The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP051714	Escherichia coli strain SCU-122 chromosome, complete genome	4911026	78264	87007	4911026	integrase	Morganella_phage(50.0%)	12	84638:84650	87116:87128
WP_001332287.1|78264_80616_-	toprim domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	48.2	1.7e-72
WP_001058741.1|80628_81231_-	hypothetical protein	NA	Q8W653	Enterobacteria_phage	33.3	2.6e-22
WP_000181940.1|81223_81445_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001024678.1|81441_81705_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001065741.1|81701_81896_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000613400.1|81888_82956_-	ash family protein	NA	A0A1C9IHV9	Salmonella_phage	38.4	8.6e-16
WP_000042975.1|82952_83132_-	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
WP_001019373.1|83124_83958_-	antA/AntB antirepressor family protein	NA	G9L6G1	Escherichia_phage	46.7	9.0e-21
WP_000412532.1|83970_84402_-	hypothetical protein	NA	A0A1W6JPH9	Morganella_phage	50.3	1.8e-28
WP_001363069.1|84401_84620_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
84638:84650	attL	TGATAGCTCATGA	NA	NA	NA	NA
WP_001059729.1|85091_85742_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001351217.1|85738_87007_-|integrase	site-specific integrase	integrase	A0A1W6JPG6	Morganella_phage	78.3	5.1e-193
87116:87128	attR	TGATAGCTCATGA	NA	NA	NA	NA
>prophage 2
NZ_CP051714	Escherichia coli strain SCU-122 chromosome, complete genome	4911026	1148480	1155620	4911026		Escherichia_phage(83.33%)	6	NA	NA
WP_001279003.1|1148480_1149119_-	aldolase	NA	A0A077SK32	Escherichia_phage	74.5	1.4e-82
WP_000590420.1|1149115_1150378_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	61.4	2.2e-135
WP_000847997.1|1150374_1151283_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.5	1.5e-117
WP_001296319.1|1151478_1152246_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	57.4	9.7e-70
WP_001141302.1|1152296_1152953_-	protein-serine/threonine phosphatase	NA	A0A077SLQ6	Escherichia_phage	46.6	1.1e-50
WP_000103864.1|1153058_1155620_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.8	2.0e-31
>prophage 3
NZ_CP051714	Escherichia coli strain SCU-122 chromosome, complete genome	4911026	1231279	1313343	4911026	protease,tail,holin,head,portal,plate,lysis,terminase,capsid,tRNA	Shigella_phage(43.4%)	90	NA	NA
WP_000531794.1|1231279_1232452_-	DUF3596 domain-containing protein	NA	I6PDJ1	Cronobacter_phage	67.5	3.3e-146
WP_001331174.1|1232412_1232619_-	hypothetical protein	NA	I6PBM8	Cronobacter_phage	70.3	6.9e-23
WP_001075212.1|1232660_1233527_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000008234.1|1233635_1234160_-	5'-deoxynucleotidase	NA	S5MW55	Escherichia_phage	98.3	5.4e-96
WP_000081287.1|1234287_1235112_-	DUF2303 family protein	NA	U5P439	Shigella_phage	100.0	6.0e-150
WP_000135691.1|1235177_1235540_-	hypothetical protein	NA	Q8SBF8	Shigella_phage	98.3	1.2e-59
WP_000500990.1|1236008_1236521_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000848748.1|1236723_1237398_-	LexA family transcriptional repressor	NA	U5P0T5	Shigella_phage	100.0	1.2e-132
WP_000649477.1|1237488_1237689_+	helix-turn-helix domain-containing protein	NA	U5P445	Shigella_phage	100.0	7.9e-32
WP_000515830.1|1237732_1238284_+	protein YmfL	NA	S5FXP0	Shigella_phage	98.4	2.2e-100
WP_001250269.1|1238459_1238639_+	DUF4222 domain-containing protein	NA	S5M7S5	Escherichia_phage	68.5	7.8e-15
WP_000104933.1|1238628_1239570_+	helix-turn-helix domain-containing protein	NA	U5P0A0	Shigella_phage	98.4	1.3e-153
WP_001332382.1|1239566_1240061_+	PerC family transcriptional regulator	NA	A0A0P0ZCF0	Stx2-converting_phage	99.4	1.9e-87
WP_001332383.1|1240060_1240714_+	phage N-6-adenine-methyltransferase	NA	A0A0P0ZCC0	Stx2-converting_phage	99.1	1.6e-126
WP_000210172.1|1240710_1241037_+	LexA family transcriptional regulator	NA	A0A0N7KZF7	Stx2-converting_phage	99.1	2.7e-53
WP_000767113.1|1241033_1241423_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A0P0ZD39	Stx2-converting_phage	100.0	7.1e-69
