W6JP48	Morganella_phage	77.5	1.5e-62
WP_159242314.1|2873742_2873964_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159242315.1|2873966_2874545_-	hypothetical protein	NA	A0A077SLQ8	Escherichia_phage	44.4	5.3e-36
WP_159242316.1|2874546_2875002_-	hypothetical protein	NA	A0A248SL53	Klebsiella_phage	39.2	2.3e-26
WP_159242317.1|2875010_2875508_-	single-stranded DNA-binding protein	NA	I3PGW4	Xanthomonas_phage	59.4	6.1e-49
WP_159242318.1|2875566_2876394_-	DUF2303 family protein	NA	A0A2R2Z323	Escherichia_phage	56.6	3.8e-80
WP_006533955.1|2876459_2876834_-	hypothetical protein	NA	Q8HAA1	Salmonella_phage	69.7	4.6e-41
WP_099660100.1|2877244_2877739_+	hypothetical protein	NA	A0A077K9U2	Edwardsiella_phage	30.5	8.3e-14
WP_159242319.1|2877950_2878154_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159242320.1|2878506_2879169_-	helix-turn-helix domain-containing protein	NA	A0A1R3Y604	Salmonella_virus	55.6	8.8e-19
WP_109395844.1|2879209_2879422_+	helix-turn-helix domain-containing protein	NA	Q76H55	Enterobacteria_phage	66.7	1.0e-21
WP_036900998.1|2879491_2879950_+	hypothetical protein	NA	K7PJS5	Enterobacterial_phage	50.8	6.0e-27
WP_159242321.1|2880038_2880248_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109391850.1|2880237_2880417_+	DUF4222 domain-containing protein	NA	A0A1W6JP38	Morganella_phage	58.6	1.1e-11
WP_159242322.1|2880426_2881548_+	replication protein 15	NA	K7PLZ7	Enterobacterial_phage	56.0	6.8e-48
WP_159242323.1|2881544_2882183_+	phage N-6-adenine-methyltransferase	NA	Q8HA94	Salmonella_phage	63.1	1.0e-80
WP_159242324.1|2882179_2882572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023582529.1|2882571_2882742_+	Lar family restriction alleviation protein	NA	NA	NA	NA	NA
WP_036904909.1|2883205_2884009_+	KilA-N domain-containing protein	NA	A0A1W6JP13	Morganella_phage	63.1	9.7e-89
WP_159242325.1|2884005_2885031_+	DUF968 domain-containing protein	NA	A0A1W6JP62	Morganella_phage	45.6	2.4e-84
WP_159242326.1|2885058_2885442_+	antitermination protein	NA	A0A088CD47	Shigella_phage	69.8	1.4e-48
WP_036934641.1|2885682_2886849_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	A0A218MNE0	uncultured_virus	43.6	8.6e-86
WP_115370633.1|2886968_2887217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109373189.1|2887545_2887935_+	hypothetical protein	NA	S4TRS4	Salmonella_phage	35.9	2.7e-12
WP_115065560.1|2887931_2888231_+|holin	phage holin family protein	holin	S4TNV9	Salmonella_phage	32.9	1.7e-06
WP_115065559.1|2888208_2888628_+	structural protein	NA	A0A2R3UAM8	Myoviridae_environmental_samples	45.5	4.4e-24
WP_115065558.1|2888827_2889406_+	hypothetical protein	NA	A0A0H4IQ87	Shigella_phage	66.1	4.0e-68
WP_159242338.1|2889476_2889851_+|lysis	lysis protein	lysis	A0A1P8DTG0	Proteus_phage	44.6	1.2e-17
WP_036904935.1|2890097_2890301_-	KTSC domain-containing protein	NA	NA	NA	NA	NA
WP_159242327.1|2891241_2891589_+	HNH endonuclease	NA	A0A1P8DTD1	Proteus_phage	95.7	6.3e-61
WP_017827278.1|2891794_2892253_+|terminase	phage terminase small subunit P27 family	terminase	A0A1J0GV10	Halomonas_phage	55.4	2.1e-27
WP_159242328.1|2892255_2893986_+|terminase	terminase large subunit	terminase	Q8W631	Enterobacteria_phage	60.8	8.5e-207
WP_159242329.1|2894174_2895404_+|portal	phage portal protein	portal	Q8W629	Enterobacteria_phage	73.4	2.2e-177
WP_170832166.1|2895381_2896026_+|head,protease	HK97 family phage prohead protease	head,protease	Q8HAD3	Salmonella_phage	79.9	3.6e-94
WP_159242330.1|2896039_2897248_+|capsid	phage major capsid protein	capsid	M1FPN2	Enterobacteria_phage	68.5	6.9e-155
WP_023582511.1|2897343_2897652_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A1B5FP86	Escherichia_phage	41.2	3.7e-12
WP_023582510.1|2897648_2897972_+|head	phage head closure protein	head	A0A1P8DTK6	Proteus_phage	94.4	5.0e-52
WP_159242331.1|2897968_2898409_+	HK97 gp10 family phage protein	NA	A0A1P8DTH7	Proteus_phage	99.3	1.1e-73
