assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013162165.1_ASM1316216v1	NZ_CP053582	Salmonella enterica subsp. VII serovar 1,40:g,z51:-- strain 2439-64 chromosome, complete genome	1	1964022-1964291	1	CRT	no		DEDDh,DinG,cas3,csa3,WYL	Orphan	TAGTCCTGGCGGCAGCGGCGGCAGGCNGGT	30	0	0	NA	NA	NA	4	4	Orphan	DEDDh,DinG,cas3,csa3,WYL	NA,NA	NA|991aa|up_9|NZ_CP053582.1_1944881_1947854_-	PRK15483, PRK15483, type III restriction-modification system endonuclease	NA|653aa|up_8|NZ_CP053582.1_1947863_1949822_-	COG2189, COG2189, Adenine specific DNA methylase Mod [DNA replication, recombination, and repair]	NA|418aa|up_7|NZ_CP053582.1_1950007_1951261_-	TIGR00891, Carboxylic_acid_transporter_protein_homolog, putative sialic acid transporter	NA|65aa|up_6|NZ_CP053582.1_1951555_1951750_-	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]	NA|157aa|up_5|NZ_CP053582.1_1951827_1952298_-	cd01108, HTH_CueR, Helix-Turn-Helix DNA binding domain of CueR-like transcription regulators	NA|763aa|up_4|NZ_CP053582.1_1952309_1954598_-	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|408aa|up_3|NZ_CP053582.1_1954877_1956101_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1059aa|up_2|NZ_CP053582.1_1956097_1959274_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|486aa|up_1|NZ_CP053582.1_1959290_1960748_+	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|453aa|up_0|NZ_CP053582.1_1961006_1962365_+	cd01303, GDEase, Guanine deaminase (GDEase)	NA|374aa|down_0|NZ_CP053582.1_1965646_1966768_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|116aa|down_1|NZ_CP053582.1_1966787_1967135_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|139aa|down_2|NZ_CP053582.1_1967131_1967548_-	pfam01527, HTH_Tnp_1, Transposase	NA|1140aa|down_3|NZ_CP053582.1_1969137_1972557_-	pfam15962, DUF4765, Domain of unknown function (DUF4765)	NA|75aa|down_4|NZ_CP053582.1_1973223_1973448_+	pfam15284, PAGK, Phage-encoded virulence factor	NA|270aa|down_5|NZ_CP053582.1_1974092_1974902_-	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|417aa|down_6|NZ_CP053582.1_1975960_1977211_-	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|368aa|down_7|NZ_CP053582.1_1977222_1978326_-	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|351aa|down_8|NZ_CP053582.1_1978608_1979661_+	PRK10159, PRK10159, phosphoporin PhoE	NA|134aa|down_9|NZ_CP053582.1_1979712_1980114_-	PRK10984, PRK10984, sigma factor-binding protein Crl
GCF_013162165.1_ASM1316216v1	NZ_CP053582	Salmonella enterica subsp. VII serovar 1,40:g,z51:-- strain 2439-64 chromosome, complete genome	2	3153993-3155363	1,2,1	CRISPRCasFinder,CRT,PILER-CR	no	cas3	DEDDh,DinG,cas3,csa3,WYL	Unclear	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	22,22,22	22	Unclear	DEDDh,DinG,cas3,csa3,WYL	NA,NA|105aa|down_7|NZ_CP053582.1_3163721_3164036_-,NA|109aa|down_8|NZ_CP053582.1_3164141_3164468_-	NA|254aa|up_9|NZ_CP053582.1_3145859_3146621_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP053582.1_3146601_3147651_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP053582.1_3147647_3148127_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP053582.1_3148126_3148837_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP053582.1_3148855_3149167_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP053582.1_3149357_3149681_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP053582.1_3149731_3150337_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|480aa|up_2|NZ_CP053582.1_3150323_3151763_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP053582.1_3151772_3152681_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|349aa|up_0|NZ_CP053582.1_3152931_3153978_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas3|339aa|down_0|NZ_CP053582.1_3155376_3156393_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|318aa|down_1|NZ_CP053582.1_3156791_3157745_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|down_2|NZ_CP053582.1_3157834_3158569_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_3|NZ_CP053582.1_3158668_3160381_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|down_4|NZ_CP053582.1_3160380_3162180_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|121aa|down_5|NZ_CP053582.1_3162484_3162847_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|224aa|down_6|NZ_CP053582.1_3162924_3163596_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|105aa|down_7|NZ_CP053582.1_3163721_3164036_-	NA	NA|109aa|down_8|NZ_CP053582.1_3164141_3164468_-	NA	NA|262aa|down_9|NZ_CP053582.1_3164470_3165256_-	pfam13988, DUF4225, Protein of unknown function (DUF4225)
