The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP038448	Aeromonas media strain R50-22 chromosome, complete genome	4748464	38	62990	4748464	transposase	Escherichia_phage(23.81%)	52	NA	NA
WP_012564931.1|38_986_-|transposase	IS30-like element ISAeca1 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	36.9	1.0e-44
WP_171269884.1|1195_2242_-	EpsG family protein	NA	NA	NA	NA	NA
WP_171269997.1|2252_3308_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_171269885.1|3345_4440_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_171269998.1|4436_5393_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_171269886.1|5974_7225_-	O-antigen translocase	NA	NA	NA	NA	NA
WP_171269887.1|7221_8325_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	E5ES42	Bathycoccus_sp._RCC1105_virus	32.8	4.1e-45
WP_171269888.1|8321_9239_-	WxcM-like domain-containing protein	NA	NA	NA	NA	NA
WP_171269889.1|9317_10178_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.9	8.5e-107
WP_171269890.1|10174_11263_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	51.2	1.2e-97
WP_171269891.1|11314_12394_-	UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase	NA	NA	NA	NA	NA
WP_171269892.1|12863_14849_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	26.5	5.3e-19
WP_171269999.1|14845_15874_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_171269893.1|15880_16831_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
WP_171269894.1|16830_17643_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_052815422.1|17651_18371_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.6	5.2e-09
WP_171269895.1|18374_19118_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_171269896.1|19121_20045_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_080989948.1|20064_21105_-	acyltransferase	NA	NA	NA	NA	NA
WP_080989947.1|21123_21933_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_171269897.1|21934_23824_-	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_171269898.1|23869_24415_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	4.9e-52
WP_052815420.1|24446_25325_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.1	4.8e-105
WP_080989944.1|25328_26234_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_052815419.1|26233_27319_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	52.2	1.3e-96
WP_005342491.1|27852_28803_-|transposase	IS1595-like element ISKpn3 family transposase	transposase	NA	NA	NA	NA
WP_171269899.1|29448_30123_+	response regulator	NA	W8CYM9	Bacillus_phage	34.6	2.8e-28
WP_171269900.1|30122_31505_+	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_039041241.1|31880_32849_-	glucokinase	NA	NA	NA	NA	NA
WP_167332173.1|33197_34052_+	transcriptional regulator HexR	NA	NA	NA	NA	NA
WP_005324189.1|34212_35652_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_171269901.1|35718_36762_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_171269902.1|36777_39840_-	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	25.2	2.7e-70
WP_171269903.1|40001_42326_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_005324182.1|42373_43027_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_161506976.1|43495_44236_+	phosphatase	NA	NA	NA	NA	NA
WP_171270000.1|44862_45552_-	RNA ligase family protein	NA	A0A2H4UUE0	Bodo_saltans_virus	43.5	3.0e-06
WP_171269904.1|45566_46094_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269905.1|46090_47302_-	DUF3696 domain-containing protein	NA	NA	NA	NA	NA
WP_171269906.1|48269_49406_+|transposase	ISAs1-like element ISAs12 family transposase	transposase	NA	NA	NA	NA
WP_099992639.1|50028_51045_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.7	9.8e-187
WP_004576012.1|51805_53224_+|transposase	IS66-like element ISAs21 family transposase	transposase	NA	NA	NA	NA
WP_041205574.1|53234_53660_-|transposase	IS200/IS605-like element ISAeme8 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	46.9	4.9e-23
WP_041206863.1|53717_54857_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SLN2	Escherichia_phage	68.7	7.2e-146
WP_005328266.1|55060_55396_+	addiction module protein	NA	A0A141GEX6	Brucella_phage	46.4	2.0e-11
WP_041206074.1|55401_55716_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_005328262.1|56281_56434_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041206077.1|57206_57962_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	51.5	2.6e-59
WP_041206078.1|57976_59518_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	46.4	2.5e-125
WP_041206863.1|60168_61308_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SLN2	Escherichia_phage	68.7	7.2e-146
WP_099369027.1|61426_62443_+|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.1	4.9e-186
WP_171270001.1|62564_62990_+|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	46.9	3.8e-23
>prophage 2
NZ_CP038448	Aeromonas media strain R50-22 chromosome, complete genome	4748464	108925	184861	4748464	transposase	Escherichia_phage(13.33%)	56	NA	NA
WP_041205253.1|108925_110263_+|transposase	IS4-like element ISAeme15 family transposase	transposase	NA	NA	NA	NA
WP_041205380.1|110304_110730_-	Hsp20/alpha crystallin family protein	NA	A0A1B2LRT2	Wolbachia_phage	40.0	3.9e-12
WP_005326910.1|111007_112654_+	response regulator	NA	NA	NA	NA	NA
WP_041206863.1|112717_113857_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SLN2	Escherichia_phage	68.7	7.2e-146
WP_041205574.1|113914_114340_+|transposase	IS200/IS605-like element ISAeme8 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	46.9	4.9e-23
WP_041205379.1|114451_115414_+	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_041205378.1|115639_116446_+	exodeoxyribonuclease III	NA	A0A0N9QXX6	Chrysochromulina_ericina_virus	27.5	5.7e-12
WP_171268788.1|116644_117139_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171268787.1|117428_118937_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_171268786.1|119010_122139_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_171268785.1|122183_122561_+	copper-binding protein	NA	NA	NA	NA	NA
WP_171268784.1|122634_124329_-	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
WP_103261429.1|124505_125519_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_171268783.1|125930_128375_+	diguanylate cyclase	NA	G3MA91	Bacillus_virus	36.2	4.8e-22
WP_171269913.1|128408_131591_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_171270004.1|131583_132654_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_171269914.1|132695_133154_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_171269915.1|133167_133581_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_171269916.1|133580_133895_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_043132505.1|133987_134173_+	DUF2892 domain-containing protein	NA	NA	NA	NA	NA
WP_041205364.1|134538_134943_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042649827.1|135165_135894_+	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	39.3	1.5e-11
WP_171277300.1|135856_136990_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_171268777.1|137017_138433_-	sucrose-6-phosphate hydrolase	NA	NA	NA	NA	NA
WP_005330304.1|138432_139797_-	PTS sucrose transporter subunit IIBC	NA	NA	NA	NA	NA
WP_171269917.1|139868_140846_-	aminoimidazole riboside kinase	NA	NA	NA	NA	NA
WP_171269918.1|140958_142443_-	carbohydrate porin	NA	NA	NA	NA	NA
WP_005330311.1|142705_143842_-	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	35.1	3.1e-24
WP_041205360.1|144095_146021_-	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	51.0	1.1e-151
WP_025327678.1|146355_146931_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_005332581.1|147194_148079_+	NAD(+) kinase	NA	NA	NA	NA	NA
WP_042649835.1|149525_151190_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_171269919.1|151725_152607_+	DHH family phosphoesterase	NA	NA	NA	NA	NA
WP_171269920.1|153003_153444_+	universal stress protein	NA	NA	NA	NA	NA
WP_171268771.1|153690_154854_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_171269921.1|154850_156890_+	MacB family efflux pump subunit	NA	G9BWD6	Planktothrix_phage	39.9	2.4e-35
WP_171269452.1|156949_158284_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_171268769.1|158415_159222_+	siderophore-interacting protein	NA	NA	NA	NA	NA
WP_171269922.1|159480_160587_+	3-deoxy-7-phosphoheptulonate synthase	NA	A0A218MA87	Escherichia_phage	47.3	2.7e-81
WP_005332615.1|161062_161470_-	H-NS histone family protein	NA	NA	NA	NA	NA
