The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP051751	Escherichia coli strain SCU-301 chromosome, complete genome	5054966	1207374	1214514	5054966		Escherichia_phage(83.33%)	6	NA	NA
WP_001278992.1|1207374_1208013_-	aldolase	NA	A0A077SK32	Escherichia_phage	74.5	1.8e-82
WP_000590408.1|1208009_1209272_-	3-oxo-tetronate kinase	NA	A0A077SLJ7	Escherichia_phage	61.4	2.2e-135
WP_000847988.1|1209268_1210177_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.5	1.5e-117
WP_001295181.1|1210372_1211140_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	56.7	2.5e-70
WP_096986967.1|1211190_1211847_-	protein-serine/threonine phosphatase	NA	A0A077SLQ6	Escherichia_phage	47.0	1.3e-51
WP_001272887.1|1211952_1214514_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.7	4.6e-31
>prophage 2
NZ_CP051751	Escherichia coli strain SCU-301 chromosome, complete genome	5054966	1848491	1857933	5054966		Enterobacteria_phage(85.71%)	10	NA	NA
WP_089583080.1|1848491_1849418_+	glycine betaine ABC transporter ATP binding protein YehX	NA	F2Y1V5	Organic_Lake_phycodnavirus	26.8	5.7e-08
WP_032171571.1|1849422_1850154_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA	NA
WP_001216963.1|1850134_1850242_-	protein YohO	NA	NA	NA	NA	NA
WP_052896128.1|1850301_1851033_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	99.5	9.7e-112
WP_001295431.1|1851254_1852940_+	two-component regulatory system sensor histidine kinase BtsS	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
WP_001308766.1|1852936_1853656_+	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_001295430.1|1853702_1854173_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	100.0	1.8e-82
WP_001296231.1|1854213_1854675_-	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	99.3	3.2e-76
WP_096986562.1|1854799_1856800_-	SWIM zinc finger family protein	NA	Q9EYF6	Enterobacteria_phage	95.7	0.0e+00
WP_096986561.1|1856796_1857933_-	VWA domain-containing protein	NA	Q9EYF7	Enterobacteria_phage	98.0	1.3e-163
>prophage 3
NZ_CP051751	Escherichia coli strain SCU-301 chromosome, complete genome	5054966	1949677	1955981	5054966		Enterobacteria_phage(50.0%)	6	NA	NA
WP_096986541.1|1949677_1951072_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	31.9	8.3e-19
WP_000183060.1|1951246_1952140_+	UTP--glucose-1-phosphate uridylyltransferase GalF	NA	A0A127AW70	Bacillus_phage	42.0	1.0e-46
WP_032084602.1|1952512_1953598_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	5.2e-101
WP_001023616.1|1953597_1954497_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.5	8.2e-28
WP_096986540.1|1954555_1955434_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.1	1.1e-106
WP_001610415.1|1955438_1955981_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	55.6	1.6e-47
>prophage 4
NZ_CP051751	Escherichia coli strain SCU-301 chromosome, complete genome	5054966	2413815	2458954	5054966	transposase,protease,lysis,integrase,terminase	Escherichia_phage(26.92%)	59	2421391:2421406	2455090:2455105
WP_075862245.1|2413815_2414637_-|protease	serine protease	protease	NA	NA	NA	NA
WP_000233090.1|2414736_2414820_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000743958.1|2414912_2415248_-	acid shock protein	NA	NA	NA	NA	NA
WP_000091840.1|2415644_2416898_-	MFS transporter	NA	NA	NA	NA	NA
WP_001019534.1|2417004_2417898_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000225257.1|2418032_2419253_+	DNA-binding transcriptional repressor Mlc	NA	NA	NA	NA	NA
WP_000919226.1|2419377_2420073_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA	NA
WP_075862253.1|2420025_2421318_-	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA	NA
2421391:2421406	attL	CTTTAAGAGATAAAAA	NA	NA	NA	NA
WP_075862244.1|2421475_2422090_-	Tat proofreading chaperone DmsD	NA	A0A077SLS7	Escherichia_phage	36.3	5.1e-29
WP_000526500.1|2422132_2422987_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA	NA
