assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_012516455.1_ASM1251645v1	NZ_CP051219	Escherichia coli strain SFE8 chromosome, complete genome	1	632705-632822	1	CRISPRCasFinder	no		cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	Orphan	TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	40	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	NA,NA|55aa|down_0|NZ_CP051219.1_632895_633060_-	NA|115aa|up_9|NZ_CP051219.1_620426_620771_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|up_8|NZ_CP051219.1_620959_621898_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|up_7|NZ_CP051219.1_621996_622986_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|up_6|NZ_CP051219.1_623007_624339_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|up_5|NZ_CP051219.1_624364_625573_+	PRK12379, PRK12379, propionate kinase	NA|765aa|up_4|NZ_CP051219.1_625606_627901_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|up_3|NZ_CP051219.1_627914_628304_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|up_2|NZ_CP051219.1_628375_629740_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|up_1|NZ_CP051219.1_630014_631346_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|437aa|up_0|NZ_CP051219.1_631373_632684_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|55aa|down_0|NZ_CP051219.1_632895_633060_-	NA	NA|234aa|down_1|NZ_CP051219.1_633082_633784_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|299aa|down_2|NZ_CP051219.1_633888_634785_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|119aa|down_3|NZ_CP051219.1_634835_635192_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|122aa|down_4|NZ_CP051219.1_635433_635799_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|329aa|down_5|NZ_CP051219.1_636091_637078_-	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|161aa|down_6|NZ_CP051219.1_637147_637630_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|100aa|down_7|NZ_CP051219.1_637725_638025_-	pfam13997, YqjK, YqjK-like protein	NA|135aa|down_8|NZ_CP051219.1_638014_638419_-	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|102aa|down_9|NZ_CP051219.1_638421_638727_-	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]
GCF_012516455.1_ASM1251645v1	NZ_CP051219	Escherichia coli strain SFE8 chromosome, complete genome	2	1103936-1105184	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no		cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTTCCCCGCGCCAGCGGGGATAAACCG	29,29,27	0	0	NA	NA	I-E:I-E:I-E	20,20,19	20	Orphan	cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	NA|47aa|up_1|NZ_CP051219.1_1102645_1102786_-,NA	NA|919aa|up_9|NZ_CP051219.1_1090529_1093286_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|434aa|up_8|NZ_CP051219.1_1093342_1094644_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_7|NZ_CP051219.1_1094691_1096926_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_6|NZ_CP051219.1_1097003_1097252_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_5|NZ_CP051219.1_1097251_1097587_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_4|NZ_CP051219.1_1097657_1098449_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_3|NZ_CP051219.1_1098676_1100314_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_2|NZ_CP051219.1_1100401_1101700_+	PRK00077, eno, enolase; Provisional	NA|47aa|up_1|NZ_CP051219.1_1102645_1102786_-	NA	NA|224aa|up_0|NZ_CP051219.1_1102924_1103596_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP051219.1_1105822_1107301_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP051219.1_1107327_1108605_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP051219.1_1108923_1109709_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP051219.1_1109778_1111233_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP051219.1_1111254_1112664_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP051219.1_1112641_1113421_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|298aa|down_6|NZ_CP051219.1_1113384_1114278_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP051219.1_1114425_1115001_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP051219.1_1115017_1115278_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP051219.1_1115268_1116540_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_012516455.1_ASM1251645v1	NZ_CP051219	Escherichia coli strain SFE8 chromosome, complete genome	3	1132232-1133541	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	21,21,21	21	TypeI-E	cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	NA,NA	NA|51aa|up_9|NZ_CP051219.1_1121881_1122034_+	pfam01848, HOK_GEF, Hok/gef family	NA|371aa|up_8|NZ_CP051219.1_1122110_1123223_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	cas3|900aa|up_7|NZ_CP051219.1_1123576_1126276_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP051219.1_1126373_1127936_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP051219.1_1127932_1128469_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|NZ_CP051219.1_1128480_1129536_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP051219.1_1129546_1130293_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP051219.1_1130274_1130925_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP051219.1_1130921_1131845_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP051219.1_1131841_1132135_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP051219.1_1133623_1134661_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP051219.1_1134912_1135821_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP051219.1_1135822_1137250_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP051219.1_1137249_1137855_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP051219.1_1137904_1138228_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP051219.1_1138421_1138733_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP051219.1_1138751_1139462_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP051219.1_1139461_1139941_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP051219.1_1139937_1140987_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP051219.1_1140967_1141729_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_012516455.1_ASM1251645v1	