assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013003965.1_ASM1300396v1	NZ_CP053069	Nitrosomonadales bacterium 0125_3 chromosome, complete genome	1	2529679-2529777	1	CRISPRCasFinder	no		cas3,WYL,csa3,Cas9_archaeal,DinG,DEDDh	Orphan	AAGCTGGCGGAAACGAAACGCGC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,Cas9_archaeal,DinG,DEDDh	NA|359aa|up_8|NZ_CP053069.1_2519210_2520287_-,NA|325aa|up_0|NZ_CP053069.1_2528027_2529002_-,NA|114aa|down_1|NZ_CP053069.1_2531955_2532297_-	NA|1298aa|up_9|NZ_CP053069.1_2515320_2519214_+	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein	NA|359aa|up_8|NZ_CP053069.1_2519210_2520287_-	NA	NA|260aa|up_7|NZ_CP053069.1_2520296_2521076_-	cd13623, PBP2_AA_hypothetical, Substrate-binding domain of putative amino-acid transport system; the type 2 periplasmic binding protein fold	NA|216aa|up_6|NZ_CP053069.1_2521072_2521720_-	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif	NA|170aa|up_5|NZ_CP053069.1_2521720_2522230_-	PRK14054, PRK14054, peptide-methionine (S)-S-oxide reductase	NA|350aa|up_4|NZ_CP053069.1_2522251_2523301_-	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|502aa|up_3|NZ_CP053069.1_2523363_2524869_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|434aa|up_2|NZ_CP053069.1_2524904_2526206_-	PRK06133, PRK06133, glutamate carboxypeptidase; Reviewed	NA|569aa|up_1|NZ_CP053069.1_2526298_2528005_+	COG3391, COG3391, Uncharacterized conserved protein [Function unknown]	NA|325aa|up_0|NZ_CP053069.1_2528027_2529002_-	NA	NA|407aa|down_0|NZ_CP053069.1_2530656_2531877_-	pfam06441, EHN, Epoxide hydrolase N-terminus	NA|114aa|down_1|NZ_CP053069.1_2531955_2532297_-	NA	NA|210aa|down_2|NZ_CP053069.1_2532434_2533064_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|1015aa|down_3|NZ_CP053069.1_2533060_2536105_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|169aa|down_4|NZ_CP053069.1_2536257_2536764_-	PRK14054, PRK14054, peptide-methionine (S)-S-oxide reductase	NA|156aa|down_5|NZ_CP053069.1_2536756_2537224_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|364aa|down_6|NZ_CP053069.1_2537239_2538331_-	cd03012, TlpA_like_DipZ_like, TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain	NA|392aa|down_7|NZ_CP053069.1_2538347_2539523_-	pfam06441, EHN, Epoxide hydrolase N-terminus	NA|441aa|down_8|NZ_CP053069.1_2539607_2540930_-	pfam06441, EHN, Epoxide hydrolase N-terminus	NA|1840aa|down_9|NZ_CP053069.1_2541120_2546640_-	COG3899, COG3899, Predicted ATPase [General function prediction only]
GCF_013003965.1_ASM1300396v1	NZ_CP053069	Nitrosomonadales bacterium 0125_3 chromosome, complete genome	2	2530087-2530349	2	CRISPRCasFinder	no		cas3,WYL,csa3,Cas9_archaeal,DinG,DEDDh	Orphan	AAGCTGGCGGAAACGAAACGCGC	23	0	0	NA	NA	NA	5	5	Orphan	cas3,WYL,csa3,Cas9_archaeal,DinG,DEDDh	NA|359aa|up_8|NZ_CP053069.1_2519210_2520287_-,NA|325aa|up_0|NZ_CP053069.1_2528027_2529002_-,NA|114aa|down_1|NZ_CP053069.1_2531955_2532297_-	NA|1298aa|up_9|NZ_CP053069.1_2515320_2519214_+	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein	NA|359aa|up_8|NZ_CP053069.1_2519210_2520287_-	NA	NA|260aa|up_7|NZ_CP053069.1_2520296_2521076_-	cd13623, PBP2_AA_hypothetical, Substrate-binding domain of putative amino-acid transport system; the type 2 periplasmic binding protein fold	NA|216aa|up_6|NZ_CP053069.1_2521072_2521720_-	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif	NA|170aa|up_5|NZ_CP053069.1_2521720_2522230_-	PRK14054, PRK14054, peptide-methionine (S)-S-oxide reductase	NA|350aa|up_4|NZ_CP053069.1_2522251_2523301_-	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|502aa|up_3|NZ_CP053069.1_2523363_2524869_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|434aa|up_2|NZ_CP053069.1_2524904_2526206_-	