WP_000213028.1|2422988_2423606_-	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	59.6	9.5e-76
WP_075862252.1|2423616_2426040_-	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	48.8	9.8e-209
WP_061092693.1|2426100_2428527_-	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	49.1	5.0e-213
WP_001295396.1|2428725_2429031_-	DUF1161 domain-containing protein	NA	NA	NA	NA	NA
WP_032142801.1|2429138_2429849_+	YnfC family lipoprotein	NA	NA	NA	NA	NA
WP_001138584.1|2429851_2430412_-	spermidine N1-acetyltransferase	NA	NA	NA	NA	NA
WP_000705197.1|2430446_2430788_-	DUF1283 family protein	NA	NA	NA	NA	NA
WP_001304355.1|2430922_2431249_+	YnfA family protein	NA	A0A218MNG8	uncultured_virus	54.5	2.9e-23
WP_001295394.1|2431454_2432669_+	starvation-sensing protein RspA	NA	Q6A202	Oenococcus_phage	29.0	1.4e-46
WP_000836084.1|2432680_2433700_+	Zn-dependent oxidoreductase	NA	E3SJ82	Synechococcus_phage	25.9	7.4e-17
WP_001360138.1|2433757_2433868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876987.1|2433887_2435168_-|integrase	site-specific integrase	integrase	B6DZ48	Enterobacteria_phage	62.1	1.9e-155
WP_000005552.1|2435202_2435454_-	excisionase family protein	NA	S4TND0	Salmonella_phage	50.0	2.2e-15
WP_115440996.1|2435526_2437998_-	exonuclease	NA	A0A192Y6E0	Salmonella_phage	56.1	1.2e-57
WP_001083276.1|2438091_2438283_-|lysis	lysis protein YdfD	lysis	NA	NA	NA	NA
WP_000854559.1|2438279_2438468_-	cell division inhibition protein DicB	NA	NA	NA	NA	NA
WP_000344950.1|2438954_2439530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000379575.1|2439531_2439687_-	DUF1391 family protein	NA	M4QQ57	Salicola_phage	53.2	3.0e-07
WP_000381212.1|2439855_2440263_-	helix-turn-helix domain-containing protein	NA	I6PD69	Cronobacter_phage	51.9	7.2e-32
WP_000921596.1|2440343_2440571_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_000705355.1|2440554_2441076_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000054487.1|2441056_2442022_+	hypothetical protein	NA	U5P0A0	Shigella_phage	60.8	2.6e-56
WP_001151242.1|2442062_2442461_+	DUF977 family protein	NA	A0A0U2QQN3	Escherichia_phage	93.9	7.7e-63
WP_021523102.1|2442663_2443329_+	epoxyqueuosine reductase QueH	NA	NA	NA	NA	NA
WP_001265627.1|2443537_2444152_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000915483.1|2444154_2445177_+	DUF4868 domain-containing protein	NA	NA	NA	NA	NA
WP_089591175.1|2445660_2446974_+|transposase	ISNCY family transposase	transposase	NA	NA	NA	NA
WP_001301033.1|2447410_2447743_-	protein FlxA	NA	NA	NA	NA	NA
WP_001326990.1|2447945_2448251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000534858.1|2448275_2448515_+	type II toxin-antitoxin system antitoxin RelB	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	54.4	1.6e-18
WP_000323025.1|2448514_2448802_+	type II toxin-antitoxin system mRNA interferase RelE	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	66.0	1.4e-29
WP_000813254.1|2448873_2449029_+	type I toxin-antitoxin system toxin HokD	NA	A0A0U2QV81	Escherichia_phage	96.1	1.5e-17
WP_000980994.1|2449245_2449497_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012304870.1|2449563_2449842_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001265199.1|2449843_2450893_+	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	57.0	2.8e-112
WP_001047135.1|2450906_2451659_+	antitermination protein	NA	A0A192Y5X6	Salmonella_phage	92.8	7.1e-134
WP_120795389.1|2451936_2452026_-	Qin prophage; protein YnfS	NA	NA	NA	NA	NA
WP_000087756.1|2452080_2452293_-	cold shock-like protein CspF	NA	NA	NA	NA	NA
WP_000066484.1|2452593_2452809_+	cold shock-like protein CspB	NA	A0A1W6JNX5	Morganella_phage	76.5	3.4e-25
WP_000839590.1|2453562_2453778_+|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	94.4	1.1e-31
WP_000189916.1|2453782_2454094_+	YdfR family protein	NA	K7PGU6	Enterobacteria_phage	64.6	2.0e-26
