assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013170705.1_ASM1317070v1	NZ_CP033334	Mesorhizobium loti strain NZP2042 chromosome, complete genome	1	382019-382110	1	CRISPRCasFinder	no		WYL,csa3,DEDDh,PD-DExK,cas3	Orphan	CGCCAGACCTGTCGCAACCGCCGAGCTTC	29	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,PD-DExK,cas3	NA|257aa|up_6|NZ_CP033334.1_370327_371098_-,NA|178aa|up_3|NZ_CP033334.1_377345_377879_-,NA|129aa|down_4|NZ_CP033334.1_386393_386780_-	NA|427aa|up_9|NZ_CP033334.1_368242_369523_-	cd05304, Rubrum_tdh, Rubrum transdehydrogenase NAD-binding and catalytic domains	NA|75aa|up_8|NZ_CP033334.1_369610_369835_-	pfam07835, COX4_pro_2, Bacterial aa3 type cytochrome c oxidase subunit IV	NA|50aa|up_7|NZ_CP033334.1_370015_370165_-	pfam11295, DUF3096, Protein of unknown function (DUF3096)	NA|257aa|up_6|NZ_CP033334.1_370327_371098_-	NA	NA|772aa|up_5|NZ_CP033334.1_371244_373560_-	COG5001, COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms]	NA|1160aa|up_4|NZ_CP033334.1_373651_377131_-	PRK09193, PRK09193, indolepyruvate ferredoxin oxidoreductase; Validated	NA|178aa|up_3|NZ_CP033334.1_377345_377879_-	NA	NA|204aa|up_2|NZ_CP033334.1_377871_378483_-	COG5516, COG5516, Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding [General function prediction only]	NA|302aa|up_1|NZ_CP033334.1_378631_379537_+	COG0559, LivH, Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism]	NA|195aa|up_0|NZ_CP033334.1_379744_380329_+	COG4665, FcbT2, TRAP-type mannitol/chloroaromatic compound transport system, small permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|343aa|down_0|NZ_CP033334.1_382129_383158_+	cd08234, threonine_DH_like, L-threonine dehydrogenase	NA|369aa|down_1|NZ_CP033334.1_383424_384531_-	COG4663, FcbT1, TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|258aa|down_2|NZ_CP033334.1_384795_385569_+	COG2071, COG2071, Predicted glutamine amidotransferases [General function prediction only]	NA|224aa|down_3|NZ_CP033334.1_385605_386277_-	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane]	NA|129aa|down_4|NZ_CP033334.1_386393_386780_-	NA	NA|328aa|down_5|NZ_CP033334.1_386863_387847_-	cd12156, HPPR, Hydroxy(phenyl)pyruvate Reductase, D-isomer-specific 2-hydroxyacid-related dehydrogenase	NA|341aa|down_6|NZ_CP033334.1_387843_388866_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|295aa|down_7|NZ_CP033334.1_388944_389829_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|136aa|down_8|NZ_CP033334.1_390027_390435_-	COG4954, COG4954, Uncharacterized protein conserved in bacteria [Function unknown]	NA|306aa|down_9|NZ_CP033334.1_390441_391359_+	pfam02311, AraC_binding, AraC-like ligand binding domain
GCF_013170705.1_ASM1317070v1	NZ_CP033334	Mesorhizobium loti strain NZP2042 chromosome, complete genome	2	4957620-4957707	2	CRISPRCasFinder	no		WYL,csa3,DEDDh,PD-DExK,cas3	Orphan	GCAAAACCGGATTCCACTTTTGCTGATCGCG	31	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,PD-DExK,cas3	NA,NA	NA|423aa|up_9|NZ_CP033334.1_4947259_4948528_-	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|252aa|up_8|NZ_CP033334.1_4948553_4949309_-	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|506aa|up_7|NZ_CP033334.1_4949336_4950854_-	PRK11814, PRK11814, cysteine desulfurase activator complex subunit SufB; Provisional	