The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP052759	Pseudomonas aeruginosa strain LYT4 chromosome, complete genome	6680465	639973	722245	6680465	holin,tail,tRNA,plate	Pseudomonas_phage(37.5%)	88	NA	NA
WP_003099590.1|639973_640999_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.1	1.4e-108
WP_003085061.1|641077_641647_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003099587.1|641730_642084_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_003142783.1|642074_642617_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_003099584.1|642589_643822_-	multifunctional CCA addition/repair protein	NA	A0A076G5T8	Escherichia_phage	43.1	2.6e-77
WP_014602427.1|643865_644372_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_003099581.1|644465_646019_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_003099579.1|646015_647287_-	YeaH/YhbH family protein	NA	A0A140HLI1	Bacillus_phage	37.2	4.2e-09
WP_003085078.1|647387_649310_-	PrkA family serine protein kinase	NA	NA	NA	NA	NA
WP_003099577.1|649588_649921_-	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA	NA
WP_003099572.1|649964_650816_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	A0A2R4ALP3	Aeromonas_phage	44.2	2.4e-08
WP_003085085.1|650815_651196_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003085087.1|651232_652039_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_031671281.1|652154_653141_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
WP_003109024.1|653137_654430_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_003113209.1|654410_657185_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_003099554.1|657311_658328_+	phosphotransferase	NA	NA	NA	NA	NA
WP_003117959.1|658324_658999_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003099547.1|659000_659759_+	DnaJ domain-containing protein	NA	NA	NA	NA	NA
WP_049247156.1|659759_660821_-	alpha/beta hydrolase family protein	NA	NA	NA	NA	NA
WP_003109040.1|660972_663366_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_003085103.1|663411_664044_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_016252925.1|664172_665207_+	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003085109.1|665440_666550_+	polyamine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.4	7.8e-28
WP_033981633.1|666605_667652_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003109044.1|667766_669014_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003099535.1|669119_669950_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003085122.1|670073_670748_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003099532.1|670747_671566_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_033981631.1|671638_673117_+	anthranilate synthase component I	NA	NA	NA	NA	NA
WP_003113203.1|673434_673749_-	transcription regulatory protein PrtN	NA	NA	NA	NA	NA
WP_003113202.1|673848_674619_-	helix-turn-helix transcriptional regulator	NA	A0A1B0Z078	Pseudomonas_phage	59.1	1.4e-71
WP_003085132.1|675075_675276_+	repressor PtrB	NA	W6ATC1	Enterobacter_phage	58.3	3.7e-05
WP_003118907.1|675323_675683_+	hypothetical protein	NA	NA	NA	NA	NA
WP_073625183.1|676046_676496_+|holin	holin	holin	B5TK61	Pseudomonas_phage	54.2	1.0e-26
WP_003113200.1|676517_677033_+	hypothetical protein	NA	A0A2H4J881	uncultured_Caudovirales_phage	42.9	4.1e-32
WP_003121844.1|677029_677587_+|plate	phage baseplate assembly protein V	plate	A0A2H4JG06	uncultured_Caudovirales_phage	70.3	6.0e-45
WP_003085143.1|677739_678066_+	GPW/gp25 family protein	NA	A0A2H4JA09	uncultured_Caudovirales_phage	60.2	3.2e-30
WP_003161928.1|678062_678950_+	bacteriophage protein	NA	S4TNY7	Salmonella_phage	59.8	4.1e-88
WP_003118911.1|678942_679476_+|tail	phage tail protein I	tail	Q9ZXK7	Pseudomonas_virus	64.6	3.9e-62
WP_003161927.1|679477_681583_+|tail	phage tail protein	tail	Q9ZXK6	Pseudomonas_virus	52.7	3.0e-222
WP_016852415.1|681590_682031_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003121848.1|682073_683234_+|tail	phage tail sheath family protein	tail	Q38068	Phage_PS17	83.4	1.2e-188
WP_003085175.1|683246_683750_+|tail	phage major tail tube protein	tail	Q7M2A5	Pseudomonas_phage	73.5	8.0e-65
WP_003085178.1|683764_684109_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_033981629.1|684278_686516_+|tail	phage tail length tape measure protein	tail	NA	NA	NA	NA
WP_033938814.1|686525_687398_+|tail	phage tail protein	tail	A0A2H4J875	uncultured_Caudovirales_phage	51.7	6.7e-75
WP_003101635.1|687372_687579_+	hypothetical protein	NA	A0A2H4J9Z9	uncultured_Caudovirales_phage	64.2	2.3e-18
WP_033938816.1|687636_688626_+	phage late control D family protein	NA	A0A2H4JBF6	uncultured_Caudovirales_phage	55.8	1.3e-106
WP_033938817.1|688658_689288_+	glycoside hydrolase family 19 protein	NA	A0A125RNP1	Pseudomonas_phage	77.5	1.0e-85
WP_033938825.1|689284_689647_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031673821.1|689643_689901_+	hypothetical protein	NA	A0A125RNP3	Pseudomonas_phage	64.6	4.9e-18
WP_003113190.1|690216_690711_+	hypothetical protein	NA	A0A286S1Q8	Klebsiella_phage	56.5	1.4e-45
WP_003113189.1|690722_691070_+|tail	phage tail assembly chaperone family protein, TAC	tail	NA	NA	NA	NA
WP_031629293.1|691099_691354_+	hypothetical protein	NA	A0A2H4PI34	Pseudomonas_phage	38.4	1.4e-09
WP_033981627.1|691400_693239_+|tail	phage tail tape measure protein	tail	A0A0S2SYD9	Pseudomonas_phage	35.8	3.4e-28
WP_003113186.1|693231_693573_+|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	40.0	1.4e-17
WP_003118922.1|693580_694276_+|tail	phage minor tail protein L	tail	A0A1B0VNE0	Pseudomonas_phage	50.2	1.5e-69
