The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP038445	Aeromonas media strain R25-3 chromosome, complete genome	4683582	359427	399147	4683582	transposase,integrase	Acinetobacter_phage(25.0%)	36	374175:374190	389458:389473
WP_171269528.1|359427_360381_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_171269967.1|360463_361030_+	5'-nucleotidase	NA	NA	NA	NA	NA
WP_042648065.1|361424_361823_-	VOC family protein	NA	NA	NA	NA	NA
WP_171269324.1|361898_362843_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_042648580.1|362904_364146_-	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	36.5	8.1e-58
WP_005328794.1|364171_364510_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_042648579.1|364913_365915_+	diguanylate cyclase	NA	NA	NA	NA	NA
WP_005328788.1|366064_366478_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042648578.1|366540_368535_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	48.3	1.7e-28
WP_005328782.1|368756_369113_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041207099.1|369313_370036_+	response regulator	NA	W8CYM9	Bacillus_phage	36.7	3.1e-33
WP_042648577.1|370043_371429_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_025328559.1|371666_371879_-	RNA chaperone/antiterminator CspA	NA	A0A1W6JNX5	Morganella_phage	77.1	2.4e-23
WP_025328558.1|372272_372557_-	DUF3811 domain-containing protein	NA	NA	NA	NA	NA
WP_005328770.1|373068_373839_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
374175:374190	attL	TTTATTCTTACACTTT	NA	NA	NA	NA
WP_047440196.1|375382_375691_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_017780886.1|375789_376260_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017780887.1|376469_376661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017780888.1|376992_377628_-	tetracycline resistance transcriptional repressor TetR	NA	NA	NA	NA	NA
WP_017780889.1|377708_378926_+	tetracycline efflux MFS transporter Tet(E)	NA	NA	NA	NA	NA
WP_017780890.1|379013_379682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269529.1|380219_382382_-	AAA family ATPase	NA	A0A2I2L5Q3	Orpheovirus	26.2	1.8e-20
WP_085943968.1|382489_383657_+|transposase	IS3-like element ISAeme20 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	46.4	4.3e-69
WP_171269530.1|383678_384083_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049866848.1|384082_384562_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041207315.1|384549_386427_-|integrase	integrase	integrase	NA	NA	NA	NA
WP_171269322.1|386436_388005_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_049866859.1|388001_389357_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_171269968.1|389819_390767_+	DUF4113 domain-containing protein	NA	F1C5A5	Cronobacter_phage	48.4	1.0e-76
389458:389473	attR	TTTATTCTTACACTTT	NA	NA	NA	NA
WP_171269969.1|390875_391196_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_171269531.1|391283_391724_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017780887.1|391961_392153_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017780888.1|392484_393120_-	tetracycline resistance transcriptional repressor TetR	NA	NA	NA	NA	NA
WP_017780889.1|393199_394417_+	tetracycline efflux MFS transporter Tet(E)	NA	NA	NA	NA	NA
WP_017780890.1|394504_395173_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085943968.1|397979_399147_+|transposase	IS3-like element ISAeme20 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	46.4	4.3e-69
>prophage 2
NZ_CP038445	Aeromonas media strain R25-3 chromosome, complete genome	4683582	564822	623537	4683582	protease,tRNA,transposase,integrase	Diachasmimorpha_longicaudata_entomopoxvirus(12.5%)	59	594429:594442	623467:623480
WP_042649784.1|564822_565809_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_041206428.1|565945_566404_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA	NA
WP_005332255.1|566393_566855_+	chemotaxis protein CheX	NA	NA	NA	NA	NA
WP_005332257.1|566860_567088_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041207086.1|567176_568484_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
WP_042649785.1|568675_569386_-|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
WP_042649786.1|569514_570738_+	ATP-dependent RNA helicase SrmB	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	28.8	3.5e-45
WP_042649787.1|570923_571697_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_171269317.1|572864_573899_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA	NA
WP_171269316.1|573938_574640_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_171269315.1|574799_575627_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_025325667.1|575650_576202_+	YggT family protein	NA	NA	NA	NA	NA
WP_043128939.1|576201_576510_+	YggU family protein	NA	NA	NA	NA	NA
WP_041206420.1|576514_576934_+	DUF4426 domain-containing protein	NA	NA	NA	NA	NA
WP_171269314.1|577013_577844_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_005332293.1|578038_578335_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005332296.1|578385_578760_-	YacL family protein	NA	NA	NA	NA	NA
WP_171269313.1|579108_580224_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_025325674.1|580343_581606_+	GntP family permease	NA	NA	NA	NA	NA
WP_171269532.1|581615_582749_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	39.0	7.1e-45
WP_171269311.1|582951_583515_+	NnrU family protein	NA	NA	NA	NA	NA
WP_171269310.1|583574_584111_+	glutathione peroxidase	NA	NA	NA	NA	NA
WP_042649797.1|584193_585129_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_171269533.1|585311_586508_+	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA	NA
WP_171269308.1|587018_587513_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	51.9	3.7e-22
WP_171269307.1|587540_587957_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_005332325.1|588158_588497_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_005332327.1|588726_589737_+	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_171269306.1|589776_591402_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_139751234.1|591474_592509_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	32.1	3.7e-24
WP_005332333.1|592590_593496_+	Dyp-type peroxidase	NA	NA	NA	NA	NA
WP_005308670.1|593574_594045_-	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_171269305.1|594245_594986_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	34.3	3.3e-22
594429:594442	attL	GCCGACAGTGAATT	NA	NA	NA	NA
WP_005332335.1|595010_595748_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_005332336.1|595751_596402_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA	NA
WP_042649806.1|596404_597067_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA	NA
WP_041206414.1|597309_598245_+	malate dehydrogenase	NA	NA	NA	NA	NA
WP_171269507.1|598721_599270_+	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_171269304.1|599356_600550_-	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_041206413.1|600661_601129_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_041206412.1|601160_602441_-	DUF21 domain-containing protein	NA	NA	NA	NA	NA
WP_171269303.1|602481_603273_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_171269302.1|603559_604939_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_042649810.1|605118_605367_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_005332346.1|605391_605913_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_041206410.1|605947_606697_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_005313505.1|606729_607077_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_171269301.1|607182_607512_-	1,4-alpha-glucan branching protein	NA	NA	NA	NA	NA
WP_042649812.1|607595_608270_-	DNA mismatch repair endonuclease MutH	NA	NA	NA	NA	NA