WP_159242332.1|2898405_2898741_+	hypothetical protein	NA	A0A1P8DTJ3	Proteus_phage	96.4	7.7e-56
WP_159242333.1|2898806_2899274_+|tail	phage tail protein	tail	A0A1P8DTJ5	Proteus_phage	99.4	2.8e-80
WP_088495895.1|2899276_2899657_+|tail	phage tail protein	tail	A0A1P8DTJ2	Proteus_phage	100.0	7.9e-65
WP_159242334.1|2899680_2899962_+	DUF4035 domain-containing protein	NA	A0A1P8DTH5	Proteus_phage	93.6	3.1e-42
WP_159242335.1|2899981_2903248_+|tail	phage tail tape measure protein	tail	A0A1P8DTH2	Proteus_phage	82.4	0.0e+00
WP_023582503.1|2903250_2903583_+|tail	phage tail protein	tail	A0A1P8DTI9	Proteus_phage	98.2	2.1e-61
WP_171729888.1|2903576_2904329_+|tail	phage minor tail protein L	tail	A0A1P8DTI3	Proteus_phage	98.8	4.5e-144
WP_159242339.1|2904334_2905042_+	C40 family peptidase	NA	A0A1P8DTI6	Proteus_phage	98.7	6.9e-139
WP_023582500.1|2905132_2905633_+	hypothetical protein	NA	A0A1P8DTJ8	Proteus_phage	100.0	1.9e-87
WP_171880504.1|2905689_2906280_+|tail	tail assembly protein	tail	A0A1P8DTG7	Proteus_phage	98.0	1.5e-102
WP_159287616.1|2906299_2909968_+	DUF1983 domain-containing protein	NA	A0A1P8DTI4	Proteus_phage	91.6	0.0e+00
WP_159242490.1|2909981_2911478_+	hypothetical protein	NA	A0A1P8DTJ0	Proteus_phage	64.3	2.1e-153
WP_159242488.1|2912315_2912690_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087803148.1|2912755_2913982_-|integrase	site-specific integrase	integrase	A0A248SL35	Klebsiella_phage	30.7	1.1e-35
WP_075674158.1|2914679_2915219_+	hypothetical protein	NA	NA	NA	NA	NA
2914008:2914031	attR	TGCGGGTCAAGTAACGGGTCAAGT	NA	NA	NA	NA
WP_075674159.1|2915364_2915673_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_099659264.1|2916745_2917165_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075674162.1|2917656_2919072_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_075674163.1|2919340_2919868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099659265.1|2920387_2920681_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_171880505.1|2920824_2921562_-	ankyrin repeat domain-containing protein	NA	A0A0G2Y7V3	Acanthamoeba_polyphaga_mimivirus	33.1	1.9e-06
WP_075674115.1|2921971_2922592_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159242466.1|2922602_2923985_-	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_075674113.1|2924064_2924499_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_099659268.1|2924501_2925065_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_075674111.1|2925039_2926137_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_159242465.1|2926100_2927864_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_075674109.1|2927896_2929519_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_159242463.1|2929564_2932888_-	type VI secretion protein VasK	NA	NA	NA	NA	NA
WP_171880506.1|2932887_2934285_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075674106.1|2934285_2934540_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_159242460.1|2934578_2936717_-	hypothetical protein	NA	A0A077K801	Ralstonia_phage	30.1	1.4e-30
WP_099659274.1|2936728_2937466_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075674103.1|2937519_2939658_-	hypothetical protein	NA	A0A077K801	Ralstonia_phage	26.2	1.6e-45
WP_159287617.1|2939736_2940507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159287618.1|2940665_2941436_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159287619.1|2941597_2942365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159242456.1|2942364_2944893_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	34.0	7.7e-15
WP_159242454.1|2944889_2947601_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	30.8	8.9e-94
WP_023583757.1|2947886_2948378_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_159242453.1|2948400_2950140_-	OmpA family protein	NA	NA	NA	NA	NA
WP_075674252.1|2950118_2950787_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_075674251.1|2950783_2952121_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