WP_001061411.1|1241442_1242240_+	KilA-N domain-containing protein	NA	A0A0P0ZCS0	Stx2-converting_phage	99.2	5.8e-150
WP_001351089.1|1242247_1243237_+	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	97.9	1.1e-190
WP_001047143.1|1243250_1244003_+	antitermination protein	NA	Q8SBE4	Shigella_phage	98.0	1.1e-134
WP_000606308.1|1244188_1244524_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000544527.1|1244675_1244981_+|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	86.6	1.6e-39
WP_001180490.1|1244967_1245444_+	glycoside hydrolase family protein	NA	K7PKV2	Enterobacteria_phage	93.0	2.8e-83
WP_000092331.1|1245440_1245878_+|lysis	lysis protein	lysis	K7P710	Enterobacteria_phage	92.3	5.3e-65
WP_001332386.1|1245948_1246200_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000026993.1|1246306_1246747_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001135216.1|1246849_1247200_+	HNH endonuclease	NA	M1FQV2	Enterobacteria_phage	95.7	3.4e-62
WP_000929172.1|1247325_1247820_+|terminase	phage terminase small subunit P27 family	terminase	A0A1B3B2F4	Salmonella_phage	99.4	8.6e-88
WP_072011717.1|1248053_1249550_+|terminase	terminase large subunit	terminase	A0A1C9IIA1	Salmonella_phage	99.8	7.4e-300
WP_000605604.1|1249561_1249744_+	hypothetical protein	NA	M1FJ83	Enterobacteria_phage	100.0	1.7e-25
WP_000466267.1|1249743_1250985_+|portal	phage portal protein	portal	U5P411	Shigella_phage	99.3	6.5e-241
WP_001193631.1|1250962_1251613_+|head,protease	HK97 family phage prohead protease	head,protease	U5P4H2	Shigella_phage	100.0	2.5e-119
WP_000257492.1|1251627_1252833_+|capsid	phage major capsid protein	capsid	U5P0G9	Shigella_phage	99.5	9.1e-224
WP_000601360.1|1252882_1253083_+	hypothetical protein	NA	S5FNU1	Shigella_phage	97.0	3.8e-26
WP_000927711.1|1253085_1253409_+|head,tail	phage gp6-like head-tail connector protein	head,tail	U5P072	Shigella_phage	99.1	1.1e-56
WP_000702385.1|1253405_1253816_+|head	phage head closure protein	head	M1FJ87	Enterobacteria_phage	96.3	1.1e-72
WP_000213503.1|1253790_1254297_+	hypothetical protein	NA	M1FPE2	Enterobacteria_phage	99.4	3.2e-90
WP_000779291.1|1254293_1254854_+	hypothetical protein	NA	S5FM61	Shigella_phage	98.9	1.5e-104
WP_000497751.1|1254862_1255033_+	DUF2635 domain-containing protein	NA	Q8SBH3	Shigella_phage	100.0	9.3e-26
WP_000155718.1|1255016_1256513_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	M1FN90	Enterobacteria_phage	95.6	4.3e-263
WP_000090998.1|1256512_1256869_+	hypothetical protein	NA	U5P076	Shigella_phage	100.0	5.3e-63
WP_000661051.1|1256868_1257138_+|tail	phage tail assembly protein	tail	M1FPE4	Enterobacteria_phage	98.9	6.0e-43
WP_000807182.1|1257279_1259115_+|tail	phage tail tape measure protein	tail	Q8SBG9	Shigella_phage	98.4	7.7e-307
WP_001350765.1|1259175_1260504_+	DNA circularization N-terminal domain-containing protein	NA	Q8SBG8	Shigella_phage	98.6	7.2e-246
WP_000999498.1|1260500_1261580_+|plate	baseplate protein	plate	Q8SBG7	Shigella_phage	99.4	1.5e-206
WP_000103707.1|1261579_1262128_+|plate	phage baseplate assembly protein	plate	Q8SBG6	Shigella_phage	98.9	5.6e-96
WP_000424731.1|1262127_1262553_+	phage GP46 family protein	NA	U5P0R9	Shigella_phage	98.6	7.4e-80
WP_000785328.1|1262539_1263598_+|plate	baseplate J/gp47 family protein	plate	U5P424	Shigella_phage	97.7	2.6e-198
WP_000539246.1|1263588_1264173_+	YmfQ family protein	NA	O22003	Shigella_phage	98.5	1.0e-111
WP_000554717.1|1264176_1264920_+|tail	tail fiber protein	tail	O22004	Shigella_phage	91.7	1.1e-49
WP_000356380.1|1264919_1265522_+|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	86.0	3.4e-94
WP_001089535.1|1265493_1265937_-|tail	tail assembly chaperone	tail	A0A0F7LDZ0	Escherichia_phage	50.3	4.8e-37
WP_001115559.1|1265939_1266431_-	hypothetical protein	NA	F1BUP1	Erwinia_phage	35.3	4.8e-06
WP_000834402.1|1266684_1268574_-	DUF262 domain-containing protein	NA	NA	NA	NA	NA
WP_000353910.1|1269625_1270399_+	hypothetical protein	NA	G9IA57	Pseudomonas_phage	39.2	3.6e-40
