The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP051004	Streptococcus agalactiae 515 chromosome, complete genome	2032743	40619	48606	2032743		Synechococcus_phage(33.33%)	7	NA	NA
WP_000220683.1|40619_42074_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.5	1.4e-53
WP_001291337.1|42101_43124_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.4	1.2e-62
WP_000686116.1|43291_43855_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	1.8e-25
WP_000183891.1|43873_44494_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000197236.1|44512_46063_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	48.9	1.1e-77
WP_001045908.1|46255_47155_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A221J6U0	Arthrobacter_phage	45.9	4.1e-19
WP_000783422.1|47301_48606_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A2D1GNZ3	Streptomyces_phage	40.5	1.7e-05
>prophage 2
NZ_CP051004	Streptococcus agalactiae 515 chromosome, complete genome	2032743	560190	608236	2032743	portal,tail,integrase,transposase,terminase,holin,protease,capsid,head	Streptococcus_phage(71.43%)	77	560132:560149	602982:602999
560132:560149	attL	GATTCCGGCAGGGGACAT	NA	NA	NA	NA
WP_000264730.1|560190_561270_-|integrase	site-specific integrase	integrase	A0A1X9IGD8	Lactococcus_phage	39.8	3.2e-63
WP_001867243.1|561235_561403_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000742866.1|561393_562008_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000095652.1|562139_562919_-	helix-turn-helix transcriptional regulator	NA	M1NS52	Streptococcus_phage	78.9	3.1e-108
WP_000364978.1|563279_563573_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A1X9I661	Streptococcus_phage	76.7	1.0e-35
WP_001097075.1|563556_563727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001104157.1|563784_563943_+	hypothetical protein	NA	J7KH24	Streptococcus_phage	96.2	2.0e-22
WP_000219235.1|563973_564216_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000880594.1|564201_564759_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001247539.1|564814_565024_+	hypothetical protein	NA	A0A097PAQ9	Streptococcus_pyogenes_phage	97.1	8.2e-32
WP_000164462.1|565255_565462_+	helix-turn-helix transcriptional regulator	NA	A0A1S5SFQ0	Streptococcus_phage	72.1	8.4e-21
WP_001156316.1|565515_566475_+	hypothetical protein	NA	A0A286QS27	Streptococcus_phage	55.8	1.6e-90
WP_000032141.1|566467_566977_+	hypothetical protein	NA	J7KJY1	Streptococcus_phage	98.2	2.5e-82
WP_000627309.1|567009_567147_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001867241.1|567273_567420_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001000651.1|567382_567691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000879943.1|567796_568027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000431178.1|568164_568389_+	hypothetical protein	NA	J7KBY5	Streptococcus_phage	95.9	1.7e-35
WP_000774716.1|568399_569260_+	DnaD domain protein	NA	J7KBV5	Streptococcus_phage	85.5	5.6e-58
WP_000371783.1|569240_569474_+	hypothetical protein	NA	Q938N1	Temperate_phage	94.8	8.0e-36
WP_000166038.1|569470_569611_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000229417.1|569621_569876_+	hypothetical protein	NA	J7KK18	Streptococcus_phage	79.8	1.1e-30
WP_001001351.1|569878_570040_+	hypothetical protein	NA	J7KDI4	Streptococcus_phage	84.9	5.2e-18
WP_000323862.1|570040_570523_+	siphovirus Gp157 family protein	NA	A0A1P8VVS5	Streptococcus_phage	70.0	1.3e-51
WP_000063051.1|570523_571198_+	essential recombination function protein	NA	A0A097PBE8	Streptococcus_pyogenes_phage	92.4	9.0e-112
WP_000609374.1|571190_571607_+	single-stranded DNA-binding protein	NA	Q938M7	Temperate_phage	83.5	1.2e-58
WP_000165748.1|571609_571810_+	hypothetical protein	NA	J7KIX6	Streptococcus_phage	88.1	9.6e-22
WP_001009815.1|571799_572288_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A2P0VJL6	Streptococcus_phage	63.3	8.9e-53
WP_001004391.1|572268_572613_+	hypothetical protein	NA	J7KK12	Streptococcus_phage	74.3	9.1e-44
WP_000763914.1|572624_572921_+	DUF1599 domain-containing protein	NA	J7KBY0	Streptococcus_phage	99.0	3.1e-48
WP_000150115.1|572904_573144_+	hypothetical protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	55.6	7.5e-05
WP_000159368.1|573174_573339_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000139628.1|573335_573605_+	hypothetical protein	NA	A7J287	Streptococcus_phage	69.7	1.8e-23
