assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013167255.1_ASM1316725v1	NZ_CP038295	Escherichia coli O157:H7 strain TB182A chromosome, complete genome	1	1139157-1139370	1,1	PILER-CR,CRT	no	cas3	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Unclear	TAACAAGAGTTCCCCGCGCCAGCGGGGATAAACCGCT,GAGTTCCCCGCGCCAGCGGGGATAAACCGC	37,30	0	0	NA	NA	I-E:I-E	2,3	3	Unclear	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA,NA|37aa|down_1|NZ_CP038295.1_1141510_1141621_-	NA|83aa|up_9|NZ_CP038295.1_1129634_1129883_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_8|NZ_CP038295.1_1129882_1130218_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_7|NZ_CP038295.1_1130288_1131080_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_6|NZ_CP038295.1_1131307_1132945_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_5|NZ_CP038295.1_1133032_1134331_+	PRK00077, eno, enolase; Provisional	NA|305aa|up_4|NZ_CP038295.1_1134390_1135305_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|383aa|up_3|NZ_CP038295.1_1135301_1136450_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|298aa|up_2|NZ_CP038295.1_1136464_1137358_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|207aa|up_1|NZ_CP038295.1_1137371_1137992_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|224aa|up_0|NZ_CP038295.1_1138146_1138818_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP038295.1_1140005_1141484_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|37aa|down_1|NZ_CP038295.1_1141510_1141621_-	NA	NA|377aa|down_2|NZ_CP038295.1_1141657_1142788_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_3|NZ_CP038295.1_1143106_1143892_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_4|NZ_CP038295.1_1143961_1145416_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_5|NZ_CP038295.1_1145437_1146847_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_6|NZ_CP038295.1_1146824_1147604_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP038295.1_1148608_1149184_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP038295.1_1149200_1149461_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP038295.1_1149451_1150723_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_013167255.1_ASM1316725v1	NZ_CP038295	Escherichia coli O157:H7 strain TB182A chromosome, complete genome	2	1165064-1165277	2,1,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCGGC,GTGTTCCCCGCGCCAGCGGGGATAAACCGGC,GTGTTCCCCGCGCCAGCGGGGATAAACCGGC	31,31,31	0	0	NA	NA	I-E:I-E:I-E	2,3,3	3	TypeI-E	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA,NA	NA|245aa|up_9|NZ_CP038295.1_1155066_1155801_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP038295.1_1156064_1156217_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP038295.1_1156408_1159108_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP038295.1_1159205_1160768_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP038295.1_1160764_1161301_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|NZ_CP038295.1_1161312_1162368_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP038295.1_1162378_1163125_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP038295.1_1163106_1163757_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP038295.1_1163753_1164677_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP038295.1_1164673_1164967_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP038295.1_1165356_1166394_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP038295.1_1166645_1167554_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP038295.1_1167555_1168983_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP038295.1_1168982_1169588_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP038295.1_1169637_1169961_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP038295.1_1170154_1170466_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP038295.1_1170484_1171195_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP038295.1_1171194_1171674_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP038295.1_1171670_1172720_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP038295.1_1172700_1173462_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_013167255.1_ASM1316725v1	NZ_CP038295	Escherichia coli O157:H7 strain TB182A chromosome, complete genome	3	1690047-1690152	2	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	CCGAGCCGTAGGCCGGATTAGGCGTT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA|357aa|up_4|NZ_CP038295.1_1684026_1685097_-,NA	NA|397aa|up_9|NZ_CP038295.1_1677026_1678217_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_8|NZ_CP038295.1_1678213_1679473_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_7|NZ_CP038295.1_1679462_1681091_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_6|NZ_CP038295.1_1681363_1682722_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_5|NZ_CP038295.1_1682726_1683803_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|357aa|up_4|NZ_CP038295.1_1684026_1685097_-	NA	NA|293aa|up_3|NZ_CP038295.1_1685560_1686439_-	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|217aa|up_2|NZ_CP038295.1_1687861_1688512_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP038295.1_1688565_1688820_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP038295.1_1688819_1689950_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP038295.1_1690176_1692462_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP038295.1_1693157_1696910_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP038295.1_1697050_1697773_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP038295.1_1697919_1700547_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP038295.1_1700695_1702384_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP038295.1_1702380_1703004_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|399aa|down_6|NZ_CP038295.1_1706164_1707361_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|265aa|down_7|NZ_CP038295.1_1708988_1709783_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|261aa|down_8|NZ_CP038295.1_1709855_1710638_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_9|NZ_CP038295.1_1710642_1711419_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_013167255.1_ASM1316725v1	