The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP051640	Avibacterium paragallinarum strain ADL-AP07 chromosome, complete genome	2415993	264093	278510	2415993		Mannheimia_phage(41.67%)	21	NA	NA
WP_051128137.1|264093_264738_-	hypothetical protein	NA	A0A0M3LPL3	Mannheimia_phage	77.9	5.0e-19
WP_017806446.1|265413_265635_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017807323.1|265649_265820_+	DUF1508 domain-containing protein	NA	NA	NA	NA	NA
WP_035689467.1|266179_266620_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152436202.1|266622_267144_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046097533.1|267633_268299_-	helix-turn-helix domain-containing protein	NA	A0A0M3LSL8	Mannheimia_phage	77.0	2.0e-71
WP_046097532.1|268398_268620_+	hypothetical protein	NA	A0A2I6PIE5	Escherichia_phage	44.6	3.2e-10
WP_035689204.1|268668_269130_+	hypothetical protein	NA	NA	NA	NA	NA
WP_035689202.1|269176_269950_+	Rha family transcriptional regulator	NA	A0A2D0YGX8	Vibrio_phage	42.0	6.6e-42
WP_035689199.1|269946_270759_+	replication protein	NA	A0A0P0IKQ2	Acinetobacter_phage	45.6	1.1e-15
WP_035689196.1|270751_271591_+	ATP-binding protein	NA	K7PLU3	Enterobacteria_phage	48.9	4.4e-68
WP_035689193.1|271587_272181_+	adenine methyltransferase	NA	A0A0M3LNW2	Mannheimia_phage	56.8	6.4e-53
WP_035689209.1|272189_272627_+	DUF1367 family protein	NA	A0A0M3LR84	Mannheimia_phage	71.0	8.5e-55
WP_035689190.1|272951_273548_+	recombination protein NinG	NA	H6WRY9	Salmonella_phage	43.4	9.6e-33
WP_017807425.1|273621_274263_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017807426.1|274252_274915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026138622.1|275024_275318_-	HigA family addiction module antidote protein	NA	I6ZVM3	Aeromonas_phage	48.7	4.7e-09
WP_046097530.1|275327_275606_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_081637567.1|275828_277055_+	DUF4041 domain-containing protein	NA	X5JAC1	Clostridium_phage	49.3	5.0e-44
WP_035689183.1|277047_277266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081637566.1|277610_278510_+	hypothetical protein	NA	A0A0M3LR56	Mannheimia_phage	72.1	5.5e-48
>prophage 2
NZ_CP051640	Avibacterium paragallinarum strain ADL-AP07 chromosome, complete genome	2415993	1450921	1457401	2415993	integrase	Mannheimia_phage(25.0%)	10	1449910:1449925	1462418:1462433
1449910:1449925	attL	GATCACATCAATAACA	NA	NA	NA	NA
WP_035688073.1|1450921_1451941_-|integrase	site-specific integrase	integrase	Q7Y5X7	Haemophilus_phage	88.2	2.3e-175
WP_051128099.1|1452168_1452765_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
WP_035688071.1|1453008_1453671_-	KilA-N domain-containing protein	NA	D0UIM5	Aggregatibacter_phage	43.2	6.5e-14
WP_035688068.1|1454185_1454395_+	hypothetical protein	NA	A0A0M3LQV3	Mannheimia_phage	58.1	6.1e-11
WP_035688065.1|1454704_1454887_+	hypothetical protein	NA	Q19US2	Mannheimia_phage	52.6	4.0e-06
WP_035688062.1|1454909_1455224_-	hypothetical protein	NA	X2CY11	Brucella_phage	40.2	3.6e-07
WP_035688059.1|1455266_1455515_-	hypothetical protein	NA	NA	NA	NA	NA
WP_035688057.1|1455523_1456003_-	single-stranded DNA-binding protein	NA	F8TUL2	EBPR_podovirus	52.8	2.1e-38
WP_035688055.1|1456002_1456890_-	ATP-binding protein	NA	A0A1B1P9H8	Acinetobacter_phage	55.9	1.3e-57