WP_043132497.1|161878_162823_-	DNA-binding transcriptional regulator DsdC	NA	NA	NA	NA	NA
WP_171269923.1|163053_164391_+	D-serine transporter DsdX	NA	NA	NA	NA	NA
WP_171269924.1|164408_165740_+	D-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_005328937.1|166070_166247_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005328927.1|166344_167598_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	72.2	1.6e-13
WP_171268764.1|167795_168671_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_139750679.1|168800_170000_+	mannose-6-phosphate isomerase, class I	NA	NA	NA	NA	NA
WP_139750680.1|170187_170736_+	YgjV family protein	NA	NA	NA	NA	NA
WP_005328920.1|170875_171025_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269926.1|173781_176106_-	Ig-like domain-containing protein	NA	J9Q6D6	Salmonella_phage	27.6	6.7e-05
WP_171269265.1|177214_178246_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_043132489.1|178285_178729_+	CopD family protein	NA	NA	NA	NA	NA
WP_171269927.1|179064_179928_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041206012.1|180289_181852_+|transposase	IS21-like element ISAs28 family transposase	transposase	K4I413	Acidithiobacillus_phage	46.2	3.3e-125
WP_021141277.1|181875_182631_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	45.4	2.4e-52
WP_171269928.1|183913_184861_+|transposase	IS30-like element ISAs2 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.4	3.1e-41
>prophage 3
NZ_CP038448	Aeromonas media strain R50-22 chromosome, complete genome	4748464	305992	352852	4748464	transposase,protease,tRNA	Bodo_saltans_virus(12.5%)	36	NA	NA
WP_041205257.1|305992_307000_-|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	29.4	7.8e-19
WP_171268702.1|307221_307977_+	YciK family oxidoreductase	NA	NA	NA	NA	NA
WP_005331279.1|308064_308949_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_171268701.1|309017_310190_-	MFS transporter	NA	NA	NA	NA	NA
WP_171268700.1|310353_311496_+	putative C-S lyase	NA	NA	NA	NA	NA
WP_171268699.1|311847_313170_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_163147847.1|313248_314157_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_025326213.1|314327_315584_+	adenylosuccinate synthetase	NA	A0A2R8FF47	Brazilian_cedratvirus	31.5	6.5e-47
WP_171268698.1|315853_316390_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_171268697.1|316401_317205_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_171268696.1|317389_319870_+	alpha-glucosidase	NA	NA	NA	NA	NA
WP_171269936.1|319944_321144_-|tRNA	tyrosine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_171268694.1|321258_322578_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A1P8BKT8	Lactococcus_phage	48.7	1.0e-18
WP_171268693.1|322634_323759_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA	NA
WP_171268692.1|323850_324132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010676219.1|324673_325771_+|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_005327996.1|327621_329040_-|transposase	IS66-like element ISUnCu16 family transposase	transposase	NA	NA	NA	NA
WP_171269447.1|330225_330501_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171268691.1|331000_332992_-	transketolase	NA	NA	NA	NA	NA
WP_025326202.1|333333_334485_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	62.6	4.7e-129
WP_171268690.1|334553_335093_+|protease	SprT family zinc-dependent metalloprotease	protease	A0A060AI19	Cronobacter_phage	28.0	5.9e-05
WP_171268689.1|335166_335865_+	endonuclease	NA	NA	NA	NA	NA
WP_171268688.1|335934_336666_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_163136244.1|336717_337668_+	glutathione synthase	NA	NA	NA	NA	NA
WP_171268687.1|337863_338418_+	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_025326196.1|338738_339161_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_171269446.1|339188_340202_-	HTH-type transcriptional regulator YidZ	NA	NA	NA	NA	NA
WP_171268686.1|340220_341393_-	MFS transporter	NA	NA	NA	NA	NA
WP_041205051.1|341811_343149_-|transposase	IS4-like element ISAeme15 family transposase	transposase	NA	NA	NA	NA
WP_041205244.1|344501_345941_-	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_041206846.1|346685_347636_+	transaldolase	NA	A0A127KNC6	Cyanophage	30.7	2.7e-13
WP_025326190.1|347829_348009_+	DUF3545 family protein	NA	NA	NA	NA	NA
WP_041205240.1|348105_348654_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_171268685.1|348838_349525_-	uracil-DNA glycosylase	NA	A0A0A7D9F8	Equid_alphaherpesvirus	49.3	4.3e-53
WP_005330139.1|350116_350497_+	autonomous glycyl radical cofactor GrcA	NA	A0A219YAN3	Aeromonas_phage	59.5	2.8e-30
WP_042650017.1|351808_352852_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP038448	Aeromonas media strain R50-22 chromosome, complete genome	4748464	701239	777964	4748464	transposase	Bacillus_phage(22.22%)	48	NA	NA
WP_005342491.1|701239_702190_+|transposase	IS1595-like element ISKpn3 family transposase	transposase	NA	NA	NA	NA
WP_099368923.1|703261_704278_+|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.4	3.7e-186
WP_042648917.1|705350_705956_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_042648916.1|706101_706692_+	MliC family protein	NA	NA	NA	NA	NA
WP_042648915.1|706753_708262_-	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_042648914.1|708536_709463_-	L,D-transpeptidase family protein	NA	NA	NA	NA	NA
WP_042648913.1|709642_710884_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_042648912.1|711017_712217_-	acetate kinase	NA	NA	NA	NA	NA
WP_042648911.1|712736_713207_-	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA	NA
WP_025325894.1|713507_714614_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_042648919.1|714833_715385_-	ribosomal protein S5-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_025325892.1|715446_716007_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_042648910.1|716355_718125_+	M4 family metallopeptidase	NA	NA	NA	NA	NA
WP_042648909.1|718171_719071_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042648908.1|719279_720473_+	multidrug efflux MFS transporter MdtH	NA	NA	NA	NA	NA
WP_171277302.1|720675_738792_-	Ig-like domain-containing protein	NA	NA	NA	NA	NA
WP_042649094.1|739015_740677_-	putative transporter	NA	NA	NA	NA	NA
WP_042649093.1|740794_741430_-	hemolysin III family protein	NA	NA	NA	NA	NA
WP_042649092.1|741664_743197_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_042649091.1|743333_743885_+	septation protein A	NA	NA	NA	NA	NA
WP_025325883.1|743909_744206_+	YciI family protein	NA	NA	NA	NA	NA
WP_042649090.1|744295_745051_-	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA	NA
WP_042649089.1|745216_745537_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_042649088.1|745630_746542_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	45.9	2.0e-61
WP_042649087.1|746755_748153_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	38.8	1.4e-79
WP_042649086.1|748225_749197_-	response regulator	NA	NA	NA	NA	NA
WP_042649095.1|749509_750184_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042649085.1|750250_751105_+	ATP-binding protein	NA	A0A1B1P8D0	Bacillus_phage	28.4	4.8e-09
WP_042649084.1|751232_751868_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_042649083.1|751946_753146_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_042649082.1|753142_754285_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_041206813.1|754284_755262_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_005327981.1|755362_756721_-	TolC family protein	NA	NA	NA	NA	NA
WP_119196704.1|757532_758801_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	33.7	2.3e-60
WP_119196703.1|758805_762063_-	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
WP_119196702.1|762063_763341_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_119196699.1|763337_765365_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
WP_005309538.1|766173_766470_+	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA	NA
WP_042649080.1|767027_768452_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042649079.1|768650_769847_-	J domain-containing protein	NA	NA	NA	NA	NA
WP_042649078.1|770005_770656_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196733.1|770639_771971_-	AAA family ATPase	NA	C7BGE8	Burkholderia_phage	30.6	8.2e-08