WP_000174562.1|1270609_1270903_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000183405.1|1270990_1271779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000162574.1|1272935_1273418_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	46.8	4.0e-29
WP_000600193.1|1273549_1274026_+	type II toxin-antitoxin system toxin RatA	NA	NA	NA	NA	NA
WP_001117834.1|1274015_1274306_+	RnfH family protein	NA	NA	NA	NA	NA
WP_001203437.1|1274367_1274709_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_000880938.1|1274857_1276519_-	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001059176.1|1276604_1277483_-	NAD(+) kinase	NA	NA	NA	NA	NA
WP_001332400.1|1277605_1278199_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_010723175.1|1278253_1279540_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_001338897.1|1279560_1280352_-	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_000460035.1|1280518_1281880_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_000256450.1|1282016_1282265_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_000043335.1|1282283_1282832_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_000264777.1|1282862_1283630_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_000065253.1|1283671_1284019_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_000589793.1|1284095_1284578_-	OmpA family protein	NA	NA	NA	NA	NA
WP_000969016.1|1284593_1285820_-	diguanylate cyclase DgcN	NA	NA	NA	NA	NA
WP_001212400.1|1285809_1286328_-	YfiR family protein	NA	NA	NA	NA	NA
WP_001296308.1|1286476_1286842_-	DUF2799 domain-containing protein	NA	NA	NA	NA	NA
WP_001168025.1|1287051_1288122_+	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.2	4.0e-90
WP_000225230.1|1288132_1289254_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_000200106.1|1289296_1290457_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
WP_001386991.1|1290555_1290603_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000178456.1|1290706_1291048_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_000197686.1|1291317_1292055_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_000079096.1|1292189_1293170_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
WP_000040118.1|1293166_1293898_+	polyphenol oxidase	NA	NA	NA	NA	NA
WP_001350770.1|1294027_1296601_+	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.2	5.8e-127
WP_001298619.1|1305087_1306386_+	alpha-ketoglutarate permease	NA	Q6JIH2	Burkholderia_virus	31.7	4.8e-45
WP_001370843.1|1306382_1306706_-	YfiM family lipoprotein	NA	NA	NA	NA	NA
WP_000949265.1|1306751_1308107_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_000082937.1|1308220_1310881_-	protein lysine acetyltransferase	NA	NA	NA	NA	NA
WP_001298618.1|1310912_1311611_-	DTW domain-containing protein	NA	NA	NA	NA	NA
WP_001098726.1|1311679_1312099_-	thioredoxin TrxC	NA	A0A0K2FIM3	Achromobacter_phage	38.5	2.8e-15
WP_000997387.1|1312305_1313343_+|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
>prophage 4
NZ_CP051714	Escherichia coli strain SCU-122 chromosome, complete genome	4911026	1773280	1781592	4911026		Enterobacteria_phage(83.33%)	9	NA	NA
WP_000569345.1|1773280_1774207_+	glycine betaine ABC transporter ATP binding protein YehX	NA	F2Y1V5	Organic_Lake_phycodnavirus	26.8	5.7e-08
WP_000783132.1|1774211_1774943_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA	NA
WP_001216963.1|1774923_1775031_-	protein YohO	NA	NA	NA	NA	NA
WP_001240394.1|1775090_1775822_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	98.5	3.1e-110
WP_001295431.1|1776043_1777729_+	two-component regulatory system sensor histidine kinase BtsS	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
WP_000598641.1|1777725_1778445_+	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_001295430.1|1778491_1778962_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	100.0	1.8e-82
WP_001296231.1|1779002_1779464_-	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	99.3	3.2e-76
WP_001332210.1|1779588_1781592_-	SWIM zinc finger family protein	NA	Q9EYF6	Enterobacteria_phage	95.4	0.0e+00
