The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP053564	Pseudonocardia sp. Gen01 chromosome, complete genome	7177725	2650699	2662782	7177725	protease	Gordonia_phage(50.0%)	18	NA	NA
WP_172158242.1|2650699_2651623_-	hypothetical protein	NA	A0A1C9EHT7	Gordonia_phage	54.4	5.9e-90
WP_172158244.1|2651636_2652008_-	DUF2190 family protein	NA	A0A142K8P7	Gordonia_phage	46.9	3.7e-19
WP_172158246.1|2652011_2653319_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A2K9VH82	Gordonia_phage	40.0	2.2e-69
WP_172158249.1|2653311_2654568_-	hypothetical protein	NA	A0A142K8P5	Gordonia_phage	65.1	6.1e-146
WP_172158251.1|2654592_2656227_-	hypothetical protein	NA	A0A2D1GPK4	Mycobacterium_phage	27.5	3.6e-37
WP_172158254.1|2656132_2656582_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172158256.1|2657243_2657603_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172158259.1|2657611_2658409_-	hypothetical protein	NA	G1BSL2	Mycobacterium_virus	37.2	3.2e-07
WP_172158261.1|2658463_2658802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172158264.1|2658798_2659389_-	HNH endonuclease	NA	A0A2I7RHS8	Vibrio_phage	34.8	1.5e-17
WP_172158266.1|2659444_2660011_-	hypothetical protein	NA	A0A2K9VEY9	Mycobacterium_phage	24.1	2.8e-05
WP_172158269.1|2660007_2660979_-	DNA cytosine methyltransferase	NA	A0A088FRI5	Mycobacterium_phage	65.3	1.4e-113
WP_172158271.1|2660975_2661332_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172158274.1|2661328_2661616_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172158276.1|2661612_2661957_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172158279.1|2661953_2662181_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172158281.1|2662177_2662345_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172158282.1|2662341_2662782_-	hypothetical protein	NA	A0A2H4PFF7	Gordonia_phage	45.9	6.9e-12
>prophage 2
NZ_CP053564	Pseudonocardia sp. Gen01 chromosome, complete genome	7177725	4148282	4200992	7177725	integrase,transposase,protease	Corynebacterium_phage(33.33%)	47	4148224:4148283	4200992:4202413
4148224:4148283	attL	GGGTCACGTCCCGCTGAGTGGTGGAGTTCGTGCTCGACACCGTGCGGGTCAGTGCGTGCT	NA	NA	NA	NA
WP_172160996.1|4148282_4149518_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	52.2	6.1e-106
WP_172160998.1|4150565_4150943_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172161000.1|4151095_4152415_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_172168703.1|4152554_4153349_+	DUF3105 domain-containing protein	NA	NA	NA	NA	NA
WP_172161002.1|4153345_4154077_+	DUF305 domain-containing protein	NA	NA	NA	NA	NA
WP_172161004.1|4154186_4155776_+	polyprenol phosphomannose-dependent alpha 1,6 mannosyltransferase MptB	NA	NA	NA	NA	NA
WP_172161006.1|4155855_4157091_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_172161008.1|4157441_4157942_-	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_172161010.1|4158120_4158927_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_172161012.1|4158868_4159282_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172161014.1|4160025_4161477_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_172161016.1|4161477_4161753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172161018.1|4161807_4162716_-	cation transporter	NA	NA	NA	NA	NA
WP_172161020.1|4163105_4163600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172161022.1|4163747_4164719_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_172161024.1|4164718_4166977_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	35.6	6.5e-98
WP_172161026.1|4167278_4167857_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_172161028.1|4167987_4168197_+	CbtB-domain containing protein	NA	NA	NA	NA	NA
WP_172161030.1|4168214_4168958_+	CbtA family protein	NA	NA	NA	NA	NA
WP_172161032.1|4168996_4169305_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_172161034.1|4169301_4170279_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172161036.1|4170275_4170689_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172161038.1|4170688_4171993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172161040.1|4172036_4173059_-	hypothetical protein	NA	A0A222YZS8	Streptomyces_phage	61.4	2.0e-38
WP_172168706.1|4173251_4174388_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_172161051.1|4174522_4175578_-	multicopper oxidase domain-containing protein	NA	NA	NA	NA	NA
WP_172161053.1|4175574_4176276_-	metal-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_172161055.1|4176580_4177579_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172161057.1|4177683_4178316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172168727.1|4178346_4179441_-	nitroreductase family deazaflavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_172161059.1|4179491_4179752_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172161061.1|4179836_4182713_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_172153787.1|4183429_4184065_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172168730.1|4184156_4185278_-	NAD(P)-binding domain-containing protein	NA	A0A2H4J2Q2	uncultured_Caudovirales_phage	28.3	1.2e-12