WP_003129219.1|694278_695049_+	C40 family peptidase	NA	A0A2D1GNP8	Pseudomonas_phage	55.6	5.5e-81
WP_003113183.1|695103_695706_+|tail	tail assembly protein	tail	A0A1V0E8A0	Vibrio_phage	57.8	2.2e-53
WP_033981625.1|695764_699379_+|tail	phage tail protein	tail	A0A0S2SYC5	Pseudomonas_phage	54.7	0.0e+00
WP_009315197.1|699665_700403_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009315198.1|700426_701518_+	hypothetical protein	NA	A0A0S2SY45	Pseudomonas_phage	36.6	2.1e-46
WP_023085656.1|701517_701853_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003118928.1|701833_702064_+	hypothetical protein	NA	A0A1W6JT87	Pseudomonas_phage	65.3	6.7e-19
WP_009315200.1|702159_703212_+	hypothetical protein	NA	A0A0H5AXZ9	Pseudomonas_phage	52.5	2.7e-62
WP_003113177.1|703211_703514_+	hypothetical protein	NA	A0A0H5B141	Pseudomonas_phage	71.0	4.4e-34
WP_003118930.1|703510_703741_+	hypothetical protein	NA	C8ZKF3	Pseudomonas_phage	71.6	1.4e-24
WP_003117978.1|704159_704765_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	66.3	2.1e-75
WP_003085203.1|704766_705816_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	57.8	1.8e-111
WP_003085205.1|705812_706649_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	56.9	2.1e-70
WP_003085214.1|706710_707355_-	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA	NA
WP_003085219.1|707626_708049_+	OsmC family protein	NA	NA	NA	NA	NA
WP_003101641.1|708368_709163_+	adenosylmethionine decarboxylase	NA	NA	NA	NA	NA
WP_003085224.1|709217_709865_-	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA	NA
WP_003085225.1|709964_710303_-	histidine triad nucleotide-binding protein	NA	NA	NA	NA	NA
WP_003101642.1|710381_711863_+	AAA family ATPase	NA	U5XJW0	Phormidium_phage	33.5	6.7e-67
WP_003101644.1|711902_712703_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003085240.1|712763_713846_-	DUF805 domain-containing protein	NA	NA	NA	NA	NA
WP_003085244.1|713967_714936_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003085245.1|714952_715375_-	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA	NA
WP_003101649.1|715665_716700_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
WP_049247264.1|716699_717419_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003120826.1|717419_717842_+	polymer-forming cytoskeletal protein	NA	NA	NA	NA	NA
WP_003085254.1|717919_718270_+	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	53.2	3.0e-26
WP_004352281.1|718323_719415_-	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA	NA
WP_003142821.1|719417_720761_-	peptidoglycan DD-metalloendopeptidase family protein	NA	O03937	Lactobacillus_phage	44.1	3.0e-18
WP_003101660.1|721045_722245_+|tRNA	tyrosine--tRNA ligase	tRNA	NA	NA	NA	NA
>prophage 2
NZ_CP052759	Pseudomonas aeruginosa strain LYT4 chromosome, complete genome	6680465	892656	908068	6680465	integrase	Pseudomonas_phage(94.44%)	23	879761:879776	903262:903277
879761:879776	attL	GAGGCTGAGTTCGGCG	NA	NA	NA	NA
WP_003119024.1|892656_893706_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	53.9	7.7e-102
WP_169433254.1|893705_893975_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003119026.1|893979_894669_-	hypothetical protein	NA	A0A0A0YUE3	Pseudomonas_phage	98.2	4.7e-124
WP_003119027.1|894665_894854_-	hypothetical protein	NA	A0A0A0YQ21	Pseudomonas_phage	98.4	8.5e-28
WP_003119029.1|895034_895370_-	hypothetical protein	NA	A0A1W6JTA6	Pseudomonas_phage	89.2	4.5e-48
WP_033874406.1|895372_895603_-	Arc family DNA-binding protein	NA	A0A1W6JTB4	Pseudomonas_phage	94.6	4.5e-31
WP_003119030.1|895677_896475_-	Bro-N domain-containing protein	NA	A0A1W6JTB0	Pseudomonas_phage	99.6	1.1e-148
WP_042939429.1|896485_896776_-	hypothetical protein	NA	A0A1W6JTA7	Pseudomonas_phage	96.9	3.1e-45
WP_023101753.1|896786_897170_-	helix-turn-helix transcriptional regulator	NA	A0A1W6JTA9	Pseudomonas_phage	98.4	1.1e-58
WP_065427460.1|897490_897850_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031642139.1|897846_898140_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023101755.1|898252_899026_-	helix-turn-helix transcriptional regulator	NA	A0A2K8HKD5	Pseudomonas_phage	77.7	3.9e-79
WP_023465045.1|899114_899453_+	hypothetical protein	NA	A0A1W6JTD1	Pseudomonas_phage	49.4	7.9e-08
WP_023103748.1|899449_899842_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010791993.1|900147_900465_+	hypothetical protein	NA	A0A1W6JTB5	Pseudomonas_phage	77.1	3.1e-38
WP_023093231.1|900461_900734_+	hypothetical protein	NA	A0A1W6JTC3	Pseudomonas_phage	88.0	7.4e-33
WP_033973150.1|900730_901039_+	hypothetical protein	NA	A0A1W6JTC0	Pseudomonas_phage	87.3	9.0e-43
WP_088376642.1|901035_901344_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169433255.1|901396_901609_+	hypothetical protein	NA	A0A1W6JTF8	Pseudomonas_phage	73.5	2.1e-22
WP_015648201.1|901605_902445_+	helix-turn-helix domain-containing protein	NA	A0A1W6JTD5	Pseudomonas_phage	94.3	1.1e-146
WP_003085722.1|902620_903241_+	ATP-binding protein	NA	A0A1W6JTD8	Pseudomonas_phage	99.5	2.9e-109
WP_169433144.1|903237_904635_+	AAA family ATPase	NA	A0A1W6JTB3	Pseudomonas_phage	98.9	2.3e-263
903262:903277	attR	GAGGCTGAGTTCGGCG	NA	NA	NA	NA
WP_169433145.1|907258_908068_+	hypothetical protein	NA	A0A0S2SY45	Pseudomonas_phage	70.6	4.9e-88
>prophage 3
NZ_CP052759	Pseudomonas aeruginosa strain LYT4 chromosome, complete genome	6680465	1256050	1292103	6680465	head,tRNA,terminase,portal,integrase,protease,holin	uncultured_Caudovirales_phage(42.11%)	41	1263726:1263742	1277966:1277982
WP_003113794.1|1256050_1258903_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.0	1.0e-148