WP_171269942.1|772258_772474_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171268592.1|772750_773506_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	50.6	2.2e-58
WP_158196731.1|773520_775062_-|transposase	IS21-like element ISAs29 family transposase	transposase	K4I413	Acidithiobacillus_phage	47.4	1.3e-129
WP_158196730.1|775238_775466_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196729.1|775452_776961_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_158196728.1|777214_777964_+|transposase	IS5 family transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	36.9	7.3e-14
>prophage 5
NZ_CP038448	Aeromonas media strain R50-22 chromosome, complete genome	4748464	786244	839609	4748464	transposase,integrase,tRNA	uncultured_Caudovirales_phage(33.33%)	50	778926:778942	843962:843978
778926:778942	attL	CAGGCCATCCTCGGCCA	NA	NA	NA	NA
WP_171269945.1|786244_787306_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_042650017.1|788277_789321_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_021141311.1|790746_791883_-|transposase	ISAs1-like element ISAs12 family transposase	transposase	NA	NA	NA	NA
WP_171269946.1|792641_792815_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171268589.1|792852_794817_+	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	35.6	3.6e-20
WP_158196722.1|795536_796965_+|transposase	IS66-like element ISAeme23 family transposase	transposase	NA	NA	NA	NA
WP_042054148.1|797164_797500_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA	NA
WP_158196721.1|797574_797889_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196720.1|797978_798275_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196719.1|798307_798649_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029303521.1|798650_799193_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196718.1|799272_799635_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196717.1|799631_799847_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196716.1|799843_800353_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158198333.1|800469_800718_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196715.1|800832_801024_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196714.1|801020_801518_-	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_158196713.1|801885_802314_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269439.1|802324_802750_-	DUF2787 family protein	NA	NA	NA	NA	NA
WP_158196711.1|802785_803349_-	lecithin retinol acyltransferase family protein	NA	NA	NA	NA	NA
WP_158196710.1|803436_804111_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042034774.1|804122_804275_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196709.1|804286_804640_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024945142.1|804921_805266_+	helix-turn-helix transcriptional regulator	NA	A0A2H4J5G9	uncultured_Caudovirales_phage	34.3	1.5e-06
WP_171269947.1|805412_806387_-	inovirus-type Gp2 protein	NA	NA	NA	NA	NA
WP_021137981.1|806804_807017_-	AlpA family transcriptional regulator	NA	A0A1V0E8E5	Vibrio_phage	35.9	1.8e-05
WP_158196706.1|807403_808453_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010674210.1|808584_810198_-|transposase	IS1634-like element ISAs25 family transposase	transposase	NA	NA	NA	NA
WP_171270005.1|810314_810668_+	H-NS histone family protein	NA	NA	NA	NA	NA
WP_158196703.1|811723_812941_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	49.9	1.6e-103
WP_042649676.1|813187_813820_-	LysE family translocator	NA	NA	NA	NA	NA
WP_025328177.1|819884_820235_-	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	49.5	6.7e-26
WP_042649482.1|820324_821017_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042649481.1|821104_822499_-	H(+)/Cl(-) exchange transporter ClcA	NA	NA	NA	NA	NA
WP_042649480.1|822721_824008_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_042649483.1|824218_825043_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042649479.1|825081_826002_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_042649478.1|826248_826965_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_042649477.1|827174_827690_+	DUF2937 family protein	NA	NA	NA	NA	NA
WP_042649476.1|827753_828635_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042649475.1|828793_829186_+	multidrug transporter	NA	NA	NA	NA	NA
WP_042649474.1|829173_829494_+	ligand-binding protein SH3	NA	NA	NA	NA	NA
WP_041205253.1|829593_830931_-|transposase	IS4-like element ISAeme15 family transposase	transposase	NA	NA	NA	NA
WP_042650422.1|831016_831427_-	VOC family protein	NA	NA	NA	NA	NA
WP_005327576.1|831469_833791_-	penicillin-binding protein 1B	NA	NA	NA	NA	NA
WP_042650421.1|834055_836503_-	ATP-dependent helicase HrpB	NA	A0A0G2Y9F4	Acanthamoeba_polyphaga_mimivirus	27.8	2.9e-27
WP_005327573.1|836739_837285_+	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA	NA
WP_005327571.1|837281_838019_+	DNA/RNA nuclease SfsA	NA	NA	NA	NA	NA
WP_005329052.1|838144_838594_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_041206812.1|838706_839609_+|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	tRNA	NA	NA	NA	NA
843962:843978	attR	TGGCCGAGGATGGCCTG	NA	NA	NA	NA
>prophage 6
NZ_CP038448	Aeromonas media strain R50-22 chromosome, complete genome	4748464	884454	898295	4748464	transposase,tRNA	Acidithiobacillus_phage(20.0%)	12	NA	NA
WP_042061740.1|884454_886017_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	46.2	8.2e-124
WP_024945936.1|886042_886798_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	45.4	6.9e-52
WP_081805626.1|888319_890185_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	32.6	1.1e-34
WP_005331907.1|890398_892186_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.4	4.0e-74
WP_005331908.1|892274_892718_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	48.6	2.0e-27
WP_005309452.1|892733_892949_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_005331910.1|893128_894142_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.6	3.1e-108
WP_005331913.1|894229_895213_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	33.7	4.9e-34
WP_041205045.1|895259_896324_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0A7NU10	Lactobacillus_phage	36.2	4.9e-11
WP_041205044.1|896333_896915_-	DedA family protein	NA	NA	NA	NA	NA
WP_005332743.1|896911_897529_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.4	2.4e-34
WP_042648740.1|897533_898295_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	53.4	3.3e-70
>prophage 7
NZ_CP038448	Aeromonas media strain R50-22 chromosome, complete genome	4748464	1323544	1363794	4748464	transposase	Bacillus_phage(66.67%)	44	NA	NA
WP_021141311.1|1323544_1324681_+|transposase	ISAs1-like element ISAs12 family transposase	transposase	NA	NA	NA	NA
WP_042650017.1|1325291_1326335_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_005307999.1|1333218_1333602_-	50S ribosomal protein L17	NA	NA	NA	NA	NA
WP_005307997.1|1333645_1334635_-	DNA-directed RNA polymerase subunit alpha	NA	NA	NA	NA	NA
WP_010672568.1|1334660_1335281_-	30S ribosomal protein S4	NA	NA	NA	NA	NA
WP_005319702.1|1335320_1335710_-	30S ribosomal protein S11	NA	NA	NA	NA	NA
WP_005307991.1|1335724_1336081_-	30S ribosomal protein S13	NA	NA	NA	NA	NA
WP_005319705.1|1336220_1336334_-	50S ribosomal protein L36	NA	NA	NA	NA	NA
WP_005307989.1|1336361_1337690_-	preprotein translocase subunit SecY	NA	NA	NA	NA	NA
WP_025325390.1|1337698_1338136_-	50S ribosomal protein L15	NA	NA	NA	NA	NA
WP_005307985.1|1338138_1338318_-	50S ribosomal protein L30	NA	NA	NA	NA	NA
WP_005340605.1|1338324_1338825_-	30S ribosomal protein S5	NA	NA	NA	NA	NA
WP_033130012.1|1338839_1339193_-	50S ribosomal protein L18	NA	NA	NA	NA	NA
WP_025325388.1|1339202_1339736_-	50S ribosomal protein L6	NA	NA	NA	NA	NA
WP_042648861.1|1339749_1340142_-	30S ribosomal protein S8	NA	NA	NA	NA	NA
WP_005331161.1|1340161_1340467_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_005331162.1|1340477_1341017_-	50S ribosomal protein L5	NA	NA	NA	NA	NA
WP_025325387.1|1341030_1341348_-	50S ribosomal protein L24	NA	NA	NA	NA	NA
WP_005307975.1|1341359_1341728_-	50S ribosomal protein L14	NA	NA	NA	NA	NA
WP_005307966.1|1341876_1342125_-	30S ribosomal protein S17	NA	NA	NA	NA	NA
WP_005307965.1|1342124_1342316_-	50S ribosomal protein L29	NA	NA	NA	NA	NA
WP_005307963.1|1342315_1342729_-	50S ribosomal protein L16	NA	NA	NA	NA	NA
WP_005331168.1|1342742_1343456_-	30S ribosomal protein S3	NA	NA	NA	NA	NA
WP_005319741.1|1343459_1343804_-	50S ribosomal protein L22	NA	NA	NA	NA	NA
