assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_012849055.1_ASM1284905v1	NZ_CP051677	Spirosoma sp. CJU-R4 chromosome, complete genome	1	632706-632807	1	CRISPRCasFinder	no		WYL,DinG,csa3,PD-DExK,DEDDh,Cas9_archaeal,cas3	Orphan	CCCCTTCAGGGGGCTGGGGGTAA	23	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,PD-DExK,DEDDh,Cas9_archaeal,cas3	NA,NA|222aa|down_2|NZ_CP051677.1_634638_635304_+,NA|225aa|down_3|NZ_CP051677.1_635405_636080_-,NA|246aa|down_5|NZ_CP051677.1_637110_637848_+	NA|267aa|up_9|NZ_CP051677.1_623384_624185_+	cd10941, CE4_PuuE_HpPgdA_like_2, Putative catalytic domain of uncharacterized prokaryotic polysaccharide deacetylases similar to bacterial PuuE allantoinases and Helicobacter pylori peptidoglycan deacetylase (HpPgdA)	NA|110aa|up_8|NZ_CP051677.1_624253_624583_-	pfam05258, DUF721, Protein of unknown function (DUF721)	NA|359aa|up_7|NZ_CP051677.1_625067_626144_+	TIGR01392, Homoserine_O-acetyltransferase, homoserine O-acetyltransferase	NA|157aa|up_6|NZ_CP051677.1_626284_626755_+	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains	NA|152aa|up_5|NZ_CP051677.1_626781_627237_+	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains	NA|363aa|up_4|NZ_CP051677.1_627399_628488_-	cd00519, Lipase_3, Lipase (class 3)	NA|399aa|up_3|NZ_CP051677.1_628514_629711_-	TIGR03356, BGL, beta-galactosidase	NA|275aa|up_2|NZ_CP051677.1_629807_630632_-	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases	NA|292aa|up_1|NZ_CP051677.1_630757_631633_-	cd13964, PT_UbiA_1, UbiA family of prenyltransferases (PTases), Unknown subgroup	NA|288aa|up_0|NZ_CP051677.1_631660_632524_-	sd00006, TPR, Tetratricopeptide repeat	NA|311aa|down_0|NZ_CP051677.1_632816_633749_-	COG1099, COG1099, Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]	NA|240aa|down_1|NZ_CP051677.1_633909_634629_+	pfam13590, DUF4136, Domain of unknown function (DUF4136)	NA|222aa|down_2|NZ_CP051677.1_634638_635304_+	NA	NA|225aa|down_3|NZ_CP051677.1_635405_636080_-	NA	NA|301aa|down_4|NZ_CP051677.1_636109_637012_-	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC	NA|246aa|down_5|NZ_CP051677.1_637110_637848_+	NA	NA|406aa|down_6|NZ_CP051677.1_637934_639152_-	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]	NA|480aa|down_7|NZ_CP051677.1_639331_640771_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|252aa|down_8|NZ_CP051677.1_640773_641529_-	TIGR01200, conserved_hypothetical_protein, GLPGLI family protein	NA|436aa|down_9|NZ_CP051677.1_644853_646161_-	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]
GCF_012849055.1_ASM1284905v1	NZ_CP051677	Spirosoma sp. CJU-R4 chromosome, complete genome	2	3169605-3169709	2	CRISPRCasFinder	no		WYL,DinG,csa3,PD-DExK,DEDDh,Cas9_archaeal,cas3	Orphan	CCCTTCAGGGGGCTGGGGGGTAAAC	25	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,PD-DExK,DEDDh,Cas9_archaeal,cas3	NA|54aa|up_5|NZ_CP051677.1_3157242_3157404_+,NA|212aa|up_3|NZ_CP051677.1_3159758_3160394_-,NA	NA|275aa|up_9|NZ_CP051677.1_3154386_3155211_+	COG3618, COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|138aa|up_8|NZ_CP051677.1_3155427_3155841_+	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters	NA|353aa|up_7|NZ_CP051677.1_3155759_3156818_+	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters	NA|109aa|up_6|NZ_CP051677.1_3156819_3157146_+	