The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP053289	Bacillus cereus strain WPySW2 chromosome, complete genome	5328644	968681	976367	5328644		uncultured_Caudovirales_phage(16.67%)	10	NA	NA
WP_001036848.1|968681_969665_+	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.2	1.1e-17
WP_000403758.1|969654_970425_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.1	3.7e-13
WP_001086126.1|970457_971222_+	class B sortase	NA	NA	NA	NA	NA
WP_000587818.1|971294_971618_-	heme oxygenase	NA	NA	NA	NA	NA
WP_065382214.1|971913_973113_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	41.0	4.0e-70
WP_065382215.1|973151_973346_-	YwbE family protein	NA	NA	NA	NA	NA
WP_001293578.1|973346_973520_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000018035.1|973688_974381_+	response regulator transcription factor	NA	B5LWA6	Feldmannia_species_virus	28.8	1.4e-06
WP_065382216.1|974382_975318_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	24.7	9.2e-22
WP_065382217.1|975443_976367_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	43.5	1.2e-45
>prophage 2
NZ_CP053289	Bacillus cereus strain WPySW2 chromosome, complete genome	5328644	1809888	1820055	5328644	bacteriocin	Bacillus_phage(54.55%)	15	NA	NA
WP_011110319.1|1809888_1810548_-	helix-turn-helix domain-containing protein	NA	A0A2H4J441	uncultured_Caudovirales_phage	41.0	4.3e-34
WP_000283431.1|1810751_1810964_+	hypothetical protein	NA	A6M975	Geobacillus_virus	63.0	1.6e-11
WP_063220698.1|1811166_1811925_+	ORF6C domain-containing protein	NA	A0A2H4JBC7	uncultured_Caudovirales_phage	69.0	1.2e-96
WP_001189065.1|1811936_1812131_+	hypothetical protein	NA	A0A1C8E9A1	Bacillus_phage	71.0	1.7e-15
WP_000511420.1|1812283_1813156_+	DnaD domain protein	NA	A0A2H4J394	uncultured_Caudovirales_phage	65.3	6.8e-96
WP_000883316.1|1813162_1813300_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000464425.1|1813274_1813661_+	DUF1492 domain-containing protein	NA	A0A288WG73	Bacillus_phage	71.4	2.6e-47
WP_033692154.1|1813899_1814886_+	lysozyme family protein	NA	A0A223LKM8	Bacillus_phage	43.9	1.7e-34
WP_001051368.1|1815004_1815847_+	M23 family metallopeptidase	NA	A0A218KCJ1	Bacillus_phage	47.7	6.1e-33
WP_000405767.1|1816121_1817018_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	A0A0S2MVR5	Bacillus_phage	52.4	4.1e-80
WP_000392444.1|1817079_1817310_+|bacteriocin	bacteriocin biosynthesis protein	bacteriocin	A0A1B1P7Q9	Bacillus_phage	73.7	1.5e-23
WP_001102628.1|1817681_1818005_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000031383.1|1817997_1818540_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000976237.1|1818540_1819344_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_000413738.1|1819434_1820055_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.2	8.2e-19
>prophage 3
NZ_CP053289	Bacillus cereus strain WPySW2 chromosome, complete genome	5328644	3479729	3488377	5328644		Bacillus_phage(66.67%)	8	NA	NA
WP_065382416.1|3479729_3480602_-	aminoglycoside 6-adenylyltransferase	NA	A0A1X9I6F2	Streptococcus_phage	44.7	4.3e-66
WP_000818985.1|3480903_3481623_-	3-ketoacyl-ACP reductase	NA	W8CYX9	Bacillus_phage	100.0	5.9e-61
WP_065382415.1|3481813_3482407_+	DUF3139 domain-containing protein	NA	NA	NA	NA	NA
WP_139256975.1|3482431_3483505_-	HAMP domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	96.9	3.3e-185
WP_025710347.1|3483501_3484179_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	98.7	3.3e-122
WP_065382156.1|3484264_3486025_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	98.4	6.3e-274
WP_065382155.1|3486265_3487030_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_063219865.1|3487129_3488377_-	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	31.8	3.3e-11
>prophage 4
NZ_CP053289	Bacillus cereus strain WPySW2 chromosome, complete genome	5328644	4700744	4708702	5328644		Bacillus_phage(66.67%)	8	NA	NA
WP_065382254.1|4700744_4702196_-	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	53.6	1.9e-138
WP_000831286.1|4702584_4702929_-	DUF4064 domain-containing protein	NA	A0A0S2MVJ2	Bacillus_phage	78.1	8.5e-42
WP_065382253.1|4702941_4703472_-	DUF4352 domain-containing protein	NA	A0A0S2MVG4	Bacillus_phage	35.0	6.6e-17
WP_065382252.1|4703605_4704853_-	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
WP_006918011.1|4705028_4705706_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.6	1.1e-32
WP_072770181.1|4705717_4707109_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	29.5	1.6e-33