NZ_CP038295	Escherichia coli O157:H7 strain TB182A chromosome, complete genome	4	2167444-2167593	3	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Unclear	TACCAGAGATAGCGAACCGTAGGTCGGAAAAGGCGCTCGCGCCGCATCCGACA	53	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA|22aa|up_2|NZ_CP038295.1_2165531_2165597_+,NA	NA|273aa|up_9|NZ_CP038295.1_2159497_2160316_-	PRK10302, PRK10302, hypothetical protein; Provisional	NA|189aa|up_8|NZ_CP038295.1_2160312_2160879_-	PRK11440, PRK11440, putative hydrolase; Provisional	NA|591aa|up_7|NZ_CP038295.1_2161188_2162961_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|151aa|up_6|NZ_CP038295.1_2163078_2163531_+	PRK09438, nudB, dihydroneopterin triphosphate pyrophosphatase; Provisional	NA|247aa|up_5|NZ_CP038295.1_2163559_2164300_+	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator	NA|174aa|up_4|NZ_CP038295.1_2164334_2164856_+	TIGR00228, Crossover_junction_endodeoxyribonuclease_RuvC, crossover junction endodeoxyribonuclease RuvC	NA|201aa|up_3|NZ_CP038295.1_2164857_2165460_-	PRK11470, PRK11470, YebB family permuted papain-like enzyme	NA|22aa|up_2|NZ_CP038295.1_2165531_2165597_+	NA	NA|204aa|up_1|NZ_CP038295.1_2165735_2166347_+	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|337aa|up_0|NZ_CP038295.1_2166355_2167366_+	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB	NA|262aa|down_0|NZ_CP038295.1_2167611_2168397_-	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB	NA|252aa|down_1|NZ_CP038295.1_2168393_2169149_-	PRK09544, znuC, high-affinity zinc transporter ATPase; Reviewed	NA|311aa|down_2|NZ_CP038295.1_2169227_2170160_+	PRK09545, znuA, zinc ABC transporter substrate-binding protein ZnuA	NA|441aa|down_3|NZ_CP038295.1_2170175_2171498_+	PRK11649, PRK11649, putative peptidase; Provisional	NA|324aa|down_4|NZ_CP038295.1_2171617_2172589_+	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	NA|481aa|down_5|NZ_CP038295.1_2172719_2174162_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|290aa|down_6|NZ_CP038295.1_2174289_2175159_-	PRK11302, PRK11302, DNA-binding transcriptional regulator HexR; Provisional	NA|492aa|down_7|NZ_CP038295.1_2175496_2176972_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|604aa|down_8|NZ_CP038295.1_2177206_2179018_+	PRK09054, PRK09054, phosphogluconate dehydratase; Validated	NA|214aa|down_9|NZ_CP038295.1_2179054_2179696_+	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
GCF_013167255.1_ASM1316725v1	NZ_CP038295	Escherichia coli O157:H7 strain TB182A chromosome, complete genome	5	2365267-2365390	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA,NA|30aa|down_7|NZ_CP038295.1_2374286_2374376_+	NA|471aa|up_9|NZ_CP038295.1_2354720_2356133_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP038295.1_2356689_2356899_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP038295.1_2357354_2357981_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP038295.1_2358001_2360104_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP038295.1_2360116_2360755_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP038295.1_2360818_2361487_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP038295.1_2361483_2362269_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP038295.1_2362272_2363085_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP038295.1_2363096_2364701_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP038295.1_2364826_2365132_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP038295.1_2365704_2366961_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP038295.1_2367001_2368375_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP038295.1_2368589_2369231_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP038295.1_2369270_2370419_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP038295.1_2370709_2371921_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP038295.1_2372033_2372966_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP038295.1_2372962_2373988_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP038295.1_2374286_2374376_+	NA	NA|390aa|down_8|NZ_CP038295.1_2374542_2375712_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP038295.1_2375857_2376439_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_013167255.1_ASM1316725v1	NZ_CP038295	Escherichia coli O157:H7 strain TB182A chromosome, complete genome	6	3182990-3183081	5	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA|70aa|up_9|NZ_CP038295.1_3172240_3172450_-,NA	NA|70aa|up_9|NZ_CP038295.1_3172240_3172450_-	NA	NA|1321aa|up_8|NZ_CP038295.1_3172504_3176467_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP038295.1_3176506_3177145_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP038295.1_3177432_3178524_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP038295.1_3178523_3179216_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP038295.1_3179227_3179614_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP038295.1_3179621_3180422_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP038295.1_3180431_3181022_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP038295.1_3181032_3181527_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP038295.1_3181547_3182876_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP038295.1_3183504_3184101_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP038295.1_3184121_3184349_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP038295.1_3184386_3185628_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|449aa|down_3|NZ_CP038295.1_3185918_3187265_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP038295.1_3187524_3188445_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP038295.1_3188444_3188750_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP038295.1_3188903_3189503_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP038295.1_3189499_3192046_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP038295.1_3192045_3193218_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP038295.1_3193347_3194040_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_013167255.1_ASM1316725v1	