NA|388aa|up_6|NZ_CP033334.1_4951041_4952205_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|225aa|up_5|NZ_CP033334.1_4952446_4953121_+	COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|217aa|up_4|NZ_CP033334.1_4953142_4953793_+	COG2808, PaiB, Transcriptional regulator [Transcription]	NA|274aa|up_3|NZ_CP033334.1_4953811_4954633_-	cd03389, PAP2_lipid_A_1_phosphatase, PAP2_like proteins, Lipid A 1-phosphatase subfamily	NA|550aa|up_2|NZ_CP033334.1_4954658_4956308_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|111aa|up_1|NZ_CP033334.1_4956348_4956681_-	COG3952, COG3952, Predicted membrane protein [Function unknown]	NA|245aa|up_0|NZ_CP033334.1_4956673_4957408_-	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|418aa|down_0|NZ_CP033334.1_4957777_4959031_+	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|1127aa|down_1|NZ_CP033334.1_4959129_4962510_-	pfam13116, DUF3971, Protein of unknown function	NA|156aa|down_2|NZ_CP033334.1_4962605_4963073_+	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|381aa|down_3|NZ_CP033334.1_4963104_4964247_-	COG5653, COG5653, Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane]	NA|332aa|down_4|NZ_CP033334.1_4964243_4965239_-	COG3000, ERG3, Sterol desaturase [Lipid metabolism]	NA|435aa|down_5|NZ_CP033334.1_4965542_4966847_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|413aa|down_6|NZ_CP033334.1_4966939_4968178_-	cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family	NA|393aa|down_7|NZ_CP033334.1_4968164_4969343_-	TIGR02993, ectoine_eutD, ectoine utilization protein EutD	NA|389aa|down_8|NZ_CP033334.1_4969561_4970728_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|255aa|down_9|NZ_CP033334.1_4970724_4971489_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
GCF_013170705.1_ASM1317070v1	NZ_CP033334	Mesorhizobium loti strain NZP2042 chromosome, complete genome	3	5140356-5140426	3	CRISPRCasFinder	no		WYL,csa3,DEDDh,PD-DExK,cas3	Orphan	AAACATCGGGACCACGGGTGTCC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,PD-DExK,cas3	NA|207aa|up_3|NZ_CP033334.1_5138586_5139207_-,NA|46aa|up_1|NZ_CP033334.1_5139567_5139705_+,NA|61aa|up_0|NZ_CP033334.1_5139701_5139884_+,NA|102aa|down_0|NZ_CP033334.1_5140492_5140798_+,NA|83aa|down_1|NZ_CP033334.1_5140931_5141180_+,NA|124aa|down_4|NZ_CP033334.1_5143512_5143884_+,NA|181aa|down_5|NZ_CP033334.1_5143885_5144428_+,NA|172aa|down_7|NZ_CP033334.1_5145095_5145611_-,NA|73aa|down_8|NZ_CP033334.1_5145616_5145835_-,NA|73aa|down_9|NZ_CP033334.1_5145848_5146067_-	NA|501aa|up_9|NZ_CP033334.1_5130207_5131710_-	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|474aa|up_8|NZ_CP033334.1_5131992_5133414_+	PRK10504, PRK10504, putative transporter; Provisional	NA|266aa|up_7|NZ_CP033334.1_5133419_5134217_-	COG0293, FtsJ, 23S rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|455aa|up_6|NZ_CP033334.1_5134213_5135578_-	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]	NA|311aa|up_5|NZ_CP033334.1_5135989_5136922_+	COG0392, COG0392, Predicted integral membrane protein [Function unknown]	NA|415aa|up_4|NZ_CP033334.1_5137269_5138514_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|207aa|up_3|NZ_CP033334.1_5138586_5139207_-	NA	NA|66aa|up_2|NZ_CP033334.1_5139373_5139571_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|46aa|up_1|NZ_CP033334.1_5139567_5139705_+	