PRK06133, PRK06133, glutamate carboxypeptidase; Reviewed	NA|569aa|up_1|NZ_CP053069.1_2526298_2528005_+	COG3391, COG3391, Uncharacterized conserved protein [Function unknown]	NA|325aa|up_0|NZ_CP053069.1_2528027_2529002_-	NA	NA|407aa|down_0|NZ_CP053069.1_2530656_2531877_-	pfam06441, EHN, Epoxide hydrolase N-terminus	NA|114aa|down_1|NZ_CP053069.1_2531955_2532297_-	NA	NA|210aa|down_2|NZ_CP053069.1_2532434_2533064_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|1015aa|down_3|NZ_CP053069.1_2533060_2536105_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|169aa|down_4|NZ_CP053069.1_2536257_2536764_-	PRK14054, PRK14054, peptide-methionine (S)-S-oxide reductase	NA|156aa|down_5|NZ_CP053069.1_2536756_2537224_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|364aa|down_6|NZ_CP053069.1_2537239_2538331_-	cd03012, TlpA_like_DipZ_like, TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain	NA|392aa|down_7|NZ_CP053069.1_2538347_2539523_-	pfam06441, EHN, Epoxide hydrolase N-terminus	NA|441aa|down_8|NZ_CP053069.1_2539607_2540930_-	pfam06441, EHN, Epoxide hydrolase N-terminus	NA|1840aa|down_9|NZ_CP053069.1_2541120_2546640_-	COG3899, COG3899, Predicted ATPase [General function prediction only]
GCF_013003965.1_ASM1300396v1	NZ_CP053069	Nitrosomonadales bacterium 0125_3 chromosome, complete genome	3	3827743-3827828	3	CRISPRCasFinder	no		cas3,WYL,csa3,Cas9_archaeal,DinG,DEDDh	Orphan	CTTCTTCGGCTCTTCTTTTTTCG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,Cas9_archaeal,DinG,DEDDh	NA,NA	NA|333aa|up_9|NZ_CP053069.1_3816054_3817053_+	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs	NA|369aa|up_8|NZ_CP053069.1_3817056_3818163_+	PRK10885, cca, multifunctional CCA addition/repair protein	NA|184aa|up_7|NZ_CP053069.1_3818222_3818774_-	pfam09361, Phasin_2, Phasin protein	NA|323aa|up_6|NZ_CP053069.1_3819281_3820250_-	cd13569, PBP2_TAXI_TRAP_like_1, Substrate binding domain of putative TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold	NA|533aa|up_5|NZ_CP053069.1_3820509_3822108_+	PRK09424, pntA, Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	NA|473aa|up_4|NZ_CP053069.1_3822123_3823542_+	pfam02233, PNTB, NAD(P) transhydrogenase beta subunit	NA|391aa|up_3|NZ_CP053069.1_3823566_3824739_-	COG1565, COG1565, Uncharacterized conserved protein [Function unknown]	NA|254aa|up_2|NZ_CP053069.1_3824793_3825555_+	PRK09135, PRK09135, pteridine reductase; Provisional	NA|287aa|up_1|NZ_CP053069.1_3825562_3826423_+	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	NA|418aa|up_0|NZ_CP053069.1_3826419_3827673_+	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]	NA|293aa|down_0|NZ_CP053069.1_3828245_3829124_-	cd07333, M48C_bepA_like, Peptidase M48C Ste24p bepA-like, integral membrane protein	NA|188aa|down_1|NZ_CP053069.1_3829120_3829684_-	pfam08239, SH3_3, Bacterial SH3 domain	NA|410aa|down_2|NZ_CP053069.1_3829710_3830940_-	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	NA|284aa|down_3|NZ_CP053069.1_3830983_3831835_-	TIGR00676, 510-methylenetetrahydrofolate_reductase	NA|289aa|down_4|NZ_CP053069.1_3831831_3832698_-	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|472aa|down_5|NZ_CP053069.1_3832697_3834113_-	pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase	NA|210aa|down_6|NZ_CP053069.1_3834368_3834998_+	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|404aa|down_7|NZ_CP053069.1_3835001_3836213_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|296aa|down_8|NZ_CP053069.1_3836281_3837169_+	PRK08905, PRK08905, lysophospholipid acyltransferase family protein	NA|295aa|down_9|NZ_CP053069.1_3837185_3838070_+	PRK06946, PRK06946, lipid A biosynthesis lauroyl acyltransferase; Provisional
