assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013167475.1_ASM1316747v1	NZ_CP038333	Escherichia coli O157:H7 strain N8B7-2 chromosome, complete genome	1	1097717-1097805	1	CRISPRCasFinder	no	cas3	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas14i,DEDDh,DinG,PrimPol,c2c9_V-U4	Unclear	GAGTTCCCCGCGCCAGCGGGGATAAACC	28	0	0	NA	NA	I-E	1	1	Unclear	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas14i,DEDDh,DinG,PrimPol,c2c9_V-U4	NA,NA	NA|83aa|up_9|NZ_CP038333.1_1088193_1088442_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_8|NZ_CP038333.1_1088441_1088777_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_7|NZ_CP038333.1_1088847_1089639_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_6|NZ_CP038333.1_1089866_1091504_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_5|NZ_CP038333.1_1091591_1092890_+	PRK00077, eno, enolase; Provisional	NA|305aa|up_4|NZ_CP038333.1_1092949_1093864_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|383aa|up_3|NZ_CP038333.1_1093860_1095009_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|225aa|up_2|NZ_CP038333.1_1095242_1095917_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|207aa|up_1|NZ_CP038333.1_1095930_1096551_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|224aa|up_0|NZ_CP038333.1_1096705_1097377_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP038333.1_1098439_1099918_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP038333.1_1099944_1101222_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP038333.1_1101540_1102326_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP038333.1_1102395_1103850_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|260aa|down_4|NZ_CP038333.1_1105257_1106037_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|192aa|down_5|NZ_CP038333.1_1107041_1107617_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_6|NZ_CP038333.1_1107633_1107894_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_7|NZ_CP038333.1_1107884_1109156_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|121aa|down_8|NZ_CP038333.1_1109233_1109596_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_9|NZ_CP038333.1_1109914_1111714_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit
GCF_013167475.1_ASM1316747v1	NZ_CP038333	Escherichia coli O157:H7 strain N8B7-2 chromosome, complete genome	2	1123496-1123708	1,1,2	PILER-CR,CRT,CRISPRCasFinder	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas14i,DEDDh,DinG,PrimPol,c2c9_V-U4	Type I-E	TGTGTTCCCCGCGCCAGCGGGGATAAACCG,TGTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	30,30,29	0	0	NA	NA	I-E:I-E:I-E	2,3,3	3	TypeI-E	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas14i,DEDDh,DinG,PrimPol,c2c9_V-U4	NA,NA	NA|245aa|up_9|NZ_CP038333.1_1113499_1114234_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP038333.1_1114497_1114650_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP038333.1_1114841_1117541_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP038333.1_1117638_1119201_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP038333.1_1119197_1119734_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|NZ_CP038333.1_1119745_1120801_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP038333.1_1120811_1121558_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP038333.1_1121539_1122190_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP038333.1_1122186_1123110_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP038333.1_1123106_1123400_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP038333.1_1123789_1124827_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP038333.1_1125078_1125987_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP038333.1_1125988_1127416_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP038333.1_1127415_1128021_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP038333.1_1128070_1128394_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP038333.1_1128587_1128899_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP038333.1_1128917_1129628_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP038333.1_1129627_1130107_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP038333.1_1130103_1131153_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP038333.1_1131133_1131895_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_013167475.1_ASM1316747v1	NZ_CP038333	Escherichia coli O157:H7 strain N8B7-2 chromosome, complete genome	3	1689600-1689705	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas14i,DEDDh,DinG,PrimPol,c2c9_V-U4	Orphan	CCGAGCCGTAGGCCGGATTAGGCGTT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas14i,DEDDh,DinG,PrimPol,c2c9_V-U4	NA|357aa|up_5|NZ_CP038333.1_1683579_1684650_-,NA	NA|397aa|up_9|NZ_CP038333.1_1676579_1677770_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_8|NZ_CP038333.1_1677766_1679026_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_7|NZ_CP038333.1_1679015_1680644_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_6|NZ_CP038333.1_1680916_1682275_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|357aa|up_5|NZ_CP038333.1_1683579_1684650_-	NA	NA|293aa|up_4|NZ_CP038333.1_1685113_1685992_-	