WP_000564605.1|573608_573752_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001019149.1|573748_574261_+	DUF1642 domain-containing protein	NA	A0A097PAV5	Streptococcus_pyogenes_phage	46.0	2.7e-28
WP_001105090.1|574281_574581_+	hypothetical protein	NA	M1PFH6	Streptococcus_phage	45.4	1.3e-17
WP_000221696.1|574768_574963_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000660741.1|574959_575226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000142570.1|575616_576051_+	ArpU family transcriptional regulator	NA	J7KDQ1	Streptococcus_phage	95.1	6.5e-71
WP_000915467.1|576713_577622_+	hypothetical protein	NA	A0A126HDT5	Lactococcus_phage	62.6	3.8e-97
WP_000964195.1|577674_578052_-	HicB family protein	NA	I3NLB2	Bifidobacterium_phage	41.3	1.5e-15
WP_001867670.1|578104_578245_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA	NA
WP_000687301.1|578401_578719_+	HNH endonuclease	NA	A3F639	Streptococcus_phage	69.1	1.1e-30
WP_000343900.1|578855_579212_+	hypothetical protein	NA	A0A2H4JAH7	uncultured_Caudovirales_phage	61.0	3.0e-34
WP_000628069.1|579208_580852_+|terminase	terminase large subunit	terminase	A0A1S5SF58	Streptococcus_phage	80.6	4.8e-268
WP_000764511.1|580862_581186_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000696092.1|581257_582406_+|portal	phage portal protein	portal	A0A1S5SFG8	Streptococcus_phage	53.0	8.7e-107
WP_000192152.1|582386_583118_+|protease	Clp protease ClpP	protease	A0A1S5SFF8	Streptococcus_phage	61.5	1.4e-73
WP_000178057.1|583139_584300_+|capsid	phage major capsid protein	capsid	A0A1S5SFB4	Streptococcus_phage	57.6	3.6e-116
WP_000343312.1|584303_584597_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JAA9	uncultured_Caudovirales_phage	42.5	9.5e-10
WP_000868405.1|584568_584718_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000087630.1|584710_585058_+	hypothetical protein	NA	A3F648	Streptococcus_phage	55.7	3.7e-29
WP_032457488.1|585082_585454_+	hypothetical protein	NA	A3F649	Streptococcus_phage	78.9	3.4e-52
WP_000237791.1|585446_585827_+	hypothetical protein	NA	A3F650	Streptococcus_phage	64.3	1.8e-40
WP_001149164.1|585841_586447_+|tail	tail protein	tail	A3F651	Streptococcus_phage	73.5	3.4e-70
WP_001281299.1|586457_586760_+	hypothetical protein	NA	A3F652	Streptococcus_phage	69.4	7.5e-34
WP_001051904.1|586986_590910_+|tail	phage tail tape measure protein	tail	J7KDT4	Streptococcus_phage	65.0	0.0e+00
WP_000666986.1|590921_592430_+	hypothetical protein	NA	J7KH53	Streptococcus_phage	76.5	6.5e-227
WP_000260411.1|592420_596554_+	CHAP domain-containing protein	NA	J7KBT9	Streptococcus_phage	80.7	0.0e+00
WP_000206876.1|596554_598546_+	hypothetical protein	NA	J7KC14	Streptococcus_phage	79.5	1.5e-303
WP_000404431.1|598559_598886_+	DUF1366 domain-containing protein	NA	J7KDI9	Streptococcus_phage	68.2	1.3e-31
WP_000698337.1|598860_599073_+	hypothetical protein	NA	J7KDP6	Streptococcus_phage	60.0	2.1e-14
WP_000215499.1|599085_599388_+	hypothetical protein	NA	X2KT07	Streptococcus_phage	59.6	2.2e-25
WP_001001742.1|599389_599725_+|holin	phage holin	holin	A0A1P8VVK6	Streptococcus_phage	71.2	6.8e-36
WP_000236381.1|599726_600446_+	CHAP domain-containing protein	NA	A0A1U9WRD0	Streptococcus_virus	72.1	1.6e-58
WP_000812952.1|600778_601750_+	Abi family protein	NA	A0A059NT88	Lactococcus_phage	42.6	1.3e-74
WP_000076715.1|601853_602054_+	CsbD family protein	NA	J7KJ36	Streptococcus_phage	87.9	9.6e-22
WP_000356856.1|602094_602265_-	hypothetical protein	NA	A0A286QNA2	Streptococcus_phage	63.8	1.1e-07
WP_000965642.1|602681_602861_+	hypothetical protein	NA	J7KIW4	Streptococcus_phage	86.2	2.1e-20
WP_001872365.1|603566_603833_-	hypothetical protein	NA	Q77YW7	Streptococcus_phage	65.2	9.2e-20
602982:602999	attR	GATTCCGGCAGGGGACAT	NA	NA	NA	NA
WP_000640620.1|603832_604237_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001122305.1|604398_604599_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_001865698.1|604620_604881_+|transposase	IS3 family transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	43.0	3.4e-11
WP_001867107.1|605006_605216_+|transposase	transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	55.4	1.4e-15
WP_000508795.1|605388_605550_-	NINE protein	NA	NA	NA	NA	NA
WP_000594361.1|606292_607570_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000353149.1|607579_608236_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.8	2.2e-22
>prophage 3
NZ_CP051004	Streptococcus agalactiae 515 chromosome, complete genome	2032743	1461774	1472507	2032743		Streptococcus_phage(84.62%)	14	NA	NA
