assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_012848655.1_ASM1284865v1	NZ_CP051649	Lactobacillus acetotolerans strain LJ49 chromosome, complete genome	1	684674-685375	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas14j,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh	cas3,cas14j,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,WYL,DinG	Type I-E	GTATTCTCCACGTATGTGGAGGTGATCCT,GTATTCTCCACGTATGTGGAGGTGATCCT,GTATTCTCCACGTATGTGGAGGTGATCCT	29,29,29	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	10,10,11	11	TypeV,TypeI-E	cas3,cas14j,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,WYL,DinG	NA|48aa|up_1|NZ_CP051649.1_683079_683223_+,NA	NA|180aa|up_9|NZ_CP051649.1_673891_674431_+	TIGR03263, Guanylate_kinase, guanylate kinase	NA|166aa|up_8|NZ_CP051649.1_674621_675119_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|245aa|up_7|NZ_CP051649.1_675340_676075_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|306aa|up_6|NZ_CP051649.1_676255_677173_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|137aa|up_5|NZ_CP051649.1_678596_679007_+	pfam01797, Y1_Tnp, Transposase IS200 like	cas14j|440aa|up_4|NZ_CP051649.1_679039_680359_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|363aa|up_3|NZ_CP051649.1_680490_681579_-	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins	NA|428aa|up_2|NZ_CP051649.1_681595_682879_-	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|48aa|up_1|NZ_CP051649.1_683079_683223_+	NA	NA|393aa|up_0|NZ_CP051649.1_683271_684450_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|454aa|down_0|NZ_CP051649.1_685493_686855_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|300aa|down_1|NZ_CP051649.1_687441_688341_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|607aa|down_2|NZ_CP051649.1_688459_690280_+	TIGR01813, Fumarate_reductase_flavoprotein_subunit, flavocytochrome c	cas3|912aa|down_3|NZ_CP051649.1_691939_694675_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|582aa|down_4|NZ_CP051649.1_694646_696392_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|198aa|down_5|NZ_CP051649.1_696392_696986_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|377aa|down_6|NZ_CP051649.1_696996_698127_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|240aa|down_7|NZ_CP051649.1_698107_698827_+	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|209aa|down_8|NZ_CP051649.1_698826_699453_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|313aa|down_9|NZ_CP051649.1_699449_700388_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI
GCF_012848655.1_ASM1284865v1	NZ_CP051649	Lactobacillus acetotolerans strain LJ49 chromosome, complete genome	2	690336-691827	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas14j,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh	cas3,cas14j,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,WYL,DinG	Type I-E	GTATTCTCCACGTATGTGGAGGTGATCCT,GTATTCTCCACGTATGTGGAGGTGATCCT,GTATTCTCCACGTATGTGGAGGTGATCC	29,29,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	23,24,22	24	TypeV,TypeI-E	cas3,cas14j,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,WYL,DinG	NA|48aa|up_4|NZ_CP051649.1_683079_683223_+,NA	NA|306aa|up_9|NZ_CP051649.1_676255_677173_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|137aa|up_8|NZ_CP051649.1_678596_679007_+	pfam01797, Y1_Tnp, Transposase IS200 like	cas14j|440aa|up_7|NZ_CP051649.1_679039_680359_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|363aa|up_6|NZ_CP051649.1_680490_681579_-	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins	NA|428aa|up_5|NZ_CP051649.1_681595_682879_-	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|48aa|up_4|NZ_CP051649.1_683079_683223_+	NA	NA|393aa|up_3|NZ_CP051649.1_683271_684450_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|454aa|up_2|NZ_CP051649.1_685493_686855_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|300aa|up_1|NZ_CP051649.1_687441_688341_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|607aa|up_0|NZ_CP051649.1_688459_690280_+	TIGR01813, Fumarate_reductase_flavoprotein_subunit, flavocytochrome c	cas3|912aa|down_0|NZ_CP051649.1_691939_694675_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|582aa|down_1|NZ_CP051649.1_694646_696392_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|198aa|down_2|NZ_CP051649.1_696392_696986_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|377aa|down_3|NZ_CP051649.1_696996_698127_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|240aa|down_4|NZ_CP051649.1_698107_698827_+	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|209aa|down_5|NZ_CP051649.1_698826_699453_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|313aa|down_6|NZ_CP051649.1_699449_700388_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	DEDDh|294aa|down_7|NZ_CP051649.1_700384_701266_+	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|161aa|down_8|NZ_CP051649.1_702680_703163_+	PRK04302, PRK04302, triosephosphate isomerase; Provisional	NA|173aa|down_9|NZ_CP051649.1_703176_703695_+	pfam01894, UPF0047, Uncharacterized protein family UPF0047