WP_001092971.1|2454090_2454624_+	lysozyme	NA	K7PLY1	Enterobacteria_phage	93.2	6.4e-97
WP_001071769.1|2454620_2455118_+	DUF2514 domain-containing protein	NA	A0A291LBG9	Klebsiella_phage	29.5	2.9e-06
2455090:2455105	attR	CTTTAAGAGATAAAAA	NA	NA	NA	NA
WP_000066495.1|2455480_2455693_+	cold shock protein CspI	NA	A0A1W6JNX5	Morganella_phage	74.3	1.2e-22
WP_071524604.1|2455703_2455892_+	cold-shock protein	NA	NA	NA	NA	NA
WP_120795388.1|2455894_2455960_+	Qin prophage; protein YnfR	NA	NA	NA	NA	NA
WP_001309517.1|2456039_2456195_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169057824.1|2456366_2456546_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA	NA
WP_169057788.1|2458303_2458954_+|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	98.2	4.0e-93
>prophage 5
NZ_CP051751	Escherichia coli strain SCU-301 chromosome, complete genome	5054966	2463330	2485244	5054966	head,tail	Enterobacteria_phage(42.86%)	16	NA	NA
WP_001295978.1|2463330_2463663_+|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	99.1	3.8e-55
WP_000158905.1|2464783_2465182_+	DNA-packaging protein FI	NA	A0A0K2FIR1	Enterobacteria_phage	99.2	1.2e-63
WP_000753007.1|2465193_2465547_+|tail	tail attachment protein	tail	A0A0K2FJB7	Enterobacteria_phage	99.1	4.4e-62
WP_000975070.1|2465558_2466137_+|tail	phage tail protein	tail	A0A2R9YJK4	Escherichia_phage	100.0	2.7e-80
WP_069357285.1|2466133_2466529_+|tail	phage tail protein	tail	A0A0K2FIF4	Enterobacteria_phage	99.2	2.2e-70
WP_000459458.1|2467695_2468130_+|tail	phage tail assembly protein T	tail	A0A0K2FJB3	Enterobacteria_phage	99.2	1.5e-64
WP_000847332.1|2470681_2471011_+|tail	phage tail protein	tail	A0A2R9YJM0	Escherichia_phage	99.1	5.6e-59
WP_000290529.1|2476617_2478963_+|tail	prophage tail fiber N-terminal domain-containing protein	tail	A0A0E3M0V5	Enterobacteria_phage	45.4	9.5e-92
WP_115440930.1|2478959_2479241_+	hypothetical protein	NA	A0A1X7QHA1	Escherichia_phage	48.9	1.2e-17
WP_000235975.1|2479250_2479955_+	hypothetical protein	NA	A0A1X7QGH6	Escherichia_phage	62.3	5.4e-59
WP_000355603.1|2479965_2480259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000086527.1|2480486_2481077_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	38.8	1.6e-24
WP_000836768.1|2481392_2481626_-	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	88.3	1.1e-32
WP_120795384.1|2481694_2481808_-	Rac prophage; protein YnaM	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
WP_000347479.1|2482411_2483695_+	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_096986583.1|2483783_2485244_+	mannitol dehydrogenase family protein	NA	G8DCZ3	Micromonas_pusilla_virus	29.9	1.7e-43
>prophage 6
NZ_CP051751	Escherichia coli strain SCU-301 chromosome, complete genome	5054966	2878263	2922636	5054966	tail,portal,head,integrase,terminase,capsid,holin,tRNA	Enterobacteria_phage(45.65%)	57	2889854:2889868	2922534:2922548
WP_096987147.1|2878263_2880285_-|tail	prophage tail fiber N-terminal domain-containing protein	tail	A0A0E3M0V5	Enterobacteria_phage	72.3	7.2e-181
WP_096987146.1|2880343_2883826_-	host specificity protein J	NA	A0A291AWT4	Escherichia_phage	90.1	0.0e+00
WP_000847332.1|2885892_2886222_-|tail	phage tail protein	tail	A0A2R9YJM0	Escherichia_phage	99.1	5.6e-59
WP_169057792.1|2887015_2887387_-|tail	phage tail tape measure protein	tail	A0A0K2FI43	Enterobacteria_phage	95.8	1.5e-52
WP_001605279.1|2888757_2889192_-|tail	phage tail assembly protein T	tail	A0A0K2FJB3	Enterobacteria_phage	97.5	3.8e-63
WP_169057793.1|2889178_2889586_-|tail	phage minor tail protein G	tail	A0A0K2FIQ8	Enterobacteria_phage	93.2	2.0e-53
WP_024222982.1|2889601_2890342_-|tail	phage tail protein	tail	A0A2I6TC77	Escherichia_phage	98.8	3.3e-131
2889854:2889868	attL	GCCGGTTGCCGCCGT	NA	NA	NA	NA
WP_000683128.1|2890349_2890745_-|tail	tail protein	tail	A0A2R9YJI2	Escherichia_phage	99.2	6.5e-70