NA	NA|61aa|up_0|NZ_CP033334.1_5139701_5139884_+	NA	NA|102aa|down_0|NZ_CP033334.1_5140492_5140798_+	NA	NA|83aa|down_1|NZ_CP033334.1_5140931_5141180_+	NA	NA|253aa|down_2|NZ_CP033334.1_5141451_5142210_+	TIGR01543, Putative_prohead_protease, phage prohead protease, HK97 family	NA|390aa|down_3|NZ_CP033334.1_5142212_5143382_+	TIGR01554, prophage_Lp3_protein_18, phage major capsid protein, HK97 family	NA|124aa|down_4|NZ_CP033334.1_5143512_5143884_+	NA	NA|181aa|down_5|NZ_CP033334.1_5143885_5144428_+	NA	NA|187aa|down_6|NZ_CP033334.1_5144532_5145093_+	PRK11892, PRK11892, pyruvate dehydrogenase subunit beta; Provisional	NA|172aa|down_7|NZ_CP033334.1_5145095_5145611_-	NA	NA|73aa|down_8|NZ_CP033334.1_5145616_5145835_-	NA	NA|73aa|down_9|NZ_CP033334.1_5145848_5146067_-	NA
GCF_013170705.1_ASM1317070v1	NZ_CP033334	Mesorhizobium loti strain NZP2042 chromosome, complete genome	4	5341830-5342044	4	CRISPRCasFinder	no		WYL,csa3,DEDDh,PD-DExK,cas3	Orphan	GCCAGGCAATTGGCTTTCCGTCCGCTTCGCGGACCGGTTCCCTGCCCTTCGCT	53	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,PD-DExK,cas3	NA|68aa|up_6|NZ_CP033334.1_5336902_5337106_-,NA|157aa|down_9|NZ_CP033334.1_5349985_5350456_+	NA|703aa|up_9|NZ_CP033334.1_5331956_5334065_-	cd02766, MopB_3, The MopB_3 CD includes a group of related uncharacterized bacterial and archaeal molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site	NA|626aa|up_8|NZ_CP033334.1_5334277_5336155_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|150aa|up_7|NZ_CP033334.1_5336291_5336741_-	COG4957, COG4957, Predicted transcriptional regulator [Transcription]	NA|68aa|up_6|NZ_CP033334.1_5336902_5337106_-	NA	NA|308aa|up_5|NZ_CP033334.1_5337098_5338022_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|279aa|up_4|NZ_CP033334.1_5338067_5338904_-	pfam14527, LAGLIDADG_WhiA, WhiA LAGLIDADG-like domain	NA|320aa|up_3|NZ_CP033334.1_5339015_5339975_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|171aa|up_2|NZ_CP033334.1_5340042_5340555_-	COG2318, DinB, Uncharacterized protein conserved in bacteria [Function unknown]	NA|231aa|up_1|NZ_CP033334.1_5340621_5341314_+	cd03202, GST_C_etherase_LigE, C-terminal, alpha helical domain of Beta etherase LigE	NA|91aa|up_0|NZ_CP033334.1_5341396_5341669_-	pfam11154, DUF2934, Protein of unknown function (DUF2934)	NA|141aa|down_0|NZ_CP033334.1_5342188_5342611_+	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|255aa|down_1|NZ_CP033334.1_5342672_5343437_-	COG3126, COG3126, Uncharacterized protein conserved in bacteria [Function unknown]	NA|160aa|down_2|NZ_CP033334.1_5343542_5344022_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|86aa|down_3|NZ_CP033334.1_5344027_5344285_-	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism]	NA|199aa|down_4|NZ_CP033334.1_5344286_5344883_-	TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|690aa|down_5|NZ_CP033334.1_5344980_5347050_-	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|254aa|down_6|NZ_CP033334.1_5347046_5347808_-	PRK09134, PRK09134, SDR family oxidoreductase	NA|219aa|down_7|NZ_CP033334.1_5348221_5348878_+	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane]	NA|199aa|down_8|NZ_CP033334.1_5348940_5349537_-	cd03205, GST_C_6, C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases	NA|157aa|down_9|NZ_CP033334.1_5349985_5350456_+	NA