WP_003112023.1|1259023_1259392_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003100593.1|1259403_1259832_-	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
WP_049247286.1|1259828_1261316_-	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	36.1	1.0e-51
WP_003129596.1|1261652_1262465_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003122093.1|1262548_1263472_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003092864.1|1263663_1264782_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
1263726:1263742	attL	GCTGCTGGTGATCATCA	NA	NA	NA	NA
WP_003092863.1|1264774_1265842_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_023113282.1|1265973_1266471_-	RDD family protein	NA	NA	NA	NA	NA
WP_003092861.1|1266600_1268181_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_033971096.1|1268680_1269679_+|integrase	site-specific integrase	integrase	A0A0A0YR56	Pseudomonas_phage	96.5	1.7e-151
WP_019726660.1|1269747_1270059_+	outer membrane protein assembly factor BamE	NA	J7HXI2	Pseudomonas_phage	86.3	1.8e-46
WP_033971086.1|1270147_1270927_+	DUF3800 domain-containing protein	NA	NA	NA	NA	NA
WP_033971085.1|1271240_1271543_-	hypothetical protein	NA	A0A0A0YRS6	Pseudomonas_phage	92.1	1.6e-47
WP_033967225.1|1271643_1271856_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169433149.1|1271852_1273733_-	DNA cytosine methyltransferase	NA	Q5QF27	Pseudomonas_virus	43.0	3.4e-132
WP_169433150.1|1273729_1273882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033971084.1|1273890_1274625_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028680747.1|1274691_1275501_-	DUF2303 family protein	NA	A0A2R2Z323	Escherichia_phage	42.0	6.9e-50
WP_031632202.1|1275546_1275894_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019726652.1|1276111_1276348_-	pyocin activator PrtN family protein	NA	A0A2H4J8B4	uncultured_Caudovirales_phage	40.3	6.1e-07
WP_028680745.1|1276344_1276713_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028680744.1|1276709_1276994_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028680743.1|1277005_1277575_-	deoxynucleotide monophosphate kinase	NA	A0A2H4J8A1	uncultured_Caudovirales_phage	49.5	8.0e-45
WP_028680742.1|1277571_1277880_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078451259.1|1278173_1278731_-	helix-turn-helix transcriptional regulator	NA	A0A1W6JNY2	Morganella_phage	44.0	2.9e-23
1277966:1277982	attR	TGATGATCACCAGCAGC	NA	NA	NA	NA
WP_028680740.1|1278962_1279193_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019726644.1|1279382_1279586_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033980361.1|1279792_1280293_+	hypothetical protein	NA	A0A2H4JFM0	uncultured_Caudovirales_phage	61.0	8.0e-33
WP_019726642.1|1280285_1280528_+	TraR/DksA C4-type zinc finger protein	NA	Q9ZXI6	Pseudomonas_virus	53.0	2.7e-10
WP_033980362.1|1280524_1283263_+	bifunctional DNA primase/polymerase	NA	A0A2H4JF22	uncultured_Caudovirales_phage	64.0	0.0e+00
WP_124182786.1|1283602_1284160_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004353017.1|1284358_1284724_+	hypothetical protein	NA	E5E3W4	Burkholderia_phage	48.2	1.0e-13
WP_025325111.1|1284728_1285007_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_033867811.1|1285009_1285747_+	hypothetical protein	NA	A0A1B0Z000	Pseudomonas_phage	46.6	2.0e-43
WP_023087718.1|1286003_1286594_+	hypothetical protein	NA	A0A2H4JG15	uncultured_Caudovirales_phage	54.5	8.8e-47
WP_058168928.1|1286597_1288613_+|terminase	phage terminase large subunit family protein	terminase	A0A2H4J898	uncultured_Caudovirales_phage	64.0	6.6e-259
WP_169433151.1|1288624_1288849_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169433152.1|1288848_1290315_+|portal	phage portal protein	portal	A0A2H4JFL5	uncultured_Caudovirales_phage	66.0	3.3e-175
WP_019726635.1|1290298_1291471_+|protease	Clp protease ClpP	protease	A0A2H4JDI2	uncultured_Caudovirales_phage	49.6	5.1e-86
WP_073652324.1|1291467_1292103_+|head	head decoration protein	head	NA	NA	NA	NA
>prophage 4
NZ_CP052759	Pseudomonas aeruginosa strain LYT4 chromosome, complete genome	6680465	1299074	1314622	6680465	tRNA	Pseudomonas_phage(25.0%)	14	NA	NA
WP_019727251.1|1299074_1302626_+	hypothetical protein	NA	A0A0M4U447	Ralstonia_phage	34.9	5.0e-177
WP_016561962.1|1302625_1303627_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031632192.1|1303611_1304484_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169433155.1|1304480_1306241_+	hypothetical protein	NA	A0A2I7S8R8	Vibrio_phage	23.7	1.3e-24
WP_058133568.1|1306240_1306477_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169433156.1|1306723_1307353_+	glycoside hydrolase family 19 protein	NA	A0A125RNP1	Pseudomonas_phage	87.6	7.4e-100
WP_134404657.1|1307349_1307718_+	hypothetical protein	NA	H2BDD6	Pseudomonas_virus	64.8	7.2e-31
WP_019726621.1|1307714_1307975_+	hypothetical protein	NA	B5WZU5	Pseudomonas_phage	72.1	6.9e-28
WP_134404660.1|1308119_1308923_+	DNA adenine methylase	NA	C7BGE1	Burkholderia_phage	65.0	1.1e-100
WP_044069562.1|1309272_1310175_-	hypothetical protein	NA	NA	NA	NA	NA
WP_044069561.1|1310174_1311422_-	DNA cytosine methyltransferase	NA	M1PSQ0	Streptococcus_phage	36.0	8.1e-58
WP_128662525.1|1311846_1312173_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003137849.1|1312447_1313491_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003100607.1|1313503_1314622_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	49.9	6.7e-96
>prophage 5
NZ_CP052759	Pseudomonas aeruginosa strain LYT4 chromosome, complete genome	6680465	1533503	1542533	6680465		Bacillus_phage(33.33%)	8	NA	NA
WP_003098558.1|1533503_1534139_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.3	1.0e-40