pfam05336, rhaM, L-rhamnose mutarotase	NA|54aa|up_5|NZ_CP051677.1_3157242_3157404_+	NA	NA|718aa|up_4|NZ_CP051677.1_3157597_3159751_-	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|212aa|up_3|NZ_CP051677.1_3159758_3160394_-	NA	NA|162aa|up_2|NZ_CP051677.1_3160457_3160943_-	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|1035aa|up_1|NZ_CP051677.1_3161996_3165101_+	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|605aa|up_0|NZ_CP051677.1_3165114_3166929_+	pfam07980, SusD_RagB, SusD family	NA|560aa|down_0|NZ_CP051677.1_3169772_3171452_+	cd18617, GH43_XynB-like, Glycosyl hydrolase family 43, such as Bacteroides ovatus alpha-L-arabinofuranosidase (BoGH43, XynB)	NA|170aa|down_1|NZ_CP051677.1_3174097_3174607_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|518aa|down_2|NZ_CP051677.1_3174634_3176188_+	cd09001, GH43_FsAxh1-like, Glycosyl hydrolase family 43 such as Fibrobacter succinogenes subsp	NA|268aa|down_3|NZ_CP051677.1_3180925_3181729_+	pfam03629, SASA, Carbohydrate esterase, sialic acid-specific acetylesterase	NA|297aa|down_4|NZ_CP051677.1_3181754_3182645_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|521aa|down_5|NZ_CP051677.1_3182704_3184267_+	pfam00135, COesterase, Carboxylesterase family	NA|380aa|down_6|NZ_CP051677.1_3184314_3185454_+	cd11294, E_set_Esterase_like_N, N-terminal Early set domain associated with the catalytic domain of putative esterases	NA|390aa|down_7|NZ_CP051677.1_3185475_3186645_+	cd11294, E_set_Esterase_like_N, N-terminal Early set domain associated with the catalytic domain of putative esterases	NA|360aa|down_8|NZ_CP051677.1_3186656_3187736_+	COG2382, Fes, Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]	NA|373aa|down_9|NZ_CP051677.1_3187940_3189059_+	cd02858, E_set_Esterase_N, N-terminal Early set domain associated with the catalytic domain of esterase
GCF_012849055.1_ASM1284905v1	NZ_CP051677	Spirosoma sp. CJU-R4 chromosome, complete genome	3	3226591-3226698	3	CRISPRCasFinder	no		WYL,DinG,csa3,PD-DExK,DEDDh,Cas9_archaeal,cas3	Orphan	AATCATAGTCCATCAGCGTAATCA	24	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,PD-DExK,DEDDh,Cas9_archaeal,cas3	NA,NA|68aa|down_2|NZ_CP051677.1_3228999_3229203_-,NA|319aa|down_6|NZ_CP051677.1_3233364_3234321_+	NA|353aa|up_9|NZ_CP051677.1_3198979_3200038_-	pfam00331, Glyco_hydro_10, Glycosyl hydrolase family 10	NA|351aa|up_8|NZ_CP051677.1_3200236_3201289_-	cd18619, GH43_CoXyl43_like, Glycosyl hydrolase family 43 protein such as metagenomic beta-xylosidase/alpha-L-arabinofuranosidase CoXyl43	NA|268aa|up_7|NZ_CP051677.1_3201351_3202155_-	cd05233, SDR_c, classical (c) SDRs	NA|702aa|up_6|NZ_CP051677.1_3202155_3204261_-	COG3661, AguA, Alpha-glucuronidase [Carbohydrate transport and metabolism]	NA|961aa|up_5|NZ_CP051677.1_3204460_3207343_-	pfam15979, Glyco_hydro_115, Glycosyl hydrolase family 115	NA|342aa|up_4|NZ_CP051677.1_3207798_3208824_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|644aa|up_3|NZ_CP051677.1_3208916_3210848_+	COG2936, COG2936, Predicted acyl esterases [General function prediction only]	NA|403aa|up_2|NZ_CP051677.1_3211167_3212376_+	pfam13641, Glyco_tranf_2_3, Glycosyltransferase like family 2	NA|270aa|up_1|NZ_CP051677.1_3212595_3213405_+	pfam02321, OEP, Outer membrane efflux protein	