The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040611	Campylobacter sp. CFSAN093238 chromosome, complete genome	1745502	56469	105208	1745502	transposase,terminase,capsid,integrase,plate,tRNA,tail	Campylobacter_phage(51.72%)	66	48419:48435	91452:91468
48419:48435	attL	ATTGAAATTAAAAAAAA	NA	NA	NA	NA
WP_002877660.1|56469_57099_+	S24 family peptidase	NA	A7YGK7	Campylobacter_phage	93.8	7.7e-57
WP_002865289.1|57157_57445_+	hypothetical protein	NA	A7YGG4	Campylobacter_phage	100.0	1.9e-47
WP_002888079.1|57472_58288_-	DNA adenine methylase	NA	A7YGG5	Campylobacter_phage	99.6	4.1e-151
WP_002875578.1|58392_58881_-	phage virion morphogenesis protein	NA	A7YG96	Campylobacter_phage	100.0	1.6e-89
WP_052803291.1|58884_61107_-|tail	phage tail tape measure protein	tail	A7YG97	Campylobacter_phage	99.7	0.0e+00
WP_002912416.1|61148_61454_+	hypothetical protein	NA	A7YGX3	Campylobacter_phage	90.1	4.7e-36
WP_002843342.1|61565_61805_-|tail	phage tail assembly protein	tail	A7YGZ3	Campylobacter_phage	62.5	3.2e-11
WP_032582436.1|61957_62467_-|tail	tail protein	tail	A7YG76	Campylobacter_phage	98.8	9.5e-90
WP_052945491.1|62493_63687_-|tail	phage tail sheath family protein	tail	A7YGA3	Campylobacter_phage	99.7	1.5e-197
WP_002834656.1|63697_64711_-	hypothetical protein	NA	A7YGH6	Campylobacter_phage	98.5	2.9e-191
WP_002888062.1|64812_65184_-	DUF1353 domain-containing protein	NA	A7YGF6	Campylobacter_phage	100.0	5.7e-68
WP_002872718.1|65180_65687_-	DUF4376 domain-containing protein	NA	A7YGY7	Campylobacter_phage	98.2	6.3e-86
WP_168985418.1|65696_66776_-|tail	phage tail protein	tail	A7YGV0	Campylobacter_phage	99.6	1.1e-148
WP_002864870.1|66775_67396_-|tail	phage tail protein I	tail	A7YGM6	Campylobacter_phage	97.4	2.8e-59
WP_002888058.1|67392_68559_-|plate	baseplate J/gp47 family protein	plate	A0A1X9SH02	Bradyrhizobium_phage	25.8	3.3e-13
WP_002795239.1|68555_68846_-	GPW/gp25 family protein	NA	Q8H9N4	Vibrio_phage	40.8	2.7e-09
WP_002795238.1|68842_69034_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002827116.1|69042_69675_-|plate	phage baseplate assembly protein V	plate	V5YUM9	Pseudomonas_phage	35.6	4.6e-09
WP_002784492.1|69674_69989_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002784496.1|70100_70349_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002827119.1|70345_70687_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002870185.1|70697_71087_-	DUF882 domain-containing protein	NA	A0A1X9Q0V8	Human_gokushovirus	45.9	4.2e-21
WP_002784501.1|71235_71670_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002912880.1|71671_72487_+	hypothetical protein	NA	A0A2H4JAW3	uncultured_Caudovirales_phage	48.4	2.9e-24
WP_038401719.1|72489_73017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002803364.1|73019_73997_+|capsid	major capsid protein	capsid	R9TRN2	Rhizobium_phage	23.7	5.1e-07
WP_038401722.1|74112_74571_+	DUF1320 family protein	NA	NA	NA	NA	NA
WP_002803360.1|74563_75163_+	DUF1804 family protein	NA	NA	NA	NA	NA
WP_038401728.1|75162_76833_+|terminase	phage terminase large subunit	terminase	H1ZZE1	Pseudomonas_virus	41.2	1.5e-91
WP_168985419.1|76842_78213_+	DUF935 family protein	NA	A0A2H4JHL1	uncultured_Caudovirales_phage	26.6	5.8e-17
WP_168985420.1|78214_79453_+	hypothetical protein	NA	M4M9M5	Vibrio_phage	29.8	6.7e-20
WP_002784519.1|79578_79953_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_002784520.1|79945_80137_+|tail	tail protein	tail	NA	NA	NA	NA
WP_052797565.1|80130_81108_+|tail	phage tail protein	tail	A0A219Y9Y2	Aeromonas_phage	25.7	4.8e-13
WP_002784523.1|81104_81389_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_002876312.1|81482_82154_+	endonuclease	NA	NA	NA	NA	NA
WP_002784526.1|82145_82421_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002876315.1|82467_82917_-	DUF1018 domain-containing protein	NA	NA	NA	NA	NA
WP_002793908.1|82913_83606_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002784531.1|83605_83875_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002793909.1|83871_84834_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002791413.1|84942_85329_-	hypothetical protein	NA	D5GVQ0	Campylobacter_virus	56.4	2.7e-36
WP_002791414.1|85325_85598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002806832.1|85824_86310_-	host-nuclease inhibitor protein Gam	NA	A0A2K9VGT9	Faecalibacterium_phage	34.0	3.2e-18
WP_002791419.1|86416_86758_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002824157.1|86814_87000_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002795448.1|86996_87188_-	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA	NA
WP_002806833.1|87190_88114_-	AAA family ATPase	NA	A0A2H4JAW1	uncultured_Caudovirales_phage	24.5	3.9e-09
WP_052795007.1|88284_90360_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_002793921.1|90356_90557_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002804144.1|90706_91381_+	LexA family transcriptional regulator	NA	X2KRC9	Campylobacter_phage	32.1	9.8e-26
WP_002917944.1|91380_92079_+	hypothetical protein	NA	NA	NA	NA	NA
91452:91468	attR	ATTGAAATTAAAAAAAA	NA	NA	NA	NA
WP_002851804.1|92339_92987_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002859745.1|92986_94795_-	translational GTPase TypA	NA	A0A2K9L2P9	Tupanvirus	37.1	7.0e-26
WP_002782892.1|94929_95253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075912916.1|95268_97062_+	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_002805290.1|97115_98000_+	flagellar basal body rod modification protein	NA	NA	NA	NA	NA
WP_002851688.1|98003_99641_+	flagellar hook protein FlgE	NA	NA	NA	NA	NA