WP_041206409.1|609004_609532_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_171269300.1|609545_611825_+	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	28.0	1.2e-11
WP_041207083.1|611892_612720_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_042649815.1|613369_614584_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_010674210.1|614785_616399_+|transposase	IS1634-like element ISAs25 family transposase	transposase	NA	NA	NA	NA
WP_171269299.1|616464_618780_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_021141270.1|618776_620792_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_021141269.1|620788_621271_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042650619.1|621267_622101_+	thymidylate synthase	NA	E5DV96	Deep-sea_thermophilic_phage	61.0	3.2e-95
WP_001310555.1|622520_623537_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.7	9.8e-187
623467:623480	attR	AATTCACTGTCGGC	NA	NA	NA	NA
>prophage 3
NZ_CP038445	Aeromonas media strain R25-3 chromosome, complete genome	4683582	1725041	1785228	4683582	transposase	Escherichia_phage(50.0%)	49	NA	NA
WP_171269628.1|1725041_1726007_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_042650017.1|1726070_1727114_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_005331601.1|1727515_1727833_+	heavy metal-binding domain-containing protein	NA	NA	NA	NA	NA
WP_171269629.1|1727993_1729004_+	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_171269630.1|1729349_1731611_-	LTA synthase family protein	NA	NA	NA	NA	NA
WP_042648302.1|1731861_1732956_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005327565.1|1733092_1734445_-	lysine-sensitive aspartokinase 3	NA	NA	NA	NA	NA
WP_148304685.1|1734509_1734689_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042648311.1|1734862_1736191_-	amino-acid N-acetyltransferase	NA	NA	NA	NA	NA
WP_005327561.1|1736443_1737076_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_042648312.1|1737342_1737678_-	DUF3802 family protein	NA	NA	NA	NA	NA
WP_171268989.1|1737689_1738226_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_042648304.1|1738231_1738603_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_171269631.1|1738711_1739521_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_171269632.1|1739559_1740465_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_171269633.1|1740600_1742298_+	L-lactate permease	NA	NA	NA	NA	NA
WP_171269979.1|1742311_1743088_+	(Fe-S)-binding protein	NA	NA	NA	NA	NA
WP_171269634.1|1743080_1744517_+	iron-sulfur cluster-binding protein	NA	NA	NA	NA	NA
WP_171269635.1|1744518_1745163_+	LUD domain-containing protein	NA	NA	NA	NA	NA
WP_171269636.1|1745162_1747955_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_171269637.1|1748084_1748948_-	class A beta-lactamase	NA	A0A077SL40	Escherichia_phage	41.3	1.5e-50
WP_171269638.1|1750510_1751050_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010674210.1|1751021_1752635_-|transposase	IS1634-like element ISAs25 family transposase	transposase	NA	NA	NA	NA
WP_171269639.1|1752706_1753249_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099368881.1|1753293_1754310_+|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.4	2.2e-186
WP_171269640.1|1754418_1755111_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269980.1|1755826_1756879_-	carotenoid 1,2-hydratase	NA	NA	NA	NA	NA
WP_171269641.1|1757064_1759485_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_171269642.1|1759506_1760187_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.0	1.5e-29
WP_171269643.1|1760339_1760813_+	DUF4357 domain-containing protein	NA	NA	NA	NA	NA
WP_171269644.1|1760938_1762366_+	sodium:proton antiporter NhaD	NA	NA	NA	NA	NA
WP_171269981.1|1762395_1762962_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_171269645.1|1763042_1764245_-	Bcr/CflA family multidrug efflux MFS transporter	NA	S4TR35	Salmonella_phage	25.4	1.2e-21
WP_171269646.1|1764361_1766008_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269647.1|1766095_1767358_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269982.1|1767464_1768037_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269648.1|1768149_1769571_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_171269649.1|1769650_1770475_-	FTR1 family protein	NA	NA	NA	NA	NA
WP_171269650.1|1770474_1773444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005327423.1|1773448_1773898_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269651.1|1774021_1774507_-	YqhA family protein	NA	NA	NA	NA	NA
WP_171269652.1|1774589_1775291_-	peptidase	NA	NA	NA	NA	NA
WP_171269653.1|1775307_1776108_-	transglutaminase family protein	NA	NA	NA	NA	NA
WP_005327429.1|1776104_1777031_-	alpha-E domain-containing protein	NA	NA	NA	NA	NA
WP_171269654.1|1777024_1778461_-	circularly permuted type 2 ATP-grasp protein	NA	NA	NA	NA	NA
WP_171269655.1|1778978_1779350_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269656.1|1779483_1781220_+	C4-dicarboxylic acid transporter DauA	NA	A0A2H4J153	uncultured_Caudovirales_phage	23.3	2.2e-29
WP_010676219.1|1782443_1783541_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_099368881.1|1784211_1785228_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.4	2.2e-186
>prophage 4
NZ_CP038445	Aeromonas media strain R25-3 chromosome, complete genome	4683582	1875730	1897497	4683582	holin,head,portal,terminase,capsid,protease,integrase	Aeromonas_phage(21.05%)	32	1868827:1868841	1901701:1901715
1868827:1868841	attL	ACAGTGCCGAGGCCA	NA	NA	NA	NA
WP_171269702.1|1875730_1876924_+|integrase	site-specific integrase	integrase	K7P7J2	Enterobacteria_phage	45.3	1.0e-86
WP_102948335.1|1876870_1877065_-	hypothetical protein	NA	NA	NA	NA	NA
WP_102948336.1|1877073_1877490_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269703.1|1879177_1879708_-	class I SAM-dependent methyltransferase	NA	A0A0N7IRF6	Acinetobacter_phage	59.9	4.5e-58
WP_171269704.1|1879704_1880049_-	DUF4406 domain-containing protein	NA	A0A1I9KFD3	Aeromonas_phage	64.8	3.2e-25
WP_171269705.1|1880239_1881448_-	hypothetical protein	NA	A0A291AUQ1	Sinorhizobium_phage	36.2	6.4e-68
WP_171269706.1|1881437_1882502_-	nucleoid-associated protein	NA	A0A291AUQ0	Sinorhizobium_phage	42.1	2.5e-63
WP_080944298.1|1882610_1883261_-	helix-turn-helix domain-containing protein	NA	A0A1I9KG86	Aeromonas_phage	48.7	3.5e-44
WP_045525005.1|1883348_1883534_+	hypothetical protein	NA	H9C161	Pectobacterium_phage	46.3	3.6e-07
WP_171269986.1|1883560_1884052_+	phage regulatory CII family protein	NA	NA	NA	NA	NA
WP_171269987.1|1884129_1884333_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269707.1|1884322_1884589_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269708.1|1884641_1885652_+	hypothetical protein	NA	A0A1I9KG10	Aeromonas_phage	45.7	5.2e-31
WP_171269709.1|1885629_1886115_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269710.1|1886114_1886396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_102948395.1|1886481_1887183_+	phage antirepressor KilAC domain-containing protein	NA	A0A1I9KFA9	Aeromonas_phage	57.3	1.5e-61
WP_005324004.1|1887179_1887377_+	DUF3283 family protein	NA	NA	NA	NA	NA
WP_171269988.1|1887391_1888366_+	DUF968 domain-containing protein	NA	R9TRM9	Vibrio_phage	34.5	3.1e-28
WP_171269711.1|1888352_1888739_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A0H5AUD2	Pseudomonas_phage	53.9	3.1e-24
WP_171269712.1|1888728_1889364_+	antitermination protein	NA	NA	NA	NA	NA
WP_171269713.1|1889602_1889926_+|holin	phage holin, lambda family	holin	A5X9I3	Aeromonas_virus	58.5	4.9e-23
WP_171269714.1|1889989_1890436_+	structural protein P5	NA	A0A0D4DAE2	Escherichia_phage	55.7	5.7e-38
WP_171269715.1|1890443_1890713_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269716.1|1890760_1890970_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269717.1|1891144_1891351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269718.1|1891425_1891791_+	HNH endonuclease	NA	A0A1P8DTD1	Proteus_phage	57.3	7.7e-33