>prophage 5
NZ_CP051714	Escherichia coli strain SCU-122 chromosome, complete genome	4911026	1878342	1887058	4911026		Enterobacteria_phage(42.86%)	8	NA	NA
WP_001115981.1|1878342_1879737_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	33.5	1.3e-19
WP_001557327.1|1879911_1880805_+	UTP--glucose-1-phosphate uridylyltransferase GalF	NA	A0A127AW70	Bacillus_phage	42.0	7.9e-47
WP_000699418.1|1881177_1882263_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	54.2	1.4e-101
WP_001023627.1|1882262_1883162_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	35.6	1.5e-29
WP_000857549.1|1883219_1884098_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.1	1.5e-106
WP_001100791.1|1884102_1884651_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	56.1	4.2e-51
WP_001362820.1|1884682_1885921_+	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_000735124.1|1885930_1887058_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAI1	Catovirus	30.4	5.3e-32
>prophage 6
NZ_CP051714	Escherichia coli strain SCU-122 chromosome, complete genome	4911026	2693219	2755845	4911026	protease,tail,holin,head,integrase,portal,lysis,terminase,capsid	Escherichia_phage(36.0%)	74	2697943:2697958	2763211:2763226
WP_000422062.1|2693219_2694269_-|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	31.5	1.3e-21
WP_000559260.1|2694488_2695247_+	YciK family oxidoreductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	23.4	7.5e-06
WP_001278741.1|2695243_2695834_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_001291206.1|2695873_2696749_-	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA	NA
WP_001350892.1|2696961_2698857_-	DUF2207 domain-containing protein	NA	NA	NA	NA	NA
2697943:2697958	attL	AAAACCTTTATCGTCG	NA	NA	NA	NA
WP_001295575.1|2698884_2699505_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_001285667.1|2699501_2700383_-	5'-3' exoribonuclease	NA	NA	NA	NA	NA
WP_001700591.1|2700520_2700565_+	trp operon leader peptide	NA	NA	NA	NA	NA
WP_001194639.1|2700656_2702219_+	anthranilate synthase component I	NA	NA	NA	NA	NA
WP_000763524.1|2702218_2703814_+	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	NA	A0A0N7IRD9	Acinetobacter_phage	38.5	1.7e-52
WP_001195306.1|2703817_2705176_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	NA	A0A0P0IR83	Acinetobacter_phage	41.2	3.0e-37
WP_000209529.1|2705187_2706381_+	tryptophan synthase subunit beta	NA	NA	NA	NA	NA
WP_000443098.1|2706380_2707187_+	tryptophan synthase subunit alpha	NA	NA	NA	NA	NA
WP_000134814.1|2707567_2707747_+	general stress protein	NA	NA	NA	NA	NA
WP_001056507.1|2707832_2708333_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_001079492.1|2708378_2708885_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_000251936.1|2709372_2709543_-	hypothetical protein	NA	A0A0U2RK60	Escherichia_phage	62.5	9.4e-10
WP_000937495.1|2709657_2709927_-|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	79.4	9.3e-20
WP_000240999.1|2709983_2710652_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000885580.1|2710706_2711291_-|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	94.3	1.5e-102
WP_016230679.1|2711290_2714266_-|tail	prophage tail fiber N-terminal domain-containing protein	tail	A0A0K2FIZ6	Escherichia_phage	85.3	2.1e-48
WP_001233195.1|2714417_2715017_-	Ail/Lom family outer membrane beta-barrel protein	NA	H6WZM8	Escherichia_phage	94.0	7.7e-107
WP_000515773.1|2715084_2718564_-	host specificity protein J	NA	A0A291AWT4	Escherichia_phage	90.0	0.0e+00
WP_001332187.1|2718630_2718969_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000090879.1|2719042_2719645_-|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	85.1	6.2e-88
WP_000140762.1|2719581_2720325_-|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	94.7	6.1e-146
WP_001152522.1|2720329_2721028_-|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	97.4	3.4e-130
WP_000847402.1|2721027_2721357_-|tail	phage tail protein	tail	A0A2R9YJM0	Escherichia_phage	91.7	2.3e-52