WP_002851645.1|99644_101516_-	DUF342 domain-containing protein	NA	NA	NA	NA	NA
WP_002911176.1|101472_102237_-	bacteriohemerythrin	NA	NA	NA	NA	NA
WP_002869942.1|102744_102894_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002851927.1|103116_103461_+	anion permease	NA	NA	NA	NA	NA
WP_002869943.1|103403_103619_+	anion permease	NA	NA	NA	NA	NA
WP_002868357.1|103533_103797_+	anion permease	NA	NA	NA	NA	NA
WP_002869944.1|103912_104164_+	anion permease	NA	NA	NA	NA	NA
WP_002851977.1|104191_105208_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
>prophage 2
NZ_CP040611	Campylobacter sp. CFSAN093238 chromosome, complete genome	1745502	964516	1016716	1745502	plate,tRNA,integrase,protease	Phaeocystis_globosa_virus(25.0%)	42	974057:974074	987850:987867
WP_002870052.1|964516_965035_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_002853001.1|965133_965550_+	PepSY-like domain-containing protein	NA	NA	NA	NA	NA
WP_002886756.1|965558_967169_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	R4TQL5	Phaeocystis_globosa_virus	44.4	1.7e-71
WP_002870050.1|967172_968423_-|tRNA	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB	tRNA	NA	NA	NA	NA
WP_002852957.1|968419_969991_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_002852978.1|969987_971043_-	3-dehydroquinate synthase	NA	A0A0P0C619	Ostreococcus_mediterraneus_virus	35.0	5.7e-28
WP_002870049.1|971088_972489_-	potassium transporter TrkA	NA	NA	NA	NA	NA
WP_002912984.1|972518_973640_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	38.8	3.7e-70
WP_002912988.1|973641_974409_+	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
974057:974074	attL	ATTTAAAAATTTTAAATT	NA	NA	NA	NA
WP_074482857.1|974883_975312_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002887134.1|975355_976294_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_002834760.1|976453_976684_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032600723.1|976695_976923_+	WGR domain-containing protein	NA	NA	NA	NA	NA
WP_002807233.1|977239_977383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002887129.1|977582_977870_-	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA	NA
WP_002807582.1|977866_978016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002782139.1|978288_978516_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052790989.1|982538_983342_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100624690.1|983364_984657_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079460556.1|988160_989546_-	hypothetical protein	NA	NA	NA	NA	NA
987850:987867	attR	ATTTAAAAATTTTAAATT	NA	NA	NA	NA
WP_052775879.1|990157_990667_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016818321.1|990785_991289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052775878.1|991289_992822_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042635852.1|992963_993281_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052775877.1|993288_994812_-	DUF2974 domain-containing protein	NA	NA	NA	NA	NA
WP_002870192.1|995068_995392_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043019061.1|995918_996506_+	lysozyme	NA	D6QWN8	uncultured_phage	35.7	1.7e-13
WP_002779560.1|996534_996894_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168985445.1|997162_1001095_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042635858.1|1001113_1002382_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002779664.1|1002385_1003285_-	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_002902236.1|1003281_1006809_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_002779662.1|1006926_1007442_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_002869988.1|1007691_1008465_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_002779660.1|1008461_1009859_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_002779659.1|1009868_1010315_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_002779658.1|1010440_1011688_+	type VI secretion system domain-containing protein	NA	NA	NA	NA	NA
WP_002800584.1|1011756_1012242_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_002869989.1|1012243_1013698_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_002779655.1|1013700_1014093_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_002779654.1|1014089_1015811_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_168985446.1|1015807_1016716_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 3
NZ_CP040611	Campylobacter sp. CFSAN093238 chromosome, complete genome	1745502	1458833	1466004	1745502		Synechococcus_phage(28.57%)	8	NA	NA
WP_002876465.1|1458833_1459508_-	NTP transferase domain-containing protein	NA	A0A2K9L821	Tupanvirus	27.7	4.2e-08
WP_002876464.1|1459495_1460101_-	D-sedoheptulose 7-phosphate isomerase	NA	A0A067XQR2	Caulobacter_phage	35.0	4.9e-16
WP_002909367.1|1460106_1461105_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_002876275.1|1461319_1462339_-	D-glycero-D-manno-heptose 7-phosphate kinase	NA	A0A222YW25	Synechococcus_phage	41.0	4.6e-59
WP_002860369.1|1462413_1463352_-	NAD-dependent epimerase/dehydratase	NA	A0A0F7LC08	uncultured_marine_virus	45.9	1.4e-73
WP_002876274.1|1463375_1464410_-	GDP-mannose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	72.8	2.3e-143
WP_002876273.1|1464418_1465459_-	NAD-dependent epimerase/dehydratase family protein	NA	M1HKX0	Paramecium_bursaria_Chlorella_virus	40.5	4.4e-65
WP_002871486.1|1465458_1466004_-	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	A0A1D7XFA9	Escherichia_phage	30.4	2.2e-15
