assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013137955.1_ASM1313795v1	NZ_CP053477	Staphylococcus warneri strain WB224 chromosome, complete genome	1	332360-332725	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2	cas3,cas9,cas1,cas2,WYL,csa3,cas14j,DEDDh,DinG	Type II-A,Type II-B, Type II-B, or Type II-C?,Type II-C	GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC,GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC,GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	4,5,5	5	TypeII-A,TypeII-B,TypeII-B,orTypeII-C?,TypeII-C	cas3,cas9,cas1,cas2,WYL,csa3,cas14j,DEDDh,DinG	NA|30aa|up_1|NZ_CP053477.1_330804_330894_+,NA|336aa|down_3|NZ_CP053477.1_337371_338379_+	NA|273aa|up_9|NZ_CP053477.1_322098_322917_+	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family	NA|431aa|up_8|NZ_CP053477.1_322909_324202_+	pfam10100, DUF2338, Uncharacterized protein conserved in bacteria (DUF2338)	NA|533aa|up_7|NZ_CP053477.1_324269_325868_+	TIGR02294, Nickel-binding_periplasmic_protein, nickel ABC transporter, nickel/metallophore periplasmic binding protein	NA|312aa|up_6|NZ_CP053477.1_325880_326816_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|290aa|up_5|NZ_CP053477.1_326812_327682_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|272aa|up_4|NZ_CP053477.1_327678_328494_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|250aa|up_3|NZ_CP053477.1_328486_329236_+	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|393aa|up_2|NZ_CP053477.1_329247_330426_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|30aa|up_1|NZ_CP053477.1_330804_330894_+	NA	NA|313aa|up_0|NZ_CP053477.1_331264_332203_+	cd08347, PcpA_C_like, C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins	cas9|1055aa|down_0|NZ_CP053477.1_332975_336140_+	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	cas1|301aa|down_1|NZ_CP053477.1_336142_337045_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|103aa|down_2|NZ_CP053477.1_337049_337358_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|336aa|down_3|NZ_CP053477.1_337371_338379_+	NA	NA|578aa|down_4|NZ_CP053477.1_338906_340640_+	pfam09848, DUF2075, Uncharacterized conserved protein (DUF2075)	NA|113aa|down_5|NZ_CP053477.1_340645_340984_+	cd11537, NTP-PPase_RS21-C6_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|620aa|down_6|NZ_CP053477.1_341102_342962_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|652aa|down_7|NZ_CP053477.1_343041_344997_+	COG1299, FruA, Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism]	NA|312aa|down_8|NZ_CP053477.1_345011_345947_+	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|279aa|down_9|NZ_CP053477.1_346200_347037_+	PRK02463, PRK02463, OxaA-like protein precursor; Provisional
GCF_013137955.1_ASM1313795v1	NZ_CP053477	Staphylococcus warneri strain WB224 chromosome, complete genome	2	338399-338896	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2	cas3,cas9,cas1,cas2,WYL,csa3,cas14j,DEDDh,DinG	Type II-A,Type II-B, Type II-B, or Type II-C?,Type II-C	GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC,GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC,GTTTTAGTACTCTGTAATTTTAGGTATGAGTGAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	6,7,7	7	TypeII-A,TypeII-B,TypeII-B,orTypeII-C?,TypeII-C	cas3,cas9,cas1,cas2,WYL,csa3,cas14j,DEDDh,DinG	NA|30aa|up_5|NZ_CP053477.1_330804_330894_+,NA|336aa|up_0|NZ_CP053477.1_337371_338379_+,NA|216aa|down_6|NZ_CP053477.1_347853_348501_+,NA|177aa|down_8|NZ_CP053477.1_349807_350338_+	NA|290aa|up_9|NZ_CP053477.1_326812_327682_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|272aa|up_8|NZ_CP053477.1_327678_328494_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|250aa|up_7|NZ_CP053477.1_328486_329236_+	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|393aa|up_6|NZ_CP053477.1_329247_330426_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|30aa|up_5|NZ_CP053477.1_330804_330894_+	NA	NA|313aa|up_4|NZ_CP053477.1_331264_332203_+	cd08347, PcpA_C_like, C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins	cas9|1055aa|up_3|NZ_CP053477.1_332975_336140_+	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	cas1|301aa|up_2|NZ_CP053477.1_336142_337045_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|103aa|up_1|NZ_CP053477.1_337049_337358_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|336aa|up_0|NZ_CP053477.1_337371_338379_+	