WP_172161063.1|4185759_4186908_+	DUF932 domain-containing protein	NA	A0A140G6E9	Arthrobacter_phage	51.2	3.9e-99
WP_172161065.1|4186999_4187719_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172153788.1|4188171_4189761_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172168733.1|4189966_4191181_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_172168736.1|4191263_4193603_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_172161067.1|4193599_4193827_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172161069.1|4193883_4194423_+	hypothetical protein	NA	V5UQR1	Mycobacterium_phage	34.3	6.7e-09
WP_172161071.1|4194494_4194983_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172161073.1|4195251_4195707_+	single-stranded DNA-binding protein	NA	A0A1J0MC68	Streptomyces_phage	43.6	8.7e-18
WP_172161075.1|4196019_4196862_+	bifunctional DNA primase/polymerase	NA	NA	NA	NA	NA
WP_172161077.1|4197239_4197461_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172161079.1|4197763_4199551_+	DUF4041 domain-containing protein	NA	A0A220NQR9	Corynebacterium_phage	43.8	4.3e-52
WP_172160996.1|4199756_4200992_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	52.2	6.1e-106
4200992:4202413	attR	AGCACGCACTGACCCGCACGGTGTCGAGCACGAACTCCACCACTCAGCGGGACGTGACCCGAAAGGGCAATTTCATGGCACGACGGCGGGGATTGGTCGCCAGCATCGCGCGCATGCAGCGCGAGGCCGAGCGCGCACGGGCGGTACGTGAGCGCGATGCGGCGCGCCGGGCACGCGAGGCGCAGCGATCGCAGGCCGCGCGGGCGCGGGAGCGGGTGGCCGACCAGAAGGAACGAGCCCGCCTGTACGCCCTGGCGCGGGCCGAGGAGGTCGCGGGGGACAACGCGGAGCTCGAGGCCGAAGTCGCTGCGCTGGAGGGAGTGCTCGCCTCGACCCTGGACATCGACGACTTCCTGGATCTGGAGACTCTCAAGCGGCCACTGGTGCTGCCGCAGTTCGACCCGAGTGTCGCCGGTGTTGTGCGCCCGGCGCCGCGACTGGAGGAGTTCCTGCCCGATGCGCCGTCCGGTCTGGGACGGGCGTTCGGCGGCGCTGCGCGCCATCAGGAACGCGTGCAGCAGGCGCAGGCAGCGTTCGAGCGGGCAGCCGCAGCCCACCAGGTGCAGGTGCAGGCGCACGGAAGGGACTTCGAGGCGGCCCGGCGACGACACGACGCCGAGGTCGCGCGGCTGGCCGTCGAGCATCGTGAGCAGATCGAGCAGGTCACGGACCTGCAGCGTGGCCTTGCCGCGGGCCTACCCGACGCCGTCGTCGGATACCTCGACCTGGTGTTGGAAGCGGCGGCCTACCCGGACGGTTTCCCGCACGCCTGGCGCCTGGCTTACTCACCCGAGACCCGCCAGCTCGTCGTGGAGTACGAGCTTCCCGCTCGCGAGGTGGTCCCGGTGGCGAAGGCCTACCGCTACATCAAGAGCAGCGACACCGTCACTCCCGTTGCCCGGTCCCAGGCGCAGATCCGCGCTCTCTACAGCTCGGTCGTGGCCCAGACAGTGCTCCGTGTGGTGCACGAGGTCCTCGAGTCCGACCGGGCCGGACGGGTCGCCTCTGTCGTGCTGAACGCGCACGTCACTGCCACGGATCCAGGGACCGGACGGCCGGTCCGGCCGTGCCTGGTCGCGCTCGGGACGACCCGGTCCCGATTCATGGAGCTCGACCTGCGCCGGGTGGATCCGGCCGCATGCCTGCGGCATCTCGAGGCCCGGGTCAGCCGGGACCCCGCCGCGCTCGTCCCGGTCGAGACGATGGTGCGTTTCGACTCAATCGATCTGCGGTTCTCGTCCGAGACCGAGCAGGTCGGACAGCCGGCGACCGCAGGTTCAGCGGTGAACGACAGCGCGCCGGCGCCGACGCTCGTTACGCCTGGATCCGACGAACGCCGACCCGCGGTACCTGTTCGGCCGGAGCCCCTGAATCCCAGCGCAGAGCAGGACCTGAGCGCGGGTCAGAACGTCGTACTGACCG	NA	NA	NA	NA
>prophage 1
NZ_CP053567	Pseudonocardia sp. Gen01 plasmid unnamed3, complete sequence	27393	0	5872	27393	terminase	Arthrobacter_phage(33.33%)	6	NA	NA
WP_172170111.1|313_520_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172170216.1|531_1971_-|terminase	terminase	terminase	A0A0U4JKK7	Arthrobacter_phage	39.1	1.3e-83
WP_172170114.1|2125_2467_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172170117.1|2731_3004_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172170120.1|3416_4958_-	NTP-binding protein	NA	A0A060D5T9	Salmonella_phage	37.5	6.1e-55
WP_172170123.1|4957_5872_-	bifunctional DNA primase/polymerase	NA	A0A0K1LKD4	Vibrio_phage	31.1	9.0e-22
>prophage 2
NZ_CP053567	Pseudonocardia sp. Gen01 plasmid unnamed3, complete sequence	27393	13280	13961	27393		Mycobacterium_phage(100.0%)	1	NA	NA
WP_172170153.1|13280_13961_-	AAA family ATPase	NA	A0A222ZPP5	Mycobacterium_phage	30.1	1.3e-06
>prophage 3
NZ_CP053567	Pseudonocardia sp. Gen01 plasmid unnamed3, complete sequence	27393	17041	26293	27393	capsid,head,protease,tail	Streptomyces_phage(40.0%)	12	NA	NA
WP_172170177.1|17041_19885_-	hypothetical protein	NA	A0A142K644	Streptomyces_phage	29.4	8.9e-44
WP_172170180.1|19888_21235_-	hypothetical protein	NA	A0A2R4A0Z4	Microbacterium_phage	49.3	1.1e-07
WP_172170219.1|21234_21633_-	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_172170183.1|21658_21835_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172170186.1|21815_22169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172170189.1|22201_22609_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172170192.1|22610_22997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172170195.1|23011_23644_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_172170198.1|23656_23983_-	hypothetical protein	NA	A0A142K639	Streptomyces_phage	38.5	1.4e-06
WP_172170201.1|23982_24168_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172170204.1|24171_25467_-|capsid	phage major capsid protein	capsid	A0A142F2E2	Mycobacterium_phage	27.4	2.7e-16
WP_172170207.1|25693_26293_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2R4A075	Microbacterium_phage	37.6	1.4e-07