WP_171269719.1|1892057_1892495_+|terminase	phage terminase small subunit P27 family	terminase	A0A2D1GNP3	Pseudomonas_phage	31.4	1.1e-06
WP_171269720.1|1892494_1894240_+|terminase	terminase large subunit	terminase	G3EN96	Psychrobacter_phage	52.9	2.9e-162
WP_171269721.1|1894232_1894421_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269722.1|1894395_1895643_+|portal	phage portal protein	portal	A0A1J0GUY8	Halomonas_phage	52.2	2.7e-106
WP_171269723.1|1895632_1896229_+|head,protease	HK97 family phage prohead protease	head,protease	A0A1J0GUZ0	Halomonas_phage	56.7	5.8e-54
WP_171269724.1|1896291_1897497_+|capsid	phage major capsid protein	capsid	Q8SBH8	Shigella_phage	48.0	2.0e-98
1901701:1901715	attR	ACAGTGCCGAGGCCA	NA	NA	NA	NA
>prophage 5
NZ_CP038445	Aeromonas media strain R25-3 chromosome, complete genome	4683582	1900913	1913577	4683582		Aeromonas_phage(33.33%)	9	NA	NA
WP_171269732.1|1900913_1903214_+	hypothetical protein	NA	A0A2L0V160	Salmonella_phage	47.5	2.4e-23
WP_171269733.1|1903223_1903838_+	hypothetical protein	NA	Q7Y3Z8	Yersinia_phage	48.0	2.2e-48
WP_171269734.1|1903834_1904422_+	hypothetical protein	NA	S4TND4	Salmonella_phage	45.4	5.0e-42
WP_171269735.1|1904424_1904826_+	hypothetical protein	NA	A0A2I6PG15	Plesiomonas_phage	47.4	1.4e-27
WP_171269736.1|1904909_1909856_+	DUF1983 domain-containing protein	NA	Q7Y3Z3	Yersinia_phage	41.2	1.0e-10
WP_171269737.1|1909920_1911477_+	hypothetical protein	NA	A0A1I9KFH7	Aeromonas_phage	65.6	1.4e-192
WP_043162866.1|1911537_1911882_+	diversity-generating retroelement protein Avd	NA	A0A1I9KFC4	Aeromonas_phage	99.1	4.2e-57
WP_139751053.1|1912123_1912405_+	hypothetical protein	NA	A0A1I9KG33	Aeromonas_phage	94.6	4.3e-44
WP_171269738.1|1912860_1913577_-	metallophosphoesterase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	61.0	3.3e-80
>prophage 6
NZ_CP038445	Aeromonas media strain R25-3 chromosome, complete genome	4683582	2052351	2101424	4683582	protease,transposase,integrase	Escherichia_phage(20.0%)	39	2089567:2089585	2102494:2102512
WP_005324108.1|2052351_2053626_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.7	3.4e-128
WP_005324110.1|2053766_2056121_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	53.5	1.5e-225
WP_005315375.1|2056361_2056634_+	DNA-binding protein HU-beta	NA	A7KV42	Bacillus_phage	61.8	5.0e-21
WP_171269795.1|2056783_2058697_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_005324115.1|2058998_2060591_-	ABC-F family ATPase	NA	A0A2K9L0W2	Tupanvirus	27.6	1.4e-57
WP_042650381.1|2060802_2062458_-	cation acetate symporter	NA	NA	NA	NA	NA
WP_005324119.1|2062454_2062766_-	DUF485 domain-containing protein	NA	NA	NA	NA	NA
WP_043130766.1|2062873_2063500_-	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_171269796.1|2063502_2065290_-	cyclic nucleotide-binding/CBS domain-containing protein	NA	NA	NA	NA	NA
WP_005324126.1|2065448_2066255_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_041205868.1|2066329_2067829_-	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_043130760.1|2068133_2068565_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_043130757.1|2068584_2069394_+	zinc-dependent peptidase	NA	NA	NA	NA	NA
WP_005315399.1|2069472_2070069_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081934506.1|2070829_2073733_-	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_041206952.1|2074001_2074415_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_043130754.1|2074487_2075459_-	hydroxymethylglutaryl-CoA lyase	NA	A0A1V0SKU2	Klosneuvirus	35.7	1.8e-44
WP_043130753.1|2075455_2077417_-	methylcrotonoyl-CoA carboxylase	NA	NA	NA	NA	NA
WP_043130750.1|2077544_2078399_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_043130747.1|2078409_2080044_-	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	46.0	5.7e-19
WP_171269797.1|2080099_2081248_-	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_043130742.1|2081524_2083036_+	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_171269798.1|2083116_2084274_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_042650368.1|2084388_2085186_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_171269799.1|2085178_2086288_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_043130732.1|2086347_2087268_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_043130731.1|2087329_2088091_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	24.7	6.1e-08
WP_043130728.1|2088478_2089915_+	arginine-ornithine antiporter	NA	NA	NA	NA	NA
2089567:2089585	attL	CGCCACCTCGGCAGCCCTG	NA	NA	NA	NA
WP_043130725.1|2090007_2090796_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_043130722.1|2091092_2092253_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_171269800.1|2092381_2092711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171269801.1|2092786_2093779_-|transposase	IS5 family transposase	transposase	A0A077SK28	Escherichia_phage	81.4	1.8e-153
WP_171269802.1|2094046_2094448_+	abortive infection family protein	NA	NA	NA	NA	NA
WP_099368881.1|2095048_2096065_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.4	2.2e-186
WP_043133898.1|2096749_2097391_+	recombinase family protein	NA	NA	NA	NA	NA
WP_171269803.1|2097795_2098113_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010676219.1|2098098_2099196_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_124245252.1|2099930_2100200_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012564931.1|2100476_2101424_+|transposase	IS30-like element ISAeca1 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	36.9	1.0e-44
2102494:2102512	attR	CAGGGCTGCCGAGGTGGCG	NA	NA	NA	NA
>prophage 7
NZ_CP038445	Aeromonas media strain R25-3 chromosome, complete genome	4683582	2199912	2211036	4683582	tRNA	Tupanvirus(16.67%)	8	NA	NA
WP_043131783.1|2199912_2201841_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	38.0	9.7e-127
WP_041204270.1|2201844_2202393_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	37.2	1.8e-14
WP_005315535.1|2202478_2202676_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010674800.1|2202690_2203047_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_005329694.1|2203371_2204355_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.2	5.3e-36
WP_171269819.1|2204367_2206755_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	A0A1L3IZU3	BeAn_58058_virus	24.5	1.1e-05
WP_005300715.1|2206758_2207055_+	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	35.6	3.0e-11
WP_043131919.1|2207109_2211036_+	transporter substrate-binding domain-containing protein	NA	A0A1V0SGX0	Hokovirus	35.6	4.1e-31
>prophage 8
NZ_CP038445	Aeromonas media strain R25-3 chromosome, complete genome	4683582	2487900	2540078	4683582	transposase,integrase	Cafeteria_roenbergensis_virus(16.67%)	39	2507476:2507491	2543872:2543887
WP_171268559.1|2487900_2488998_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_171268949.1|2489050_2490295_-	retention module-containing protein	NA	NA	NA	NA	NA
WP_042649774.1|2491034_2492477_+	ammonia-forming nitrite reductase cytochrome c552 subunit	NA	NA	NA	NA	NA
WP_171268948.1|2492528_2493182_+	cytochrome c nitrite reductase pentaheme subunit	NA	NA	NA	NA	NA
WP_171269847.1|2493178_2493856_+	cytochrome c nitrite reductase Fe-S protein	NA	NA	NA	NA	NA
WP_042649770.1|2493855_2494812_+	cytochrome c nitrite reductase subunit NrfD	NA	NA	NA	NA	NA
WP_171268947.1|2494961_2496923_+	heme lyase NrfEFG subunit NrfE	NA	NA	NA	NA	NA
WP_042649769.1|2496919_2497495_+	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA	NA
WP_171268946.1|2497491_2498676_+	heme lyase NrfEFG subunit NrfF	NA	NA	NA	NA	NA
WP_042649768.1|2498813_2499266_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_042649767.1|2499619_2500540_+	serine hydrolase	NA	NA	NA	NA	NA