NA	NA|578aa|down_0|NZ_CP053477.1_338906_340640_+	pfam09848, DUF2075, Uncharacterized conserved protein (DUF2075)	NA|113aa|down_1|NZ_CP053477.1_340645_340984_+	cd11537, NTP-PPase_RS21-C6_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|620aa|down_2|NZ_CP053477.1_341102_342962_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|652aa|down_3|NZ_CP053477.1_343041_344997_+	COG1299, FruA, Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism]	NA|312aa|down_4|NZ_CP053477.1_345011_345947_+	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|279aa|down_5|NZ_CP053477.1_346200_347037_+	PRK02463, PRK02463, OxaA-like protein precursor; Provisional	NA|216aa|down_6|NZ_CP053477.1_347853_348501_+	NA	NA|189aa|down_7|NZ_CP053477.1_348555_349122_-	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain	NA|177aa|down_8|NZ_CP053477.1_349807_350338_+	NA	NA|605aa|down_9|NZ_CP053477.1_351026_352841_+	PRK08293, PRK08293, 3-hydroxyacyl-CoA dehydrogenase
GCF_013137955.1_ASM1313795v1	NZ_CP053477	Staphylococcus warneri strain WB224 chromosome, complete genome	3	375654-375736	3	CRISPRCasFinder	no		cas3,cas9,cas1,cas2,WYL,csa3,cas14j,DEDDh,DinG	Orphan	CTCGTAGATGAACTATCAGAAAG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,cas9,cas1,cas2,WYL,csa3,cas14j,DEDDh,DinG	NA,NA	NA|177aa|up_9|NZ_CP053477.1_361494_362025_+	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|171aa|up_8|NZ_CP053477.1_362360_362873_+	PTZ00053, PTZ00053, methionine aminopeptidase 2; Provisional	NA|189aa|up_7|NZ_CP053477.1_362911_363478_+	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|447aa|up_6|NZ_CP053477.1_363696_365037_-	TIGR02919, conserved_hypothetical_protein, accessory Sec system glycosyltransferase GtfB	NA|506aa|up_5|NZ_CP053477.1_365029_366547_-	TIGR02918, lipopolysaccharide_biosynthesis_protein, accessory Sec system glycosylation protein GtfA	NA|797aa|up_4|NZ_CP053477.1_366561_368952_-	PRK09200, PRK09200, preprotein translocase subunit SecA; Reviewed	NA|207aa|up_3|NZ_CP053477.1_368984_369605_-	TIGR03711, acc_sec_asp3, accessory Sec system protein Asp3	NA|527aa|up_2|NZ_CP053477.1_369594_371175_-	TIGR03712, acc_sec_asp2, accessory Sec system protein Asp2	NA|521aa|up_1|NZ_CP053477.1_371164_372727_-	TIGR03713, acc_sec_asp1, accessory Sec system protein Asp1	NA|404aa|up_0|NZ_CP053477.1_372737_373949_-	PRK12417, secY, preprotein translocase subunit SecY; Reviewed	NA|230aa|down_0|NZ_CP053477.1_382629_383319_+	pfam13489, Methyltransf_23, Methyltransferase domain	NA|517aa|down_1|NZ_CP053477.1_383318_384869_+	cd08489, PBP2_NikA, The substrate-binding component of an ABC-type nickel import system contains the type 2 periplasmic binding fold	NA|320aa|down_2|NZ_CP053477.1_384870_385830_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|257aa|down_3|NZ_CP053477.1_385822_386593_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|262aa|down_4|NZ_CP053477.1_386559_387345_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|209aa|down_5|NZ_CP053477.1_387319_387946_+	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|141aa|down_6|NZ_CP053477.1_388070_388493_+	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|283aa|down_7|NZ_CP053477.1_388554_389403_+	cd19133, AKR_AKR5F1, the AKR5F family of aldo-keto reductase (AKR)	NA|311aa|down_8|NZ_CP053477.1_389466_390399_-	cd01138, FeuA, Periplasmic binding protein FeuA	NA|232aa|down_9|NZ_CP053477.1_390521_391217_+	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
GCF_013137955.1_ASM1313795v1	NZ_CP053477	Staphylococcus warneri strain WB224 chromosome, complete genome	4	784519-784605	4	CRISPRCasFinder	no		cas3,cas9,cas1,cas2,WYL,csa3,cas14j,DEDDh,DinG	Orphan	AAGTACTTCCATTTTAATGGTTAG	24	0	0	NA	NA	NA	1	1	Orphan	cas3,cas9,cas1,cas2,WYL,csa3,cas14j,DEDDh,DinG	NA,NA	NA|192aa|up_9|NZ_CP053477.1_775080_775656_+	COG2180, NarJ, Nitrate reductase delta subunit [Energy production and conversion]	NA|151aa|up_8|NZ_CP053477.1_776347_776800_+	pfam13185, GAF_2, GAF domain	NA|344aa|up_7|NZ_CP053477.1_776809_777841_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|218aa|up_6|NZ_CP053477.1_777863_778517_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|384aa|up_5|NZ_CP053477.1_778946_780098_+	