WP_033981793.1|1534184_1535078_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A0S2SXL7	Bacillus_phage	34.3	3.0e-06
WP_003113871.1|1535182_1536187_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.3	7.0e-36
WP_003092272.1|1536614_1536938_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_003113873.1|1537004_1539572_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	22.1	3.2e-24
WP_012613731.1|1539697_1540705_-	TolB family protein	NA	NA	NA	NA	NA
WP_003092262.1|1540852_1541359_+	CinA family protein	NA	B5TK85	Pseudomonas_phage	76.0	8.1e-57
WP_003092260.1|1541492_1542533_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	59.5	1.5e-113
>prophage 6
NZ_CP052759	Pseudomonas aeruginosa strain LYT4 chromosome, complete genome	6680465	2422516	2473092	6680465	tRNA,tail,terminase,integrase,holin	Pseudomonas_phage(71.15%)	65	2419808:2419825	2451085:2451102
2419808:2419825	attL	GCAGGGCGGTGAAGCGCG	NA	NA	NA	NA
WP_003119890.1|2422516_2423701_+	SpoIIE family protein phosphatase	NA	Q56AR1	Bacillus_thuringiensis_phage	31.9	7.3e-08
WP_003104052.1|2423697_2424180_+	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_003090868.1|2424267_2425191_-	transaldolase	NA	A0A1D8KMI9	Synechococcus_phage	30.0	6.5e-12
WP_023911957.1|2425270_2426275_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_031628314.1|2426378_2427485_+|integrase	tyrosine-type recombinase/integrase	integrase	L7TP61	Pseudomonas_virus	99.7	3.5e-214
WP_003160559.1|2427494_2427779_-	pyocin activator PrtN family protein	NA	A0A2K8HN48	Pseudomonas_phage	100.0	8.0e-46
WP_034033528.1|2427854_2428241_-	hypothetical protein	NA	L7TJJ9	Pseudomonas_virus	98.4	2.3e-64
WP_049885749.1|2428356_2428884_-	hypothetical protein	NA	A0A0A0YRT2	Pseudomonas_phage	76.6	1.5e-34
WP_046720483.1|2428880_2429264_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046720645.1|2429265_2429829_-	hypothetical protein	NA	Q5QF38	Pseudomonas_virus	68.2	6.7e-60
WP_169433162.1|2430502_2431258_-	hypothetical protein	NA	Q5QF32	Pseudomonas_virus	96.8	5.8e-144
WP_161113810.1|2431254_2431896_-	hypothetical protein	NA	Q5QF31	Pseudomonas_virus	93.9	1.1e-119
WP_169433163.1|2432321_2434268_-	DNA cytosine methyltransferase	NA	A0A1B0V7P0	Salmonella_phage	39.4	9.0e-96
WP_169433164.1|2434264_2435650_-	site-specific DNA-methyltransferase	NA	A0A2P1CD82	Mycobacterium_phage	40.8	3.2e-79
WP_033986498.1|2436296_2436593_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169433165.1|2436642_2438388_-	AAA family ATPase	NA	H2BD46	Pseudomonas_phage	94.1	3.6e-290
WP_009314053.1|2439334_2439535_-	hypothetical protein	NA	J7I437	Pseudomonas_phage	100.0	1.9e-30
WP_102969935.1|2439541_2440360_-	hypothetical protein	NA	H2BD49	Pseudomonas_phage	98.9	8.0e-155
WP_169433166.1|2440371_2441175_-	PD-(D/E)XK nuclease family protein	NA	H2BD50	Pseudomonas_phage	97.0	1.2e-150
WP_003116743.1|2441182_2441320_-	hypothetical protein	NA	J7I432	Pseudomonas_phage	100.0	8.3e-17
WP_058134986.1|2441303_2441495_-	hypothetical protein	NA	J7HXB2	Pseudomonas_phage	96.8	2.1e-26
WP_010793151.1|2441491_2441713_-	hypothetical protein	NA	A0A127KNM7	Pseudomonas_phage	95.7	2.8e-30
WP_162532020.1|2441696_2441852_-	hypothetical protein	NA	A0A2K8HR67	Pseudomonas_phage	93.5	5.9e-11
WP_048764766.1|2441848_2442352_-	hypothetical protein	NA	J7I0S8	Pseudomonas_phage	98.8	3.8e-99
WP_010793149.1|2442749_2442998_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169433167.1|2443011_2443380_-	carbon storage regulator CsrA	NA	J7I430	Pseudomonas_phage	98.4	4.6e-62
WP_169433168.1|2443412_2443676_-	hypothetical protein	NA	H2BD57	Pseudomonas_phage	97.7	1.4e-44
WP_015975440.1|2443830_2444043_-	hypothetical protein	NA	A0A0U1VYM8	Pseudomonas_phage	100.0	4.0e-34
WP_169433169.1|2444135_2445083_+	hypothetical protein	NA	A0A1B5FPB0	Escherichia_phage	33.9	2.7e-13
WP_124078857.1|2445157_2445469_+	hypothetical protein	NA	A0A2H4J0J8	uncultured_Caudovirales_phage	49.5	9.1e-19
WP_128651291.1|2445465_2445729_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169433258.1|2446196_2446529_+	DUF1654 domain-containing protein	NA	H2BD60	Pseudomonas_phage	92.7	7.7e-48
WP_071536922.1|2446928_2447504_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071536923.1|2447490_2447835_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169433170.1|2447874_2448726_-	LexA family transcriptional regulator	NA	A0A2D1GNH0	Pseudomonas_phage	54.8	2.9e-83
WP_003451709.1|2448824_2449043_+	helix-turn-helix domain-containing protein	NA	A0A2D1GND2	Pseudomonas_phage	64.7	2.9e-19
WP_016046669.1|2449074_2449647_+	hypothetical protein	NA	H2BD67	Pseudomonas_phage	100.0	9.3e-102
WP_034015940.1|2449729_2450083_-	hypothetical protein	NA	NA	NA	NA	NA
WP_034049853.1|2450149_2451043_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003103373.1|2451092_2451701_+	hypothetical protein	NA	A0A2H4J6S4	uncultured_Caudovirales_phage	43.9	3.4e-41
2451085:2451102	attR	GCAGGGCGGTGAAGCGCG	NA	NA	NA	NA
WP_169433171.1|2451693_2452137_+	RusA family crossover junction endodeoxyribonuclease	NA	J7I4J7	Pseudomonas_phage	98.0	4.0e-76
WP_088170865.1|2452165_2452852_+	hypothetical protein	NA	H2BD72	Pseudomonas_phage	99.6	2.2e-129
WP_010793141.1|2452992_2453181_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169433172.1|2453490_2453880_+	hypothetical protein	NA	H2BD73	Pseudomonas_phage	98.4	3.8e-62
WP_003116758.1|2453872_2454157_+|holin	phage holin family protein	holin	H2BD74	Pseudomonas_phage	100.0	1.2e-41
WP_073674929.1|2454165_2454765_+|terminase	terminase small subunit	terminase	H2BD75	Pseudomonas_phage	59.2	1.9e-44
