assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013167595.1_ASM1316759v1	NZ_CP038349	Escherichia coli O157:H7 strain F8952 chromosome, complete genome	1	1095154-1095242	1	CRISPRCasFinder	no	cas3	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Unclear	GAGTTCCCCGCGCCAGCGGGGATAAACC	28	0	0	NA	NA	I-E	1	1	Unclear	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol,RT	NA,NA	NA|83aa|up_9|NZ_CP038349.1_1085630_1085879_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_8|NZ_CP038349.1_1085878_1086214_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_7|NZ_CP038349.1_1086284_1087076_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_6|NZ_CP038349.1_1087303_1088941_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_5|NZ_CP038349.1_1089028_1090327_+	PRK00077, eno, enolase; Provisional	NA|305aa|up_4|NZ_CP038349.1_1090386_1091301_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|383aa|up_3|NZ_CP038349.1_1091297_1092446_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|225aa|up_2|NZ_CP038349.1_1092679_1093354_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|207aa|up_1|NZ_CP038349.1_1093367_1093988_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|224aa|up_0|NZ_CP038349.1_1094142_1094814_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP038349.1_1095877_1097356_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP038349.1_1097382_1098660_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP038349.1_1098978_1099764_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP038349.1_1099833_1101288_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|260aa|down_4|NZ_CP038349.1_1102695_1103475_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|192aa|down_5|NZ_CP038349.1_1104479_1105055_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_6|NZ_CP038349.1_1105071_1105332_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_7|NZ_CP038349.1_1105322_1106594_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|121aa|down_8|NZ_CP038349.1_1106671_1107034_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_9|NZ_CP038349.1_1107352_1109152_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit
GCF_013167595.1_ASM1316759v1	NZ_CP038349	Escherichia coli O157:H7 strain F8952 chromosome, complete genome	2	1120934-1121146	1,1,2	PILER-CR,CRT,CRISPRCasFinder	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Type I-E	TGTGTTCCCCGCGCCAGCGGGGATAAACCG,TGTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	30,30,29	0	0	NA	NA	I-E:I-E:I-E	2,3,3	3	TypeI-E	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol,RT	NA,NA	NA|245aa|up_9|NZ_CP038349.1_1110937_1111672_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP038349.1_1111935_1112088_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP038349.1_1112279_1114979_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP038349.1_1115076_1116639_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP038349.1_1116635_1117172_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|NZ_CP038349.1_1117183_1118239_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP038349.1_1118249_1118996_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP038349.1_1118977_1119628_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP038349.1_1119624_1120548_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP038349.1_1120544_1120838_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP038349.1_1121227_1122265_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP038349.1_1122516_1123425_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP038349.1_1123426_1124854_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP038349.1_1124853_1125459_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP038349.1_1125508_1125832_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP038349.1_1126025_1126337_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP038349.1_1126355_1127066_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP038349.1_1127065_1127545_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP038349.1_1127541_1128591_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP038349.1_1128571_1129333_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_013167595.1_ASM1316759v1	NZ_CP038349	Escherichia coli O157:H7 strain F8952 chromosome, complete genome	3	1646291-1646396	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Orphan	CCGAGCCGTAGGCCGGATTAGGCGTT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol,RT	NA|357aa|up_5|NZ_CP038349.1_1640270_1641341_-,NA	NA|420aa|up_9|NZ_CP038349.1_1634457_1635717_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_8|NZ_CP038349.1_1635706_1637335_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_7|NZ_CP038349.1_1637607_1638966_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_6|NZ_CP038349.1_1638970_1640047_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|357aa|up_5|NZ_CP038349.1_1640270_1641341_-	NA	NA|293aa|up_4|NZ_CP038349.1_1641804_1642683_-	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|397aa|up_3|NZ_CP038349.1_1642834_1644025_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|217aa|up_2|NZ_CP038349.1_1644105_1644756_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP038349.1_1644809_1645064_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP038349.1_1645063_1646194_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP038349.1_1646420_1648706_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP038349.1_1649401_1653154_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP038349.1_1653294_1654017_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP038349.1_1654163_1656791_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|543aa|down_4|NZ_CP038349.1_1656998_1658627_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP038349.1_1658623_1659247_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|NZ_CP038349.1_1659390_1663785_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|265aa|down_7|NZ_CP038349.1_1663785_1664580_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|261aa|down_8|NZ_CP038349.1_1664652_1665435_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_9|NZ_CP038349.1_1665439_1666216_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_013167595.1_ASM1316759v1	