>prophage 6
NZ_CP053042	Proteus cibarius strain HNCF44W chromosome, complete genome	3929176	3384858	3391252	3929176	holin,lysis	Enterobacteria_phage(25.0%)	9	NA	NA
WP_075674218.1|3384858_3385596_-	helix-turn-helix transcriptional regulator	NA	A0A088CBP2	Shigella_phage	46.3	1.8e-57
WP_109849680.1|3385834_3386650_+	antitermination protein	NA	M9NZB0	Enterobacteria_phage	44.8	3.8e-56
WP_075674216.1|3387012_3387321_+|holin	phage holin, lambda family	holin	A0A1P8DTE4	Proteus_phage	55.4	3.1e-27
WP_075674215.1|3387313_3387718_+	structural protein	NA	A0A2I7RXE2	Vibrio_phage	50.8	4.5e-26
WP_075674214.1|3387714_3388164_+|lysis	lysis protein	lysis	M1FJ79	Enterobacteria_phage	31.1	4.3e-09
WP_159241950.1|3388259_3388772_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159241951.1|3388780_3390268_+	DUF3383 family protein	NA	Q6IWV2	Burkholderia_phage	30.8	7.4e-58
WP_075674211.1|3390278_3390731_+	hypothetical protein	NA	B5M9T3	Pseudomonas_phage	33.8	1.1e-12
WP_075674210.1|3390793_3391252_+	hypothetical protein	NA	Q6IWV4	Burkholderia_phage	47.6	7.4e-25
>prophage 7
NZ_CP053042	Proteus cibarius strain HNCF44W chromosome, complete genome	3929176	3394430	3403193	3929176	plate	Pseudomonas_phage(14.29%)	10	NA	NA
WP_075674206.1|3394430_3395243_+	hypothetical protein	NA	W5S7J0	Pseudomonas_phage	29.0	1.5e-15
WP_075674205.1|3395245_3395938_+	hypothetical protein	NA	A1Z003	Burkholderia_virus	35.6	8.2e-36
WP_075674204.1|3395934_3396279_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075674203.1|3396271_3397459_+|plate	baseplate J/gp47 family protein	plate	A0A2H5BG53	Pseudoalteromonas_phage	37.2	6.5e-73
WP_159241953.1|3397455_3398112_+	DUF2612 domain-containing protein	NA	Q6IWQ4	Burkholderia_phage	42.3	2.8e-41
WP_159241954.1|3398117_3399584_+	hypothetical protein	NA	A5X9J3	Aeromonas_virus	62.4	2.9e-22
WP_099660635.1|3399630_3400545_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_036912664.1|3400921_3401101_-	GhoT/OrtT family toxin	NA	NA	NA	NA	NA
WP_159241955.1|3401799_3402342_+	DUF924 family protein	NA	A0A1V0SIY0	Klosneuvirus	35.3	2.0e-21
WP_075674188.1|3402416_3403193_-	dimethyl sulfoxide reductase anchor subunit	NA	A0A077SK59	Escherichia_phage	40.5	6.6e-42
>prophage 1
NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	139490	15740	94348	139490	integrase,transposase	Escherichia_phage(29.41%)	82	37175:37234	95152:95167
WP_171883388.1|15740_16920_+|transposase	IS3 family transposase	transposase	Q716C2	Shigella_phage	67.8	1.1e-120
WP_094963247.1|16959_17787_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072070751.1|18010_18427_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	63.8	6.4e-44
WP_072070750.1|18426_19689_+	translesion error-prone DNA polymerase V subunit UmuC	NA	A0A1W6JNT0	Morganella_phage	65.9	6.7e-161
WP_072070749.1|20040_21087_+	ParB/RepB/Spo0J family partition protein	NA	D5LGX9	Escherichia_phage	31.8	1.0e-29
WP_023159966.1|21089_21434_+	single-stranded DNA-binding protein	NA	A0A291LA01	Bordetella_phage	39.3	3.6e-08
WP_159242432.1|21426_21849_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048821774.1|21858_22251_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159242433.1|22531_23011_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_048822182.1|23019_23598_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048821769.1|24358_24727_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048821767.1|24824_25052_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023159958.1|25168_25792_-	AAA family ATPase	NA	D4HTX7	Vibrio_phage	35.4	1.6e-22
WP_023159984.1|26084_26330_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_023159957.1|26329_26662_+	endoribonuclease MazF	NA	A0A1S5SEX8	Streptococcus_phage	32.4	5.6e-06
WP_048821763.1|26692_27073_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072022937.1|27161_27302_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA	NA