WP_082030100.1|2500709_2500853_+	DUF2256 domain-containing protein	NA	NA	NA	NA	NA
WP_171268945.1|2500852_2502373_+	cryptochrome/photolyase family protein	NA	E3T4R9	Cafeteria_roenbergensis_virus	31.8	2.1e-47
WP_171268944.1|2502526_2503780_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_042649765.1|2503851_2504526_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_171268943.1|2504693_2506625_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_042649763.1|2506655_2507792_-	HPP family protein	NA	NA	NA	NA	NA
2507476:2507491	attL	GCGATGGCCAGCATCA	NA	NA	NA	NA
WP_171268942.1|2508002_2509121_+	glycosyltransferase family 9 protein	NA	NA	NA	NA	NA
WP_171268941.1|2509222_2511502_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_042649680.1|2511663_2512599_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042649683.1|2512678_2513428_-	siderophore ferric iron reductase	NA	NA	NA	NA	NA
WP_171268940.1|2513520_2515665_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_171268939.1|2515933_2516845_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_043133101.1|2517086_2517827_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_171268938.1|2517889_2518792_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042648128.1|2518893_2519532_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_042648127.1|2519929_2520958_+	isopenicillin N synthase family oxygenase	NA	NA	NA	NA	NA
WP_042648126.1|2521083_2522247_+	PLP-dependent transferase	NA	NA	NA	NA	NA
WP_005326697.1|2522347_2523205_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	32.2	2.3e-27
WP_109422568.1|2523962_2525180_+	J domain-containing protein	NA	NA	NA	NA	NA
WP_099993964.1|2525683_2526700_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.4	2.2e-186
WP_171268937.1|2527280_2528228_+|transposase	IS30-like element ISAs2 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.7	1.8e-41
WP_042649575.1|2528884_2529835_-|transposase	IS1595-like element ISAeca5 family transposase	transposase	NA	NA	NA	NA
WP_171268936.1|2534929_2536098_-|transposase	IS3-like element ISAeme20 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	46.4	5.6e-69
WP_171268935.1|2536324_2536471_-	DUF4258 domain-containing protein	NA	NA	NA	NA	NA
WP_171268934.1|2536572_2537490_+	WYL domain-containing protein	NA	NA	NA	NA	NA
WP_010674967.1|2537553_2537835_-	hypothetical protein	NA	NA	NA	NA	NA
WP_104453295.1|2537959_2538712_-	HDOD domain-containing protein	NA	NA	NA	NA	NA
WP_010674969.1|2538833_2540078_-|integrase	site-specific integrase	integrase	A0A1W6JTA0	Pseudomonas_phage	29.1	4.9e-39
2543872:2543887	attR	GCGATGGCCAGCATCA	NA	NA	NA	NA
>prophage 9
NZ_CP038445	Aeromonas media strain R25-3 chromosome, complete genome	4683582	2803089	2927246	4683582	tRNA,transposase,integrase	Planktothrix_phage(13.04%)	108	2864753:2864770	2881779:2881796
WP_041205051.1|2803089_2804427_-|transposase	IS4-like element ISAeme15 family transposase	transposase	NA	NA	NA	NA
WP_042648938.1|2804558_2805320_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.0	2.6e-30
WP_042648939.1|2805316_2805991_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_042648940.1|2806028_2806802_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_012564931.1|2806848_2807796_-|transposase	IS30-like element ISAeca1 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	36.9	1.0e-44
WP_042648941.1|2808378_2808813_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042648942.1|2808855_2809896_-	peptidase M35	NA	NA	NA	NA	NA
WP_171268881.1|2810217_2810856_-	DUF2913 family protein	NA	NA	NA	NA	NA
WP_005328097.1|2810937_2812233_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	31.7	9.3e-49
WP_042648944.1|2812500_2813151_-	DedA family protein	NA	NA	NA	NA	NA
WP_042648945.1|2813498_2814464_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042648946.1|2814505_2815399_+	NERD domain-containing protein	NA	A0A2R2ZH57	Clostridioides_phage	29.3	1.3e-20
WP_171269463.1|2815458_2816565_-	DUF1615 domain-containing protein	NA	NA	NA	NA	NA
WP_005328087.1|2816851_2817940_+	sterol desaturase family protein	NA	NA	NA	NA	NA
WP_041205987.1|2817997_2819656_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_005328082.1|2820179_2823404_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_041205988.1|2823420_2824557_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	33.3	1.6e-49
WP_171269850.1|2825225_2826038_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_005328073.1|2826359_2827706_+	Na+/H+ antiporter NhaC family protein	NA	NA	NA	NA	NA
WP_005328071.1|2827940_2828537_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_005328069.1|2828708_2829362_+	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_042648947.1|2829615_2830848_+	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	49.1	3.1e-110
WP_171269462.1|2830953_2831277_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_005328062.1|2831474_2832539_+	3-deoxy-7-phosphoheptulonate synthase	NA	S4W5F1	Pandoravirus	49.0	1.7e-85
WP_005328061.1|2832746_2833532_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SE00	Indivirus	27.8	8.8e-10
WP_005328058.1|2833518_2834526_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA	NA
WP_041205990.1|2834611_2835343_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_005328056.1|2835455_2835812_+	DMT family protein	NA	NA	NA	NA	NA
WP_171269851.1|2835866_2837006_+	PilT/PilU family type 4a pilus ATPase	NA	NA	NA	NA	NA
WP_041205992.1|2837277_2838549_+	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA	NA
WP_005328051.1|2838708_2838951_-	FeoC-like transcriptional regulator	NA	NA	NA	NA	NA
WP_005328050.1|2838994_2841265_-	Fe(2+) transporter permease subunit FeoB	NA	NA	NA	NA	NA
WP_005328049.1|2841261_2841489_-	ferrous iron transport protein A	NA	NA	NA	NA	NA
WP_005328048.1|2841609_2841939_+	translation initiation factor	NA	NA	NA	NA	NA
WP_041205993.1|2842183_2842741_+	TMEM165/GDT1 family protein	NA	NA	NA	NA	NA
WP_041205994.1|2842941_2843880_+	DUF2157 domain-containing protein	NA	NA	NA	NA	NA
WP_005328044.1|2843976_2844984_+	DUF4401 domain-containing protein	NA	NA	NA	NA	NA
WP_042648949.1|2845090_2845588_+	GDYXXLXY domain-containing protein	NA	NA	NA	NA	NA
WP_042648952.1|2845782_2846535_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_081934473.1|2846811_2847066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041205253.1|2847202_2848540_+|transposase	IS4-like element ISAeme15 family transposase	transposase	NA	NA	NA	NA
WP_042648671.1|2848612_2848900_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269852.1|2849412_2849637_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042649946.1|2849633_2851583_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052833539.1|2851610_2852015_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099368881.1|2852836_2853853_+|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.4	2.2e-186
WP_042649750.1|2854534_2855911_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	25.6	1.3e-45
WP_005330899.1|2856101_2856599_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_005330897.1|2856588_2857302_+	DUF4269 domain-containing protein	NA	NA	NA	NA	NA
WP_005330895.1|2857298_2858027_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_042649749.1|2858147_2858396_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_042649748.1|2858602_2859226_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_171269853.1|2859566_2860190_-	Ig-like domain-containing protein	NA	NA	NA	NA	NA
WP_041206992.1|2860286_2861426_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SLN2	Escherichia_phage	68.2	6.1e-145
WP_041205574.1|2861483_2861909_+|transposase	IS200/IS605-like element ISAeme8 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	46.9	4.9e-23
WP_041206994.1|2863007_2864015_+	Fic family protein	NA	D7RWK9	Brochothrix_phage	24.2	3.4e-06