WP_000082348.1|2721353_2723927_-|tail	phage tail tape measure protein	tail	A0A2R9YJM8	Escherichia_phage	84.1	0.0e+00
WP_000533402.1|2723907_2724321_-|tail	phage tail assembly protein T	tail	S5MDP5	Escherichia_phage	82.2	1.6e-42
WP_000479095.1|2724347_2724779_-|tail	phage minor tail protein G	tail	A0A0K2FIQ8	Enterobacteria_phage	68.8	6.2e-42
WP_000235110.1|2724792_2725545_-|tail	phage tail protein	tail	Q687F6	Enterobacteria_phage	98.4	1.2e-133
WP_000683079.1|2725552_2725948_-|tail	tail protein	tail	A0A2R9YJI2	Escherichia_phage	82.4	1.5e-58
WP_000974980.1|2725944_2726478_-|tail	phage tail protein	tail	A0A2R9YJK4	Escherichia_phage	66.7	1.6e-58
WP_001204554.1|2726493_2726847_-|tail	tail attachment protein	tail	A0A0K2FJB7	Enterobacteria_phage	70.1	1.5e-41
WP_000201495.1|2726839_2727223_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000522591.1|2727274_2728303_-|capsid	major capsid protein	capsid	C6ZCY2	Enterobacteria_phage	61.0	3.6e-112
WP_000256823.1|2728360_2728708_-|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	58.1	8.9e-23
WP_001253958.1|2728744_2730250_-	S49 family peptidase	NA	A0A2I6TC87	Escherichia_phage	53.5	3.6e-100
WP_000831818.1|2730239_2731832_-|portal	phage portal protein	portal	K7P6U7	Enterobacteria_phage	61.3	4.9e-185
WP_000259002.1|2731828_2732035_-|head,tail	head-tail joining protein	head,tail	K7PM10	Enterobacteria_phage	56.9	7.9e-11
WP_060703585.1|2732018_2733947_-|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	66.6	3.7e-259
WP_000867575.1|2733918_2734467_-|terminase	terminase small subunit	terminase	A0A0U2S671	Escherichia_phage	84.2	1.0e-57
WP_001331705.1|2734853_2735087_+	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	96.3	9.5e-21
WP_000057035.1|2735144_2735555_+	DUF1398 family protein	NA	C6ZCX4	Enterobacteria_phage	75.6	1.7e-52
WP_001082537.1|2735862_2736327_-|lysis	lysis protein	lysis	A0A0K2FJD0	Enterobacteria_phage	84.2	1.0e-61
WP_000992052.1|2736625_2737159_-	lysozyme	NA	Q08J98	Stx2-converting_phage	96.0	9.0e-99
WP_001351274.1|2737264_2737537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193259.1|2737502_2737847_-	YdfR family protein	NA	K7PGU6	Enterobacteria_phage	94.0	8.2e-37
WP_000372595.1|2737851_2738067_-|holin	class II holin family protein	holin	A0A2R2Z340	Escherichia_phage	98.6	3.4e-33
WP_001331709.1|2738335_2738563_-	DUF1737 domain-containing protein	NA	Q20GJ1	Phage_258-320	91.8	1.8e-32
WP_000935515.1|2739837_2740887_-	site-specific DNA-methyltransferase	NA	S5MDR0	Escherichia_phage	95.1	3.7e-197
WP_000917749.1|2741037_2741235_-	hypothetical protein	NA	Q9MC00	Enterobacteria_phage	98.5	3.6e-29
WP_000762880.1|2741459_2742281_-	antitermination protein	NA	K7P7B9	Enterobacteria_phage	60.1	8.5e-80
WP_000904114.1|2742277_2742652_-	RusA family crossover junction endodeoxyribonuclease	NA	V5URS4	Shigella_phage	62.7	1.1e-34
WP_001265108.1|2742664_2743711_-	DUF968 domain-containing protein	NA	U5P0K4	Shigella_phage	54.8	3.8e-109
WP_011478175.1|2743712_2743991_-	hypothetical protein	NA	I6PCV7	Cronobacter_phage	46.9	1.3e-11
WP_000813256.1|2744158_2744314_-	type I toxin-antitoxin system toxin HokD	NA	A0A0U2QV81	Escherichia_phage	98.0	5.0e-18
WP_122083109.1|2744415_2744523_+	hypothetical protein	NA	Q7Y2Q9	Escherichia_phage	100.0	3.8e-09
WP_000354966.1|2744931_2745933_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014639476.1|2745948_2746911_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001151216.1|2747102_2747525_-	DUF977 family protein	NA	A0A0U2QQN3	Escherichia_phage	88.5	8.2e-63
WP_001262357.1|2747565_2748636_-	hypothetical protein	NA	A0A088CD36	Shigella_phage	65.2	4.2e-63
WP_000693867.1|2748707_2749133_-	Rha family transcriptional regulator	NA	NA	NA	NA	NA
WP_000747951.1|2749116_2749359_-	hypothetical protein	NA	H9C161	Pectobacterium_phage	55.8	4.8e-07
WP_001362937.1|2749750_2750089_+	peptidase S24	NA	H9C160	Pectobacterium_phage	30.7	3.3e-06
WP_000379589.1|2750381_2750537_+	DUF1391 family protein	NA	M4QQ57	Salicola_phage	51.1	8.8e-07
