assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_012931625.1_ASM1293162v1	NZ_CP051869	Acinetobacter baumannii strain Ab-D10a-a chromosome, complete genome	1	2031217-2031290	1	CRISPRCasFinder	no		cas3,RT,csa3,WYL,DEDDh	Orphan	CTTAGGATGTCTCCATCACCGCC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,WYL,DEDDh	NA|1064aa|up_2|NZ_CP051869.1_2025980_2029172_+,NA|198aa|up_1|NZ_CP051869.1_2029401_2029995_+,NA|1124aa|down_0|NZ_CP051869.1_2034488_2037860_-,NA|187aa|down_1|NZ_CP051869.1_2038119_2038680_-,NA|354aa|down_2|NZ_CP051869.1_2038731_2039793_-,NA|183aa|down_4|NZ_CP051869.1_2041466_2042015_-,NA|383aa|down_5|NZ_CP051869.1_2042611_2043760_+	NA|456aa|up_9|NZ_CP051869.1_2017310_2018678_+	cd05664, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|336aa|up_8|NZ_CP051869.1_2018736_2019744_-	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|342aa|up_7|NZ_CP051869.1_2019959_2020985_+	pfam00487, FA_desaturase, Fatty acid desaturase	NA|329aa|up_6|NZ_CP051869.1_2021331_2022318_+	pfam08908, DUF1852, Domain of unknown function (DUF1852)	NA|348aa|up_5|NZ_CP051869.1_2022339_2023383_+	PRK09121, PRK09121, methionine synthase	NA|164aa|up_4|NZ_CP051869.1_2023568_2024060_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|220aa|up_3|NZ_CP051869.1_2025053_2025713_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|1064aa|up_2|NZ_CP051869.1_2025980_2029172_+	NA	NA|198aa|up_1|NZ_CP051869.1_2029401_2029995_+	NA	NA|75aa|up_0|NZ_CP051869.1_2030181_2030406_-	pfam17074, Darcynin, Darcynin, domain of unknown function	NA|1124aa|down_0|NZ_CP051869.1_2034488_2037860_-	NA	NA|187aa|down_1|NZ_CP051869.1_2038119_2038680_-	NA	NA|354aa|down_2|NZ_CP051869.1_2038731_2039793_-	NA	NA|259aa|down_3|NZ_CP051869.1_2040390_2041167_+	pfam13643, DUF4145, Domain of unknown function (DUF4145)	NA|183aa|down_4|NZ_CP051869.1_2041466_2042015_-	NA	NA|383aa|down_5|NZ_CP051869.1_2042611_2043760_+	NA	NA|101aa|down_6|NZ_CP051869.1_2043863_2044166_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|662aa|down_7|NZ_CP051869.1_2044383_2046369_-	pfam06527, TniQ, TniQ	NA|315aa|down_8|NZ_CP051869.1_2046371_2047316_-	pfam05621, TniB, Bacterial TniB protein	NA|626aa|down_9|NZ_CP051869.1_2047305_2049183_-	pfam00665, rve, Integrase core domain
GCF_012931625.1_ASM1293162v1	NZ_CP051869	Acinetobacter baumannii strain Ab-D10a-a chromosome, complete genome	2	2890285-2890382	2	CRISPRCasFinder	no		cas3,RT,csa3,WYL,DEDDh	Orphan	CATGAATTTACTTCAGAAGAAGCTCGTGAAGCTGG	35	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,WYL,DEDDh	NA|48aa|up_9|NZ_CP051869.1_2881612_2881756_+,NA|143aa|up_8|NZ_CP051869.1_2882025_2882454_+,NA|74aa|up_7|NZ_CP051869.1_2882541_2882763_+,NA|106aa|up_6|NZ_CP051869.1_2882847_2883165_-,NA|138aa|up_0|NZ_CP051869.1_2889251_2889665_-,NA|79aa|down_0|NZ_CP051869.1_2891445_2891682_-,NA|51aa|down_8|NZ_CP051869.1_2900664_2900817_-	NA|48aa|up_9|NZ_CP051869.1_2881612_2881756_+	NA	NA|143aa|up_8|NZ_CP051869.1_2882025_2882454_+	NA	NA|74aa|up_7|NZ_CP051869.1_2882541_2882763_+	NA	NA|106aa|up_6|NZ_CP051869.1_2882847_2883165_-	NA	NA|73aa|up_5|NZ_CP051869.1_2883270_2883489_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|160aa|up_4|NZ_CP051869.1_2883773_2884253_-	COG1546, CinA, Uncharacterized protein (competence- and mitomycin-induced) [General function prediction only]	NA|470aa|up_3|NZ_CP051869.1_2884568_2885978_+	