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism]	NA|139aa|up_4|NZ_CP053477.1_780151_780568_-	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|149aa|up_3|NZ_CP053477.1_780806_781253_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|210aa|up_2|NZ_CP053477.1_781417_782047_+	cd02137, MhqN-like, nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN	NA|122aa|up_1|NZ_CP053477.1_782175_782541_+	pfam11337, DUF3139, Protein of unknown function (DUF3139)	NA|426aa|up_0|NZ_CP053477.1_782792_784070_+	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional	NA|115aa|down_0|NZ_CP053477.1_784819_785164_-	pfam16230, DUF4889, Domain of unknown function (DUF4889)	NA|141aa|down_1|NZ_CP053477.1_785526_785949_-	COG3871, COG3871, Uncharacterized stress protein (general stress protein 26) [General function prediction only]	NA|701aa|down_2|NZ_CP053477.1_786025_788128_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|124aa|down_3|NZ_CP053477.1_789066_789438_-	pfam08349, DUF1722, Protein of unknown function (DUF1722)	NA|480aa|down_4|NZ_CP053477.1_789818_791258_+	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|316aa|down_5|NZ_CP053477.1_791328_792276_-	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family	NA|203aa|down_6|NZ_CP053477.1_792337_792946_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|426aa|down_7|NZ_CP053477.1_793108_794386_+	COG1511, COG1511, Predicted membrane protein [Function unknown]	NA|142aa|down_8|NZ_CP053477.1_794502_794928_-	pfam13924, Lipocalin_5, Lipocalin-like domain	NA|252aa|down_9|NZ_CP053477.1_794964_795720_-	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional
GCF_013137955.1_ASM1313795v1	NZ_CP053477	Staphylococcus warneri strain WB224 chromosome, complete genome	5	1682652-1682747	5	CRISPRCasFinder	no		cas3,cas9,cas1,cas2,WYL,csa3,cas14j,DEDDh,DinG	Orphan	TCGGATGCCAAGACGGGTGTATTCCTTTTGAATC	34	1	1	1682686-1682713	NZ_CP053477.1_1682564-1682591	NA	1	1	Orphan	cas3,cas9,cas1,cas2,WYL,csa3,cas14j,DEDDh,DinG	NA,NA|117aa|down_8|NZ_CP053477.1_1692732_1693083_+	NA|103aa|up_9|NZ_CP053477.1_1672939_1673248_+	COG4699, COG4699, Uncharacterized protein conserved in bacteria [Function unknown]	NA|67aa|up_8|NZ_CP053477.1_1673434_1673635_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|422aa|up_7|NZ_CP053477.1_1673923_1675189_-	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase	NA|359aa|up_6|NZ_CP053477.1_1675191_1676268_-	COG0787, Alr, Alanine racemase [Cell envelope biogenesis, outer membrane]	NA|384aa|up_5|NZ_CP053477.1_1676271_1677423_-	cd05670, M20_Acy1_YkuR-like, M20 Peptidase aminoacyclase-1 YkuR-like proteins, including YkuR and Ama/HipO/HyuC proteins	NA|240aa|up_4|NZ_CP053477.1_1677604_1678324_-	TIGR03532, DapD_Ac, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA|241aa|up_3|NZ_CP053477.1_1678347_1679070_-	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|295aa|up_2|NZ_CP053477.1_1679069_1679954_-	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|330aa|up_1|NZ_CP053477.1_1679955_1680945_-	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional	NA|402aa|up_0|NZ_CP053477.1_1681003_1682209_-	PRK06635, PRK06635, aspartate kinase; Reviewed	NA|534aa|down_0|NZ_CP053477.1_1682970_1684572_-	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional	NA|303aa|down_1|NZ_CP053477.1_1684717_1685626_+	COG2996, COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only]	NA|327aa|down_2|NZ_CP053477.1_1685966_1686947_+	cd13654, PBP2_phosphate_like_2, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|309aa|down_3|NZ_CP053477.1_1687133_1688060_+	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|310aa|down_4|NZ_CP053477.1_1688061_1688991_+	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|292aa|down_5|NZ_CP053477.1_1689075_1689951_+	PRK14238, PRK14238, phosphate transporter ATP-binding protein; Provisional	NA|216aa|down_6|NZ_CP053477.1_1689954_1690602_+	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU	NA|604aa|down_7|NZ_CP053477.1_1690721_1692533_-	cd09609, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF)	NA|117aa|down_8|NZ_CP053477.1_1692732_1693083_+	NA	NA|333aa|down_9|NZ_CP053477.1_1693199_1694198_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