WP_001171970.1|2750696_2750918_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001331716.1|2750918_2751083_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000449192.1|2751483_2751672_+	cell division inhibition protein DicB	NA	NA	NA	NA	NA
WP_001090203.1|2751668_2751860_+	DUF1482 family protein	NA	NA	NA	NA	NA
WP_000048435.1|2751952_2754424_+	exonuclease	NA	A0A192Y6E0	Salmonella_phage	58.8	5.0e-59
WP_000113189.1|2754488_2754737_+	excisionase	NA	NA	NA	NA	NA
WP_000113674.1|2754714_2755845_+|integrase	phage integrase Arm DNA-binding domain-containing protein	integrase	O21940	Phage_21	51.4	3.4e-103
2763211:2763226	attR	CGACGATAAAGGTTTT	NA	NA	NA	NA
>prophage 7
NZ_CP051714	Escherichia coli strain SCU-122 chromosome, complete genome	4911026	3057693	3125929	4911026	protease,head,integrase,terminase,capsid,tRNA	Bacillus_phage(13.04%)	57	3052693:3052708	3129326:3129341
3052693:3052708	attL	GCTCCGCTTCCGCCTG	NA	NA	NA	NA
WP_001331920.1|3057693_3058479_-|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
WP_000899600.1|3058614_3059394_+	envelope biogenesis factor ElyC	NA	NA	NA	NA	NA
WP_000436900.1|3059370_3060264_-	YcbJ family phosphotransferase	NA	NA	NA	NA	NA
WP_000011611.1|3060417_3061164_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000350058.1|3061160_3061343_-	protein YcaR	NA	NA	NA	NA	NA
WP_000056555.1|3061394_3062627_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000570549.1|3062663_3063650_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_000551259.1|3063646_3065395_-	lipid A ABC transporter ATP-binding protein/permease MsbA	NA	W8CYL7	Bacillus_phage	29.8	3.3e-57
WP_000705727.1|3065431_3067696_-	ComEC family protein	NA	NA	NA	NA	NA
WP_000167336.1|3067901_3068186_-	integration host factor subunit beta	NA	A7KV42	Bacillus_phage	40.2	3.2e-10
WP_000140327.1|3068345_3070019_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_000125016.1|3070129_3070813_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_001313710.1|3070985_3071750_-	metallopeptidase YcaL	NA	NA	NA	NA	NA
WP_000445244.1|3071919_3073203_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000057124.1|3073273_3074362_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	47.1	9.2e-82
WP_000642837.1|3074560_3075253_-	DUF421 domain-containing protein	NA	NA	NA	NA	NA
WP_000194828.1|3075382_3077143_+	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA	NA
WP_000642546.1|3077548_3078406_+	formate transporter FocA	NA	NA	NA	NA	NA
WP_001292822.1|3078460_3080743_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	41.5	1.0e-162
WP_000111043.1|3080934_3081675_+	pyruvate formate lyase 1-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	26.5	8.0e-21
WP_000109282.1|3081771_3082920_-	MFS transporter	NA	NA	NA	NA	NA
WP_000165876.1|3083233_3083860_+	hydrolase	NA	NA	NA	NA	NA
WP_000534662.1|3083895_3084759_-	dimethyl sulfoxide reductase anchor subunit DmsC	NA	NA	NA	NA	NA
WP_000213098.1|3084760_3085378_-	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	60.6	5.0e-77
WP_000850286.1|3085388_3087833_-	dimethylsulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	49.9	7.8e-222
WP_000886683.1|3088071_3089364_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	48.2	1.5e-94
WP_000067797.1|3089454_3090798_-	replication-associated recombination protein RarA	NA	G3MBE0	Bacillus_virus	40.8	2.1e-80
WP_001295343.1|3090808_3091420_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_000077107.1|3091578_3095622_-	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	48.7	1.2e-86
WP_000228473.1|3095756_3096251_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA	NA
WP_000537432.1|3096794_3097760_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	44.6	1.1e-62
WP_001043638.1|3097882_3099649_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	NA	W8CYL7	Bacillus_phage	24.3	3.2e-23
WP_001202198.1|3099649_3101371_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	30.8	1.2e-14