pfam14518, Haem_oxygenas_2, Iron-containing redox enzyme	NA|715aa|up_2|NZ_CP051869.1_2886032_2888177_+	PRK11249, katE, hydroperoxidase II; Provisional	NA|293aa|up_1|NZ_CP051869.1_2888231_2889110_-	cd05355, SDR_c1, classical (c) SDR, subgroup 1	NA|138aa|up_0|NZ_CP051869.1_2889251_2889665_-	NA	NA|79aa|down_0|NZ_CP051869.1_2891445_2891682_-	NA	NA|204aa|down_1|NZ_CP051869.1_2891964_2892576_+	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit	NA|204aa|down_2|NZ_CP051869.1_2892648_2893260_-	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|152aa|down_3|NZ_CP051869.1_2893416_2893872_+	smart00344, HTH_ASNC, helix_turn_helix ASNC type	NA|549aa|down_4|NZ_CP051869.1_2893937_2895584_-	COG1457, CodB, Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]	NA|1155aa|down_5|NZ_CP051869.1_2895749_2899214_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|320aa|down_6|NZ_CP051869.1_2899210_2900170_+	cd19920, REC_PA4781-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase PA4781 and similar domains	NA|95aa|down_7|NZ_CP051869.1_2900312_2900597_+	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase	NA|51aa|down_8|NZ_CP051869.1_2900664_2900817_-	NA	NA|212aa|down_9|NZ_CP051869.1_2900905_2901541_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]
GCF_012931625.1_ASM1293162v1	NZ_CP051869	Acinetobacter baumannii strain Ab-D10a-a chromosome, complete genome	3	3571619-3571763	3	CRISPRCasFinder	no		cas3,RT,csa3,WYL,DEDDh	Orphan	CAAAGCTTTAGCCGCTTTGTCTTGCTCAGGTGGCGTTTTTTTATAC	46	1	1	3571665-3571717	NZ_CP051869.1_3571567-3571619	NA	1	1	Orphan	cas3,RT,csa3,WYL,DEDDh	NA|109aa|up_2|NZ_CP051869.1_3570298_3570625_-,NA|120aa|up_1|NZ_CP051869.1_3570725_3571085_-,NA|78aa|up_0|NZ_CP051869.1_3571300_3571534_+,NA|108aa|down_4|NZ_CP051869.1_3574789_3575113_-,NA|82aa|down_9|NZ_CP051869.1_3579630_3579876_+	NA|382aa|up_9|NZ_CP051869.1_3565231_3566377_+	TIGR00203, ubiquinol_oxidase_subunit_2, cytochrome d oxidase, subunit II (cydB)	NA|34aa|up_8|NZ_CP051869.1_3566390_3566492_+	pfam08173, YbgT_YccB, Membrane bound YbgT-like protein	NA|100aa|up_7|NZ_CP051869.1_3566492_3566792_+	pfam09600, Cyd_oper_YbgE, Cyd operon protein YbgE (Cyd_oper_YbgE)	NA|175aa|up_6|NZ_CP051869.1_3566804_3567329_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|224aa|up_5|NZ_CP051869.1_3567401_3568073_-	pfam09829, DUF2057, Uncharacterized protein conserved in bacteria (DUF2057)	NA|199aa|up_4|NZ_CP051869.1_3568298_3568895_-	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only]	NA|369aa|up_3|NZ_CP051869.1_3569084_3570191_-	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|109aa|up_2|NZ_CP051869.1_3570298_3570625_-	NA	NA|120aa|up_1|NZ_CP051869.1_3570725_3571085_-	NA	NA|78aa|up_0|NZ_CP051869.1_3571300_3571534_+	NA	NA|111aa|down_0|NZ_CP051869.1_3572010_3572343_+	pfam11042, DUF2750, Protein of unknown function (DUF2750)	NA|144aa|down_1|NZ_CP051869.1_3572483_3572915_+	cd04623, CBS_pair_bac_euk, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and eukaryotes	NA|403aa|down_2|NZ_CP051869.1_3572965_3574174_-	PRK02627, PRK02627, acetylornithine aminotransferase; Provisional	NA|114aa|down_3|NZ_CP051869.1_3574401_3574743_+	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family	NA|108aa|down_4|NZ_CP051869.1_3574789_3575113_-	NA	NA|301aa|down_5|NZ_CP051869.1_3575356_3576259_+	cd08473, PBP2_CrgA_like_4, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|265aa|down_6|NZ_CP051869.1_3576310_3577105_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|434aa|down_7|NZ_CP051869.1_3577457_3578759_+	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|140aa|down_8|NZ_CP051869.1_3578951_3579371_+	COG3193, GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol [General function prediction only]	NA|82aa|down_9|NZ_CP051869.1_3579630_3579876_+	NA