NA|2274aa|up_0|NZ_CP051677.1_3215660_3222482_+	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|189aa|down_0|NZ_CP051677.1_3226727_3227294_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|481aa|down_1|NZ_CP051677.1_3227447_3228890_-	cd13127, MATE_tuaB_like, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins	NA|68aa|down_2|NZ_CP051677.1_3228999_3229203_-	NA	NA|695aa|down_3|NZ_CP051677.1_3229274_3231359_-	pfam02449, Glyco_hydro_42, Beta-galactosidase	NA|316aa|down_4|NZ_CP051677.1_3231420_3232368_-	pfam13585, CHU_C, C-terminal domain of CHU protein family	NA|216aa|down_5|NZ_CP051677.1_3232639_3233287_+	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism]	NA|319aa|down_6|NZ_CP051677.1_3233364_3234321_+	NA	NA|164aa|down_7|NZ_CP051677.1_3235398_3235890_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|393aa|down_8|NZ_CP051677.1_3235873_3237052_-	cd04950, GT4_TuaH-like, teichuronic acid biosynthesis glycosyltransferase TuaH and similar proteins	NA|497aa|down_9|NZ_CP051677.1_3237055_3238546_-	pfam04932, Wzy_C, O-Antigen ligase
GCF_012849055.1_ASM1284905v1	NZ_CP051677	Spirosoma sp. CJU-R4 chromosome, complete genome	4	3831576-3831812	1	PILER-CR	no		WYL,DinG,csa3,PD-DExK,DEDDh,Cas9_archaeal,cas3	Orphan	GGGGCGCTAGTAGTCCAGTGCTGACCAACTGCTCGTTTCTGGACAATTCATCTACA	56	0	0	NA	NA	NA	2	2	Orphan	WYL,DinG,csa3,PD-DExK,DEDDh,Cas9_archaeal,cas3	NA|53aa|up_4|NZ_CP051677.1_3818437_3818596_-,NA|350aa|up_0|NZ_CP051677.1_3825017_3826067_-,NA	NA|262aa|up_9|NZ_CP051677.1_3813714_3814500_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|103aa|up_8|NZ_CP051677.1_3814529_3814838_+	pfam14375, Cys_rich_CWC, Cysteine-rich CWC	NA|321aa|up_7|NZ_CP051677.1_3814834_3815797_-	PRK00142, PRK00142, rhodanese-related sulfurtransferase	NA|214aa|up_6|NZ_CP051677.1_3815853_3816495_+	COG1428, COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism]	NA|394aa|up_5|NZ_CP051677.1_3817256_3818438_-	cd01126, TraG_VirD4, The TraG/TraD/VirD4 family are bacterial conjugation proteins involved in type IV secretion	NA|53aa|up_4|NZ_CP051677.1_3818437_3818596_-	NA	NA|1178aa|up_3|NZ_CP051677.1_3818773_3822307_-	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain	NA|392aa|up_2|NZ_CP051677.1_3822324_3823500_-	pfam14054, DUF4249, Domain of unknown function (DUF4249)	NA|390aa|up_1|NZ_CP051677.1_3823715_3824885_-	TIGR03300, assembly_YfgL, outer membrane assembly lipoprotein YfgL	NA|350aa|up_0|NZ_CP051677.1_3825017_3826067_-	NA	NA|511aa|down_0|NZ_CP051677.1_3835005_3836538_+	cd16031, G6S_like, unchracterized sulfatase homologous to glucosamine (N-acetyl)-6-sulfatase(G6S, GNS)	NA|340aa|down_1|NZ_CP051677.1_3836664_3837684_+	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1	NA|879aa|down_2|NZ_CP051677.1_3837765_3840402_+	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]	NA|194aa|down_3|NZ_CP051677.1_3840839_3841421_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|369aa|down_4|NZ_CP051677.1_3841469_3842576_+	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms]	NA|1103aa|down_5|NZ_CP051677.1_3842669_3845978_+	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|576aa|down_6|NZ_CP051677.1_3845994_3847722_+	pfam07980, SusD_RagB, SusD family	NA|224aa|down_7|NZ_CP051677.1_3848060_3848732_+	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator	NA|454aa|down_8|NZ_CP051677.1_3848744_3850106_+	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|278aa|down_9|NZ_CP051677.1_3850777_3851611_+	COG3000, ERG3, Sterol desaturase [Lipid metabolism]