WP_035688053.1|1456900_1457401_-	siphovirus Gp157 family protein	NA	A0A0E3U2R8	Fusobacterium_phage	35.5	3.8e-14
1462418:1462433	attR	TGTTATTGATGTGATC	NA	NA	NA	NA
>prophage 3
NZ_CP051640	Avibacterium paragallinarum strain ADL-AP07 chromosome, complete genome	2415993	1464270	1477280	2415993	integrase	Mannheimia_phage(33.33%)	21	1459317:1459331	1467497:1467511
1459317:1459331	attL	TTCTTTATTTGTAAA	NA	NA	NA	NA
WP_046097210.1|1464270_1465236_-|integrase	site-specific integrase	integrase	A8ATD6	Listeria_phage	39.0	3.6e-61
WP_051128146.1|1465468_1466176_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_017807508.1|1466156_1466414_-	hypothetical protein	NA	A0A2H4JCC5	uncultured_Caudovirales_phage	53.6	2.0e-11
WP_035660437.1|1466417_1466735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017806446.1|1466991_1467213_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017807323.1|1467227_1467398_+	DUF1508 domain-containing protein	NA	NA	NA	NA	NA
WP_035689374.1|1467696_1468701_-	hypothetical protein	NA	A0A0R6PIZ6	Moraxella_phage	24.4	3.8e-05
1467497:1467511	attR	TTCTTTATTTGTAAA	NA	NA	NA	NA
WP_035689371.1|1468945_1469308_-	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA	NA
WP_035689370.1|1469307_1469658_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A0M3LPZ2	Mannheimia_phage	42.1	6.2e-16
WP_035689367.1|1469983_1470268_-	DUF1364 domain-containing protein	NA	A0A0M3LQ97	Mannheimia_phage	80.6	2.0e-36
WP_052716788.1|1470268_1470904_-	DUF1367 family protein	NA	A0A2I7RNU5	Vibrio_phage	29.6	3.8e-19
WP_165381618.1|1471012_1471669_-	hypothetical protein	NA	A0A0M3LS65	Mannheimia_phage	42.2	4.4e-39
WP_035689420.1|1471692_1472499_-	helix-turn-helix domain-containing protein	NA	A5LH71	Enterobacteria_phage	62.0	3.3e-28
WP_046097539.1|1472495_1473266_-	phage antirepressor KilAC domain-containing protein	NA	D0UIL6	Aggregatibacter_phage	45.4	1.3e-45
WP_168939907.1|1473375_1473783_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017807328.1|1474288_1474495_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_017807327.1|1474632_1475286_+	helix-turn-helix domain-containing protein	NA	A0A0M3LSL8	Mannheimia_phage	70.1	1.0e-67
WP_017807326.1|1475285_1475771_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017807325.1|1475772_1476546_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_017807324.1|1476692_1476983_-	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	47.7	1.1e-13
WP_136711940.1|1476983_1477280_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	58.3	2.5e-26
>prophage 4
NZ_CP051640	Avibacterium paragallinarum strain ADL-AP07 chromosome, complete genome	2415993	1678963	1765794	2415993	transposase,capsid,plate,tRNA,terminase,tail,holin	Haemophilus_phage(23.94%)	105	NA	NA
WP_046097356.1|1678963_1679449_+|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	NA	NA	NA	NA
WP_035687040.1|1679644_1680790_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_017807042.1|1680804_1681608_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
WP_017807041.1|1681890_1682709_+	DNA ligase	NA	A0A1X9VNU1	Mimivirus	29.4	3.6e-30
WP_035687043.1|1683119_1684349_-	capsule biosynthesis protein	NA	NA	NA	NA	NA
WP_035687045.1|1684378_1686409_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_035695974.1|1686726_1688403_+	hypothetical protein	NA	NA	NA	NA	NA