WP_024222984.1|2890741_2891320_-|tail	phage tail protein	tail	A0A2R9YJK4	Escherichia_phage	94.8	1.0e-79
WP_024222985.1|2891331_2891685_-|tail	tail attachment protein	tail	A0A0K2FJB7	Enterobacteria_phage	97.4	2.9e-61
WP_024222986.1|2891696_2892092_-	DNA-packaging protein FI	NA	A0A2R9YJP4	Escherichia_phage	92.4	8.2e-57
WP_169057794.1|2892133_2893159_-|capsid	major capsid protein	capsid	C6ZCY2	Enterobacteria_phage	95.6	2.1e-184
WP_053895198.1|2893214_2893547_-|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	90.0	3.7e-50
WP_169057795.1|2893556_2894888_-	S49 family peptidase	NA	A0A0K2FI53	Enterobacteria_phage	97.7	1.9e-230
WP_001349645.1|2894868_2896470_-|portal	phage portal protein	portal	A0A0K2FJC0	Enterobacteria_phage	99.6	3.5e-311
WP_053895199.1|2896466_2896673_-|tail	phage tail protein	tail	A0A2R9YJL2	Escherichia_phage	98.5	1.7e-29
WP_001027289.1|2896669_2898595_-|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	99.7	0.0e+00
WP_096987143.1|2898569_2899115_-	DNA-packaging protein	NA	A0A0K2FIG2	Enterobacteria_phage	97.8	8.9e-94
WP_096987142.1|2899482_2899851_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024223836.1|2899873_2900161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_126119126.1|2900268_2900808_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024223834.1|2901268_2901661_-	DUF2570 domain-containing protein	NA	S5FKR3	Shigella_phage	89.1	1.7e-54
WP_024223833.1|2901644_2902121_-	glycoside hydrolase family protein	NA	U5P0A9	Shigella_phage	94.9	4.7e-83
WP_000544528.1|2902107_2902413_-|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	87.6	7.0e-40
WP_024223832.1|2902641_2903445_+	DUF3800 domain-containing protein	NA	Q19UP3	Mannheimia_phage	47.9	4.3e-68
WP_024223831.1|2903666_2904356_-	antitermination protein	NA	I6PDF8	Cronobacter_phage	49.8	5.3e-59
WP_001568558.1|2904352_2904493_-	YlcG family protein	NA	K7PHH3	Enterobacteria_phage	71.1	1.3e-09
WP_032217957.1|2904489_2904852_-	RusA family crossover junction endodeoxyribonuclease	NA	K7PM48	Enterobacteria_phage	94.0	2.3e-58
WP_000774477.1|2904848_2905139_-	DUF1364 domain-containing protein	NA	K7PGZ6	Enterobacteria_phage	96.9	6.0e-49
WP_000224914.1|2905131_2905302_-	hypothetical protein	NA	K7P7K0	Enterobacteria_phage	69.8	2.4e-13
WP_001053011.1|2905301_2905757_-	DNA base-flipping protein YbcN	NA	I6PD71	Cronobacter_phage	66.9	1.6e-59
WP_072093903.1|2905753_2905855_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001535299.1|2906204_2907248_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000709100.1|2907597_2909124_-	recombinase family protein	NA	Q3HQV4	Burkholderia_phage	30.8	3.6e-31
WP_001566662.1|2909181_2909304_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001070442.1|2909380_2909713_-	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA	NA
WP_000145905.1|2909780_2910083_-	hypothetical protein	NA	M1FPD5	Enterobacteria_phage	97.8	4.7e-44
WP_000788793.1|2910079_2910781_-	Replication protein 14	NA	M1FJ72	Enterobacteria_phage	97.4	2.7e-127
WP_001435464.1|2910777_2911707_-	replication protein	NA	A0A0M5M7Y1	Salmonella_phage	64.1	6.1e-111
WP_001182903.1|2911793_2912333_-	hypothetical protein	NA	M9NZI6	Enterobacteria_phage	66.1	1.2e-61
WP_001067458.1|2912402_2912633_-	helix-turn-helix domain-containing protein	NA	A0A2H4FNF3	Salmonella_phage	68.0	1.5e-21
WP_096987112.1|2912671_2913427_+	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	74.6	2.3e-92
WP_000233576.1|2914022_2914229_+	phage encoded cell division inhibitor protein	NA	K7P6H3	Enterobacteria_phage	85.3	3.2e-28
WP_000995418.1|2914304_2914601_+	host-nuclease inhibitor protein Gam	NA	A0A1I9LJN1	Stx_converting_phage	98.0	8.9e-48
WP_000100847.1|2914606_2915392_+	phage recombination protein Bet	NA	A0A1I9LJN0	Stx_converting_phage	100.0	6.3e-149