NZ_CP038349	Escherichia coli O157:H7 strain F8952 chromosome, complete genome	4	2125335-2125484	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Unclear	TACCAGAGATAGCGAACCGTAGGTCGGAAAAGGCGCTCGCGCCGCATCCGACA	53	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol,RT	NA|22aa|up_2|NZ_CP038349.1_2123422_2123488_+,NA	NA|273aa|up_9|NZ_CP038349.1_2117389_2118208_-	PRK10302, PRK10302, hypothetical protein; Provisional	NA|189aa|up_8|NZ_CP038349.1_2118204_2118771_-	PRK11440, PRK11440, putative hydrolase; Provisional	NA|591aa|up_7|NZ_CP038349.1_2119080_2120853_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|151aa|up_6|NZ_CP038349.1_2120970_2121423_+	PRK09438, nudB, dihydroneopterin triphosphate pyrophosphatase; Provisional	NA|247aa|up_5|NZ_CP038349.1_2121451_2122192_+	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator	NA|174aa|up_4|NZ_CP038349.1_2122226_2122748_+	TIGR00228, Crossover_junction_endodeoxyribonuclease_RuvC, crossover junction endodeoxyribonuclease RuvC	NA|201aa|up_3|NZ_CP038349.1_2122749_2123352_-	PRK11470, PRK11470, YebB family permuted papain-like enzyme	NA|22aa|up_2|NZ_CP038349.1_2123422_2123488_+	NA	NA|204aa|up_1|NZ_CP038349.1_2123626_2124238_+	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|337aa|up_0|NZ_CP038349.1_2124246_2125257_+	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB	NA|262aa|down_0|NZ_CP038349.1_2125502_2126288_-	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB	NA|252aa|down_1|NZ_CP038349.1_2126284_2127040_-	PRK09544, znuC, high-affinity zinc transporter ATPase; Reviewed	NA|311aa|down_2|NZ_CP038349.1_2127118_2128051_+	PRK09545, znuA, zinc ABC transporter substrate-binding protein ZnuA	NA|441aa|down_3|NZ_CP038349.1_2128066_2129389_+	PRK11649, PRK11649, putative peptidase; Provisional	NA|324aa|down_4|NZ_CP038349.1_2129508_2130480_+	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	NA|481aa|down_5|NZ_CP038349.1_2130610_2132053_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|290aa|down_6|NZ_CP038349.1_2132180_2133050_-	PRK11302, PRK11302, DNA-binding transcriptional regulator HexR; Provisional	NA|492aa|down_7|NZ_CP038349.1_2133387_2134863_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|604aa|down_8|NZ_CP038349.1_2135097_2136909_+	PRK09054, PRK09054, phosphogluconate dehydratase; Validated	NA|214aa|down_9|NZ_CP038349.1_2136945_2137587_+	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
GCF_013167595.1_ASM1316759v1	NZ_CP038349	Escherichia coli O157:H7 strain F8952 chromosome, complete genome	5	2323944-2324067	5	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol,RT	NA,NA|30aa|down_7|NZ_CP038349.1_2332963_2333053_+	NA|471aa|up_9|NZ_CP038349.1_2313397_2314810_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP038349.1_2315366_2315576_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP038349.1_2316031_2316658_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP038349.1_2316678_2318781_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP038349.1_2318793_2319432_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP038349.1_2319495_2320164_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP038349.1_2320160_2320946_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP038349.1_2320949_2321762_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP038349.1_2321773_2323378_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP038349.1_2323503_2323809_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP038349.1_2324381_2325638_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP038349.1_2325678_2327052_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP038349.1_2327266_2327908_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP038349.1_2327947_2329096_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP038349.1_2329386_2330598_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP038349.1_2330710_2331643_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP038349.1_2331639_2332665_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP038349.1_2332963_2333053_+	NA	NA|390aa|down_8|NZ_CP038349.1_2333218_2334388_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP038349.1_2334533_2335115_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_013167595.1_ASM1316759v1	NZ_CP038349	Escherichia coli O157:H7 strain F8952 chromosome, complete genome	6	3037109-3037222	2	PILER-CR	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Orphan	TTTTTTTACCTGATTCGGGTAAA	23	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol,RT	NA|47aa|up_9|NZ_CP038349.1_3031568_3031709_-,NA|41aa|up_3|NZ_CP038349.1_3035058_3035181_-,NA|101aa|up_1|NZ_CP038349.1_3035645_3035948_-,NA|79aa|down_0|NZ_CP038349.1_3037570_3037807_+	NA|47aa|up_9|NZ_CP038349.1_3031568_3031709_-	NA	NA|121aa|up_8|NZ_CP038349.1_3031705_3032068_-	PRK09786, PRK09786, endodeoxyribonuclease RUS; Reviewed	NA|97aa|up_7|NZ_CP038349.1_3032064_3032355_-	pfam07102, DUF1364, Protein of unknown function (DUF1364)	NA|57aa|up_6|NZ_CP038349.1_3032347_3032518_-	PRK09689, PRK09689, prophage protein NinE; Provisional	