The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP053344	Herbiconiux sp. SALV-R1 chromosome, complete genome	4397911	378827	387583	4397911		Bacillus_phage(33.33%)	8	NA	NA
WP_171703746.1|378827_379121_+	DUF3263 domain-containing protein	NA	A0A1B3AZ99	Gordonia_phage	42.6	2.3e-08
WP_171703747.1|379136_379748_+	LytR C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_171703748.1|379932_380136_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	56.7	9.8e-14
WP_171703749.1|380167_381292_+	DUF3048 domain-containing protein	NA	NA	NA	NA	NA
WP_171703750.1|381409_383029_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	55.0	1.9e-152
WP_171703751.1|383375_385100_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	40.4	9.0e-15
WP_171703752.1|385121_385811_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	38.2	1.0e-38
WP_171703753.1|385942_387583_-	DEAD/DEAH box helicase	NA	B2CRJ8	Acidianus_filamentous_virus	26.3	1.6e-16
>prophage 2
NZ_CP053344	Herbiconiux sp. SALV-R1 chromosome, complete genome	4397911	878584	889825	4397911	protease	Rathayibacter_phage(60.0%)	13	NA	NA
WP_171704146.1|878584_880915_-	hypothetical protein	NA	A0A2R3ZZQ3	Microbacterium_phage	45.5	1.8e-42
WP_171704147.1|880930_881179_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171704148.1|881298_881625_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171704149.1|881717_882572_-	hypothetical protein	NA	A0A1P8VV84	Rathayibacter_phage	41.9	6.6e-43
WP_171704150.1|882651_882924_-	HK97 gp10 family phage protein	NA	A0A1P8VV83	Rathayibacter_phage	56.2	2.6e-17
WP_171704151.1|882920_883346_-	hypothetical protein	NA	A0A1P8VV86	Rathayibacter_phage	59.1	2.8e-42
WP_171704152.1|883358_883724_-	hypothetical protein	NA	A0A1P8VVG1	Rathayibacter_phage	53.2	2.9e-24
WP_171704153.1|883720_884086_-	hypothetical protein	NA	A0A1P8VVF3	Rathayibacter_phage	46.2	3.8e-24
WP_171704154.1|884105_884450_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171704155.1|884446_885376_-	hypothetical protein	NA	A0A142K8P8	Gordonia_phage	63.4	8.0e-103
WP_171704156.1|885403_885772_-	DUF2190 family protein	NA	A0A160DCL2	Gordonia_phage	56.0	3.5e-25
WP_171704157.1|885774_886980_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	G9FH29	Rhodococcus_phage	46.6	8.9e-78
WP_171704158.1|888268_889825_-	hypothetical protein	NA	A0A1P8VV92	Rathayibacter_phage	51.9	1.6e-124
>prophage 3
NZ_CP053344	Herbiconiux sp. SALV-R1 chromosome, complete genome	4397911	895750	903802	4397911		Mycobacterium_phage(50.0%)	12	NA	NA
WP_171704168.1|895750_897040_-	AAA family ATPase	NA	V5R9D2	Arthrobacter_phage	44.3	1.2e-75
WP_171704169.1|897036_897765_-	helix-turn-helix domain-containing protein	NA	R9TPU9	Vibrio_phage	50.7	2.2e-10
WP_171704170.1|897761_897908_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171704171.1|898604_899009_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_171704172.1|899005_899308_-	DUF4406 domain-containing protein	NA	A0A023W747	Mycobacterium_phage	51.1	5.2e-19
WP_171707177.1|899304_900783_-	site-specific DNA-methyltransferase	NA	A0A2P1JRA9	Mycobacterium_phage	50.2	4.5e-132
WP_171704173.1|900839_901040_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171704174.1|901180_901954_-	recombinase RecT	NA	A0A1B1IRH1	uncultured_Mediterranean_phage	40.9	1.7e-26
WP_171704175.1|901950_902568_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171704176.1|902554_902767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171704177.1|902900_903191_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171704178.1|903190_903802_-	hypothetical protein	NA	A0A2K9VEY9	Mycobacterium_phage	25.0	4.2e-07
>prophage 4
NZ_CP053344	Herbiconiux sp. SALV-R1 chromosome, complete genome	4397911	2569098	2582457	4397911	capsid,terminase,head,portal,tail	Gordonia_phage(57.14%)	17	NA	NA
WP_171705592.1|2569098_2571903_-|tail	phage tail tape measure protein	tail	I3NL90	Bifidobacterium_phage	29.1	3.3e-67
WP_171705593.1|2571936_2572194_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171705594.1|2572247_2572931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171705595.1|2573020_2573530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171705596.1|2573567_2573780_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171705597.1|2573779_2574256_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171705598.1|2574252_2574717_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171705599.1|2574716_2575088_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171705600.1|2575120_2575507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171705601.1|2575510_2575918_-	hypothetical protein	NA	A0A159B6B3	Gordonia_phage	31.0	8.9e-06
WP_171705602.1|2575914_2576937_-|capsid	major capsid protein	capsid	A0A2P1A0N3	Gordonia_phage	47.1	1.2e-75
WP_171705603.1|2576949_2577333_-|head	head decoration protein	head	Q6VY52	Streptomyces_phage	58.5	1.1e-34
WP_171705604.1|2577389_2578058_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171705605.1|2578164_2579430_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171705606.1|2579413_2580799_-|portal	phage portal protein	portal	G9FHJ4	Rhodococcus_virus	30.7	6.9e-42
WP_171705607.1|2580809_2581424_-|terminase	terminase	terminase	A0A1C9EHV3	Gordonia_phage	50.0	1.2e-51
WP_171705608.1|2581389_2582457_-|terminase	terminase	terminase	A0A1C9EHW4	Gordonia_phage	54.3	1.3e-109