WP_005307960.1|1343814_1344093_-	30S ribosomal protein S19	NA	NA	NA	NA	NA
WP_005331177.1|1344115_1344937_-	50S ribosomal protein L2	NA	NA	NA	NA	NA
WP_005331199.1|1344952_1345255_-	50S ribosomal protein L23	NA	NA	NA	NA	NA
WP_025325386.1|1345251_1345857_-	50S ribosomal protein L4	NA	NA	NA	NA	NA
WP_025325385.1|1345874_1346507_-	50S ribosomal protein L3	NA	NA	NA	NA	NA
WP_005307944.1|1346529_1346841_-	30S ribosomal protein S10	NA	NA	NA	NA	NA
WP_042648862.1|1347197_1348112_+	DMT family transporter	NA	NA	NA	NA	NA
WP_042648863.1|1348149_1349460_-	two-component system sensor histidine kinase EnvZ	NA	W8CYF6	Bacillus_phage	23.1	1.2e-11
WP_005328510.1|1349456_1350176_-	two-component system response regulator OmpR	NA	W8CYM9	Bacillus_phage	34.2	5.7e-32
WP_161646994.1|1350675_1351953_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004576012.1|1352417_1353836_-|transposase	IS66-like element ISAs21 family transposase	transposase	NA	NA	NA	NA
WP_171269951.1|1353891_1354677_+	hypothetical protein	NA	NA	NA	NA	NA
WP_161646995.1|1354864_1355758_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171270006.1|1356712_1357747_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	31.5	8.0e-27
WP_171269952.1|1357743_1359018_-|transposase	IS4-like element ISApu2 family transposase	transposase	NA	NA	NA	NA
WP_004099020.1|1359174_1359546_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011191342.1|1359863_1361132_+|transposase	IS4-like element ISApu1 family transposase	transposase	NA	NA	NA	NA
WP_171269953.1|1361509_1362118_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_171269954.1|1362202_1362418_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021141311.1|1362657_1363794_-|transposase	ISAs1-like element ISAs12 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP038448	Aeromonas media strain R50-22 chromosome, complete genome	4748464	2264655	2323369	4748464	transposase,integrase,protease,tRNA	Diachasmimorpha_longicaudata_entomopoxvirus(12.5%)	59	2294262:2294275	2323299:2323312
WP_042649784.1|2264655_2265642_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_041206428.1|2265778_2266237_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA	NA
WP_005332255.1|2266226_2266688_+	chemotaxis protein CheX	NA	NA	NA	NA	NA
WP_005332257.1|2266693_2266921_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041207086.1|2267009_2268317_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
WP_042649785.1|2268508_2269219_-|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
WP_042649786.1|2269347_2270571_+	ATP-dependent RNA helicase SrmB	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	28.8	3.5e-45
WP_042649787.1|2270756_2271530_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_171269317.1|2272697_2273732_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA	NA
WP_171269316.1|2273771_2274473_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_171269315.1|2274632_2275460_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_025325667.1|2275483_2276035_+	YggT family protein	NA	NA	NA	NA	NA
WP_043128939.1|2276034_2276343_+	YggU family protein	NA	NA	NA	NA	NA
WP_041206420.1|2276347_2276767_+	DUF4426 domain-containing protein	NA	NA	NA	NA	NA
WP_171269314.1|2276846_2277677_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_005332293.1|2277871_2278168_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005332296.1|2278218_2278593_-	YacL family protein	NA	NA	NA	NA	NA
WP_171269313.1|2278941_2280057_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_025325674.1|2280176_2281439_+	GntP family permease	NA	NA	NA	NA	NA
WP_171269532.1|2281448_2282582_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	39.0	7.1e-45
WP_171269311.1|2282784_2283348_+	NnrU family protein	NA	NA	NA	NA	NA
WP_171269310.1|2283407_2283944_+	glutathione peroxidase	NA	NA	NA	NA	NA
WP_042649797.1|2284026_2284962_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_171269533.1|2285144_2286341_+	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA	NA
WP_171269308.1|2286851_2287346_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	51.9	3.7e-22
WP_171269307.1|2287373_2287790_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_005332325.1|2287991_2288330_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_005332327.1|2288559_2289570_+	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_171269306.1|2289609_2291235_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_139751234.1|2291307_2292342_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	32.1	3.7e-24
WP_005332333.1|2292423_2293329_+	Dyp-type peroxidase	NA	NA	NA	NA	NA
WP_005308670.1|2293407_2293878_-	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_171269305.1|2294078_2294819_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	34.3	3.3e-22
2294262:2294275	attL	GCCGACAGTGAATT	NA	NA	NA	NA
WP_005332335.1|2294843_2295581_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_005332336.1|2295584_2296235_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA	NA
WP_042649806.1|2296237_2296900_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA	NA
WP_041206414.1|2297142_2298078_+	malate dehydrogenase	NA	NA	NA	NA	NA
WP_171277299.1|2298232_2298472_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269304.1|2299188_2300382_-	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_041206413.1|2300493_2300961_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_041206412.1|2300992_2302273_-	DUF21 domain-containing protein	NA	NA	NA	NA	NA
WP_171269303.1|2302313_2303105_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_171269302.1|2303391_2304771_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_042649810.1|2304950_2305199_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_005332346.1|2305223_2305745_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_041206410.1|2305779_2306529_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_005313505.1|2306561_2306909_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_171269301.1|2307014_2307344_-	1,4-alpha-glucan branching protein	NA	NA	NA	NA	NA
WP_042649812.1|2307427_2308102_-	DNA mismatch repair endonuclease MutH	NA	NA	NA	NA	NA
WP_041206409.1|2308836_2309364_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_171269300.1|2309377_2311657_+	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	28.0	1.2e-11
WP_041207083.1|2311724_2312552_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_042649815.1|2313201_2314416_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_010674210.1|2314617_2316231_+|transposase	IS1634-like element ISAs25 family transposase	transposase	NA	NA	NA	NA
WP_171269299.1|2316296_2318612_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_021141270.1|2318608_2320624_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_021141269.1|2320620_2321103_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042650619.1|2321099_2321933_+	thymidylate synthase	NA	E5DV96	Deep-sea_thermophilic_phage	61.0	3.2e-95
WP_001310555.1|2322352_2323369_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.7	9.8e-187
2323299:2323312	attR	AATTCACTGTCGGC	NA	NA	NA	NA
>prophage 9
NZ_CP038448	Aeromonas media strain R50-22 chromosome, complete genome	4748464	3432989	3493173	4748464	transposase	Escherichia_phage(50.0%)	47	NA	NA
WP_171269628.1|3432989_3433955_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_042650017.1|3434018_3435062_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_005331601.1|3435463_3435781_+	heavy metal-binding domain-containing protein	NA	NA	NA	NA	NA
WP_171269629.1|3435941_3436952_+	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_171269630.1|3437297_3439559_-	LTA synthase family protein	NA	NA	NA	NA	NA
WP_042648302.1|3439809_3440904_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005327565.1|3441040_3442393_-	lysine-sensitive aspartokinase 3	NA	NA	NA	NA	NA
WP_148304685.1|3442457_3442637_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042648311.1|3442810_3444139_-	amino-acid N-acetyltransferase	NA	NA	NA	NA	NA
WP_005327561.1|3444391_3445024_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_042648312.1|3445290_3445626_-	DUF3802 family protein	NA	NA	NA	NA	NA