WP_000186798.1|2915388_2916069_+	YqaJ viral recombinase family protein	NA	B6DZ61	Enterobacteria_phage	98.2	1.3e-131
WP_000149539.1|2916065_2916248_+	DUF1317 domain-containing protein	NA	A0A0N7CHV0	Escherichia_phage	96.7	6.3e-28
WP_096987111.1|2916220_2916412_+	DUF1382 family protein	NA	A0A0P0ZC67	Stx2-converting_phage	96.8	1.4e-25
WP_077815074.1|2916422_2916704_+	cell division protein ZapA	NA	A0A0P0ZE02	Stx2-converting_phage	96.8	3.6e-46
WP_020240778.1|2916802_2916988_+	TraR/DksA family transcriptional regulator	NA	A0A0N7C211	Escherichia_phage	98.4	2.2e-28
WP_000488406.1|2917068_2917308_+	DUF4222 domain-containing protein	NA	M1FPC8	Enterobacteria_phage	94.9	3.9e-38
WP_000088653.1|2917447_2917684_+	excisionase	NA	NA	NA	NA	NA
WP_044706132.1|2917673_2918816_+|integrase	phage integrase Arm DNA-binding domain-containing protein	integrase	Q77Z02	Phage_21	99.4	1.1e-205
WP_000444487.1|2918929_2920180_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	100.0	3.8e-23
WP_096943990.1|2920351_2921005_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
WP_000476093.1|2921014_2921476_+	phosphatase NudJ	NA	NA	NA	NA	NA
WP_094029791.1|2921529_2922636_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
2922534:2922548	attR	GCCGGTTGCCGCCGT	NA	NA	NA	NA
>prophage 7
NZ_CP051751	Escherichia coli strain SCU-301 chromosome, complete genome	5054966	3051670	3108459	5054966	tail,protease,lysis,integrase,plate,terminase,capsid,holin	Enterobacteria_phage(33.33%)	86	3047780:3047794	3092973:3092987
3047780:3047794	attL	AACTGCGCGAACTGG	NA	NA	NA	NA
WP_169057799.1|3051670_3052039_-	recombinase family protein	NA	M1T2R9	Escherichia_phage	93.7	7.5e-36
WP_097769190.1|3052069_3052606_+|tail	tail fiber protein	tail	A0A0F7LCR3	Escherichia_phage	59.7	4.0e-54
WP_137583726.1|3052605_3053208_+|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	90.0	1.3e-98
WP_042096881.1|3053179_3053620_-|tail	tail fiber assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	71.0	5.6e-54
WP_137583727.1|3053641_3054331_-	hypothetical protein	NA	A0A0M3ULD8	Salmonella_phage	70.0	3.7e-28
WP_000049950.1|3054330_3055011_-	DUF2612 domain-containing protein	NA	A0A0M5M1K4	Salmonella_phage	78.8	2.6e-103
WP_032085005.1|3055007_3056207_-|plate	baseplate J/gp47 family protein	plate	A0A0M4RD32	Salmonella_phage	83.1	1.8e-184
WP_001270634.1|3056206_3056560_-	hypothetical protein	NA	A0A0M4R339	Salmonella_phage	90.6	3.1e-55
WP_053275921.1|3056559_3057312_-	translation initiation factor IF-2	NA	A0A0M5M1K7	Salmonella_phage	66.7	2.0e-88
WP_096938443.1|3057374_3057746_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169057800.1|3057726_3058503_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169057801.1|3058562_3058895_-	hypothetical protein	NA	A0A0M4RTY3	Salmonella_phage	70.0	2.9e-23
WP_000081732.1|3058894_3059959_-	hypothetical protein	NA	A0A0M4QX01	Salmonella_phage	81.1	3.2e-156
WP_000155119.1|3059961_3060264_-	hypothetical protein	NA	A0A0M4R5B7	Salmonella_phage	92.0	2.2e-49
WP_001349561.1|3060263_3060851_-	hypothetical protein	NA	A0A0M3ULD5	Salmonella_phage	89.1	3.1e-84
WP_169057802.1|3060850_3062839_-	lytic transglycosylase	NA	A0A0M4REK7	Salmonella_phage	74.2	9.6e-271
WP_000393961.1|3063016_3063469_-	hypothetical protein	NA	A0A0M4S6U8	Salmonella_phage	72.0	1.8e-55
WP_000109249.1|3063472_3063913_-	DUF3277 family protein	NA	A0A2H4J619	uncultured_Caudovirales_phage	75.3	7.0e-57
WP_089582184.1|3063923_3065069_-	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	73.5	5.2e-160
WP_137583742.1|3065072_3065636_-	hypothetical protein	NA	A0A0M4R331	Salmonella_phage	75.7	1.3e-79
WP_042106243.1|3065610_3066000_-	hypothetical protein	NA	A0A0M3ULK0	Salmonella_phage	95.3	1.2e-65
WP_111950872.1|3065986_3066541_-	hypothetical protein	NA	A0A0M4S631	Salmonella_phage	72.8	6.5e-68