GCF_012849055.1_ASM1284905v1	NZ_CP051677	Spirosoma sp. CJU-R4 chromosome, complete genome	5	4562420-4562565	4	CRISPRCasFinder	no		WYL,DinG,csa3,PD-DExK,DEDDh,Cas9_archaeal,cas3	Orphan	TGAACTGTGATTCCCGCTGATTGCACTGATGGACTGTGATTACT	44	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,PD-DExK,DEDDh,Cas9_archaeal,cas3	NA|132aa|up_8|NZ_CP051677.1_4551824_4552220_+,NA|253aa|up_2|NZ_CP051677.1_4559676_4560435_+,NA	NA|261aa|up_9|NZ_CP051677.1_4550871_4551654_-	pfam02578, Cu-oxidase_4, Multi-copper polyphenol oxidoreductase laccase	NA|132aa|up_8|NZ_CP051677.1_4551824_4552220_+	NA	NA|504aa|up_7|NZ_CP051677.1_4552347_4553859_+	cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins	NA|85aa|up_6|NZ_CP051677.1_4554246_4554501_+	pfam02745, MCR_alpha_N, Methyl-coenzyme M reductase alpha subunit, N-terminal domain	NA|552aa|up_5|NZ_CP051677.1_4554584_4556240_+	TIGR02457, trehalose_synthase, trehalose synthase-fused probable maltokinase	NA|278aa|up_4|NZ_CP051677.1_4556405_4557239_+	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs	NA|654aa|up_3|NZ_CP051677.1_4557556_4559518_+	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|253aa|up_2|NZ_CP051677.1_4559676_4560435_+	NA	NA|321aa|up_1|NZ_CP051677.1_4560519_4561482_-	pfam04168, Alpha-E, A predicted alpha-helical domain with a conserved ER motif	NA|257aa|up_0|NZ_CP051677.1_4561630_4562401_+	pfam07978, NIPSNAP, NIPSNAP	NA|451aa|down_0|NZ_CP051677.1_4562750_4564103_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|631aa|down_1|NZ_CP051677.1_4564239_4566132_+	PRK14971, PRK14971, DNA polymerase III subunit gamma/tau	NA|232aa|down_2|NZ_CP051677.1_4567017_4567713_-	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|372aa|down_3|NZ_CP051677.1_4567893_4569009_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|422aa|down_4|NZ_CP051677.1_4569103_4570369_+	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|118aa|down_5|NZ_CP051677.1_4570380_4570734_+	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins	NA|133aa|down_6|NZ_CP051677.1_4570730_4571129_+	COG1895, COG1895, Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN [Function unknown]	NA|118aa|down_7|NZ_CP051677.1_4571160_4571514_+	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins	NA|128aa|down_8|NZ_CP051677.1_4571534_4571918_+	COG1895, COG1895, Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN [Function unknown]	NA|159aa|down_9|NZ_CP051677.1_4571914_4572391_+	pfam02542, YgbB, YgbB family
GCF_012849055.1_ASM1284905v1	NZ_CP051677	Spirosoma sp. CJU-R4 chromosome, complete genome	6	4681322-4681399	5	CRISPRCasFinder	no	csa3	WYL,DinG,csa3,PD-DExK,DEDDh,Cas9_archaeal,cas3	Type I-A	GTGTCAGGTCCCTGACCTGACAC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,PD-DExK,DEDDh,Cas9_archaeal,cas3	NA|133aa|up_9|NZ_CP051677.1_4670919_4671318_-,NA|223aa|up_7|NZ_CP051677.1_4672321_4672990_+,NA	NA|133aa|up_9|NZ_CP051677.1_4670919_4671318_-	NA	NA|286aa|up_8|NZ_CP051677.1_4671356_4672214_-	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|223aa|up_7|NZ_CP051677.1_4672321_4672990_+	NA	