WP_000767486.1|1461774_1462602_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	78.0	1.1e-124
WP_000287943.1|1462642_1462999_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	72.6	5.2e-42
WP_000966768.1|1463000_1463477_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	50.3	1.1e-36
WP_000232154.1|1463532_1464714_-	phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	75.3	9.1e-168
WP_001198082.1|1464775_1465324_-	GNAT family acetyltransferase	NA	M1PSC3	Streptococcus_phage	57.9	1.4e-54
WP_000158397.1|1465392_1466484_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	78.0	3.9e-165
WP_000603271.1|1466616_1467252_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_001867099.1|1467521_1468385_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	70.4	3.1e-109
WP_000358198.1|1468390_1468717_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	61.1	3.2e-30
WP_000364567.1|1468747_1469611_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	49.7	4.7e-73
WP_000715592.1|1469630_1470266_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	61.1	2.8e-67
WP_001144242.1|1470354_1471014_-	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	56.5	8.0e-65
WP_000178150.1|1471032_1471743_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.5	4.7e-18
WP_001185985.1|1471742_1472507_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.8	2.6e-14
>prophage 4
NZ_CP051004	Streptococcus agalactiae 515 chromosome, complete genome	2032743	1782330	1802301	2032743	integrase	Streptococcus_phage(94.74%)	21	1773422:1773436	1788024:1788038
1773422:1773436	attL	TAATATTGAAAATAA	NA	NA	NA	NA
WP_000237872.1|1782330_1784547_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	U5J9N6	Bacillus_phage	38.3	3.7e-13
WP_001291561.1|1784778_1785996_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000814511.1|1786077_1786281_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_000857133.1|1786741_1786972_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000804885.1|1786968_1787391_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_001227347.1|1787895_1788249_+	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
1788024:1788038	attR	TAATATTGAAAATAA	NA	NA	NA	NA
WP_000336323.1|1788308_1788476_-	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_000691727.1|1788594_1790514_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	100.0	0.0e+00
WP_001791010.1|1790529_1790646_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_001224319.1|1790890_1791823_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	1.1e-171
WP_000769868.1|1791819_1792821_-	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_000804748.1|1792817_1794995_-	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000331160.1|1794997_1797445_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000506270.1|1797428_1797935_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000342539.1|1797909_1798407_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_001009056.1|1798523_1798745_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000398284.1|1798787_1799993_-	replication initiation factor	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_000879507.1|1800015_1800168_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000813488.1|1800170_1801556_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000985015.1|1801584_1801971_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000420682.1|1801986_1802301_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
>prophage 5
NZ_CP051004	Streptococcus agalactiae 515 chromosome, complete genome	2032743	2002012	2009216	2032743		Staphylococcus_phage(33.33%)	8	NA	NA
WP_001042655.1|2002012_2002717_-	transglycosylase SLT domain-containing protein	NA	A0A2H4J6C5	uncultured_Caudovirales_phage	56.6	4.2e-27
WP_000029068.1|2002822_2003362_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	45.8	6.7e-17
WP_000359358.1|2003577_2004372_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000510606.1|2004364_2005207_-	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	28.5	2.0e-15
WP_000181757.1|2005182_2006022_-	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	26.3	1.0e-16
WP_000976003.1|2006021_2006564_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_000217754.1|2006686_2007970_-	insulinase family protein	NA	A0A2H4UVM3	Bodo_saltans_virus	23.6	2.2e-05
WP_000706188.1|2007971_2009216_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	41.3	3.7e-87