NZ_CP038295	Escherichia coli O157:H7 strain TB182A chromosome, complete genome	7	4398973-4399107	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	GGCCTACACGCTGCAATTTTGTAGGCCGGATAAGCAACGCGCATCCGGCA	50	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA|190aa|up_7|NZ_CP038295.1_4389361_4389931_-,NA|246aa|down_4|NZ_CP038295.1_4406400_4407138_-	NA|44aa|up_9|NZ_CP038295.1_4387254_4387386_-	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|553aa|up_8|NZ_CP038295.1_4387474_4389133_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|190aa|up_7|NZ_CP038295.1_4389361_4389931_-	NA	NA|328aa|up_6|NZ_CP038295.1_4390302_4391286_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|NZ_CP038295.1_4391261_4392872_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|NZ_CP038295.1_4392855_4393554_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|NZ_CP038295.1_4393640_4394405_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|NZ_CP038295.1_4394490_4395369_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|NZ_CP038295.1_4395707_4397408_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|NZ_CP038295.1_4397418_4398921_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|NZ_CP038295.1_4399120_4399816_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|784aa|down_1|NZ_CP038295.1_4399890_4402242_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|NZ_CP038295.1_4402405_4405312_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|NZ_CP038295.1_4405323_4405983_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|246aa|down_4|NZ_CP038295.1_4406400_4407138_-	NA	NA|272aa|down_5|NZ_CP038295.1_4407432_4408248_-	PRK09430, djlA, co-chaperone DjlA	NA|783aa|down_6|NZ_CP038295.1_4408502_4410851_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_7|NZ_CP038295.1_4410903_4412190_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_8|NZ_CP038295.1_4412189_4413179_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_9|NZ_CP038295.1_4413175_4413997_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
GCF_013167255.1_ASM1316725v1	NZ_CP038295	Escherichia coli O157:H7 strain TB182A chromosome, complete genome	8	4423853-4423989	3	PILER-CR	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	TGAATCACCAATATTGAAAAT	21	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA,NA	NA|105aa|up_9|NZ_CP038295.1_4415228_4415543_-	pfam01845, CcdB, CcdB protein	NA|78aa|up_8|NZ_CP038295.1_4415545_4415779_-	COG5302, COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid [General function prediction only]	NA|160aa|up_7|NZ_CP038295.1_4415864_4416344_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP038295.1_4416535_4418398_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP038295.1_4418390_4418921_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP038295.1_4419028_4420360_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP038295.1_4420417_4420705_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP038295.1_4420701_4421988_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP038295.1_4422038_4422980_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP038295.1_4422994_4423765_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP038295.1_4424238_4425753_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP038295.1_4425783_4426926_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP038295.1_4427054_4428272_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|NZ_CP038295.1_4428345_4429899_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|NZ_CP038295.1_4430007_4430793_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|NZ_CP038295.1_4430798_4431389_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|NZ_CP038295.1_4431507_4431903_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|NZ_CP038295.1_4432163_4435385_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|NZ_CP038295.1_4435402_4436551_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|NZ_CP038295.1_4437006_4437828_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
GCF_013167255.1_ASM1316725v1	NZ_CP038295	Escherichia coli O157:H7 strain TB182A chromosome, complete genome	9	4637894-4638043	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA|105aa|up_8|NZ_CP038295.1_4627727_4628042_-,NA|270aa|up_6|NZ_CP038295.1_4628443_4629253_-,NA	NA|423aa|up_9|NZ_CP038295.1_4626172_4627441_-	cd01186, INT_tnpA_C_Tn554, Putative Transposase A from transposon Tn554, C-terminal catalytic domain	NA|105aa|up_8|NZ_CP038295.1_4627727_4628042_-	NA	NA|72aa|up_7|NZ_CP038295.1_4628061_4628277_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|270aa|up_6|NZ_CP038295.1_4628443_4629253_-	NA	NA|417aa|up_5|NZ_CP038295.1_4629364_4630615_-	PRK09692, PRK09692, integrase; Provisional	NA|340aa|up_4|NZ_CP038295.1_4631084_4632104_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP038295.1_4632233_4633736_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP038295.1_4633896_4634979_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP038295.1_4634978_4636079_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP038295.1_4636345_4637857_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP038295.1_4638210_4638654_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP038295.1_4638653_4641509_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP038295.1_4641563_4642760_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP038295.1_4642952_4643456_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP038295.1_4643501_4643918_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP038295.1_4644079_4645084_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|151aa|down_6|NZ_CP038295.1_4647106_4647559_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_7|NZ_CP038295.1_4647703_4648297_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|238aa|down_8|NZ_CP038295.1_4648367_4649081_+	PRK12742, PRK12742, SDR family oxidoreductase	NA|132aa|down_9|NZ_CP038295.1_4649211_4649607_+	cd02198, YjgH_like, YjgH belongs to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