NA|94aa|up_6|NZ_CP051677.1_4673016_4673298_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|126aa|up_5|NZ_CP051677.1_4673485_4673863_+	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains	NA|178aa|up_4|NZ_CP051677.1_4674366_4674900_-	pfam08448, PAS_4, PAS fold	NA|322aa|up_3|NZ_CP051677.1_4675098_4676064_-	COG0685, MetF, 5,10-methylenetetrahydrofolate reductase [Amino acid transport and metabolism]	NA|324aa|up_2|NZ_CP051677.1_4676364_4677336_+	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR)	NA|273aa|up_1|NZ_CP051677.1_4677336_4678155_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|1042aa|up_0|NZ_CP051677.1_4678170_4681296_-	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism]	NA|363aa|down_0|NZ_CP051677.1_4681432_4682521_-	pfam16576, HlyD_D23, Barrel-sandwich domain of CusB or HlyD membrane-fusion	NA|423aa|down_1|NZ_CP051677.1_4682790_4684059_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|400aa|down_2|NZ_CP051677.1_4684191_4685391_-	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters	NA|104aa|down_3|NZ_CP051677.1_4685635_4685947_+	pfam06724, DUF1206, Domain of Unknown Function (DUF1206)	NA|195aa|down_4|NZ_CP051677.1_4685874_4686459_+	pfam06724, DUF1206, Domain of Unknown Function (DUF1206)	NA|192aa|down_5|NZ_CP051677.1_4686682_4687258_-	pfam07883, Cupin_2, Cupin domain	NA|456aa|down_6|NZ_CP051677.1_4687503_4688871_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|232aa|down_7|NZ_CP051677.1_4688867_4689563_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|473aa|down_8|NZ_CP051677.1_4689610_4691029_-	pfam14052, Caps_assemb_Wzi, Capsule assembly protein Wzi	NA|146aa|down_9|NZ_CP051677.1_4691456_4691894_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein
GCF_012849055.1_ASM1284905v1	NZ_CP051677	Spirosoma sp. CJU-R4 chromosome, complete genome	7	5551946-5552039	6	CRISPRCasFinder	no		WYL,DinG,csa3,PD-DExK,DEDDh,Cas9_archaeal,cas3	Orphan	AATCAAAAAATCAAAAAAATCACAGTTCA	29	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,PD-DExK,DEDDh,Cas9_archaeal,cas3	NA,NA|126aa|down_6|NZ_CP051677.1_5565306_5565684_+,NA|134aa|down_8|NZ_CP051677.1_5566400_5566802_-,NA|69aa|down_9|NZ_CP051677.1_5566833_5567040_-	NA|109aa|up_9|NZ_CP051677.1_5543114_5543441_-	COG2929, COG2929, Uncharacterized protein conserved in bacteria [Function unknown]	NA|416aa|up_8|NZ_CP051677.1_5543492_5544740_-	PRK05469, PRK05469, tripeptide aminopeptidase PepT	NA|158aa|up_7|NZ_CP051677.1_5544746_5545220_-	cd11530, NTP-PPase_DR2231_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|131aa|up_6|NZ_CP051677.1_5545407_5545800_-	TIGR04256, conserved_hypothetical_protein, GxxExxY protein	NA|192aa|up_5|NZ_CP051677.1_5546075_5546651_-	COG2095, MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion]	NA|344aa|up_4|NZ_CP051677.1_5546688_5547720_-	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]	NA|141aa|up_3|NZ_CP051677.1_5547819_5548242_-	pfam01220, DHquinase_II, Dehydroquinase class II	NA|302aa|up_2|NZ_CP051677.1_5548366_5549272_+	TIGR02225, Tyrosine_recombinase_XerD, tyrosine recombinase XerD	NA|271aa|up_1|NZ_CP051677.1_5549602_5550415_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|451aa|up_0|NZ_CP051677.1_5550411_5551764_+	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	