WP_012564931.1|2864575_2865523_-|transposase	IS30-like element ISAeca1 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	36.9	1.0e-44
2864753:2864770	attL	TCCCCGTTCCCATGCACT	NA	NA	NA	NA
WP_042648291.1|2866264_2866900_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088821966.1|2866966_2868054_-|transposase	IS3-like element ISAs22 family transposase	transposase	NA	NA	NA	NA
WP_025201450.1|2868238_2868541_-	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
WP_034523852.1|2868533_2868890_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021139619.1|2869037_2870243_-|integrase	site-specific integrase	integrase	Q19US1	Mannheimia_phage	34.6	6.5e-12
WP_042648290.1|2871085_2871640_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_042648289.1|2871933_2873787_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_042648288.1|2873899_2874544_-	UvrY/SirA/GacA family response regulator transcription factor	NA	NA	NA	NA	NA
WP_005331986.1|2874754_2875504_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_005331987.1|2875500_2875701_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_005331989.1|2875851_2876847_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_005331991.1|2876846_2878616_-	lipid A ABC transporter ATP-binding protein/permease MsbA	NA	W8CYL7	Bacillus_phage	30.5	4.2e-60
WP_042649661.1|2878819_2881075_-	DNA internalization-related competence protein ComEC/Rec2	NA	NA	NA	NA	NA
WP_042649660.1|2881103_2881622_+	DUF2062 domain-containing protein	NA	NA	NA	NA	NA
WP_042649659.1|2881615_2882110_+	DUF2062 domain-containing protein	NA	NA	NA	NA	NA
2881779:2881796	attR	TCCCCGTTCCCATGCACT	NA	NA	NA	NA
WP_042649658.1|2882236_2883742_+	DUF853 family protein	NA	A0A248XCZ8	Klebsiella_phage	46.6	1.9e-85
WP_005329100.1|2883898_2885089_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_042649657.1|2885234_2886176_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042649656.1|2886378_2887416_-	porin	NA	NA	NA	NA	NA
WP_171269854.1|2887801_2889874_+	ATP-dependent DNA helicase DinG	NA	A0A127AW80	Bacillus_phage	27.3	7.9e-42
WP_171269855.1|2890018_2890678_+	DUF2057 domain-containing protein	NA	NA	NA	NA	NA
WP_171269856.1|2890751_2891648_+	histone deacetylase	NA	A0A2K9KZC4	Tupanvirus	24.2	2.8e-12
WP_043128809.1|2891806_2892955_-	MFS transporter	NA	NA	NA	NA	NA
WP_042649651.1|2893195_2894146_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_139751181.1|2894472_2895864_+	alkaline phosphatase	NA	NA	NA	NA	NA
WP_042649649.1|2895887_2897255_+	alkaline phosphatase	NA	NA	NA	NA	NA
WP_042649648.1|2897305_2897989_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042649647.1|2898033_2898807_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_041206035.1|2899033_2899429_+	nucleoside diphosphate kinase regulator	NA	NA	NA	NA	NA
WP_005329071.1|2899645_2900236_+	transcriptional regulator UhpA	NA	NA	NA	NA	NA
WP_005329069.1|2900232_2901753_+	signal transduction histidine-protein kinase/phosphatase UhpB	NA	NA	NA	NA	NA
WP_041206036.1|2901774_2903109_+	MFS transporter	NA	NA	NA	NA	NA
WP_021141234.1|2903932_2905159_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	O80301	Enterobacteria_phage	78.6	7.7e-154
WP_021141233.1|2905216_2905621_+|transposase	IS200/IS605-like element ISAs26 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	54.8	8.8e-30
WP_042649645.1|2906524_2907313_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_005330345.1|2907410_2908370_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_041206038.1|2908459_2909203_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.7	3.0e-36
WP_041207009.1|2909403_2910243_+	sterol desaturase family protein	NA	NA	NA	NA	NA
WP_171269857.1|2910305_2911706_-	amino acid permease	NA	NA	NA	NA	NA
WP_041206039.1|2911715_2912615_-	homocysteine S-methyltransferase family protein	NA	NA	NA	NA	NA
WP_161507019.1|2912889_2913432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041206040.1|2913452_2914772_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_025327511.1|2914964_2915675_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_005328825.1|2915765_2916584_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.1	3.6e-22
WP_042649945.1|2916690_2918340_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_041206042.1|2918357_2920595_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_081805723.1|2920799_2921339_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	NA	NA	NA	NA
WP_167332172.1|2921946_2922087_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005325257.1|2922790_2924398_+	malate synthase A	NA	NA	NA	NA	NA
WP_005325258.1|2924471_2925785_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_041205253.1|2925908_2927246_+|transposase	IS4-like element ISAeme15 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP038445	Aeromonas media strain R25-3 chromosome, complete genome	4683582	2995520	3109823	4683582	transposase	Escherichia_phage(22.22%)	101	NA	NA
WP_012564931.1|2995520_2996468_-|transposase	IS30-like element ISAeca1 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	36.9	1.0e-44
WP_171269884.1|2996677_2997724_-	EpsG family protein	NA	NA	NA	NA	NA
WP_171269997.1|2997734_2998790_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_171269885.1|2998827_2999922_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_171269998.1|2999918_3000875_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_171269886.1|3001456_3002707_-	O-antigen translocase	NA	NA	NA	NA	NA
WP_171269887.1|3002703_3003807_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	E5ES42	Bathycoccus_sp._RCC1105_virus	32.8	4.1e-45
WP_171269888.1|3003803_3004721_-	WxcM-like domain-containing protein	NA	NA	NA	NA	NA
WP_171269889.1|3004799_3005660_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.9	8.5e-107
WP_171269890.1|3005656_3006745_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	51.2	1.2e-97
WP_171269891.1|3006796_3007876_-	UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase	NA	NA	NA	NA	NA
WP_171269892.1|3008345_3010331_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	26.5	5.3e-19
WP_171269999.1|3010327_3011356_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_171269893.1|3011362_3012313_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
WP_171269894.1|3012312_3013125_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_052815422.1|3013133_3013853_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.6	5.2e-09
WP_171269895.1|3013856_3014600_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_171269896.1|3014603_3015527_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_080989948.1|3015546_3016587_-	acyltransferase	NA	NA	NA	NA	NA
WP_080989947.1|3016605_3017415_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_171269897.1|3017416_3019306_-	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_171269898.1|3019351_3019897_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	4.9e-52
WP_052815420.1|3019928_3020807_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.1	4.8e-105
WP_080989944.1|3020810_3021716_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_052815419.1|3021715_3022801_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	52.2	1.3e-96
WP_005342491.1|3023334_3024285_-|transposase	IS1595-like element ISKpn3 family transposase	transposase	NA	NA	NA	NA
WP_171269899.1|3024930_3025605_+	response regulator	NA	W8CYM9	Bacillus_phage	34.6	2.8e-28
WP_171269900.1|3025604_3026987_+	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_039041241.1|3027362_3028331_-	glucokinase	NA	NA	NA	NA	NA
WP_167332173.1|3028679_3029534_+	transcriptional regulator HexR	NA	NA	NA	NA	NA