WP_171268989.1|3445637_3446174_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_042648304.1|3446179_3446551_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_171269631.1|3446659_3447469_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_171269632.1|3447507_3448413_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_171269633.1|3448548_3450246_+	L-lactate permease	NA	NA	NA	NA	NA
WP_171269979.1|3450259_3451036_+	(Fe-S)-binding protein	NA	NA	NA	NA	NA
WP_171269634.1|3451028_3452465_+	iron-sulfur cluster-binding protein	NA	NA	NA	NA	NA
WP_171269635.1|3452466_3453111_+	LUD domain-containing protein	NA	NA	NA	NA	NA
WP_171269636.1|3453110_3455903_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_171269637.1|3456032_3456896_-	class A beta-lactamase	NA	A0A077SL40	Escherichia_phage	41.3	1.5e-50
WP_171269638.1|3458458_3458998_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010674210.1|3458969_3460583_-|transposase	IS1634-like element ISAs25 family transposase	transposase	NA	NA	NA	NA
WP_171269639.1|3460654_3461197_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099368881.1|3461241_3462258_+|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.4	2.2e-186
WP_171269640.1|3462366_3463059_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269980.1|3463774_3464827_-	carotenoid 1,2-hydratase	NA	NA	NA	NA	NA
WP_171269641.1|3465012_3467433_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_171269642.1|3467454_3468135_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.0	1.5e-29
WP_171269643.1|3468287_3468761_+	DUF4357 domain-containing protein	NA	NA	NA	NA	NA
WP_171269644.1|3468886_3470314_+	sodium:proton antiporter NhaD	NA	NA	NA	NA	NA
WP_171269981.1|3470343_3470910_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_171269645.1|3470990_3472193_-	Bcr/CflA family multidrug efflux MFS transporter	NA	S4TR35	Salmonella_phage	25.4	1.2e-21
WP_171269646.1|3472309_3473956_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269647.1|3474043_3475306_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269982.1|3475411_3475984_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269648.1|3476096_3477518_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_171269649.1|3477597_3478422_-	FTR1 family protein	NA	NA	NA	NA	NA
WP_005327423.1|3481394_3481844_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269651.1|3481967_3482453_-	YqhA family protein	NA	NA	NA	NA	NA
WP_171269653.1|3483252_3484053_-	transglutaminase family protein	NA	NA	NA	NA	NA
WP_005327429.1|3484049_3484976_-	alpha-E domain-containing protein	NA	NA	NA	NA	NA
WP_171269654.1|3484969_3486406_-	circularly permuted type 2 ATP-grasp protein	NA	NA	NA	NA	NA
WP_171269655.1|3486923_3487295_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269656.1|3487428_3489165_+	C4-dicarboxylic acid transporter DauA	NA	A0A2H4J153	uncultured_Caudovirales_phage	23.3	2.2e-29
WP_010676219.1|3490388_3491486_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_099368881.1|3492156_3493173_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.4	2.2e-186
>prophage 10
NZ_CP038448	Aeromonas media strain R50-22 chromosome, complete genome	4748464	3583673	3605440	4748464	integrase,terminase,capsid,holin,portal,head,protease	Aeromonas_phage(21.05%)	32	3576770:3576784	3609644:3609658
3576770:3576784	attL	ACAGTGCCGAGGCCA	NA	NA	NA	NA
WP_171269702.1|3583673_3584867_+|integrase	site-specific integrase	integrase	K7P7J2	Enterobacteria_phage	45.3	1.0e-86
WP_102948335.1|3584813_3585008_-	hypothetical protein	NA	NA	NA	NA	NA
WP_102948336.1|3585016_3585433_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269703.1|3587120_3587651_-	class I SAM-dependent methyltransferase	NA	A0A0N7IRF6	Acinetobacter_phage	59.9	4.5e-58
WP_171269704.1|3587647_3587992_-	DUF4406 domain-containing protein	NA	A0A1I9KFD3	Aeromonas_phage	64.8	3.2e-25
WP_171269705.1|3588182_3589391_-	hypothetical protein	NA	A0A291AUQ1	Sinorhizobium_phage	36.2	6.4e-68
WP_171269706.1|3589380_3590445_-	nucleoid-associated protein	NA	A0A291AUQ0	Sinorhizobium_phage	42.1	2.5e-63
WP_080944298.1|3590553_3591204_-	helix-turn-helix domain-containing protein	NA	A0A1I9KG86	Aeromonas_phage	48.7	3.5e-44
WP_045525005.1|3591291_3591477_+	hypothetical protein	NA	H9C161	Pectobacterium_phage	46.3	3.6e-07
WP_171269986.1|3591503_3591995_+	phage regulatory CII family protein	NA	NA	NA	NA	NA
WP_171269987.1|3592072_3592276_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269707.1|3592265_3592532_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269708.1|3592584_3593595_+	hypothetical protein	NA	A0A1I9KG10	Aeromonas_phage	45.7	5.2e-31
WP_171269709.1|3593572_3594058_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269710.1|3594057_3594339_+	hypothetical protein	NA	NA	NA	NA	NA
WP_102948395.1|3594424_3595126_+	phage antirepressor KilAC domain-containing protein	NA	A0A1I9KFA9	Aeromonas_phage	57.3	1.5e-61
WP_005324004.1|3595122_3595320_+	DUF3283 family protein	NA	NA	NA	NA	NA
WP_171269988.1|3595334_3596309_+	DUF968 domain-containing protein	NA	R9TRM9	Vibrio_phage	34.5	3.1e-28
WP_171269711.1|3596295_3596682_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A0H5AUD2	Pseudomonas_phage	53.9	3.1e-24
WP_171269712.1|3596671_3597307_+	antitermination protein	NA	NA	NA	NA	NA
WP_171269713.1|3597545_3597869_+|holin	phage holin, lambda family	holin	A5X9I3	Aeromonas_virus	58.5	4.9e-23
WP_171269714.1|3597932_3598379_+	structural protein P5	NA	A0A0D4DAE2	Escherichia_phage	55.7	5.7e-38
WP_171269715.1|3598386_3598656_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269716.1|3598703_3598913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269717.1|3599087_3599294_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269718.1|3599368_3599734_+	HNH endonuclease	NA	A0A1P8DTD1	Proteus_phage	57.3	7.7e-33
WP_171269719.1|3600000_3600438_+|terminase	phage terminase small subunit P27 family	terminase	A0A2D1GNP3	Pseudomonas_phage	31.4	1.1e-06
WP_171269720.1|3600437_3602183_+|terminase	terminase large subunit	terminase	G3EN96	Psychrobacter_phage	52.9	2.9e-162
WP_171269721.1|3602175_3602364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269722.1|3602338_3603586_+|portal	phage portal protein	portal	A0A1J0GUY8	Halomonas_phage	52.2	2.7e-106
WP_171269723.1|3603575_3604172_+|head,protease	HK97 family phage prohead protease	head,protease	A0A1J0GUZ0	Halomonas_phage	56.7	5.8e-54
WP_171269724.1|3604234_3605440_+|capsid	phage major capsid protein	capsid	Q8SBH8	Shigella_phage	48.0	2.0e-98
3609644:3609658	attR	ACAGTGCCGAGGCCA	NA	NA	NA	NA
>prophage 11
NZ_CP038448	Aeromonas media strain R50-22 chromosome, complete genome	4748464	3608856	3621520	4748464		Aeromonas_phage(33.33%)	9	NA	NA
WP_171269732.1|3608856_3611157_+	hypothetical protein	NA	A0A2L0V160	Salmonella_phage	47.5	2.4e-23
WP_171269733.1|3611166_3611781_+	hypothetical protein	NA	Q7Y3Z8	Yersinia_phage	48.0	2.2e-48
WP_171269734.1|3611777_3612365_+	hypothetical protein	NA	S4TND4	Salmonella_phage	45.4	5.0e-42
WP_171269735.1|3612367_3612769_+	hypothetical protein	NA	A0A2I6PG15	Plesiomonas_phage	47.4	1.4e-27
WP_171277305.1|3612768_3617799_+	DUF1983 domain-containing protein	NA	Q7Y3Z3	Yersinia_phage	41.2	1.0e-10
WP_171269737.1|3617863_3619420_+	hypothetical protein	NA	A0A1I9KFH7	Aeromonas_phage	65.6	1.4e-192
WP_043162866.1|3619480_3619825_+	diversity-generating retroelement protein Avd	NA	A0A1I9KFC4	Aeromonas_phage	99.1	4.2e-57
WP_139751053.1|3620066_3620348_+	hypothetical protein	NA	A0A1I9KG33	Aeromonas_phage	94.6	4.3e-44
WP_171269738.1|3620803_3621520_-	metallophosphoesterase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	61.0	3.3e-80
>prophage 12
NZ_CP038448	Aeromonas media strain R50-22 chromosome, complete genome	4748464	3760293	3809365	4748464	transposase,integrase,protease	Escherichia_phage(22.22%)	38	3797508:3797526	3810435:3810453
WP_005324108.1|3760293_3761568_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.7	3.4e-128
WP_005324110.1|3761708_3764063_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	53.5	1.5e-225
WP_005315375.1|3764303_3764576_+	DNA-binding protein HU-beta	NA	A7KV42	Bacillus_phage	61.8	5.0e-21
WP_171269795.1|3764725_3766639_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_005324115.1|3766940_3768533_-	ABC-F family ATPase	NA	A0A2K9L0W2	Tupanvirus	27.6	1.4e-57
WP_042650381.1|3768744_3770400_-	cation acetate symporter	NA	NA	NA	NA	NA
WP_005324119.1|3770396_3770708_-	DUF485 domain-containing protein	NA	NA	NA	NA	NA
WP_043130766.1|3770815_3771442_-	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_171269796.1|3771444_3773232_-	cyclic nucleotide-binding/CBS domain-containing protein	NA	NA	NA	NA	NA