WP_021572529.1|3066537_3066945_-	DUF4054 domain-containing protein	NA	A0A0M5M3S2	Salmonella_phage	94.8	9.7e-69
WP_164965922.1|3066943_3067177_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000627482.1|3067173_3068115_-	DUF2184 domain-containing protein	NA	A0A0M3ULD3	Salmonella_phage	86.9	6.3e-156
WP_042093528.1|3068126_3068633_-	hypothetical protein	NA	A0A0M4QWZ6	Salmonella_phage	79.9	3.7e-70
WP_042093526.1|3068636_3069857_-	DUF2213 domain-containing protein	NA	A0A0M4R5A6	Salmonella_phage	89.8	3.6e-204
WP_097485962.1|3069871_3070606_-|capsid	minor capsid protein	capsid	A0A0M4REK0	Salmonella_phage	87.6	5.6e-99
WP_097485963.1|3070496_3071963_-	DUF1073 domain-containing protein	NA	A0A0M4S6U1	Salmonella_phage	91.4	2.5e-260
WP_169057803.1|3071962_3073585_-	TerL protein	NA	A0A0M5M1R6	Salmonella_phage	95.4	0.0e+00
WP_001218989.1|3073587_3074139_-|terminase	terminase small subunit	terminase	G0ZND3	Cronobacter_phage	70.3	1.4e-67
WP_000097127.1|3074159_3074591_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001139681.1|3074893_3075046_-	hypothetical protein	NA	K7PKL2	Enterobacteria_phage	96.0	4.7e-21
WP_169057804.1|3075033_3075471_-|lysis	lysis protein	lysis	Q716B4	Shigella_phage	95.9	3.6e-69
WP_024044720.1|3075467_3075965_-	lysozyme RrrD	NA	A5LH83	Enterobacteria_phage	99.4	8.4e-91
WP_000839572.1|3075964_3076180_-|holin	class II holin family protein	holin	M1FN85	Enterobacteria_phage	98.6	5.3e-34
WP_000512806.1|3076545_3077034_-	late gene antiterminator protein	NA	M1FPN0	Enterobacteria_phage	100.0	5.3e-90
WP_001028864.1|3077024_3077696_-	serine/threonine protein phosphatase	NA	Q5TJL8	Enterobacteria_phage	96.9	1.6e-129
WP_024174867.1|3077692_3078304_-	recombination protein NinG	NA	K7PHM2	Enterobacterial_phage	99.5	1.8e-98
WP_000566865.1|3078296_3078467_-	protein ninF	NA	K7PMD9	Enterobacterial_phage	98.2	5.5e-26
WP_001254257.1|3078463_3078646_-	NinE family protein	NA	A0A0P0ZC71	Stx2-converting_phage	100.0	4.3e-29
WP_169057805.1|3078642_3079170_-	phage N-6-adenine-methyltransferase	NA	K7PMG2	Enterobacteria_phage	98.9	1.0e-99
WP_000736904.1|3079166_3079607_-	recombination protein NinB	NA	A5VW91	Enterobacteria_phage	100.0	7.0e-81
WP_169057806.1|3079680_3079971_-	protein ren	NA	O48423	Enterobacteria_phage	97.9	4.8e-46
WP_000788878.1|3079967_3080669_-	Replication protein 14	NA	K7P6G2	Enterobacteria_phage	99.6	1.7e-129
WP_000185501.1|3080665_3081565_-	replication protein	NA	A0A0K2FJ31	Enterobacteria_phage	99.7	3.2e-173
WP_001177650.1|3081599_3081878_-	transcriptional regulator	NA	K7P7A2	Enterobacteria_phage	100.0	1.6e-43
WP_000276886.1|3081986_3082172_-	helix-turn-helix domain-containing protein	NA	A5VW97	Enterobacteria_phage	100.0	1.6e-26
WP_001095981.1|3082252_3082903_+	LexA family transcriptional regulator	NA	K7PM82	Enterobacteria_phage	98.6	4.1e-122
WP_001358311.1|3083215_3083488_+	hypothetical protein	NA	K7PH69	Enterobacterial_phage	96.7	4.0e-26
WP_001066173.1|3083504_3084086_-	super-infection exclusion protein B	NA	K7P6T7	Enterobacteria_phage	92.2	1.5e-91
WP_032303759.1|3084299_3084500_+	Restriction inhibitor protein ral	NA	A5VWA0	Enterobacteria_phage	97.0	4.6e-32
WP_024231983.1|3084682_3085051_+	DUF2528 family protein	NA	M1FPD2	Enterobacteria_phage	98.4	1.7e-64
WP_001198861.1|3085123_3085288_+|protease	protease FtsH-inhibitory lysogeny factor CIII	protease	Q776Q5	Enterobacteria_phage	100.0	1.1e-26
WP_001702774.1|3085256_3085421_+	host cell division inhibitory peptide Kil	NA	A0A0P0ZC96	Stx2-converting_phage	96.3	1.0e-21
WP_000995441.1|3085474_3085771_+	host-nuclease inhibitor protein Gam	NA	A0A1I9LJN1	Stx_converting_phage	99.0	1.1e-48
WP_000100847.1|3085776_3086562_+	phage recombination protein Bet	NA	A0A1I9LJN0	Stx_converting_phage	100.0	6.3e-149
WP_000186798.1|3086558_3087239_+	YqaJ viral recombinase family protein	NA	B6DZ61	Enterobacteria_phage	98.2	1.3e-131