GCF_012848655.1_ASM1284865v1	NZ_CP051649	Lactobacillus acetotolerans strain LJ49 chromosome, complete genome	3	701296-702606	3,3,3,4	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh	cas3,cas14j,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,WYL,DinG	Type I-E	GTATTCTCCACGTATGTGGAGGTGATCCT,GTATTCTCCACGTATGTGGAGGTGATCCT,TGTATTCTCCACGTATGTGGAGGTGATCCTTA,GTATTCTCCACGTATGTGGAGGTGATCC	29,29,32,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	20,21,16,16	21	TypeI-E	cas3,cas14j,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,WYL,DinG	NA,NA	NA|300aa|up_9|NZ_CP051649.1_687441_688341_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|607aa|up_8|NZ_CP051649.1_688459_690280_+	TIGR01813, Fumarate_reductase_flavoprotein_subunit, flavocytochrome c	cas3|912aa|up_7|NZ_CP051649.1_691939_694675_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|582aa|up_6|NZ_CP051649.1_694646_696392_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|198aa|up_5|NZ_CP051649.1_696392_696986_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|377aa|up_4|NZ_CP051649.1_696996_698127_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|240aa|up_3|NZ_CP051649.1_698107_698827_+	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|209aa|up_2|NZ_CP051649.1_698826_699453_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|313aa|up_1|NZ_CP051649.1_699449_700388_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	DEDDh|294aa|up_0|NZ_CP051649.1_700384_701266_+	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|161aa|down_0|NZ_CP051649.1_702680_703163_+	PRK04302, PRK04302, triosephosphate isomerase; Provisional	NA|173aa|down_1|NZ_CP051649.1_703176_703695_+	pfam01894, UPF0047, Uncharacterized protein family UPF0047	NA|365aa|down_2|NZ_CP051649.1_704256_705351_-	pfam01757, Acyl_transf_3, Acyltransferase family	NA|303aa|down_3|NZ_CP051649.1_705482_706391_+	cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases	NA|419aa|down_4|NZ_CP051649.1_708627_709884_+	COG4640, COG4640, Predicted membrane protein [Function unknown]	NA|250aa|down_5|NZ_CP051649.1_710025_710775_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|600aa|down_6|NZ_CP051649.1_710784_712584_+	pfam02687, FtsX, FtsX-like permease family	NA|216aa|down_7|NZ_CP051649.1_712633_713281_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|231aa|down_8|NZ_CP051649.1_713307_714000_-	cd04268, ZnMc_MMP_like, Zinc-dependent metalloprotease, MMP_like subfamily	NA|765aa|down_9|NZ_CP051649.1_714151_716446_+	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only]
GCF_012848655.1_ASM1284865v1	NZ_CP051649	Lactobacillus acetotolerans strain LJ49 chromosome, complete genome	4	706621-707316	5,4,4	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh	cas3,cas14j,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,WYL,DinG	Type I-E	GTTTTAGATGATTGTTAGATCAATGAGGTTTAGACC,GTTTTAGATGATTGTTAGATCAATGAGGTTTAGACC,GTTTTAGATGATTGTTAGATCAATGAGGTTTAGA	36,36,34	0	0	NA	NA	NA:NA:NA	9,10,10	10	TypeI-E	cas3,cas14j,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,WYL,DinG	NA,NA	cse2gr11|198aa|up_9|NZ_CP051649.1_696392_696986_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|377aa|up_8|NZ_CP051649.1_696996_698127_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|240aa|up_7|NZ_CP051649.1_698107_698827_+	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|209aa|up_6|NZ_CP051649.1_698826_699453_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|313aa|up_5|NZ_CP051649.1_699449_700388_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	DEDDh|294aa|up_4|NZ_CP051649.1_700384_701266_+	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|161aa|up_3|NZ_CP051649.1_702680_703163_+	PRK04302, PRK04302, triosephosphate isomerase; Provisional	NA|173aa|up_2|NZ_CP051649.1_703176_703695_+	pfam01894, UPF0047, Uncharacterized protein family UPF0047	NA|365aa|up_1|NZ_CP051649.1_704256_705351_-	pfam01757, Acyl_transf_3, Acyltransferase family	NA|303aa|up_0|NZ_CP051649.1_705482_706391_+	cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases	NA|419aa|down_0|NZ_CP051649.1_708627_709884_+	COG4640, COG4640, Predicted membrane protein [Function unknown]	NA|250aa|down_1|NZ_CP051649.1_710025_710775_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|600aa|down_2|NZ_CP051649.1_710784_712584_+	pfam02687, FtsX, FtsX-like permease family	NA|216aa|down_3|NZ_CP051649.1_712633_713281_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|231aa|down_4|NZ_CP051649.1_713307_714000_-	cd04268, ZnMc_MMP_like, Zinc-dependent metalloprotease, MMP_like subfamily	NA|765aa|down_5|NZ_CP051649.1_714151_716446_+	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only]	NA|216aa|down_6|NZ_CP051649.1_716880_717528_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|207aa|down_7|NZ_CP051649.1_717539_718160_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|274aa|down_8|NZ_CP051649.1_718162_718984_+	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily	NA|137aa|down_9|NZ_CP051649.1_719028_719439_+	COG2153, ElaA, Predicted acyltransferase [General function prediction only]