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|397aa|up_3|NZ_CP038333.1_1686143_1687334_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|217aa|up_2|NZ_CP038333.1_1687414_1688065_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP038333.1_1688118_1688373_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP038333.1_1688372_1689503_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP038333.1_1689729_1692015_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP038333.1_1692710_1696463_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP038333.1_1696603_1697326_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP038333.1_1697472_1700100_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|543aa|down_4|NZ_CP038333.1_1700307_1701936_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP038333.1_1701932_1702556_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|NZ_CP038333.1_1702699_1707094_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|265aa|down_7|NZ_CP038333.1_1707094_1707889_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|261aa|down_8|NZ_CP038333.1_1707961_1708744_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_9|NZ_CP038333.1_1708748_1709525_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_013167475.1_ASM1316747v1	NZ_CP038333	Escherichia coli O157:H7 strain N8B7-2 chromosome, complete genome	4	4680788-4680922	4	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas14i,DEDDh,DinG,PrimPol,c2c9_V-U4	Orphan	GGCCTACACGCTGCAATTTTGTAGGCCGGATAAGCAACGCGCATCCGGCA	50	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas14i,DEDDh,DinG,PrimPol,c2c9_V-U4	NA|190aa|up_7|NZ_CP038333.1_4671176_4671746_-,NA|241aa|down_4|NZ_CP038333.1_4688215_4688938_-	NA|44aa|up_9|NZ_CP038333.1_4669069_4669201_-	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|553aa|up_8|NZ_CP038333.1_4669289_4670948_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|190aa|up_7|NZ_CP038333.1_4671176_4671746_-	NA	NA|328aa|up_6|NZ_CP038333.1_4672117_4673101_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|NZ_CP038333.1_4673076_4674687_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|NZ_CP038333.1_4674670_4675369_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|NZ_CP038333.1_4675455_4676220_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|NZ_CP038333.1_4676305_4677184_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|NZ_CP038333.1_4677522_4679223_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|NZ_CP038333.1_4679233_4680736_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|NZ_CP038333.1_4680935_4681631_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|784aa|down_1|NZ_CP038333.1_4681705_4684057_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|NZ_CP038333.1_4684220_4687127_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|NZ_CP038333.1_4687138_4687798_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|241aa|down_4|NZ_CP038333.1_4688215_4688938_-	NA	NA|272aa|down_5|NZ_CP038333.1_4689232_4690048_-	PRK09430, djlA, co-chaperone DjlA	NA|785aa|down_6|NZ_CP038333.1_4690302_4692657_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_7|NZ_CP038333.1_4692709_4693996_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_8|NZ_CP038333.1_4693995_4694985_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_9|NZ_CP038333.1_4694981_4695803_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
GCF_013167475.1_ASM1316747v1	NZ_CP038333	Escherichia coli O157:H7 strain N8B7-2 chromosome, complete genome	5	4912294-4912443	5	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas14i,DEDDh,DinG,PrimPol,c2c9_V-U4	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas14i,DEDDh,DinG,PrimPol,c2c9_V-U4	NA|245aa|up_7|NZ_CP038333.1_4902481_4903216_-,NA|585aa|down_6|NZ_CP038333.1_4919540_4921295_-	NA|191aa|up_9|NZ_CP038333.1_4900301_4900874_+	pfam07455, Psu, Phage polarity suppression protein (Psu)	NA|415aa|up_8|NZ_CP038333.1_4901199_4902444_+	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|245aa|up_7|NZ_CP038333.1_4902481_4903216_-	NA	NA|102aa|up_6|NZ_CP038333.1_4903292_4903598_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|425aa|up_5|NZ_CP038333.1_4903765_4905040_-	PRK09692, PRK09692, integrase; Provisional	NA|340aa|up_4|NZ_CP038333.1_4905484_4906504_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP038333.1_4906633_4908136_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP038333.1_4908296_4909379_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP038333.1_4909378_4910479_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP038333.1_4910745_4912257_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP038333.1_4912610_4913054_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP038333.1_4913053_4915909_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP038333.1_4915963_4917160_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP038333.1_4917352_4917856_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP038333.1_4917901_4918318_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP038333.1_4918479_4919484_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|585aa|down_6|NZ_CP038333.1_4919540_4921295_-	NA	NA|151aa|down_7|NZ_CP038333.1_4921417_4921870_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_8|NZ_CP038333.1_4922014_4922608_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|238aa|down_9|NZ_CP038333.1_4922678_4923392_+	PRK12742, PRK12742, SDR family oxidoreductase