WP_000149544.1|3087235_3087418_+	DUF1317 domain-containing protein	NA	A0A1U8QQC1	Enterobacteria_phage	96.7	6.9e-27
WP_000548522.1|3087390_3087582_+	DUF1382 family protein	NA	A0A0P0ZC67	Stx2-converting_phage	96.8	6.2e-26
WP_169057807.1|3087592_3087874_+	hypothetical protein	NA	A0A0P0ZE02	Stx2-converting_phage	97.8	1.2e-46
WP_000763378.1|3087972_3088194_+	TraR/DksA family transcriptional regulator	NA	A0A1I9LJM6	Stx_converting_phage	97.3	8.4e-35
WP_140436908.1|3088404_3089007_-	hypothetical protein	NA	NA	NA	NA	NA
WP_115441793.1|3089219_3090020_+	hypothetical protein	NA	K7P7Q8	Enterobacteria_phage	98.5	1.3e-157
WP_000545737.1|3090078_3090246_+	hypothetical protein	NA	A5VWB7	Enterobacteria_phage	100.0	9.8e-28
WP_001281197.1|3090273_3090618_+	hypothetical protein	NA	K7PJY7	Enterobacterial_phage	99.1	2.0e-59
WP_001303849.1|3090724_3090943_+	excisionase	NA	Q77WA4	Escherichia_phage	100.0	3.7e-35
WP_169057808.1|3090920_3091994_+|integrase	tyrosine-type recombinase/integrase	integrase	Q9G075	Enterobacteria_phage	98.3	2.2e-197
WP_106418129.1|3092088_3094821_+	TMAO reductase system sensor histidine kinase/response regulator TorS	NA	A0A1V0SGX0	Hokovirus	32.5	2.0e-37
3092973:3092987	attR	CCAGTTCGCGCAGTT	NA	NA	NA	NA
WP_096986469.1|3094903_3095977_+	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_001019197.1|3096025_3096199_-	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA	NA
WP_001323678.1|3096188_3096419_-	protein YmcE	NA	NA	NA	NA	NA
WP_071524879.1|3096393_3096582_-	cold-shock protein	NA	NA	NA	NA	NA
WP_000066490.1|3096592_3096805_-	cold shock protein CspG	NA	A0A1W6JNX5	Morganella_phage	71.4	7.8e-22
WP_000087763.1|3097090_3097303_+	cold shock-like protein CspH	NA	NA	NA	NA	NA
WP_096986491.1|3097290_3098601_-	bifunctional acid phosphatase/4-phytase	NA	NA	NA	NA	NA
WP_000270305.1|3098680_3098773_-	cytochrome bd-II oxidase subunit CbdX	NA	NA	NA	NA	NA
WP_000460801.1|3098785_3099922_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_000263555.1|3099933_3101478_-	cytochrome bd-II oxidase subunit 1	NA	NA	NA	NA	NA
WP_000004894.1|3101611_3102469_-	hydrogenase expression/formation protein	NA	NA	NA	NA	NA
WP_000063961.1|3102465_3102864_-	hydrogenase-1 operon protein HyaE	NA	NA	NA	NA	NA
WP_022645484.1|3102860_3103448_-|protease	hydrogenase 1 maturation protease	protease	NA	NA	NA	NA
WP_001186424.1|3103444_3104152_-	Ni/Fe-hydrogenase b-type cytochrome subunit	NA	NA	NA	NA	NA
WP_000107384.1|3104170_3105964_-	Ni/Fe-hydrogenase large subunit	NA	NA	NA	NA	NA
WP_001058323.1|3105960_3107079_-	hydrogenase 1 small subunit	NA	NA	NA	NA	NA
WP_000375136.1|3107799_3108459_+|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	55.3	4.0e-48
>prophage 8
NZ_CP051751	Escherichia coli strain SCU-301 chromosome, complete genome	5054966	3896010	3970109	5054966	protease,transposase,tRNA,plate	Bradyrhizobium_phage(14.29%)	56	NA	NA
WP_169057813.1|3896010_3897147_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_097291528.1|3897439_3897649_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001142958.1|3904436_3904955_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_096944962.1|3905651_3906152_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_000123970.1|3906186_3906411_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022645216.1|3906461_3907937_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_022645215.1|3907943_3908357_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_096987213.1|3908360_3910211_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_063815230.1|3910174_3911257_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_001113710.1|3911281_3912562_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_001080149.1|3912558_3913083_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_022645212.1|3913085_3914417_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_096987212.1|3914421_3915183_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_022645209.1|3917946_3918690_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