WP_005324126.1|3773390_3774197_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_041205868.1|3774271_3775771_-	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_043130760.1|3776075_3776507_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_043130757.1|3776526_3777336_+	zinc-dependent peptidase	NA	NA	NA	NA	NA
WP_005315399.1|3777414_3778011_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081934506.1|3778771_3781675_-	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_041206952.1|3781943_3782357_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_043130754.1|3782429_3783401_-	hydroxymethylglutaryl-CoA lyase	NA	A0A1V0SKU2	Klosneuvirus	35.7	1.8e-44
WP_043130753.1|3783397_3785359_-	methylcrotonoyl-CoA carboxylase	NA	NA	NA	NA	NA
WP_043130750.1|3785486_3786341_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_171269797.1|3788040_3789189_-	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_043130742.1|3789465_3790977_+	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_171269798.1|3791057_3792215_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_042650368.1|3792329_3793127_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_171269799.1|3793119_3794229_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_043130732.1|3794288_3795209_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_043130731.1|3795270_3796032_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	24.7	6.1e-08
WP_043130728.1|3796419_3797856_+	arginine-ornithine antiporter	NA	NA	NA	NA	NA
3797508:3797526	attL	CGCCACCTCGGCAGCCCTG	NA	NA	NA	NA
WP_043130725.1|3797948_3798737_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_043130722.1|3799033_3800194_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_171269800.1|3800322_3800652_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269801.1|3800727_3801720_-|transposase	IS5 family transposase	transposase	A0A077SK28	Escherichia_phage	81.4	1.8e-153
WP_171269802.1|3801987_3802389_+	abortive infection family protein	NA	NA	NA	NA	NA
WP_099368881.1|3802989_3804006_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.4	2.2e-186
WP_043133898.1|3804690_3805332_+	recombinase family protein	NA	NA	NA	NA	NA
WP_171269803.1|3805736_3806054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010676219.1|3806039_3807137_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_124245252.1|3807871_3808141_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012564931.1|3808417_3809365_+|transposase	IS30-like element ISAeca1 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	36.9	1.0e-44
3810435:3810453	attR	CAGGGCTGCCGAGGTGGCG	NA	NA	NA	NA
>prophage 13
NZ_CP038448	Aeromonas media strain R50-22 chromosome, complete genome	4748464	4212084	4264260	4748464	transposase,integrase	Cafeteria_roenbergensis_virus(16.67%)	38	4231660:4231675	4268054:4268069
WP_171268559.1|4212084_4213182_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_171268949.1|4213234_4214479_-	retention module-containing protein	NA	NA	NA	NA	NA
WP_042649774.1|4215218_4216661_+	ammonia-forming nitrite reductase cytochrome c552 subunit	NA	NA	NA	NA	NA
WP_171268948.1|4216712_4217366_+	cytochrome c nitrite reductase pentaheme subunit	NA	NA	NA	NA	NA
WP_171269847.1|4217362_4218040_+	cytochrome c nitrite reductase Fe-S protein	NA	NA	NA	NA	NA
WP_042649770.1|4218039_4218996_+	cytochrome c nitrite reductase subunit NrfD	NA	NA	NA	NA	NA
WP_171268947.1|4219145_4221107_+	heme lyase NrfEFG subunit NrfE	NA	NA	NA	NA	NA
WP_042649769.1|4221103_4221679_+	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA	NA
WP_171268946.1|4221675_4222860_+	heme lyase NrfEFG subunit NrfF	NA	NA	NA	NA	NA
WP_042649768.1|4222997_4223450_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_042649767.1|4223803_4224724_+	serine hydrolase	NA	NA	NA	NA	NA
WP_082030100.1|4224893_4225037_+	DUF2256 domain-containing protein	NA	NA	NA	NA	NA
WP_171268945.1|4225036_4226557_+	cryptochrome/photolyase family protein	NA	E3T4R9	Cafeteria_roenbergensis_virus	31.8	2.1e-47
WP_171268944.1|4226710_4227964_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_042649765.1|4228035_4228710_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_171268943.1|4228877_4230809_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_042649763.1|4230839_4231976_-	HPP family protein	NA	NA	NA	NA	NA
4231660:4231675	attL	GCGATGGCCAGCATCA	NA	NA	NA	NA
WP_171268941.1|4233404_4235684_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_042649680.1|4235845_4236781_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042649683.1|4236860_4237610_-	siderophore ferric iron reductase	NA	NA	NA	NA	NA
WP_171268940.1|4237702_4239847_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_171268939.1|4240115_4241027_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_043133101.1|4241268_4242009_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_171268938.1|4242071_4242974_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042648128.1|4243075_4243714_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_042648127.1|4244111_4245140_+	isopenicillin N synthase family oxygenase	NA	NA	NA	NA	NA
WP_042648126.1|4245265_4246429_+	PLP-dependent transferase	NA	NA	NA	NA	NA
WP_005326697.1|4246529_4247387_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	32.2	2.3e-27
WP_109422568.1|4248144_4249362_+	J domain-containing protein	NA	NA	NA	NA	NA
WP_099993964.1|4249865_4250882_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.4	2.2e-186
WP_171268937.1|4251462_4252410_+|transposase	IS30-like element ISAs2 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.7	1.8e-41
WP_042649575.1|4253066_4254017_-|transposase	IS1595-like element ISAeca5 family transposase	transposase	NA	NA	NA	NA
WP_171268936.1|4259111_4260280_-|transposase	IS3-like element ISAeme20 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	46.4	5.6e-69
WP_171268935.1|4260506_4260653_-	DUF4258 domain-containing protein	NA	NA	NA	NA	NA
WP_171268934.1|4260754_4261672_+	WYL domain-containing protein	NA	NA	NA	NA	NA
WP_010674967.1|4261735_4262017_-	hypothetical protein	NA	NA	NA	NA	NA
WP_104453295.1|4262141_4262894_-	HDOD domain-containing protein	NA	NA	NA	NA	NA
WP_010674969.1|4263015_4264260_-|integrase	site-specific integrase	integrase	A0A1W6JTA0	Pseudomonas_phage	29.1	4.9e-39
4268054:4268069	attR	GCGATGGCCAGCATCA	NA	NA	NA	NA
>prophage 14
NZ_CP038448	Aeromonas media strain R50-22 chromosome, complete genome	4748464	4535391	4667668	4748464	transposase,integrase,tRNA	Planktothrix_phage(12.5%)	112	4597054:4597071	4614080:4614097
WP_041205051.1|4535391_4536729_-|transposase	IS4-like element ISAeme15 family transposase	transposase	NA	NA	NA	NA
WP_042648938.1|4536860_4537622_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.0	2.6e-30
WP_042648939.1|4537618_4538293_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_042648940.1|4538330_4539104_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_012564931.1|4539150_4540098_-|transposase	IS30-like element ISAeca1 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	36.9	1.0e-44
WP_042648941.1|4540680_4541115_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042648942.1|4541157_4542198_-	peptidase M35	NA	NA	NA	NA	NA
WP_171268881.1|4542519_4543158_-	DUF2913 family protein	NA	NA	NA	NA	NA
WP_005328097.1|4543239_4544535_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	31.7	9.3e-49
WP_042648944.1|4544802_4545453_-	DedA family protein	NA	NA	NA	NA	NA
WP_042648945.1|4545800_4546766_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042648946.1|4546807_4547701_+	NERD domain-containing protein	NA	A0A2R2ZH57	Clostridioides_phage	29.3	1.3e-20
WP_171269463.1|4547760_4548867_-	DUF1615 domain-containing protein	NA	NA	NA	NA	NA
WP_005328087.1|4549153_4550242_+	sterol desaturase family protein	NA	NA	NA	NA	NA
WP_041205987.1|4550299_4551958_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_005328082.1|4552481_4555706_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_041205988.1|4555722_4556859_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	33.3	1.6e-49
WP_171269850.1|4557527_4558340_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_005328073.1|4558661_4560008_+	Na+/H+ antiporter NhaC family protein	NA	NA	NA	NA	NA