WP_005324189.1|3029694_3031134_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_171269901.1|3031200_3032244_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_171269902.1|3032259_3035322_-	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	25.2	2.7e-70
WP_171269903.1|3035483_3037808_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_005324182.1|3037855_3038509_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_161506976.1|3038977_3039718_+	phosphatase	NA	NA	NA	NA	NA
WP_171270000.1|3040344_3041034_-	RNA ligase family protein	NA	A0A2H4UUE0	Bodo_saltans_virus	43.5	3.0e-06
WP_171269904.1|3041048_3041576_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269905.1|3041572_3042784_-	DUF3696 domain-containing protein	NA	NA	NA	NA	NA
WP_171269906.1|3043751_3044888_+|transposase	ISAs1-like element ISAs12 family transposase	transposase	NA	NA	NA	NA
WP_099992639.1|3045510_3046527_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.7	9.8e-187
WP_004576012.1|3047287_3048706_+|transposase	IS66-like element ISAs21 family transposase	transposase	NA	NA	NA	NA
WP_041205574.1|3048716_3049142_-|transposase	IS200/IS605-like element ISAeme8 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	46.9	4.9e-23
WP_041206863.1|3049199_3050339_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SLN2	Escherichia_phage	68.7	7.2e-146
WP_005328266.1|3050542_3050878_+	addiction module protein	NA	A0A141GEX6	Brucella_phage	46.4	2.0e-11
WP_041206074.1|3050883_3051198_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_005328262.1|3051763_3051916_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041206077.1|3052688_3053444_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	51.5	2.6e-59
WP_041206078.1|3053458_3055000_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	46.4	2.5e-125
WP_041206863.1|3055650_3056790_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SLN2	Escherichia_phage	68.7	7.2e-146
WP_099369027.1|3056908_3057925_+|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.1	4.9e-186
WP_171270001.1|3058046_3058472_+|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	46.9	3.8e-23
WP_041206080.1|3059035_3060451_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_041206081.1|3060443_3063593_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_041206082.1|3063610_3064804_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_005323466.1|3064956_3065598_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005323469.1|3065697_3066357_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_042649757.1|3066474_3067653_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
WP_005323471.1|3067727_3068591_-	acyl-CoA thioesterase II	NA	NA	NA	NA	NA
WP_005323472.1|3068846_3069770_-	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA	NA
WP_005323473.1|3069880_3070453_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	36.3	8.1e-21
WP_171269907.1|3070488_3071418_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_005323475.1|3071362_3071983_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005323476.1|3072112_3072994_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_139750965.1|3073415_3075053_+	anthranilate synthase component 1	NA	NA	NA	NA	NA
WP_005323478.1|3075045_3075645_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	36.8	1.2e-27
WP_042649753.1|3075654_3076668_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	38.7	5.8e-54
WP_171270002.1|3076727_3078152_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	NA	NA	NA	NA	NA
WP_005323481.1|3078206_3079400_+	tryptophan synthase subunit beta	NA	NA	NA	NA	NA
WP_171269908.1|3079396_3080203_+	tryptophan synthase subunit alpha	NA	NA	NA	NA	NA
WP_171270003.1|3080584_3081121_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010676219.1|3081108_3082206_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_171269909.1|3082268_3083336_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049832154.1|3083649_3083946_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005332142.1|3083929_3085246_+	HipA domain-containing protein	NA	NA	NA	NA	NA
WP_005332143.1|3085344_3085587_+	DUF3297 family protein	NA	NA	NA	NA	NA
WP_041205391.1|3085865_3086294_-	DMT family transporter	NA	NA	NA	NA	NA
WP_081805658.1|3086304_3086793_-	DMT family transporter	NA	NA	NA	NA	NA
WP_005332127.1|3086893_3087787_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_171269454.1|3087936_3089040_+	YdcF family protein	NA	NA	NA	NA	NA
WP_041205051.1|3089090_3090428_-|transposase	IS4-like element ISAeme15 family transposase	transposase	NA	NA	NA	NA
WP_043133720.1|3090635_3091004_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_042648130.1|3091061_3092423_-	MFS transporter	NA	NA	NA	NA	NA
WP_005327197.1|3092703_3093594_-	protoheme IX farnesyltransferase	NA	NA	NA	NA	NA
WP_005327195.1|3093607_3093937_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_005327189.1|3093936_3094548_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_041205386.1|3094552_3096529_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_081805657.1|3096532_3097606_-	cytochrome o ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_171269910.1|3098106_3098550_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_171269911.1|3098670_3099579_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005326902.1|3099682_3100012_-	DUF3634 family protein	NA	NA	NA	NA	NA
WP_171269912.1|3100114_3101083_-	nucleoside hydrolase	NA	NA	NA	NA	NA
WP_042648132.1|3101346_3101910_+	HutD family protein	NA	NA	NA	NA	NA
WP_048824562.1|3102011_3102467_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041205381.1|3102526_3102967_-	azurin	NA	NA	NA	NA	NA
WP_171268789.1|3103268_3104303_+	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_041205253.1|3104408_3105746_+|transposase	IS4-like element ISAeme15 family transposase	transposase	NA	NA	NA	NA
WP_041205380.1|3105787_3106213_-	Hsp20/alpha crystallin family protein	NA	A0A1B2LRT2	Wolbachia_phage	40.0	3.9e-12
WP_005326910.1|3106490_3108137_+	response regulator	NA	NA	NA	NA	NA
WP_041206863.1|3108200_3109340_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SLN2	Escherichia_phage	68.7	7.2e-146
WP_041205574.1|3109397_3109823_+|transposase	IS200/IS605-like element ISAeme8 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	46.9	4.9e-23
>prophage 11
NZ_CP038445	Aeromonas media strain R25-3 chromosome, complete genome	4683582	3293355	3340216	4683582	protease,tRNA,transposase	Bodo_saltans_virus(12.5%)	36	NA	NA
WP_041205257.1|3293355_3294363_-|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	29.4	7.8e-19
WP_171268702.1|3294584_3295340_+	YciK family oxidoreductase	NA	NA	NA	NA	NA
WP_005331279.1|3295427_3296312_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_171268701.1|3296380_3297553_-	MFS transporter	NA	NA	NA	NA	NA
WP_171268700.1|3297716_3298859_+	putative C-S lyase	NA	NA	NA	NA	NA
WP_171268699.1|3299210_3300533_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_163147847.1|3300611_3301520_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_025326213.1|3301690_3302947_+	adenylosuccinate synthetase	NA	A0A2R8FF47	Brazilian_cedratvirus	31.5	6.5e-47
WP_171268698.1|3303216_3303753_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_171268697.1|3303764_3304568_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_171268696.1|3304752_3307233_+	alpha-glucosidase	NA	NA	NA	NA	NA
WP_171269936.1|3307307_3308507_-|tRNA	tyrosine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_171268694.1|3308621_3309941_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A1P8BKT8	Lactococcus_phage	48.7	1.0e-18
WP_171268693.1|3309997_3311122_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA	NA
WP_171268692.1|3311213_3311495_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010676219.1|3312037_3313135_+|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_005327996.1|3314985_3316404_-|transposase	IS66-like element ISUnCu16 family transposase	transposase	NA	NA	NA	NA