NA|151aa|down_0|NZ_CP051677.1_5552085_5552538_+	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional	NA|214aa|down_1|NZ_CP051677.1_5552644_5553286_+	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|802aa|down_2|NZ_CP051677.1_5553372_5555778_+	cd16894, MltD-like, Membrane-bound lytic murein transglycosylase D and similar proteins	NA|129aa|down_3|NZ_CP051677.1_5558810_5559197_+	cd17546, REC_hyHK_CKI1_RcsC-like, phosphoacceptor receiver (REC) domain of hybrid sensor histidine kinases/response regulators similar to Arabidopsis thaliana CKI1 and Escherichia coli RcsC	NA|286aa|down_4|NZ_CP051677.1_5559590_5560448_+	pfam06283, ThuA, Trehalose utilisation	NA|124aa|down_5|NZ_CP051677.1_5560500_5560872_+	pfam11954, DUF3471, Domain of unknown function (DUF3471)	NA|126aa|down_6|NZ_CP051677.1_5565306_5565684_+	NA	NA|192aa|down_7|NZ_CP051677.1_5565766_5566342_+	pfam11307, DUF3109, Protein of unknown function (DUF3109)	NA|134aa|down_8|NZ_CP051677.1_5566400_5566802_-	NA	NA|69aa|down_9|NZ_CP051677.1_5566833_5567040_-	NA
GCF_012849055.1_ASM1284905v1	NZ_CP051678	Spirosoma sp. CJU-R4 plasmid unnamed1, complete sequence	1	121159-121255	1	CRISPRCasFinder	no		PD-DExK	Orphan	GTTTGAGCCTCACCTTCTAATACCTTACT	29	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,csa3,PD-DExK,DEDDh,Cas9_archaeal,cas3	NA|295aa|up_8|NZ_CP051678.1_107332_108217_+,NA|373aa|up_5|NZ_CP051678.1_111907_113026_-,NA|112aa|up_1|NZ_CP051678.1_115996_116332_-,NA	NA|304aa|up_9|NZ_CP051678.1_105897_106809_-	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal	NA|295aa|up_8|NZ_CP051678.1_107332_108217_+	NA	NA|171aa|up_7|NZ_CP051678.1_108683_109196_+	pfam09970, DUF2204, Nucleotidyl transferase of unknown function (DUF2204)	NA|510aa|up_6|NZ_CP051678.1_109890_111420_-	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]	NA|373aa|up_5|NZ_CP051678.1_111907_113026_-	NA	NA|211aa|up_4|NZ_CP051678.1_113022_113655_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|185aa|up_3|NZ_CP051678.1_114114_114669_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|287aa|up_2|NZ_CP051678.1_114708_115569_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|112aa|up_1|NZ_CP051678.1_115996_116332_-	NA	NA|369aa|up_0|NZ_CP051678.1_116661_117768_+	pfam04773, FecR, FecR protein	NA|486aa|down_0|NZ_CP051678.1_121267_122725_+	cd08977, SusD, starch binding outer membrane protein SusD	NA|834aa|down_1|NZ_CP051678.1_122889_125391_+	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]	NA|195aa|down_2|NZ_CP051678.1_125675_126260_+	TIGR02985, Sig70_bacteroi1, RNA polymerase sigma-70 factor, Bacteroides expansion family 1	NA|126aa|down_3|NZ_CP051678.1_126588_126966_-	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains	NA|152aa|down_4|NZ_CP051678.1_127368_127824_-	pfam03713, DUF305, Domain of unknown function (DUF305)	NA|69aa|down_5|NZ_CP051678.1_128246_128453_-	cd14675, PH-SEC3_like, PH-like domain of Sec3-like protein	NA|183aa|down_6|NZ_CP051678.1_128707_129256_-	PRK12519, PRK12519, RNA polymerase sigma factor; Provisional	NA|71aa|down_7|NZ_CP051678.1_130410_130623_+	pfam13276, HTH_21, HTH-like domain	NA|61aa|down_8|NZ_CP051678.1_130911_131094_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|304aa|down_9|NZ_CP051678.1_138683_139595_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]