NA|152aa|up_5|NZ_CP038349.1_3032517_3032973_-	PRK09741, PRK09741, hypothetical protein; Provisional	NA|509aa|up_4|NZ_CP038349.1_3033474_3035001_-	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain	NA|41aa|up_3|NZ_CP038349.1_3035058_3035181_-	NA	NA|111aa|up_2|NZ_CP038349.1_3035245_3035578_-	PRK09541, emrE, EmrE family multidrug efflux SMR transporter	NA|101aa|up_1|NZ_CP038349.1_3035645_3035948_-	NA	NA|234aa|up_0|NZ_CP038349.1_3035944_3036646_-	pfam06992, Phage_lambda_P, Replication protein P	NA|79aa|down_0|NZ_CP038349.1_3037570_3037807_+	NA	NA|381aa|down_1|NZ_CP038349.1_3037796_3038939_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|417aa|down_2|NZ_CP038349.1_3039052_3040303_-	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed	NA|218aa|down_3|NZ_CP038349.1_3040474_3041128_+	PRK11394, PRK11394, 23S rRNA pseudouridine(2457) synthase RluE	NA|154aa|down_4|NZ_CP038349.1_3041137_3041599_+	cd03675, Nudix_Hydrolase_2, Contains a crystal structure of the Nudix hydrolase from Nitrosomonas europaea, which has an unknown function	NA|369aa|down_5|NZ_CP038349.1_3041652_3042759_+	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|214aa|down_6|NZ_CP038349.1_3042794_3043436_+	PRK00218, PRK00218, lysogenization regulator HflD	NA|457aa|down_7|NZ_CP038349.1_3043439_3044810_+	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|224aa|down_8|NZ_CP038349.1_3044978_3045650_+	PRK10816, PRK10816, two-component system response regulator PhoP	NA|487aa|down_9|NZ_CP038349.1_3045649_3047110_+	PRK10815, PRK10815, two-component system sensor histidine kinase PhoQ
GCF_013167595.1_ASM1316759v1	NZ_CP038349	Escherichia coli O157:H7 strain F8952 chromosome, complete genome	7	4587994-4588128	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Orphan	GGCCTACACGCTGCAATTTTGTAGGCCGGATAAGCAACGCGCATCCGGCA	50	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol,RT	NA|190aa|up_7|NZ_CP038349.1_4578382_4578952_-,NA|251aa|down_4|NZ_CP038349.1_4595421_4596174_-	NA|44aa|up_9|NZ_CP038349.1_4576275_4576407_-	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|553aa|up_8|NZ_CP038349.1_4576495_4578154_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|190aa|up_7|NZ_CP038349.1_4578382_4578952_-	NA	NA|328aa|up_6|NZ_CP038349.1_4579323_4580307_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|NZ_CP038349.1_4580282_4581893_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|NZ_CP038349.1_4581876_4582575_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|NZ_CP038349.1_4582661_4583426_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|NZ_CP038349.1_4583511_4584390_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|NZ_CP038349.1_4584728_4586429_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|NZ_CP038349.1_4586439_4587942_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|NZ_CP038349.1_4588141_4588837_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|784aa|down_1|NZ_CP038349.1_4588911_4591263_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|NZ_CP038349.1_4591426_4594333_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|NZ_CP038349.1_4594344_4595004_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|251aa|down_4|NZ_CP038349.1_4595421_4596174_-	NA	NA|272aa|down_5|NZ_CP038349.1_4596468_4597284_-	PRK09430, djlA, co-chaperone DjlA	NA|785aa|down_6|NZ_CP038349.1_4597538_4599893_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_7|NZ_CP038349.1_4599945_4601232_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_8|NZ_CP038349.1_4601231_4602221_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_9|NZ_CP038349.1_4602217_4603039_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
GCF_013167595.1_ASM1316759v1	NZ_CP038349	Escherichia coli O157:H7 strain F8952 chromosome, complete genome	8	4818068-4818217	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol,RT	NA,NA|591aa|down_6|NZ_CP038349.1_4825314_4827087_-	NA|190aa|up_9|NZ_CP038349.1_4804279_4804849_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|156aa|up_8|NZ_CP038349.1_4805041_4805509_+	COG4333, COG4333, Uncharacterized protein conserved in bacteria [Function unknown]	NA|111aa|up_7|NZ_CP038349.1_4806512_4806845_+	pfam07978, NIPSNAP, NIPSNAP	NA|126aa|up_6|NZ_CP038349.1_4806966_4807344_+	pfam13711, DUF4160, Domain of unknown function (DUF4160)	NA|405aa|up_5|NZ_CP038349.1_4807526_4808740_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|650aa|up_4|NZ_CP038349.1_4808939_4810889_-	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|340aa|up_3|NZ_CP038349.1_4811259_4812279_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|361aa|up_2|NZ_CP038349.1_4814070_4815153_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP038349.1_4815152_4816253_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP038349.1_4816519_4818031_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP038349.1_4818384_4818828_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP038349.1_4818827_4821683_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP038349.1_4821737_4822934_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP038349.1_4823126_4823630_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP038349.1_4823675_4824092_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP038349.1_4824253_4825258_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|591aa|down_6|NZ_CP038349.1_4825314_4827087_-	NA	NA|151aa|down_7|NZ_CP038349.1_4827209_4827662_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_8|NZ_CP038349.1_4827806_4828400_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|238aa|down_9|NZ_CP038349.1_4828470_4829184_+	PRK12742, PRK12742, SDR family oxidoreductase