WP_065381813.1|4707122_4707644_-	dihydrofolate reductase	NA	NA	NA	NA	NA
WP_139256957.1|4707739_4708702_+	WYL domain-containing protein	NA	A0A1B0RXM1	Streptococcus_phage	29.4	4.1e-17
>prophage 5
NZ_CP053289	Bacillus cereus strain WPySW2 chromosome, complete genome	5328644	5043897	5052273	5328644		Synechococcus_phage(50.0%)	8	NA	NA
WP_000088589.1|5043897_5044485_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	37.4	9.1e-28
WP_001262439.1|5044481_5045522_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	45.9	1.2e-67
WP_000879025.1|5045627_5047043_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.4	3.3e-55
WP_065382292.1|5047027_5049247_-	phosphoribosylformylglycinamidine synthase II	NA	A6N228	Microbacterium_phage	41.2	2.6e-163
WP_000666774.1|5049230_5049914_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_000278823.1|5049910_5050165_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_001170544.1|5050157_5050877_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	44.3	4.0e-49
WP_000625682.1|5050965_5052273_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	25.3	4.9e-21
>prophage 6
NZ_CP053289	Bacillus cereus strain WPySW2 chromosome, complete genome	5328644	5097845	5105794	5328644		Bacillus_phage(33.33%)	6	NA	NA
WP_000719223.1|5097845_5099351_-	aminopeptidase AmpS	NA	W8CYF6	Bacillus_phage	30.3	5.4e-32
WP_000929885.1|5099334_5100036_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.9	7.3e-40
WP_000833082.1|5100181_5101507_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	30.1	6.4e-45
WP_162840109.1|5101891_5103433_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	31.7	8.9e-22
WP_065382431.1|5103836_5105471_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	57.8	3.4e-157
WP_000917311.1|5105509_5105794_-	co-chaperone GroES	NA	A0A221S3C8	uncultured_virus	54.8	1.2e-20
>prophage 1
NZ_CP053290	Bacillus cereus strain WPySW2 plasmid unnamed, complete sequence	421688	318702	343187	421688	integrase,transposase	Bacillus_phage(57.14%)	26	324337:324353	339787:339803
WP_000156041.1|318702_319935_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0H4TJ57	Erysipelothrix_phage	24.1	2.2e-07
WP_001096999.1|319921_321802_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_000002619.1|321801_322197_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001114979.1|322503_322785_-	YolD-like family protein	NA	NA	NA	NA	NA
WP_001265870.1|323008_324127_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	27.9	5.1e-11
WP_000824133.1|324138_326244_+|integrase	tyrosine-type recombinase/integrase	integrase	L7TK95	Rhizobium_phage	27.0	8.4e-07
324337:324353	attL	GCGGATAATTACAAGGG	NA	NA	NA	NA
WP_000205101.1|326236_326617_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001082941.1|326945_327653_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011040467.1|327779_328823_+	collagen-like protein	NA	NA	NA	NA	NA
WP_017562367.1|328935_329280_+	DUF3992 domain-containing protein	NA	NA	NA	NA	NA
WP_000272590.1|329424_330690_-	Y-family DNA polymerase	NA	O64031	Bacillus_phage	47.4	2.6e-104
WP_000273950.1|330914_331286_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000899536.1|331470_331710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154698455.1|331746_331884_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000355316.1|332149_332896_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001045035.1|333367_333634_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000475303.1|333969_335610_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001004561.1|335822_337046_+	hypothetical protein	NA	A0A1B1P895	Bacillus_phage	62.7	5.6e-144
WP_000721800.1|337042_337198_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001021532.1|337400_338444_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0E3T6D9	Bacillus_phage	22.9	2.6e-09
WP_000202840.1|338675_339026_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_000385108.1|339047_339560_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000394773.1|340076_340232_+	hypothetical protein	NA	NA	NA	NA	NA
339787:339803	attR	GCGGATAATTACAAGGG	NA	NA	NA	NA
WP_000751948.1|340565_341168_-	hypothetical protein	NA	A0A1B0T6B1	Bacillus_phage	43.0	2.2e-13
WP_000467112.1|341268_341511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001053964.1|341750_343187_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