WP_048821762.1|27621_28080_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048821760.1|28178_28433_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048821758.1|28471_28741_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048821757.1|29034_29988_+|integrase	site-specific integrase	integrase	A0A1P8DJ76	Virus_Rctr85	29.2	9.6e-27
WP_001029679.1|30256_31078_+	TnsA endonuclease N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_000267723.1|31064_33173_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_001276994.1|33169_34837_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_071538080.1|35639_37214_-	PAS domain-containing methyl-accepting chemotaxis protein	NA	A0A1B0V854	Salmonella_phage	99.4	2.8e-87
37175:37234	attL	GGGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCCCCTTTTGCTGATGGAGCT	NA	NA	NA	NA
WP_001067855.1|37238_37943_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
37175:37234	attL	GGGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCCCCTTTTGCTGATGGAGCT	NA	NA	NA	NA
WP_000845039.1|38217_39231_-|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
WP_063840321.1|39522_40077_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA	NA
WP_001749986.1|40173_40626_+	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA	NA
WP_000679427.1|40848_41196_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_000259031.1|41189_42029_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
WP_000050481.1|42433_43975_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_004201168.1|45053_45692_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_004201167.1|45696_46062_-	bleomycin binding protein Ble-MBL	NA	NA	NA	NA	NA
WP_004201164.1|46065_46878_-	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA	NA
WP_000376623.1|47810_48311_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000983249.1|48845_49631_-	ATP-binding protein	NA	A0A2L1IVB6	Escherichia_phage	35.0	3.3e-33
WP_001324342.1|49617_51141_-|transposase	IS21-like element IS1326 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	24.2	1.2e-15
WP_000287615.1|51263_52808_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	34.6	1.0e-38
WP_000344784.1|52858_53719_-	TniB family NTP-binding protein	NA	NA	NA	NA	NA
WP_001067855.1|54209_54914_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000018329.1|55064_55880_+	aminoglycoside O-phosphotransferase APH(3')-Ia	NA	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	100.0	6.1e-163
54919:55740	attR	AGCTCCATCAGCAAAAGGGGATGATAAGTTTATCACCACCGACTATTTGCAACAGTGCCCTCTGATGTTACATTGCACAAGATAAAAATATATCATCATGAACAATAAAACTGTCTGCTTACATAAACAGTAATACAAGGGGTGTTATGAGCCATATTCAACGGGAAACGTCTTGCTCGAGGCCGCGATTAAATTCCAACATGGATGCTGATTTATATGGGTATAAATGGGCTCGCGATAATGTCGGGCAATCAGGTGCGACAATCTATCGATTGTATGGGAAGCCCGATGCGCCAGAGTTGTTTCTGAAACATGGCAAAGGTAGCGTTGCCAATGATGTTACAGATGAGATGGTCAGACTAAACTGGCTGACGGAATTTATGCCTCTTCCGACCATCAAGCATTTTATCCGTACTCCTGATGATGCATGGTTACTCACCACTGCGATCCCCGGGAAAACAGCATTCCAGGTATTAGAAGAATATCCTGATTCAGGTGAAAATATTGTTGATGCGCTGGCAGTGTTCCTGCGCCGGTTGCATTCGATTCCTGTTTGTAATTGTCCTTTTAACAGCGATCGCGTATTTCGTCTCGCTCAGGCGCAATCACGAATGAATAACGGTTTGGTTGATGCGAGTGATTTTGATGACGAGCGTAATGGCTGGCCTGTTGAACAAGTCTGGAAAGAAATGCATAAGCTTTTGCCATTCTCACCGGATTCAGTCGTCACTCATGGTGATTTCTCACTTGATAACCTTATTTTTGACGAGGGGAAATTAATAGGTTGTATTGATGTTGGACGAGTCGGAATCGCAGACCGAT	NA	NA	NA	NA
WP_001067855.1|56069_56774_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
54919:55740	attR	AGCTCCATCAGCAAAAGGGGATGATAAGTTTATCACCACCGACTATTTGCAACAGTGCCCTCTGATGTTACATTGCACAAGATAAAAATATATCATCATGAACAATAAAACTGTCTGCTTACATAAACAGTAATACAAGGGGTGTTATGAGCCATATTCAACGGGAAACGTCTTGCTCGAGGCCGCGATTAAATTCCAACATGGATGCTGATTTATATGGGTATAAATGGGCTCGCGATAATGTCGGGCAATCAGGTGCGACAATCTATCGATTGTATGGGAAGCCCGATGCGCCAGAGTTGTTTCTGAAACATGGCAAAGGTAGCGTTGCCAATGATGTTACAGATGAGATGGTCAGACTAAACTGGCTGACGGAATTTATGCCTCTTCCGACCATCAAGCATTTTATCCGTACTCCTGATGATGCATGGTTACTCACCACTGCGATCCCCGGGAAAACAGCATTCCAGGTATTAGAAGAATATCCTGATTCAGGTGAAAATATTGTTGATGCGCTGGCAGTGTTCCTGCGCCGGTTGCATTCGATTCCTGTTTGTAATTGTCCTTTTAACAGCGATCGCGTATTTCGTCTCGCTCAGGCGCAATCACGAATGAATAACGGTTTGGTTGATGCGAGTGATTTTGATGACGAGCGTAATGGCTGGCCTGTTGAACAAGTCTGGAAAGAAATGCATAAGCTTTTGCCATTCTCACCGGATTCAGTCGTCACTCATGGTGATTTCTCACTTGATAACCTTATTTTTGACGAGGGGAAATTAATAGGTTGTATTGATGTTGGACGAGTCGGAATCGCAGACCGAT	NA	NA	NA	NA