WP_034029085.1|2455710_2456367_+|tail	phage tail protein	tail	A0A0S2SYG8	Pseudomonas_phage	95.9	7.4e-111
WP_169433173.1|2456376_2456694_+	hypothetical protein	NA	A0A0S2SYT8	Pseudomonas_phage	97.1	5.2e-54
WP_033950162.1|2456711_2457002_+	DUF1799 domain-containing protein	NA	A0A0S2SY90	Pseudomonas_phage	90.5	6.5e-35
WP_169433174.1|2457005_2460023_+|tail	phage tail tape measure protein	tail	A0A0S2SYD9	Pseudomonas_phage	93.7	0.0e+00
WP_033946792.1|2460025_2460364_+|tail	phage tail protein	tail	A0A2H4JI07	uncultured_Caudovirales_phage	58.9	5.2e-36
WP_169433175.1|2460360_2461110_+|tail	phage minor tail protein L	tail	A0A0S2SY57	Pseudomonas_phage	98.8	3.3e-147
WP_169433176.1|2461112_2461877_+	C40 family peptidase	NA	A0A0S2SY75	Pseudomonas_phage	99.6	1.2e-147
WP_169433177.1|2461948_2462530_+	SPOR domain-containing protein	NA	A0A2H4J0E0	uncultured_Caudovirales_phage	46.6	2.2e-10
WP_169433178.1|2462595_2463174_+|tail	tail assembly protein	tail	A0A0S2SYS2	Pseudomonas_phage	87.6	6.6e-87
WP_169433179.1|2463194_2463638_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169433180.1|2463783_2467446_+|tail	phage tail protein	tail	A0A0S2SYC5	Pseudomonas_phage	86.5	0.0e+00
WP_010793120.1|2468425_2469235_+	hypothetical protein	NA	A0A0S2SY45	Pseudomonas_phage	71.3	7.5e-89
WP_043155338.1|2469234_2469537_+	hypothetical protein	NA	A0A0S2SY61	Pseudomonas_phage	87.0	8.8e-43
WP_121348604.1|2469533_2469773_+	hypothetical protein	NA	A0A0S3UFY6	Pseudomonas_phage	97.3	2.0e-34
WP_162978862.1|2469835_2471479_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169433181.1|2471538_2472168_+	glycoside hydrolase family 19 protein	NA	A0A125RNP1	Pseudomonas_phage	95.2	5.4e-111
WP_003160544.1|2472164_2472533_+	hypothetical protein	NA	H2BDD6	Pseudomonas_virus	78.7	1.0e-40
WP_003160543.1|2472529_2472793_+	hypothetical protein	NA	A0A0U4B0B7	Pseudomonas_phage	98.8	1.3e-37
WP_003160542.1|2472828_2473092_+	hypothetical protein	NA	Q9MC87	Pseudomonas_phage	94.3	9.0e-44
>prophage 7
NZ_CP052759	Pseudomonas aeruginosa strain LYT4 chromosome, complete genome	6680465	2677170	2684063	6680465	tRNA	uncultured_Caudovirales_phage(83.33%)	9	NA	NA
WP_003097631.1|2677170_2678451_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.4	8.2e-98
WP_003113366.1|2678452_2679850_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003097628.1|2679854_2680829_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_003097625.1|2680916_2681900_-	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	74.0	3.5e-141
WP_003090393.1|2681896_2682232_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	69.4	3.3e-38
WP_003090391.1|2682228_2682534_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA	NA
WP_012613994.1|2682533_2682893_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	61.7	3.1e-34
WP_003090387.1|2682889_2683285_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	72.1	2.7e-47
WP_003090386.1|2683394_2684063_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	82.1	1.5e-90
>prophage 8
NZ_CP052759	Pseudomonas aeruginosa strain LYT4 chromosome, complete genome	6680465	4785479	4855307	6680465	head,tRNA,tail,terminase,capsid,portal	Acidithiobacillus_phage(45.0%)	88	NA	NA
WP_012479850.1|4785479_4785743_+	hypothetical protein	NA	K4I3X3	Acidithiobacillus_phage	60.9	2.3e-23
WP_049246972.1|4785754_4786231_+	hypothetical protein	NA	K4HZ96	Acidithiobacillus_phage	65.8	3.0e-53
WP_049246975.1|4786236_4786998_+	antirepressor	NA	K4I1D2	Acidithiobacillus_phage	68.1	2.3e-87
WP_169433210.1|4786997_4787990_+	AAA family ATPase	NA	K4I3Y2	Acidithiobacillus_phage	65.1	9.6e-78
WP_169433211.1|4787986_4789249_+	site-specific DNA-methyltransferase	NA	A0A2H4JGF1	uncultured_Caudovirales_phage	88.3	6.4e-220
WP_169433212.1|4789212_4789581_-	hypothetical protein	NA	K4ICP1	Acidithiobacillus_phage	80.8	9.7e-52
WP_169433263.1|4789686_4789956_-	hypothetical protein	NA	K4HZA7	Acidithiobacillus_phage	54.5	3.7e-16
WP_169433213.1|4790056_4790578_-	DUF3489 domain-containing protein	NA	A0A2H4JE21	uncultured_Caudovirales_phage	78.8	7.6e-34
WP_169433214.1|4790673_4790880_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169433264.1|4790986_4791532_+	elements of external origin	NA	A0A2H4JCL4	uncultured_Caudovirales_phage	66.9	4.0e-54
WP_169433215.1|4791531_4793493_+|terminase	phage terminase large subunit family protein	terminase	A0A2H4JIC6	uncultured_Caudovirales_phage	89.8	0.0e+00
WP_169433216.1|4793921_4794980_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169433217.1|4794976_4796560_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169433218.1|4796562_4797351_+	DUF2163 domain-containing protein	NA	A0A0S0MV27	Pseudomonas_phage	33.9	2.2e-29
WP_045667461.1|4797369_4797597_+	hypothetical protein	NA	A0A2K8HRJ9	Pseudomonas_phage	63.6	7.4e-10
WP_045667462.1|4797593_4797815_+	hypothetical protein	NA	A0A2K8I9R5	Pseudomonas_phage	55.9	1.9e-10
WP_169433219.1|4797814_4800088_+|tail	phage tail protein	tail	A0A2K8HP68	Pseudomonas_phage	38.5	1.4e-129
WP_169433220.1|4800087_4800696_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169433221.1|4800699_4801050_+	DUF2793 domain-containing protein	NA	A0A1X9IAR6	Xanthomonas_phage	64.7	1.3e-37
WP_169433222.1|4801113_4801416_+	hypothetical protein	NA	K4I011	Acidithiobacillus_phage	67.9	1.6e-23
WP_045667467.1|4801412_4801640_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169433223.1|4801636_4802146_+	lysozyme	NA	A0A0A8KXN5	Burkholderia_phage	39.5	1.1e-18
WP_169433224.1|4802142_4802640_+	hypothetical protein	NA	A0A1S5NQ26	Burkholderia_phage	66.7	2.9e-27