WP_005328071.1|4560242_4560839_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_005328069.1|4561010_4561664_+	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_042648947.1|4561917_4563150_+	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	49.1	3.1e-110
WP_171269462.1|4563255_4563579_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_005328062.1|4563776_4564841_+	3-deoxy-7-phosphoheptulonate synthase	NA	S4W5F1	Pandoravirus	49.0	1.7e-85
WP_005328061.1|4565048_4565834_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SE00	Indivirus	27.8	8.8e-10
WP_005328058.1|4565820_4566828_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA	NA
WP_041205990.1|4566913_4567645_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_005328056.1|4567757_4568114_+	DMT family protein	NA	NA	NA	NA	NA
WP_171277307.1|4568149_4569307_+	PilT/PilU family type 4a pilus ATPase	NA	NA	NA	NA	NA
WP_041205992.1|4569578_4570850_+	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA	NA
WP_005328051.1|4571009_4571252_-	FeoC-like transcriptional regulator	NA	NA	NA	NA	NA
WP_005328050.1|4571295_4573566_-	Fe(2+) transporter permease subunit FeoB	NA	NA	NA	NA	NA
WP_005328049.1|4573562_4573790_-	ferrous iron transport protein A	NA	NA	NA	NA	NA
WP_005328048.1|4573910_4574240_+	translation initiation factor	NA	NA	NA	NA	NA
WP_041205993.1|4574484_4575042_+	TMEM165/GDT1 family protein	NA	NA	NA	NA	NA
WP_041205994.1|4575242_4576181_+	DUF2157 domain-containing protein	NA	NA	NA	NA	NA
WP_005328044.1|4576277_4577285_+	DUF4401 domain-containing protein	NA	NA	NA	NA	NA
WP_042648949.1|4577391_4577889_+	GDYXXLXY domain-containing protein	NA	NA	NA	NA	NA
WP_042648952.1|4578083_4578836_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_081934473.1|4579112_4579367_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041205253.1|4579503_4580841_+|transposase	IS4-like element ISAeme15 family transposase	transposase	NA	NA	NA	NA
WP_042648671.1|4580913_4581201_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269852.1|4581713_4581938_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042649946.1|4581934_4583884_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052833539.1|4583911_4584316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099368881.1|4585137_4586154_+|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.4	2.2e-186
WP_042649750.1|4586835_4588212_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	25.6	1.3e-45
WP_005330899.1|4588402_4588900_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_005330897.1|4588889_4589603_+	DUF4269 domain-containing protein	NA	NA	NA	NA	NA
WP_005330895.1|4589599_4590328_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_042649749.1|4590448_4590697_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_042649748.1|4590903_4591527_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_158319064.1|4591867_4592497_-	Ig-like domain-containing protein	NA	NA	NA	NA	NA
WP_041206992.1|4592587_4593727_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SLN2	Escherichia_phage	68.2	6.1e-145
WP_041205574.1|4593784_4594210_+|transposase	IS200/IS605-like element ISAeme8 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	46.9	4.9e-23
WP_041206994.1|4595308_4596316_+	Fic family protein	NA	D7RWK9	Brochothrix_phage	24.2	3.4e-06
WP_012564931.1|4596876_4597824_-|transposase	IS30-like element ISAeca1 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	36.9	1.0e-44
4597054:4597071	attL	TCCCCGTTCCCATGCACT	NA	NA	NA	NA
WP_042648291.1|4598565_4599201_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088821966.1|4599267_4600355_-|transposase	IS3-like element ISAs22 family transposase	transposase	NA	NA	NA	NA
WP_025201450.1|4600539_4600842_-	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
WP_034523852.1|4600834_4601191_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021139619.1|4601338_4602544_-|integrase	site-specific integrase	integrase	Q19US1	Mannheimia_phage	34.6	6.5e-12
WP_042648290.1|4603386_4603941_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_042648289.1|4604234_4606088_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_042648288.1|4606200_4606845_-	UvrY/SirA/GacA family response regulator transcription factor	NA	NA	NA	NA	NA
WP_005331986.1|4607055_4607805_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_005331987.1|4607801_4608002_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_005331989.1|4608152_4609148_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_005331991.1|4609147_4610917_-	lipid A ABC transporter ATP-binding protein/permease MsbA	NA	W8CYL7	Bacillus_phage	30.5	4.2e-60
WP_042649661.1|4611120_4613376_-	DNA internalization-related competence protein ComEC/Rec2	NA	NA	NA	NA	NA
WP_042649660.1|4613404_4613923_+	DUF2062 domain-containing protein	NA	NA	NA	NA	NA
WP_042649659.1|4613916_4614411_+	DUF2062 domain-containing protein	NA	NA	NA	NA	NA
4614080:4614097	attR	TCCCCGTTCCCATGCACT	NA	NA	NA	NA
WP_042649658.1|4614537_4616043_+	DUF853 family protein	NA	A0A248XCZ8	Klebsiella_phage	46.6	1.9e-85
WP_005329100.1|4616199_4617390_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_042649657.1|4617535_4618477_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042649656.1|4618679_4619717_-	porin	NA	NA	NA	NA	NA
WP_119196704.1|4619988_4621257_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	33.7	2.3e-60
WP_119196703.1|4621261_4624519_-	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
WP_119196702.1|4624519_4625797_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_119196699.1|4625793_4627821_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
WP_171269854.1|4628223_4630296_+	ATP-dependent DNA helicase DinG	NA	A0A127AW80	Bacillus_phage	27.3	7.9e-42
WP_171269855.1|4630440_4631100_+	DUF2057 domain-containing protein	NA	NA	NA	NA	NA
WP_171269856.1|4631173_4632070_+	histone deacetylase	NA	A0A2K9KZC4	Tupanvirus	24.2	2.8e-12
WP_043128809.1|4632228_4633377_-	MFS transporter	NA	NA	NA	NA	NA
WP_042649651.1|4633617_4634568_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_139751181.1|4634894_4636286_+	alkaline phosphatase	NA	NA	NA	NA	NA
WP_042649649.1|4636309_4637677_+	alkaline phosphatase	NA	NA	NA	NA	NA
WP_042649648.1|4637727_4638411_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042649647.1|4638455_4639229_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_041206035.1|4639455_4639851_+	nucleoside diphosphate kinase regulator	NA	NA	NA	NA	NA
WP_005329071.1|4640067_4640658_+	transcriptional regulator UhpA	NA	NA	NA	NA	NA
WP_005329069.1|4640654_4642175_+	signal transduction histidine-protein kinase/phosphatase UhpB	NA	NA	NA	NA	NA
WP_041206036.1|4642196_4643531_+	MFS transporter	NA	NA	NA	NA	NA
WP_021141234.1|4644354_4645581_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	O80301	Enterobacteria_phage	78.6	7.7e-154
WP_021141233.1|4645638_4646043_+|transposase	IS200/IS605-like element ISAs26 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	54.8	8.8e-30
WP_042649645.1|4646946_4647735_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_005330345.1|4647832_4648792_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_041206038.1|4648881_4649625_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.7	3.0e-36
WP_041207009.1|4649825_4650665_+	sterol desaturase family protein	NA	NA	NA	NA	NA
WP_171269857.1|4650727_4652128_-	amino acid permease	NA	NA	NA	NA	NA
WP_041206039.1|4652137_4653037_-	homocysteine S-methyltransferase family protein	NA	NA	NA	NA	NA
WP_161507019.1|4653311_4653854_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041206040.1|4653874_4655194_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_025327511.1|4655386_4656097_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_005328825.1|4656187_4657006_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.1	3.6e-22
WP_042649945.1|4657112_4658762_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_041206042.1|4658779_4661017_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_081805723.1|4661221_4661761_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	NA	NA	NA	NA
WP_167332172.1|4662368_4662509_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005325257.1|4663212_4664820_+	malate synthase A	NA	NA	NA	NA	NA
WP_005325258.1|4664893_4666207_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_041205253.1|4666330_4667668_+|transposase	IS4-like element ISAeme15 family transposase	transposase	NA	NA	NA	NA
>prophage 1