WP_124994873.1|1688392_1689940_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.3	4.0e-22
WP_046097314.1|1689942_1690671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168939946.1|1691042_1692215_+	nucleotide sugar dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	56.2	1.6e-116
WP_168939947.1|1692204_1693641_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	37.8	1.2e-17
WP_035688629.1|1693747_1694914_+	polysaccharide export protein	NA	NA	NA	NA	NA
WP_046097312.1|1694923_1696066_+	capsule biosynthesis protein	NA	NA	NA	NA	NA
WP_035688630.1|1696065_1696863_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_035688632.1|1696859_1697507_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.7	1.9e-10
WP_124994912.1|1698179_1698431_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_035688634.1|1698927_1699554_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A218M2Y8	Acidovorax_phage	34.4	5.7e-12
WP_035688639.1|1699553_1699979_-	6-carboxytetrahydropterin synthase QueD	NA	A0A1U9WRB3	Streptococcus_virus	41.3	3.3e-19
WP_017807028.1|1699971_1700655_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	48.9	1.1e-53
WP_017807029.1|1700829_1701153_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_035685198.1|1702792_1704472_-|tail	tail fiber protein	tail	Q7Y5S2	Haemophilus_phage	36.3	1.5e-11
WP_017805938.1|1704481_1705096_-	DUF2612 domain-containing protein	NA	A0A0N9SSD8	Pseudomonas_phage	35.8	9.0e-18
WP_035685201.1|1705104_1706541_-|plate	baseplate J/gp47 family protein	plate	E5AGC3	Erwinia_phage	29.8	1.7e-43
WP_017805941.1|1706533_1706899_-	hypothetical protein	NA	D4N458	Pseudomonas_phage	36.9	1.1e-10
WP_017805942.1|1706895_1707567_-|plate	phage baseplate protein	plate	A0A0M5M1K7	Salmonella_phage	33.8	5.6e-21
WP_035685202.1|1707559_1708525_-	hypothetical protein	NA	M4SNA5	Psychrobacter_phage	30.9	3.5e-24
WP_017805944.1|1708502_1708835_-	hypothetical protein	NA	NA	NA	NA	NA
WP_168939948.1|1708942_1709785_-	phage antirepressor N-terminal domain-containing protein	NA	A0A0M3LR56	Mannheimia_phage	71.8	2.3e-48
WP_168939949.1|1710110_1711262_-	type I restriction endonuclease subunit R	NA	A0A1S5SAB0	Streptococcus_phage	30.3	6.2e-36
WP_035685204.1|1711393_1711987_-	hypothetical protein	NA	I3PGV3	Xanthomonas_phage	26.5	1.3e-08
WP_017805948.1|1712076_1712259_+	type II toxin-antitoxin system HicA family toxin	NA	A0A2H4JDU5	uncultured_Caudovirales_phage	47.5	1.4e-06
WP_017805949.1|1712302_1712722_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A2H4JFV9	uncultured_Caudovirales_phage	46.4	9.4e-27
WP_017805950.1|1712759_1715018_-	tape measure protein	NA	K7RVL7	Vibrio_phage	29.4	1.5e-33
WP_017805951.1|1715014_1715167_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017805952.1|1715202_1715688_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017805953.1|1715687_1716116_-	DUF3277 family protein	NA	A0A2H4P8K8	Pseudomonas_phage	38.3	4.6e-21
WP_017805954.1|1716167_1717241_-	DUF3383 family protein	NA	A0A0N9SJA3	Pseudomonas_phage	35.5	5.3e-66
WP_017805955.1|1717227_1717737_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017805956.1|1717738_1718098_-	hypothetical protein	NA	NA	NA	NA	NA