WP_169433225.1|4803013_4804723_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169433265.1|4804826_4805744_+	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_169433226.1|4805751_4806612_-	site-specific DNA-methyltransferase	NA	R4THJ7	Phaeocystis_globosa_virus	37.2	4.2e-45
WP_169433227.1|4806613_4807597_-	site-specific DNA-methyltransferase	NA	M4T1C0	Cyanophage	30.2	1.4e-09
WP_169433228.1|4807611_4807905_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_169433229.1|4807934_4809797_+	AAA family ATPase	NA	K4I1H4	Acidithiobacillus_phage	27.3	6.7e-16
WP_169433230.1|4809850_4811140_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169433266.1|4811422_4812061_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049246949.1|4812503_4812977_-	hypothetical protein	NA	K4I1C7	Acidithiobacillus_phage	61.0	1.6e-46
WP_049246951.1|4812973_4813345_-	hypothetical protein	NA	K4HZX2	Acidithiobacillus_phage	71.2	2.3e-45
WP_049246952.1|4813344_4814724_-	recombinase family protein	NA	K4ICM1	Acidithiobacillus_phage	88.7	1.4e-236
WP_049246955.1|4814720_4815170_-	DUF2924 domain-containing protein	NA	K4I3X1	Acidithiobacillus_phage	87.2	5.7e-70
WP_049246957.1|4815169_4815373_-	hypothetical protein	NA	K4HZ94	Acidithiobacillus_phage	70.1	5.8e-14
WP_049246960.1|4815544_4815823_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_049246962.1|4815823_4816636_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049246964.1|4816733_4818158_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049246967.1|4818171_4819101_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012479850.1|4819195_4819459_+	hypothetical protein	NA	K4I3X3	Acidithiobacillus_phage	60.9	2.3e-23
WP_049246972.1|4819470_4819947_+	hypothetical protein	NA	K4HZ96	Acidithiobacillus_phage	65.8	3.0e-53
WP_049246975.1|4819952_4820714_+	antirepressor	NA	K4I1D2	Acidithiobacillus_phage	68.1	2.3e-87
WP_049246977.1|4820713_4821574_+	ATP-binding protein	NA	K4HZX9	Acidithiobacillus_phage	70.0	4.1e-109
WP_049246979.1|4821579_4822227_+	hypothetical protein	NA	K4ICM8	Acidithiobacillus_phage	73.4	1.4e-82
WP_049246981.1|4822236_4822737_+	hypothetical protein	NA	K4I3X7	Acidithiobacillus_phage	73.0	1.9e-66
WP_049246983.1|4822733_4823471_+|tRNA	isoleucyl-tRNA synthetase	tRNA	K4HZA0	Acidithiobacillus_phage	75.0	1.0e-108
WP_049246986.1|4823467_4823722_+	hypothetical protein	NA	K4I1D6	Acidithiobacillus_phage	67.5	1.6e-21
WP_049246988.1|4823718_4826016_+	hypothetical protein	NA	K4HZY1	Acidithiobacillus_phage	72.2	0.0e+00
WP_049246990.1|4826145_4826622_+	hypothetical protein	NA	K4ICN3	Acidithiobacillus_phage	76.2	7.1e-63
WP_049246993.1|4826623_4826833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049246996.1|4826825_4827254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169433231.1|4827598_4829035_+	site-specific DNA-methyltransferase	NA	K4I3Y2	Acidithiobacillus_phage	61.5	4.3e-164
WP_169433232.1|4829031_4830267_+	site-specific DNA-methyltransferase	NA	A0A2H4JGF1	uncultured_Caudovirales_phage	87.8	2.8e-212
WP_049247001.1|4830226_4830451_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049247004.1|4830450_4830816_-	hypothetical protein	NA	A0A2H4JI44	uncultured_Caudovirales_phage	79.3	1.3e-53
WP_049247006.1|4830913_4831201_-	hypothetical protein	NA	K4HZA7	Acidithiobacillus_phage	35.6	1.3e-06
WP_049247008.1|4831297_4831894_-	DUF3489 domain-containing protein	NA	A0A2H4JE21	uncultured_Caudovirales_phage	77.5	1.5e-33
WP_049247010.1|4832001_4832208_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049247013.1|4832318_4832885_+	hypothetical protein	NA	A0A2H4JCL4	uncultured_Caudovirales_phage	62.8	1.5e-51
WP_049247014.1|4832887_4834837_+|terminase	phage terminase large subunit family protein	terminase	A0A2H4JIC6	uncultured_Caudovirales_phage	88.5	0.0e+00
WP_049247016.1|4834854_4835346_+	hypothetical protein	NA	A0A0F6WCR7	Sinorhizobium_phage	49.7	3.8e-27
WP_049247018.1|4835345_4835738_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049247020.1|4835737_4835959_+	hypothetical protein	NA	A0A2H4JCJ9	uncultured_Caudovirales_phage	57.5	2.0e-12
WP_049247026.1|4835961_4837470_+|portal	phage portal protein	portal	A0A1B2LRR5	Wolbachia_phage	57.0	1.7e-150
WP_049247030.1|4837471_4838806_+	S49 family peptidase	NA	K4HZZ6	Acidithiobacillus_phage	43.9	3.1e-63
WP_049247031.1|4838809_4839187_+|head	head decoration protein	head	A0A1B2LRT0	Wolbachia_phage	52.8	1.6e-25
WP_049247033.1|4839261_4840284_+|capsid	major capsid protein	capsid	Q9JMM2	Wolbachia_phage	63.5	4.2e-121
WP_049247034.1|4840291_4840570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049247036.1|4840580_4841006_+	hypothetical protein	NA	F4YCS3	Synechococcus_phage	30.2	6.9e-09
WP_049247037.1|4841013_4841217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049247038.1|4841219_4841972_+	hypothetical protein	NA	A0A2D2W2E0	Stenotrophomonas_phage	49.2	3.5e-56
WP_049247039.1|4841983_4842397_+	hypothetical protein	NA	NA	NA	NA	NA
WP_124086481.1|4842393_4842597_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049247040.1|4842586_4843234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049247041.1|4843237_4846633_+	tape measure protein	NA	A0A125RN77	Pseudomonas_phage	32.6	1.6e-31
WP_049247043.1|4846650_4847709_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049247045.1|4847705_4849268_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049247046.1|4849270_4850059_+	DUF2163 domain-containing protein	NA	A0A0S0MV27	Pseudomonas_phage	30.9	2.3e-26
WP_031688351.1|4850077_4850305_+	hypothetical protein	NA	A0A2K8HRJ9	Pseudomonas_phage	63.6	7.4e-10
WP_049247047.1|4850301_4850508_+	hypothetical protein	NA	A0A2D0W982	Bordetella_phage	60.7	3.9e-10