GCF_012931625.1_ASM1293162v1	NZ_CP051869	Acinetobacter baumannii strain Ab-D10a-a chromosome, complete genome	4	3828888-3828976	4	CRISPRCasFinder	no		cas3,RT,csa3,WYL,DEDDh	Orphan	TCTTGCGAAAAAGTAAGAGATAATCAATCTC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,WYL,DEDDh	NA,NA|73aa|down_2|NZ_CP051869.1_3832124_3832343_-	NA|284aa|up_9|NZ_CP051869.1_3815261_3816113_-	COG3449, COG3449, DNA gyrase inhibitor [DNA replication, recombination, and repair]	NA|122aa|up_8|NZ_CP051869.1_3816194_3816560_-	cd00580, CHMI, 5-carboxymethyl-2-hydroxymuconate isomerase (CHMI) is a trimeric enzyme catalyzing the isomerization of the unsaturated ketone 5-(carboxymethyl)-2-hydroxymuconate to 5-(carboxymethyl)-2-oxo-3-hexene-1,6-dionate	NA|571aa|up_7|NZ_CP051869.1_3816597_3818310_-	cd18037, DEXSc_Pif1_like, DEAD-box helicase domain of Pif1	NA|391aa|up_6|NZ_CP051869.1_3818540_3819713_+	cd08188, PDDH, 1,3-Propanediol (1,3-PD) dehydrogenase	NA|323aa|up_5|NZ_CP051869.1_3819907_3820876_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|397aa|up_4|NZ_CP051869.1_3820872_3822063_-	PRK11388, PRK11388, DNA-binding transcriptional regulator DhaR; Provisional	NA|504aa|up_3|NZ_CP051869.1_3822206_3823718_+	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like	NA|479aa|up_2|NZ_CP051869.1_3823939_3825376_+	TIGR00908, putative_ethanolamine_permease, ethanolamine permease	NA|462aa|up_1|NZ_CP051869.1_3825392_3826778_+	PRK15067, PRK15067, ethanolamine ammonia-lyase subunit EutB	NA|241aa|up_0|NZ_CP051869.1_3827768_3828491_+	PRK07053, PRK07053, glutamine amidotransferase; Provisional	NA|170aa|down_0|NZ_CP051869.1_3830872_3831382_+	cd01920, cyclophilin_EcCYP_like, cyclophilin_EcCYP_like: cyclophilin-type A-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to the cytosolic E	NA|240aa|down_1|NZ_CP051869.1_3831397_3832117_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|73aa|down_2|NZ_CP051869.1_3832124_3832343_-	NA	NA|218aa|down_3|NZ_CP051869.1_3832482_3833136_+	PRK11053, PRK11053, oxygen-insensitive NAD(P)H nitroreductase	NA|286aa|down_4|NZ_CP051869.1_3833174_3834032_-	TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein	NA|173aa|down_5|NZ_CP051869.1_3834163_3834682_-	PRK00395, hfq, RNA-binding protein Hfq; Provisional	NA|315aa|down_6|NZ_CP051869.1_3834764_3835709_-	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|651aa|down_7|NZ_CP051869.1_3835715_3837668_-	PRK00095, mutL, DNA mismatch repair endonuclease MutL	NA|158aa|down_8|NZ_CP051869.1_3837660_3838134_-	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE	NA|293aa|down_9|NZ_CP051869.1_3838283_3839162_+	cd02558, PSRA_1, Pseudouridine synthase, a subgroup of the RluA family