WP_001241673.1|3101412_3102117_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_001040187.1|3102401_3102620_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_000350182.1|3103661_3104216_-	type I-F CRISPR-associated endoribonuclease Cas6/Csy4	NA	NA	NA	NA	NA
WP_001029748.1|3104226_3105228_-	type I-F CRISPR-associated protein Csy3	NA	A0A2D0YRR8	Vibrio_phage	40.2	7.2e-49
WP_000415806.1|3106158_3107466_-	type I-F CRISPR-associated protein Csy1	NA	NA	NA	NA	NA
WP_001101565.1|3107795_3111029_-	type I-F CRISPR-associated helicase Cas3	NA	A0A2I7RCU8	Vibrio_phage	28.0	1.0e-83
WP_000097886.1|3111025_3112009_-	type I-F CRISPR-associated endonuclease Cas1	NA	A0A2D0YFC9	Vibrio_phage	35.5	3.4e-43
WP_000934041.1|3112841_3115118_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.5	1.9e-166
WP_000520781.1|3115148_3115469_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	44.4	1.6e-13
WP_000133395.1|3116161_3116443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000835278.1|3116699_3117242_-|terminase	terminase small subunit	terminase	O64316	Escherichia_phage	46.0	9.3e-35
WP_000224594.1|3117449_3117863_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000380879.1|3117875_3118211_-|head	head decoration protein	head	NA	NA	NA	NA
WP_000907460.1|3118222_3119278_-|capsid	major capsid protein	capsid	C6ZCY2	Enterobacteria_phage	43.4	2.7e-70
WP_000796963.1|3119277_3119484_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000126681.1|3119899_3120322_-	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_001260558.1|3120318_3120576_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000761791.1|3120864_3122613_-	DNA primase	NA	Q7M2A8	Enterobacteria_phage	40.3	4.6e-91
WP_000791984.1|3122609_3122909_-	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
WP_000549001.1|3122914_3123142_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014639773.1|3123134_3123476_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
WP_157838015.1|3123487_3124051_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001206975.1|3124061_3124271_-	AlpA family phage regulatory protein	NA	A0A2H4JB58	uncultured_Caudovirales_phage	71.4	1.5e-17
WP_000092882.1|3124690_3125929_-|integrase	site-specific integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	52.5	3.1e-126
3129326:3129341	attR	GCTCCGCTTCCGCCTG	NA	NA	NA	NA
>prophage 1
NZ_CP051715	Escherichia coli strain SCU-122 plasmid pSCU-122-2, complete sequence	114224	0	1961	114224	integrase	Macacine_betaherpesvirus(100.0%)	1	1106:1119	2201:2214
1106:1119	attL	ATCTGCCTGTTCCT	NA	NA	NA	NA
WP_001066947.1|1220_1961_-|integrase	tyrosine-type recombinase/integrase	integrase	I3WFA4	Macacine_betaherpesvirus	57.6	1.6e-24
WP_001066947.1|1220_1961_-|integrase	tyrosine-type recombinase/integrase	integrase	I3WFA4	Macacine_betaherpesvirus	57.6	1.6e-24
2201:2214	attR	AGGAACAGGCAGAT	NA	NA	NA	NA
>prophage 2
NZ_CP051715	Escherichia coli strain SCU-122 plasmid pSCU-122-2, complete sequence	114224	9674	15314	114224	transposase	Escherichia_phage(40.0%)	5	NA	NA
WP_001323403.1|9674_10454_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	100.0	1.5e-139
WP_001310017.1|10453_11476_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	99.7	3.2e-201
WP_000612626.1|12555_12903_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	100.0	2.6e-62
WP_000839179.1|12899_13304_-	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZCV4	Stx2-converting_phage	100.0	3.0e-70
WP_001189113.1|13805_15314_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	31.8	6.2e-44
>prophage 3
NZ_CP051715	Escherichia coli strain SCU-122 plasmid pSCU-122-2, complete sequence	114224	27549	33980	114224	transposase	Enterobacteria_phage(33.33%)	6	NA	NA
WP_000065240.1|27549_28305_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	33.9	3.2e-33
WP_000143800.1|28301_29801_-|transposase	IS21-like element ISEc10 family transposase	transposase	NA	NA	NA	NA
WP_001189106.1|30909_31398_+|transposase	transposase	transposase	A0A077SK28	Escherichia_phage	93.2	6.7e-24