WP_049247050.1|4850507_4852781_+|tail	tail assembly protein	tail	A0A1L2C8W7	Pseudomonas_phage	38.8	3.0e-135
WP_049247051.1|4852780_4853377_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049247052.1|4853379_4853730_+	DUF2793 domain-containing protein	NA	A0A1X9IAR6	Xanthomonas_phage	63.8	1.7e-37
WP_049247054.1|4853795_4854086_+	hypothetical protein	NA	K4I011	Acidithiobacillus_phage	68.9	3.2e-26
WP_049247055.1|4854082_4854304_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049247056.1|4854300_4854813_+	lysozyme	NA	A0A0A8KXN5	Burkholderia_phage	41.8	2.3e-19
WP_049247057.1|4854809_4855307_+	hypothetical protein	NA	A4PE37	Ralstonia_virus	50.3	7.2e-26
>prophage 9
NZ_CP052759	Pseudomonas aeruginosa strain LYT4 chromosome, complete genome	6680465	4978867	5022528	6680465	lysis,transposase,integrase,terminase	Pseudomonas_phage(92.31%)	58	4968682:4968699	5018578:5018595
4968682:4968699	attL	CCAGGGCTTCGGCGTCGC	NA	NA	NA	NA
WP_119565474.1|4978867_4979092_-	hypothetical protein	NA	A0A0A1IX79	Pseudomonas_phage	95.9	2.3e-32
WP_021204930.1|4979170_4979458_-	hypothetical protein	NA	B7SE14	Pseudomonas_virus	98.9	7.3e-47
WP_169433234.1|4979454_4980603_-	DUF2793 domain-containing protein	NA	B7SE13	Pseudomonas_virus	85.6	1.5e-191
WP_033961512.1|4980599_4982810_-	bacteriophage protein	NA	Q5ZQV9	Pseudomonas_phage	98.5	0.0e+00
WP_078452072.1|4982796_4983027_-	hypothetical protein	NA	Q5ZQW0	Pseudomonas_phage	98.7	4.2e-37
WP_003094285.1|4983023_4983254_-	hypothetical protein	NA	Q5ZQW1	Pseudomonas_phage	100.0	1.2e-36
WP_003156591.1|4983263_4984082_-	DUF2163 domain-containing protein	NA	Q5ZQW2	Pseudomonas_phage	100.0	2.0e-166
WP_119565471.1|4984068_4985775_-	hypothetical protein	NA	Q5ZQW3	Pseudomonas_phage	97.5	0.0e+00
WP_039843240.1|4985774_4986698_-	hypothetical protein	NA	B7SDV6	Pseudomonas_virus	97.1	9.2e-184
WP_119565470.1|4986699_4987656_-	hypothetical protein	NA	A0A1C6ZDR1	Pseudomonas_phage	94.7	1.5e-184
WP_119565469.1|4987655_4990955_-	tape measure protein	NA	Q5ZQW6	Pseudomonas_phage	94.2	0.0e+00
WP_021204938.1|4991035_4991830_-	DNA adenine methylase	NA	Q5ZQW7	Pseudomonas_phage	99.2	1.3e-154
WP_152959602.1|4991799_4991994_-	Com family DNA-binding transcriptional regulator	NA	Q5ZQW8	Pseudomonas_phage	98.4	7.9e-29
WP_021204939.1|4992120_4992273_-	hypothetical protein	NA	Q5ZQX0	Pseudomonas_phage	90.7	9.6e-14
WP_021204940.1|4992269_4992785_-	hypothetical protein	NA	Q5ZQX1	Pseudomonas_phage	72.4	7.9e-60
WP_021204941.1|4992787_4993528_-	hypothetical protein	NA	J9SVZ4	Pseudomonas_phage	68.3	4.6e-93
WP_021204942.1|4993532_4993727_-	hypothetical protein	NA	J9RWG5	Pseudomonas_phage	54.4	1.1e-06
WP_021204943.1|4993723_4994188_-	hypothetical protein	NA	Q5ZQX4	Pseudomonas_phage	89.6	4.5e-78
WP_021204944.1|4994189_4994708_-	DUF1320 domain-containing protein	NA	Q5ZQX5	Pseudomonas_phage	98.8	6.5e-94
WP_021204945.1|4994709_4994997_-	hypothetical protein	NA	A0A0S4L5D5	Pseudomonas_phage	64.8	1.2e-25
WP_021204946.1|4994996_4995632_-	hypothetical protein	NA	Q5ZQX6	Pseudomonas_phage	90.0	2.2e-96
WP_021204947.1|4995644_4996574_-	hypothetical protein	NA	Q5ZQX7	Pseudomonas_phage	98.4	4.2e-176
WP_021204948.1|4996585_4996963_-	DUF2190 family protein	NA	Q5ZQX8	Pseudomonas_phage	98.4	1.0e-56
WP_021204949.1|4996966_4998148_-	hypothetical protein	NA	Q5ZQY0	Pseudomonas_phage	98.0	1.1e-168
WP_015975387.1|4998437_4999010_-	phage virion morphogenesis protein	NA	Q5ZQY1	Pseudomonas_phage	100.0	4.8e-106
WP_021204950.1|4999133_5000390_-	hypothetical protein	NA	Q5ZQY3	Pseudomonas_phage	99.3	8.6e-241
WP_015975384.1|5000389_5001856_-	DUF935 family protein	NA	Q5ZQY4	Pseudomonas_phage	100.0	1.0e-285
WP_015975383.1|5001855_5003316_-|terminase	large terminase subunit	terminase	Q5ZQY5	Pseudomonas_phage	100.0	1.8e-290
WP_021204951.1|5003315_5003888_-	DUF3486 family protein	NA	Q5ZQY6	Pseudomonas_phage	100.0	6.1e-93
WP_015975381.1|5003894_5004203_-	hypothetical protein	NA	Q5ZQY7	Pseudomonas_phage	100.0	2.3e-54
WP_015975380.1|5004192_5004582_-	hypothetical protein	NA	Q5ZQY8	Pseudomonas_phage	100.0	7.6e-63
WP_086223083.1|5004585_5005197_-|lysis	lysis protein	lysis	Q5ZQY9	Pseudomonas_phage	99.0	3.4e-102
WP_119565468.1|5005392_5006022_-	transglycosylase SLT domain-containing protein	NA	J9SH25	Pseudomonas_phage	99.0	3.7e-120
WP_162836233.1|5006018_5006177_-	hypothetical protein	NA	J9SNF4	Pseudomonas_phage	98.1	1.3e-21
WP_003138152.1|5006179_5006437_-	membrane protein	NA	J9STQ9	Pseudomonas_phage	100.0	5.6e-38
WP_124084312.1|5006772_5007216_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169433235.1|5007740_5008001_-	hypothetical protein	NA	J9SH16	Pseudomonas_phage	80.4	9.0e-12
WP_003142304.1|5008185_5008416_+	DNA-binding protein	NA	J9RW65	Pseudomonas_phage	100.0	2.5e-37
WP_015649394.1|5008700_5008925_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033967144.1|5009048_5009537_+	hypothetical protein	NA	J9SHM0	Pseudomonas_phage	99.4	2.2e-91
WP_003142306.1|5009529_5009790_+	hypothetical protein	NA	J9RWD0	Pseudomonas_phage	95.3	1.5e-38
WP_034019336.1|5009786_5010101_+	hypothetical protein	NA	J9SUN0	Pseudomonas_phage	97.1	1.9e-48
WP_053814044.1|5010110_5011085_+	hypothetical protein	NA	J9RW58	Pseudomonas_phage	98.4	4.7e-154
WP_119565465.1|5011088_5012873_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	J9SGQ3	Pseudomonas_phage	98.5	0.0e+00
WP_119565464.1|5012872_5014039_+	AAA family ATPase	NA	J9SNL1	Pseudomonas_phage	99.2	1.5e-215
WP_053813821.1|5014040_5014382_+	hypothetical protein	NA	J9RWC3	Pseudomonas_phage	96.5	3.3e-54
WP_039843387.1|5014378_5014663_+	hypothetical protein	NA	J9SGZ7	Pseudomonas_phage	89.4	1.1e-39