NZ_CP038450	Aeromonas media strain R50-22 plasmid pAeme6, complete sequence	199818	5052	60839	199818	transposase	Stx2-converting_phage(40.0%)	53	NA	NA
WP_119196704.1|5052_6321_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	33.7	2.3e-60
WP_171277323.1|6761_8735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813959.1|9765_11327_-|transposase	IS3-like element ISAs20 family transposase	transposase	NA	NA	NA	NA
WP_171277346.1|11387_12884_+	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
WP_157669159.1|12888_13206_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088814002.1|13688_14060_+	hypothetical protein	NA	Q71TH9	Escherichia_phage	36.1	2.8e-06
WP_171277324.1|14141_15446_-|transposase	ISL3-like element ISSm4 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	31.8	2.1e-56
WP_171277325.1|15438_18687_-	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
WP_171277326.1|18683_20012_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_100229850.1|20008_21058_-	DUF1016 family protein	NA	Q9JMP5	Wolbachia_phage	33.1	4.0e-34
WP_100229849.1|21054_23085_-	SAM-dependent DNA methyltransferase	NA	A0A220A2U5	Liberibacter_phage	25.3	8.9e-22
WP_088813997.1|23990_24542_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813996.1|24653_25295_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_088813994.1|25501_26242_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157669158.1|26257_26563_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157669157.1|26791_27025_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813990.1|27079_27316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813987.1|27592_27811_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813986.1|27825_28086_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813983.1|28326_28566_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813981.1|28800_29370_-	restriction endonuclease	NA	NA	NA	NA	NA
WP_157669156.1|29482_29737_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813979.1|29748_30420_-	DUF4400 domain-containing protein	NA	NA	NA	NA	NA
WP_088813978.1|30419_32564_-	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA	NA
WP_157669155.1|32665_33202_-	integrating conjugative element protein	NA	NA	NA	NA	NA
WP_157669154.1|33216_33657_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_088813975.1|33821_34691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813974.1|34959_36330_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157669153.1|36326_36833_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813971.1|38195_39038_-	TIGR03761 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_157669151.1|39062_39653_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813969.1|40032_40872_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157669150.1|40924_42946_-	TraI domain-containing protein	NA	NA	NA	NA	NA
WP_157669149.1|42849_43398_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171277327.1|43652_45035_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171277328.1|45156_46707_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	80.8	1.7e-243
WP_171277329.1|46737_47085_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	90.4	3.2e-57
WP_171277330.1|47081_47483_-|transposase	transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	38.6	3.1e-11
WP_088813965.1|47994_48708_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157669147.1|48714_49623_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171277331.1|50107_50500_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171277332.1|50621_51182_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032432545.1|51433_54463_-|transposase	Tn3 family transposase	transposase	NA	NA	NA	NA
WP_010465829.1|54446_55049_-	recombinase family protein	NA	A0A0C4UR34	Shigella_phage	50.3	1.6e-40
WP_000182276.1|55240_55597_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_001172026.1|55598_55934_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_000741275.1|55948_56284_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000091614.1|56307_56634_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001054412.1|56630_57011_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171277333.1|57265_58381_+	HD-GYP domain-containing protein	NA	NA	NA	NA	NA
WP_088813953.1|58479_58782_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_041205730.1|58781_59147_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_171277334.1|59195_60839_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	31.7	6.9e-57
>prophage 2
NZ_CP038450	Aeromonas media strain R50-22 plasmid pAeme6, complete sequence	199818	70599	122742	199818	transposase,integrase	Salmonella_phage(22.22%)	41	93921:93935	129456:129470
WP_033991895.1|70599_73566_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	98.8	0.0e+00
WP_088813956.1|73542_75354_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017411289.1|75985_76618_-	tetracycline resistance transcriptional repressor TetR(E)	NA	NA	NA	NA	NA
WP_017411290.1|76698_77916_+	tetracycline efflux MFS transporter Tet(E)	NA	NA	NA	NA	NA
WP_011191339.1|78207_78777_-	recombinase family protein	NA	E5FFF9	Burkholderia_phage	51.6	1.4e-41
WP_001389365.1|79068_79833_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_000376623.1|80339_80840_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000259031.1|80967_81807_-	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
WP_000679427.1|81800_82148_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_001749986.1|82370_82823_-	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA	NA
WP_000186237.1|82907_83540_-	type B-3 chloramphenicol O-acetyltransferase CatB3	NA	A0A2R8FE91	Brazilian_cedratvirus	41.2	4.1e-26
WP_001334766.1|83677_84508_-	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA	NA
WP_063840321.1|84638_85193_-	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA	NA
WP_000845048.1|85484_86498_+|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
WP_001138014.1|87096_90063_+|transposase	Tn3-like element TnAs1 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	100.0	0.0e+00
WP_065285146.1|92644_94015_-|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
93921:93935	attL	TCGATGCTGCGCAGG	NA	NA	NA	NA
WP_088813950.1|94141_94699_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_065285147.1|94878_96042_+	MexC family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_088813949.1|96057_99192_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003152694.1|99196_100630_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_088813948.1|101074_102028_+	DUF4113 domain-containing protein	NA	F1C5A5	Cronobacter_phage	53.1	5.7e-88
WP_088813947.1|103140_103416_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157669145.1|103616_103823_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171277335.1|104660_105482_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813945.1|105700_106627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813944.1|107912_108185_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813943.1|108171_108402_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813942.1|108653_108830_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813941.1|109333_110020_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171277336.1|110119_110467_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171277337.1|110815_110968_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088813939.1|111236_111602_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157669143.1|112974_113859_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088814086.1|115084_115453_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088813938.1|115735_116071_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088813937.1|116951_117404_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157669142.1|117476_118595_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0K0N6I5	Gordonia_phage	32.8	1.5e-07
WP_088813935.1|118591_119707_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_088813934.1|120059_120485_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088813933.1|120617_121331_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001809438.1|121710_122742_+|transposase	IS630-like element ISAhy2 family transposase	transposase	NA	NA	NA	NA
129456:129470	attR	CCTGCGCAGCATCGA	NA	NA	NA	NA