WP_171269447.1|3317589_3317865_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171268691.1|3318364_3320356_-	transketolase	NA	NA	NA	NA	NA
WP_025326202.1|3320697_3321849_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	62.6	4.7e-129
WP_171268690.1|3321917_3322457_+|protease	SprT family zinc-dependent metalloprotease	protease	A0A060AI19	Cronobacter_phage	28.0	5.9e-05
WP_171268689.1|3322530_3323229_+	endonuclease	NA	NA	NA	NA	NA
WP_171268688.1|3323298_3324030_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_163136244.1|3324081_3325032_+	glutathione synthase	NA	NA	NA	NA	NA
WP_171268687.1|3325227_3325782_+	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_025326196.1|3326102_3326525_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_171269446.1|3326552_3327566_-	HTH-type transcriptional regulator YidZ	NA	NA	NA	NA	NA
WP_171268686.1|3327584_3328757_-	MFS transporter	NA	NA	NA	NA	NA
WP_041205051.1|3329175_3330513_-|transposase	IS4-like element ISAeme15 family transposase	transposase	NA	NA	NA	NA
WP_041205244.1|3331865_3333305_-	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_041206846.1|3334049_3335000_+	transaldolase	NA	A0A127KNC6	Cyanophage	30.7	2.7e-13
WP_025326190.1|3335193_3335373_+	DUF3545 family protein	NA	NA	NA	NA	NA
WP_041205240.1|3335469_3336018_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_171268685.1|3336202_3336889_-	uracil-DNA glycosylase	NA	A0A0A7D9F8	Equid_alphaherpesvirus	49.3	4.3e-53
WP_005330139.1|3337480_3337861_+	autonomous glycyl radical cofactor GrcA	NA	A0A219YAN3	Aeromonas_phage	59.5	2.8e-30
WP_042650017.1|3339172_3340216_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP038445	Aeromonas media strain R25-3 chromosome, complete genome	4683582	3688603	3816989	4683582	tRNA,transposase,integrase	Bacillus_phage(18.75%)	97	3756306:3756322	3821342:3821358
WP_005342491.1|3688603_3689554_+|transposase	IS1595-like element ISKpn3 family transposase	transposase	NA	NA	NA	NA
WP_099368923.1|3690625_3691642_+|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.4	3.7e-186
WP_042648917.1|3692714_3693320_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_042648916.1|3693465_3694056_+	MliC family protein	NA	NA	NA	NA	NA
WP_042648915.1|3694117_3695626_-	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_042648914.1|3695900_3696827_-	L,D-transpeptidase family protein	NA	NA	NA	NA	NA
WP_042648913.1|3697006_3698248_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_042648912.1|3698381_3699581_-	acetate kinase	NA	NA	NA	NA	NA
WP_042648911.1|3700100_3700571_-	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA	NA
WP_025325894.1|3700871_3701978_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_042648919.1|3702197_3702749_-	ribosomal protein S5-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_025325892.1|3702810_3703371_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_042648910.1|3703719_3705489_+	M4 family metallopeptidase	NA	NA	NA	NA	NA
WP_042648909.1|3705535_3706435_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042648908.1|3706643_3707837_+	multidrug efflux MFS transporter MdtH	NA	NA	NA	NA	NA
WP_171269941.1|3708039_3724293_-	Ig-like domain-containing protein	NA	NA	NA	NA	NA
WP_042649094.1|3724516_3726178_-	putative transporter	NA	NA	NA	NA	NA
WP_042649093.1|3726295_3726931_-	hemolysin III family protein	NA	NA	NA	NA	NA
WP_042649092.1|3727165_3728698_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_042649091.1|3728834_3729386_+	septation protein A	NA	NA	NA	NA	NA
WP_025325883.1|3729410_3729707_+	YciI family protein	NA	NA	NA	NA	NA
WP_042649090.1|3729796_3730552_-	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA	NA
WP_042649089.1|3730717_3731038_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_042649088.1|3731131_3732043_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	45.9	2.0e-61
WP_042649087.1|3732256_3733654_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	38.8	1.4e-79
WP_042649086.1|3733726_3734698_-	response regulator	NA	NA	NA	NA	NA
WP_042649095.1|3735010_3735685_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042649085.1|3735751_3736606_+	ATP-binding protein	NA	A0A1B1P8D0	Bacillus_phage	28.4	4.8e-09
WP_042649084.1|3736733_3737369_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_042649083.1|3737447_3738647_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_042649082.1|3738643_3739786_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_041206813.1|3739785_3740763_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_005327981.1|3740863_3742222_-	TolC family protein	NA	NA	NA	NA	NA
WP_042649081.1|3742562_3743528_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_005309538.1|3743553_3743850_+	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA	NA
WP_042649080.1|3744407_3745832_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042649079.1|3746030_3747227_-	J domain-containing protein	NA	NA	NA	NA	NA
WP_042649078.1|3747385_3748036_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196733.1|3748019_3749351_-	AAA family ATPase	NA	C7BGE8	Burkholderia_phage	30.6	8.2e-08
WP_171269942.1|3749638_3749854_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171268592.1|3750130_3750886_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	50.6	2.2e-58
WP_158196731.1|3750900_3752442_-|transposase	IS21-like element ISAs29 family transposase	transposase	K4I413	Acidithiobacillus_phage	47.4	1.3e-129
WP_158196730.1|3752618_3752846_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196729.1|3752832_3754341_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_158196728.1|3754594_3755344_+|transposase	IS5 family transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	36.9	7.3e-14
WP_171269943.1|3755375_3760646_-	PAS domain S-box protein	NA	A0A1V0SGX0	Hokovirus	31.1	6.0e-62
3756306:3756322	attL	CAGGCCATCCTCGGCCA	NA	NA	NA	NA
WP_171269944.1|3760768_3763237_-	EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	30.7	3.7e-14
WP_171269945.1|3763624_3764686_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_042650017.1|3765657_3766701_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_021141311.1|3768126_3769263_-|transposase	ISAs1-like element ISAs12 family transposase	transposase	NA	NA	NA	NA
WP_171269946.1|3770021_3770195_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171268589.1|3770232_3772197_+	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	35.6	3.6e-20
WP_158196722.1|3772916_3774345_+|transposase	IS66-like element ISAeme23 family transposase	transposase	NA	NA	NA	NA
WP_042054148.1|3774544_3774880_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA	NA
WP_158196721.1|3774954_3775269_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196720.1|3775358_3775655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196719.1|3775687_3776029_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029303521.1|3776030_3776573_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196718.1|3776652_3777015_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196717.1|3777011_3777227_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196716.1|3777223_3777733_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158198333.1|3777849_3778098_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196715.1|3778212_3778404_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196714.1|3778400_3778898_-	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_158196713.1|3779265_3779694_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171269439.1|3779704_3780130_-	DUF2787 family protein	NA	NA	NA	NA	NA
WP_158196711.1|3780165_3780729_-	lecithin retinol acyltransferase family protein	NA	NA	NA	NA	NA