WP_000874189.1|32302_32788_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001267176.1|32812_33298_-	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_000117262.1|33284_33980_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	7.5e-29
>prophage 4
NZ_CP051715	Escherichia coli strain SCU-122 plasmid pSCU-122-2, complete sequence	114224	42425	43130	114224	transposase	Escherichia_phage(100.0%)	1	NA	NA
WP_001067837.1|42425_43130_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.1	5.8e-138
>prophage 5
NZ_CP051715	Escherichia coli strain SCU-122 plasmid pSCU-122-2, complete sequence	114224	46725	50101	114224		Moraxella_phage(33.33%)	5	NA	NA
WP_001233838.1|46725_47187_-	thermonuclease family protein	NA	A0A0R6PHV6	Moraxella_phage	37.1	4.2e-20
WP_042010713.1|47431_47644_-	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000139321.1|47772_48333_-	fertility inhibition protein FinO	NA	NA	NA	NA	NA
WP_000704523.1|48435_49296_-	alpha/beta hydrolase	NA	A2RQC8	Archaeal_BJ1_virus	23.5	1.9e-10
WP_000205725.1|49354_50101_-	conjugal transfer pilus acetylase TraX	NA	A0A077JBM8	Xanthomonas_phage	30.8	2.4e-09
>prophage 6
NZ_CP051715	Escherichia coli strain SCU-122 plasmid pSCU-122-2, complete sequence	114224	75814	76036	114224		Vibrio_virus(100.0%)	1	NA	NA
WP_001278694.1|75814_76036_-	conjugal transfer protein TraR	NA	A2I309	Vibrio_virus	40.8	4.4e-07
>prophage 7
NZ_CP051715	Escherichia coli strain SCU-122 plasmid pSCU-122-2, complete sequence	114224	84076	92096	114224		Yersinia_phage(25.0%)	11	NA	NA
WP_001234489.1|84076_84898_-	DUF945 domain-containing protein	NA	A0A2C9CYF8	Yersinia_phage	38.2	5.7e-44
WP_000107526.1|85016_85304_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001337416.1|85367_85604_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001302184.1|86219_86378_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA	NA
WP_001276230.1|86653_87373_-	plasmid SOS inhibition protein A	NA	NA	NA	NA	NA
WP_000845910.1|87369_87804_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA	NA
WP_001145501.1|87858_89817_-	ParB/RepB/Spo0J family partition protein	NA	G8DH78	Emiliania_huxleyi_virus	27.4	7.3e-21
WP_000006018.1|89875_90109_-	DUF905 domain-containing protein	NA	NA	NA	NA	NA
WP_000290833.1|90165_90693_-	single-stranded DNA-binding protein	NA	I3PGW4	Xanthomonas_phage	74.4	6.0e-47
WP_024185774.1|90994_91447_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001298559.1|91532_92096_-	class I SAM-dependent methyltransferase	NA	A8HNV9	Thalassomonas_phage	37.3	4.7e-21
>prophage 8
NZ_CP051715	Escherichia coli strain SCU-122 plasmid pSCU-122-2, complete sequence	114224	97731	101012	114224	transposase	Enterobacteria_phage(66.67%)	5	NA	NA
WP_000086169.1|97731_98415_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.4	2.8e-28
WP_001310011.1|98490_98802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001298677.1|98798_99002_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000952372.1|99042_100215_+|transposase	IS21-like element IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	99.5	3.5e-228
WP_000544830.1|100214_101012_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	99.6	1.9e-145
>prophage 9
NZ_CP051715	Escherichia coli strain SCU-122 plasmid pSCU-122-2, complete sequence	114224	104146	109561	114224	integrase	Escherichia_phage(40.0%)	7	102928:102940	109747:109759
102928:102940	attL	GCCAGTGCCCGCC	NA	NA	NA	NA
WP_000619112.1|104146_104395_+	DinI-like family protein	NA	Q2A098	Sodalis_phage	48.0	1.2e-13
WP_000109079.1|104391_104829_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	47.6	1.1e-25
WP_000340835.1|106103_106496_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001103694.1|106500_107472_-	hypothetical protein	NA	A0A222YXF2	Escherichia_phage	42.9	9.7e-67
WP_000633911.1|107700_108345_+	AAA family ATPase	NA	A0A222YXS3	Escherichia_phage	43.5	8.8e-40
WP_000239529.1|108338_108614_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000016979.1|108751_109561_-|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	95.5	7.8e-54
109747:109759	attR	GGCGGGCACTGGC	NA	NA	NA	NA