WP_035685207.1|1718097_1718556_-	hypothetical protein	NA	D0UII8	Aggregatibacter_phage	29.0	2.2e-08
WP_017805958.1|1718539_1718893_-	DUF4054 domain-containing protein	NA	NA	NA	NA	NA
WP_017805960.1|1719123_1720077_-	DUF2184 domain-containing protein	NA	A0A0N9SG07	Pseudomonas_phage	37.6	3.6e-50
WP_017805961.1|1720150_1720567_-	hypothetical protein	NA	NA	NA	NA	NA
WP_035685209.1|1720578_1721634_-	DUF2213 domain-containing protein	NA	E5AGA6	Erwinia_phage	40.5	3.9e-53
WP_017805963.1|1721721_1722156_-	hypothetical protein	NA	NA	NA	NA	NA
WP_035685212.1|1723278_1724586_-	DUF1073 domain-containing protein	NA	A0A2K9V3H1	Faecalibacterium_phage	31.4	3.3e-46
WP_046097305.1|1724588_1725938_-|terminase	PBSX family phage terminase large subunit	terminase	A0A220NQL3	Acinetobacter_phage	59.0	5.4e-148
WP_017806476.1|1725918_1726446_-|terminase	terminase small subunit	terminase	E5AGA2	Erwinia_phage	43.2	2.4e-19
WP_168939950.1|1726456_1726711_-	hypothetical protein	NA	A0A0M3LQ80	Mannheimia_phage	56.8	2.3e-20
WP_168939980.1|1726694_1726907_-	hypothetical protein	NA	NA	NA	NA	NA
WP_168939979.1|1726875_1727238_-	DUF2570 family protein	NA	NA	NA	NA	NA
WP_168939951.1|1727197_1727605_-	M15 family metallopeptidase	NA	W0LI70	Edwardsiella_phage	64.4	1.5e-45
WP_017807585.1|1727597_1727930_-|holin	phage holin, lambda family	holin	A0A2D1GNJ3	Pseudomonas_phage	36.8	4.1e-09
WP_130239081.1|1728084_1728402_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017807600.1|1728489_1729002_-	hypothetical protein	NA	NA	NA	NA	NA
WP_035689440.1|1729185_1729590_-	hypothetical protein	NA	NA	NA	NA	NA
WP_035689442.1|1729580_1730186_-	recombination protein NinG	NA	H6WRY9	Salmonella_phage	44.9	2.3e-34
WP_035689454.1|1730494_1731148_+	hypothetical protein	NA	D0UIM5	Aggregatibacter_phage	37.6	1.2e-31
WP_168939952.1|1731185_1731611_-	recombination protein NinB	NA	Q7Y5V7	Haemophilus_phage	62.1	3.5e-45
WP_103853787.1|1731600_1731828_-	hypothetical protein	NA	A0A0M3LR43	Mannheimia_phage	42.6	1.5e-07
WP_168939953.1|1731827_1732505_-	hypothetical protein	NA	A0A1P8DTF3	Proteus_phage	35.7	1.1e-27
WP_168939954.1|1732504_1733242_-	helix-turn-helix domain-containing protein	NA	D0UIL5	Aggregatibacter_phage	45.1	5.0e-47
WP_046097539.1|1733238_1734009_-	phage antirepressor KilAC domain-containing protein	NA	D0UIL6	Aggregatibacter_phage	45.4	1.3e-45
WP_082082238.1|1734118_1734526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_035689502.1|1734573_1734867_-	hypothetical protein	NA	Q7Y5W3	Haemophilus_phage	79.2	1.6e-36
WP_035689499.1|1734889_1735090_-	helix-turn-helix domain-containing protein	NA	Q76H55	Enterobacteria_phage	44.6	1.0e-07
WP_035689497.1|1735209_1735968_+	helix-turn-helix domain-containing protein	NA	Q76H56	Enterobacteria_phage	26.1	6.5e-18
WP_017807600.1|1736144_1736657_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046097541.1|1736922_1737465_-	hypothetical protein	NA	A0A127KNL4	Pseudomonas_phage	34.9	2.5e-19
WP_017807585.1|1737568_1737901_+|holin	phage holin, lambda family	holin	A0A2D1GNJ3	Pseudomonas_phage	36.8	4.1e-09
WP_168939951.1|1737893_1738301_+	M15 family metallopeptidase	NA	W0LI70	Edwardsiella_phage	64.4	1.5e-45
WP_168939979.1|1738260_1738623_+	DUF2570 family protein	NA	NA	NA	NA	NA