WP_022645208.1|3918694_3920110_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_123000017.1|3920218_3923653_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_096987210.1|3923663_3925016_+	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_096987258.1|3925039_3925522_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_000908052.1|3925565_3926480_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001236645.1|3926489_3926969_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096987257.1|3927105_3927891_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001366128.1|3928427_3929159_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	38.6	7.6e-40
WP_000917883.1|3929223_3929691_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	58.7	1.0e-50
WP_001295200.1|3929687_3930410_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_096987256.1|3930443_3931199_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_000644685.1|3931270_3932629_+	murein transglycosylase D	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	36.0	5.8e-09
WP_096987255.1|3932676_3933447_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_001230983.1|3933523_3934324_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_169057814.1|3934564_3935479_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_096987254.1|3935475_3936279_-	2,5-didehydrogluconate reductase DkgB	NA	A0A1V0SDE7	Indivirus	35.7	1.3e-37
WP_001140175.1|3942014_3942590_-	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_000593994.1|3942777_3943809_+	methionine ABC transporter ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	40.2	7.2e-36
WP_001294600.1|3943801_3944455_+	methionine ABC transporter permease MetI	NA	NA	NA	NA	NA
WP_000874224.1|3944494_3945310_+	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA	NA
WP_001202329.1|3945427_3945832_+	Rcs stress response system protein RcsF	NA	NA	NA	NA	NA
WP_000094011.1|3945828_3946536_+|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	tRNA	NA	NA	NA	NA
WP_001260712.1|3946647_3948366_+|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_096986638.1|3948418_3949243_+	YaeF family permuted papain-like enzyme	NA	NA	NA	NA	NA
WP_001601560.1|3950676_3951387_-	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA	NA
WP_000635534.1|3951400_3951823_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_001540755.1|3951819_3952365_-	YaeQ family protein	NA	NA	NA	NA	NA
WP_000417058.1|3952530_3952731_+	YaeP family protein	NA	NA	NA	NA	NA
WP_000062311.1|3952717_3952978_+	Rho-binding antiterminator	NA	NA	NA	NA	NA
WP_096986639.1|3953011_3954325_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_000901098.1|3954389_3954779_-	VOC family protein	NA	NA	NA	NA	NA
WP_097291328.1|3954835_3956977_-	lysine decarboxylase LdcC	NA	NA	NA	NA	NA
WP_000055741.1|3957074_3958034_-	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA	NA
WP_001294757.1|3958046_3961529_-	DNA polymerase III subunit alpha	NA	Q8W6C3	Saccharomonospora_phage	36.9	2.2e-209
WP_000569424.1|3961565_3962162_-	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	40.0	3.9e-26
WP_096986641.1|3962158_3963307_-	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_000565966.1|3963306_3964095_-	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_000210739.1|3964098_3964554_-	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_064524990.1|3964658_3965684_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_000758958.1|3965687_3966173_-	molecular chaperone Skp	NA	NA	NA	NA	NA
WP_001240896.1|3966294_3968727_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_024223346.1|3968756_3970109_-|protease	sigma E protease regulator RseP	protease	NA	NA	NA	NA