GCF_012931625.1_ASM1293162v1	NZ_CP051870	Acinetobacter baumannii strain Ab-D10a-a plasmid pAb-D10a-a_1, complete sequence	1	31297-31373	1	CRISPRCasFinder	no			Orphan	CTTGTTGCAGTAGATGAACCAGA	23	1	2	31320-31350|31320-31350	NZ_CP051870.1_31410-31440|NZ_CP051870.1_31500-31530	NA	1	1	Orphan	cas3,RT,csa3,WYL,DEDDh	NA|100aa|up_6|NZ_CP051870.1_22728_23028_+,NA|94aa|down_0|NZ_CP051870.1_31858_32140_+,NA|129aa|down_2|NZ_CP051870.1_33859_34246_+,NA|75aa|down_3|NZ_CP051870.1_34256_34481_+,NA|112aa|down_6|NZ_CP051870.1_36706_37042_+	NA|102aa|up_9|NZ_CP051870.1_19624_19930_+	pfam04956, TrbC, TrbC/VIRB2 family	NA|109aa|up_8|NZ_CP051870.1_19929_20256_+	pfam05101, VirB3, Type IV secretory pathway, VirB3-like protein	NA|821aa|up_7|NZ_CP051870.1_20263_22726_+	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family	NA|100aa|up_6|NZ_CP051870.1_22728_23028_+	NA	NA|342aa|up_5|NZ_CP051870.1_23051_24077_+	pfam04610, TrbL, TrbL/VirB6 plasmid conjugal transfer protein	NA|234aa|up_4|NZ_CP051870.1_24088_24790_+	pfam07996, T4SS, Type IV secretion system proteins	NA|272aa|up_3|NZ_CP051870.1_24953_25769_+	COG3736, VirB8, Type IV secretory pathway, component VirB8 [Intracellular trafficking and secretion]	NA|298aa|up_2|NZ_CP051870.1_25780_26674_+	TIGR02781, Protein_virB9, P-type conjugative transfer protein VirB9	NA|475aa|up_1|NZ_CP051870.1_26673_28098_+	cd16429, VirB10, VirB10 forms part of core complex in Type IV secretion system (T4SS)	NA|371aa|up_0|NZ_CP051870.1_28078_29191_+	TIGR02788, conjugal_transfer_protein, P-type DNA transfer ATPase VirB11	NA|94aa|down_0|NZ_CP051870.1_31858_32140_+	NA	NA|430aa|down_1|NZ_CP051870.1_32150_33440_+	pfam18821, LPD7, Large polyvalent protein-associated domain 7	NA|129aa|down_2|NZ_CP051870.1_33859_34246_+	NA	NA|75aa|down_3|NZ_CP051870.1_34256_34481_+	NA	NA|337aa|down_4|NZ_CP051870.1_34636_35647_-	pfam18144, SMODS, Second Messenger Oligonucleotide or Dinucleotide Synthetase domain	NA|293aa|down_5|NZ_CP051870.1_35667_36546_-	pfam18159, S_4TM, SMODS-associating 4TM effector domain	NA|112aa|down_6|NZ_CP051870.1_36706_37042_+	NA	NA|204aa|down_7|NZ_CP051870.1_37254_37866_+	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme	NA|295aa|down_8|NZ_CP051870.1_38055_38940_-	cd05152, MPH2', Macrolide 2'-Phosphotransferase	NA|492aa|down_9|NZ_CP051870.1_38995_40471_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
GCF_012931625.1_ASM1293162v1	NZ_CP051871	Acinetobacter baumannii strain Ab-D10a-a plasmid pAb-D10a-a_2, complete sequence	1	2090-2186	1	CRISPRCasFinder	no			Orphan	GTCATAGTTAGTAGTCAATCCGTCATAGTTAAG	33	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,WYL,DEDDh	NA|182aa|up_1|NZ_CP051871.1_545_1091_-,NA|124aa|down_0|NZ_CP051871.1_3252_3624_+,NA|57aa|down_1|NZ_CP051871.1_3626_3797_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|182aa|up_1|NZ_CP051871.1_545_1091_-	NA	NA|298aa|up_0|NZ_CP051871.1_1154_2048_-	pfam01051, Rep_3, Initiator Replication protein	NA|124aa|down_0|NZ_CP051871.1_3252_3624_+	NA	NA|57aa|down_1|NZ_CP051871.1_3626_3797_+	NA	NA|154aa|down_2|NZ_CP051871.1_4119_4581_-	cd12208, septicolysin_like, putative septicolysin, cholesterol-dependent cytolysin family and related proteins	NA|804aa|down_3|NZ_CP051871.1_4885_7297_-	COG1629, CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism]	NA|105aa|down_4|NZ_CP051871.1_7424_7739_-	pfam14384, BrnA_antitoxin, BrnA antitoxin of type II toxin-antitoxin system	NA|96aa|down_5|NZ_CP051871.1_7725_8013_-	pfam04365, BrnT_toxin, Ribonuclease toxin, BrnT, of type II toxin-antitoxin system	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