WP_033938129.1|5014662_5014917_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015649401.1|5015063_5015687_+	DUF3164 family protein	NA	Q5ZR10	Pseudomonas_phage	99.5	1.0e-109
WP_003094188.1|5015688_5016378_+	DUF2786 domain-containing protein	NA	Q5ZR11	Pseudomonas_phage	100.0	1.3e-126
WP_003127807.1|5016379_5016571_+	hypothetical protein	NA	J9SNB0	Pseudomonas_phage	100.0	8.6e-28
WP_021204961.1|5016570_5017038_+	hypothetical protein	NA	A0A0S4L0B8	Pseudomonas_phage	100.0	6.1e-59
WP_021204962.1|5017024_5017588_+	regulatory protein GemA	NA	A0A0S4L518	Pseudomonas_phage	100.0	1.9e-99
WP_015975359.1|5017590_5017953_+	transcriptional regulator	NA	Q5ZR15	Pseudomonas_phage	100.0	2.3e-61
WP_003116513.1|5018162_5019059_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
5018578:5018595	attR	GCGACGCCGAAGCCCTGG	NA	NA	NA	NA
WP_003085490.1|5019115_5019760_+	two pore domain potassium channel family protein	NA	NA	NA	NA	NA
WP_003110820.1|5019875_5020517_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_019372103.1|5020551_5022528_-	alkyl/aryl-sulfatase	NA	M1I0S7	Paramecium_bursaria_Chlorella_virus	44.6	8.9e-160
>prophage 1
NZ_CP052760	Pseudomonas aeruginosa strain LYT4 plasmid unnamed1, complete sequence	133551	18090	57006	133551	integrase,transposase	Lysinibacillus_phage(20.0%)	50	14042:14055	58400:58413
14042:14055	attL	ATCCTCGAGGTCGG	NA	NA	NA	NA
WP_004577240.1|18090_19053_-|transposase	IS30-like element ISPpu17 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.7	9.7e-43
WP_019818069.1|19707_21264_-|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	46.7	1.3e-121
WP_019719038.1|21345_21681_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_078451037.1|21677_22046_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_105446667.1|22493_22976_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_105446666.1|23154_24141_-	virulence RhuM family protein	NA	Q9JMN3	Wolbachia_phage	38.5	4.6e-16
WP_108116213.1|24194_24968_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105446664.1|24979_25255_-	hypothetical protein	NA	NA	NA	NA	NA
WP_108116215.1|25279_25507_-	Arc family DNA-binding protein	NA	NA	NA	NA	NA
WP_108116217.1|25503_25788_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105446662.1|26122_26413_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105446661.1|26423_26621_-	hypothetical protein	NA	NA	NA	NA	NA
WP_123809510.1|26638_26875_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105446659.1|27230_27536_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105446688.1|27556_27850_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105446658.1|27948_28263_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023121457.1|28357_28645_-	hypothetical protein	NA	A0A0K0L9C8	Pseudomonas_phage	40.2	1.6e-09
WP_023121456.1|28659_28905_-	hypothetical protein	NA	NA	NA	NA	NA
WP_108116219.1|28922_29207_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004574636.1|29323_30613_-|transposase	ISL3-like element ISPpu12 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	40.4	9.5e-86
WP_003821921.1|30634_31147_-	signal peptidase II	NA	NA	NA	NA	NA
WP_004364974.1|31150_32047_-	cation transporter	NA	NA	NA	NA	NA
WP_009403731.1|32142_32550_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_169433270.1|32698_34057_-	DUF1329 domain-containing protein	NA	NA	NA	NA	NA
WP_169433271.1|34074_35736_-	DUF1302 domain-containing protein	NA	NA	NA	NA	NA
WP_169433272.1|35842_36274_+|transposase	IS200/IS605 family transposase	transposase	Q331U4	Clostridium_botulinum_C_phage	39.4	3.9e-20
WP_048512690.1|36405_38814_-	MMPL family transporter	NA	NA	NA	NA	NA
WP_169433273.1|38810_39902_-	glycosyl hydrolase	NA	NA	NA	NA	NA
WP_042919629.1|39988_41311_-	MFS transporter	NA	NA	NA	NA	NA
WP_169433274.1|41314_42595_-	serine/threonine protein phosphatase	NA	NA	NA	NA	NA
WP_042930316.1|43014_44076_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_009394380.1|44355_44955_-	methyl-accepting chemotaxis transducer	NA	A0A2H4J162	uncultured_Caudovirales_phage	37.1	1.3e-24
WP_079281431.1|44944_46249_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA	NA
WP_009394383.1|46256_47066_-	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	25.1	9.4e-15
WP_009394385.1|47062_47863_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.7	1.3e-16
WP_009394387.1|47859_48726_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_023047470.1|49672_50008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024718243.1|49994_50234_+	TIGR03758 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_024718244.1|50249_50627_+	TIGR03745 family integrating conjugative element membrane protein	NA	NA	NA	NA	NA
WP_024718245.1|50635_51037_+	TIGR03750 family conjugal transfer protein	NA	NA	NA	NA	NA
WP_023047517.1|51033_51672_+	TIGR03746 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_023047516.1|51671_52478_+	TIGR03749 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_023047515.1|52467_52611_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169433240.1|52646_53924_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	40.6	4.7e-85
WP_000098298.1|53936_54971_-	permease	NA	NA	NA	NA	NA
WP_000349485.1|55082_55397_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_169433275.1|55531_55750_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023093702.1|55764_56052_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023093701.1|56122_56344_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023093700.1|56343_57006_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
58400:58413	attR	ATCCTCGAGGTCGG	NA	NA	NA	NA