WP_140173007.1|56809_57121_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000155092.1|57310_58195_-	Mph(E) family macrolide 2'-phosphotransferase	NA	NA	NA	NA	NA
WP_000052512.1|58250_59726_-	ABC-F type ribosomal protection protein Msr(E)	NA	A0A1B0RXA0	Streptococcus_phage	59.0	2.3e-160
WP_001067855.1|60175_60880_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_012579084.1|61004_61661_-	quinolone resistance pentapeptide repeat protein QnrA1	NA	NA	NA	NA	NA
WP_000050481.1|61924_63466_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_000259031.1|63870_64710_-	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
WP_000679427.1|64703_65051_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_001206356.1|65214_66006_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
WP_001336345.1|66011_66302_-	DUF1010 domain-containing protein	NA	NA	NA	NA	NA
WP_001083725.1|66413_66911_-	trimethoprim-resistant dihydrofolate reductase DfrA12	NA	A0A0A0PL85	Bacillus_phage	40.9	7.5e-23
WP_000845039.1|67055_68069_+|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
WP_000454193.1|68271_68622_+	DUF3330 domain-containing protein	NA	NA	NA	NA	NA
WP_000147567.1|68747_69308_+	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	86.2	4.0e-49
WP_015344976.1|69310_72262_+|transposase	Tn3-like element TnAs3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	73.5	0.0e+00
WP_046788546.1|72270_72672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001067784.1|72756_73461_-|transposase	IS6-like element IS1006 family transposase	transposase	A0A077SL39	Escherichia_phage	85.8	1.9e-120
WP_001447541.1|74385_75270_+	DUF3363 domain-containing protein	NA	NA	NA	NA	NA
WP_000214122.1|75492_76707_+	chloramphenicol/florfenicol efflux MFS transporter FloR	NA	S4TR35	Salmonella_phage	28.7	1.2e-18
WP_001255015.1|76734_77040_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001120888.1|77151_78645_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_001445143.1|78675_78927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000251875.1|78820_79123_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_001043260.1|79209_80025_-	sulfonamide-resistant dihydropteroate synthase Sul2	NA	A0A0B5J4J5	Pandoravirus	27.6	5.9e-09
WP_085940648.1|80114_81204_+|transposase	IS4 family transposase ISAba1	transposase	NA	NA	NA	NA
WP_170628443.1|81401_81761_-	phenol hydroxylase	NA	NA	NA	NA	NA
WP_000602738.1|83697_84450_+|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	44.7	2.4e-41
WP_000742814.1|84871_85897_-	aminoglycoside O-phosphotransferase APH(4)-Ia	NA	NA	NA	NA	NA
WP_001199192.1|86125_86902_-	aminoglycoside N-acetyltransferase AAC(3)-IVa	NA	NA	NA	NA	NA
WP_001067855.1|87015_87720_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000184001.1|87825_89031_-	chromate efflux transporter	NA	NA	NA	NA	NA
WP_000376616.1|89186_89390_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000259031.1|89517_90357_-	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
WP_000679427.1|90350_90698_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_001206316.1|90861_91653_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA	NA
WP_000777554.1|91669_92143_-	trimethoprim-resistant dihydrofolate reductase DfrA1	NA	G3MBI7	Bacillus_virus	32.1	3.7e-19
WP_070342364.1|92139_92985_-	lincosamide nucleotidyltransferase Lnu(F)	NA	NA	NA	NA	NA
WP_000071896.1|93370_93907_+|integrase	class 2 integron integrase IntI2	integrase	A0A1P8DJJ6	Virus_Rctr41k	34.4	6.9e-14
WP_000497519.1|94021_94348_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	52.0	2.1e-18
95152:95167	attR	TTGTCATTTTTAATTT	NA	NA	NA	NA