WP_168939980.1|1738591_1738804_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168939950.1|1738787_1739042_+	hypothetical protein	NA	A0A0M3LQ80	Mannheimia_phage	56.8	2.3e-20
WP_115615517.1|1739052_1739565_+|terminase	terminase small subunit	terminase	A0A0M3LSU1	Mannheimia_phage	59.8	1.2e-44
WP_046097804.1|1739545_1740895_+|terminase	PBSX family phage terminase large subunit	terminase	A0A220NQL3	Acinetobacter_phage	58.3	3.0e-143
WP_046097263.1|1740891_1742208_+	DUF1073 domain-containing protein	NA	D0UIJ6	Aggregatibacter_phage	52.8	5.1e-119
WP_168939955.1|1742128_1743526_+|capsid	minor capsid protein	capsid	Q7Y5U5	Haemophilus_phage	45.1	6.5e-56
WP_168939956.1|1743528_1743810_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168939957.1|1743877_1744999_+	DUF2213 domain-containing protein	NA	Q7Y5U2	Haemophilus_phage	60.2	7.0e-85
WP_017807108.1|1744998_1745451_+	hypothetical protein	NA	D0UIJ1	Aggregatibacter_phage	52.7	3.6e-32
WP_035688838.1|1745463_1746366_+	DUF2184 domain-containing protein	NA	Q7Y5U0	Haemophilus_phage	62.8	3.0e-102
WP_017807106.1|1746374_1746725_+	DUF4054 domain-containing protein	NA	Q7Y5T9	Haemophilus_phage	51.7	2.4e-23
WP_035688835.1|1746721_1747165_+	hypothetical protein	NA	Q7Y5T8	Haemophilus_phage	49.6	3.3e-30
WP_017807104.1|1747161_1747509_+	hypothetical protein	NA	Q776V7	Haemophilus_phage	47.9	4.0e-23
WP_051052690.1|1747432_1747945_+	hypothetical protein	NA	Q7Y5T6	Haemophilus_phage	50.6	1.0e-35
WP_168939958.1|1747948_1749451_+	DUF3383 domain-containing protein	NA	Q7Y5T5	Haemophilus_phage	74.9	3.9e-216
WP_017807101.1|1749460_1749889_+	DUF3277 family protein	NA	Q7Y5T4	Haemophilus_phage	78.2	7.3e-59
WP_017807100.1|1749891_1750317_+	hypothetical protein	NA	Q776V6	Haemophilus_phage	56.2	3.6e-34
WP_051128129.1|1750446_1752381_+|tail	phage tail tape measure protein	tail	D0UII2	Aggregatibacter_phage	48.2	4.7e-04
WP_035688832.1|1752383_1752731_-	helix-turn-helix transcriptional regulator	NA	A0A1S5NNJ5	Burkholderia_phage	55.3	8.1e-24
WP_081637560.1|1752714_1752969_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5NR91	Burkholderia_phage	55.8	1.4e-17
WP_035688830.1|1753036_1753798_+	hypothetical protein	NA	Q7Y5T0	Haemophilus_phage	53.5	3.0e-63
WP_035688827.1|1753801_1754104_+	hypothetical protein	NA	Q7Y5S9	Haemophilus_phage	56.8	6.1e-28
WP_082082221.1|1754079_1754919_+	replication initiation protein	NA	A0A1V0E006	Clostridioides_phage	35.7	2.2e-14
WP_103846642.1|1756103_1756952_+	hemin receptor	NA	NA	NA	NA	NA
WP_017806206.1|1756914_1757511_+	C39 family peptidase	NA	NA	NA	NA	NA
WP_017806205.1|1757513_1758221_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_035688856.1|1758567_1758894_+	hypothetical protein	NA	NA	NA	NA	NA
WP_130231609.1|1760064_1760901_+	hypothetical protein	NA	D0UIH8	Aggregatibacter_phage	71.5	3.7e-115
WP_081637559.1|1760897_1761545_+|plate	baseplate protein	plate	D0UIH7	Aggregatibacter_phage	60.8	7.6e-68
WP_081637558.1|1761541_1761892_+	hypothetical protein	NA	Q7Y5S5	Haemophilus_phage	66.7	8.6e-42
WP_035688818.1|1761942_1763073_+|plate	baseplate J/gp47 family protein	plate	Q7Y5S4	Haemophilus_phage	66.6	7.7e-140
WP_046097796.1|1763072_1763651_+	DUF2612 domain-containing protein	NA	D0UIH4	Aggregatibacter_phage	67.9	1.2e-72
WP_046097262.1|1763655_1765794_+|tail	tail fiber protein	tail	Q94MY0	Haemophilus_virus	37.1	7.6e-64