WP_158196710.1|3780816_3781491_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042034774.1|3781502_3781655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158196709.1|3781666_3782020_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024945142.1|3782301_3782646_+	helix-turn-helix transcriptional regulator	NA	A0A2H4J5G9	uncultured_Caudovirales_phage	34.3	1.5e-06
WP_171269947.1|3782792_3783767_-	inovirus-type Gp2 protein	NA	NA	NA	NA	NA
WP_021137981.1|3784184_3784397_-	AlpA family transcriptional regulator	NA	A0A1V0E8E5	Vibrio_phage	35.9	1.8e-05
WP_158196706.1|3784783_3785833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010674210.1|3785964_3787578_-|transposase	IS1634-like element ISAs25 family transposase	transposase	NA	NA	NA	NA
WP_171270005.1|3787694_3788048_+	H-NS histone family protein	NA	NA	NA	NA	NA
WP_158196703.1|3789103_3790321_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	49.9	1.6e-103
WP_042649676.1|3790567_3791200_-	LysE family translocator	NA	NA	NA	NA	NA
WP_025328177.1|3797264_3797615_-	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	49.5	6.7e-26
WP_042649482.1|3797704_3798397_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042649481.1|3798484_3799879_-	H(+)/Cl(-) exchange transporter ClcA	NA	NA	NA	NA	NA
WP_042649480.1|3800101_3801388_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_042649483.1|3801598_3802423_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042649479.1|3802461_3803382_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_042649478.1|3803628_3804345_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_042649477.1|3804554_3805070_+	DUF2937 family protein	NA	NA	NA	NA	NA
WP_042649476.1|3805133_3806015_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042649475.1|3806173_3806566_+	multidrug transporter	NA	NA	NA	NA	NA
WP_042649474.1|3806553_3806874_+	ligand-binding protein SH3	NA	NA	NA	NA	NA
WP_041205253.1|3806973_3808311_-|transposase	IS4-like element ISAeme15 family transposase	transposase	NA	NA	NA	NA
WP_042650422.1|3808396_3808807_-	VOC family protein	NA	NA	NA	NA	NA
WP_005327576.1|3808849_3811171_-	penicillin-binding protein 1B	NA	NA	NA	NA	NA
WP_042650421.1|3811435_3813883_-	ATP-dependent helicase HrpB	NA	A0A0G2Y9F4	Acanthamoeba_polyphaga_mimivirus	27.8	2.9e-27
WP_005327573.1|3814119_3814665_+	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA	NA
WP_005327571.1|3814661_3815399_+	DNA/RNA nuclease SfsA	NA	NA	NA	NA	NA
WP_005329052.1|3815524_3815974_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_041206812.1|3816086_3816989_+|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	tRNA	NA	NA	NA	NA
3821342:3821358	attR	TGGCCGAGGATGGCCTG	NA	NA	NA	NA
>prophage 13
NZ_CP038445	Aeromonas media strain R25-3 chromosome, complete genome	4683582	3861834	3875675	4683582	tRNA,transposase	Acidithiobacillus_phage(20.0%)	12	NA	NA
WP_042061740.1|3861834_3863397_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	46.2	8.2e-124
WP_024945936.1|3863422_3864178_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	45.4	6.9e-52
WP_081805626.1|3865699_3867565_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	32.6	1.1e-34
WP_005331907.1|3867778_3869566_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.4	4.0e-74
WP_005331908.1|3869654_3870098_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	48.6	2.0e-27
WP_005309452.1|3870113_3870329_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_005331910.1|3870508_3871522_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.6	3.1e-108
WP_005331913.1|3871609_3872593_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	33.7	4.9e-34
WP_041205045.1|3872639_3873704_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0A7NU10	Lactobacillus_phage	36.2	4.9e-11
WP_041205044.1|3873713_3874295_-	DedA family protein	NA	NA	NA	NA	NA
WP_005332743.1|3874291_3874909_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.4	2.4e-34
WP_042648740.1|3874913_3875675_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	53.4	3.3e-70
>prophage 14
NZ_CP038445	Aeromonas media strain R25-3 chromosome, complete genome	4683582	4300925	4341175	4683582	transposase	Bacillus_phage(66.67%)	44	NA	NA
WP_021141311.1|4300925_4302062_+|transposase	ISAs1-like element ISAs12 family transposase	transposase	NA	NA	NA	NA
WP_042650017.1|4302672_4303716_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_005307999.1|4310599_4310983_-	50S ribosomal protein L17	NA	NA	NA	NA	NA
WP_005307997.1|4311026_4312016_-	DNA-directed RNA polymerase subunit alpha	NA	NA	NA	NA	NA
WP_010672568.1|4312041_4312662_-	30S ribosomal protein S4	NA	NA	NA	NA	NA
WP_005319702.1|4312701_4313091_-	30S ribosomal protein S11	NA	NA	NA	NA	NA
WP_005307991.1|4313105_4313462_-	30S ribosomal protein S13	NA	NA	NA	NA	NA
WP_005319705.1|4313601_4313715_-	50S ribosomal protein L36	NA	NA	NA	NA	NA
WP_005307989.1|4313742_4315071_-	preprotein translocase subunit SecY	NA	NA	NA	NA	NA
WP_025325390.1|4315079_4315517_-	50S ribosomal protein L15	NA	NA	NA	NA	NA
WP_005307985.1|4315519_4315699_-	50S ribosomal protein L30	NA	NA	NA	NA	NA
WP_005340605.1|4315705_4316206_-	30S ribosomal protein S5	NA	NA	NA	NA	NA
WP_033130012.1|4316220_4316574_-	50S ribosomal protein L18	NA	NA	NA	NA	NA
WP_025325388.1|4316583_4317117_-	50S ribosomal protein L6	NA	NA	NA	NA	NA
WP_042648861.1|4317130_4317523_-	30S ribosomal protein S8	NA	NA	NA	NA	NA
WP_005331161.1|4317542_4317848_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_005331162.1|4317858_4318398_-	50S ribosomal protein L5	NA	NA	NA	NA	NA
WP_025325387.1|4318411_4318729_-	50S ribosomal protein L24	NA	NA	NA	NA	NA
WP_005307975.1|4318740_4319109_-	50S ribosomal protein L14	NA	NA	NA	NA	NA
WP_005307966.1|4319257_4319506_-	30S ribosomal protein S17	NA	NA	NA	NA	NA
WP_005307965.1|4319505_4319697_-	50S ribosomal protein L29	NA	NA	NA	NA	NA
WP_005307963.1|4319696_4320110_-	50S ribosomal protein L16	NA	NA	NA	NA	NA
WP_005331168.1|4320123_4320837_-	30S ribosomal protein S3	NA	NA	NA	NA	NA
WP_005319741.1|4320840_4321185_-	50S ribosomal protein L22	NA	NA	NA	NA	NA
WP_005307960.1|4321195_4321474_-	30S ribosomal protein S19	NA	NA	NA	NA	NA
WP_005331177.1|4321496_4322318_-	50S ribosomal protein L2	NA	NA	NA	NA	NA
WP_005331199.1|4322333_4322636_-	50S ribosomal protein L23	NA	NA	NA	NA	NA
WP_025325386.1|4322632_4323238_-	50S ribosomal protein L4	NA	NA	NA	NA	NA
WP_025325385.1|4323255_4323888_-	50S ribosomal protein L3	NA	NA	NA	NA	NA
WP_005307944.1|4323910_4324222_-	30S ribosomal protein S10	NA	NA	NA	NA	NA
WP_042648862.1|4324578_4325493_+	DMT family transporter	NA	NA	NA	NA	NA
WP_042648863.1|4325530_4326841_-	two-component system sensor histidine kinase EnvZ	NA	W8CYF6	Bacillus_phage	23.1	1.2e-11
WP_005328510.1|4326837_4327557_-	two-component system response regulator OmpR	NA	W8CYM9	Bacillus_phage	34.2	5.7e-32
WP_161646994.1|4328056_4329334_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004576012.1|4329798_4331217_-|transposase	IS66-like element ISAs21 family transposase	transposase	NA	NA	NA	NA
WP_171269951.1|4331272_4332058_+	hypothetical protein	NA	NA	NA	NA	NA
WP_161646995.1|4332245_4333139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171270006.1|4334093_4335128_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	31.5	8.0e-27
WP_171269952.1|4335124_4336399_-|transposase	IS4-like element ISApu2 family transposase	transposase	NA	NA	NA	NA
WP_004099020.1|4336555_4336927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011191342.1|4337244_4338513_+|transposase	IS4-like element ISApu1 family transposase	transposase	NA	NA	NA	NA
WP_171269953.1|4338890_4339499_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_171269954.1|4339583_4339799_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021141311.1|4340038_4341175_-|transposase	ISAs1-like element ISAs12 family transposase	transposase	NA	NA	NA	NA