NZ_CP051219	Escherichia coli strain SFE8 chromosome, complete genome	4	2449087-2449210	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	NA,NA|30aa|down_7|NZ_CP051219.1_2458106_2458196_+	NA|471aa|up_9|NZ_CP051219.1_2438540_2439953_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP051219.1_2440509_2440719_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP051219.1_2441174_2441801_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP051219.1_2441821_2443924_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP051219.1_2443936_2444575_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP051219.1_2444638_2445307_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP051219.1_2445303_2446089_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP051219.1_2446092_2446905_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP051219.1_2446916_2448521_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP051219.1_2448646_2448952_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP051219.1_2449524_2450781_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP051219.1_2450821_2452195_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP051219.1_2452409_2453051_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP051219.1_2453090_2454239_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP051219.1_2454529_2455741_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP051219.1_2455853_2456786_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP051219.1_2456782_2457808_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP051219.1_2458106_2458196_+	NA	NA|390aa|down_8|NZ_CP051219.1_2458361_2459531_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP051219.1_2459676_2460258_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_012516455.1_ASM1251645v1	NZ_CP051219	Escherichia coli strain SFE8 chromosome, complete genome	5	3058566-3058657	5	CRISPRCasFinder	no		cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	NA|70aa|up_9|NZ_CP051219.1_3047641_3047851_-,NA	NA|70aa|up_9|NZ_CP051219.1_3047641_3047851_-	NA	NA|1321aa|up_8|NZ_CP051219.1_3047905_3051868_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP051219.1_3051907_3052546_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP051219.1_3052833_3053925_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP051219.1_3053924_3054617_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP051219.1_3054628_3055015_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP051219.1_3055022_3055823_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP051219.1_3055832_3056423_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP051219.1_3056433_3056928_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP051219.1_3056948_3058277_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP051219.1_3059080_3059677_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP051219.1_3059697_3059925_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP051219.1_3059962_3061204_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|83aa|down_3|NZ_CP051219.1_3061495_3061744_-	PRK09784, PRK09784, YccE family protein	NA|297aa|down_4|NZ_CP051219.1_3061861_3062752_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_5|NZ_CP051219.1_3063012_3063933_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_6|NZ_CP051219.1_3063932_3064238_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_7|NZ_CP051219.1_3064330_3064930_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_8|NZ_CP051219.1_3064926_3067473_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_9|NZ_CP051219.1_3067472_3068645_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC
GCF_012516455.1_ASM1251645v1	NZ_CP051219	Escherichia coli strain SFE8 chromosome, complete genome	6	3201352-3201500	6,3	CRISPRCasFinder,PILER-CR	no		cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	Orphan	ATTTCTAAGCTGCCTGTACGGCAGTGAAC,ATTTCTAAGCTGTCTGTACGGCAGTGAAC	29,29	0	0	NA	NA	I-F:I-F	2,2	2	Orphan	cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	NA,NA	NA|431aa|up_9|NZ_CP051219.1_3186182_3187475_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|NZ_CP051219.1_3187565_3188909_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|NZ_CP051219.1_3188919_3189531_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1369aa|up_6|NZ_CP051219.1_3189685_3193792_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|NZ_CP051219.1_3193926_3194421_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|NZ_CP051219.1_3194965_3195931_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP051219.1_3196053_3197820_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP051219.1_3197820_3199542_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP051219.1_3199583_3200288_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP051219.1_3200572_3200791_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|NZ_CP051219.1_3201713_3203990_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|NZ_CP051219.1_3204020_3204341_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|NZ_CP051219.1_3204663_3204888_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|NZ_CP051219.1_3204960_3206907_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|NZ_CP051219.1_3206903_3208019_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|317aa|down_5|NZ_CP051219.1_3208175_3209126_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|NZ_CP051219.1_3209122_3210781_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|NZ_CP051219.1_3211206_3211902_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_8|NZ_CP051219.1_3212397_3213297_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_9|NZ_CP051219.1_3213440_3215093_+	PRK05290, PRK05290, hybrid cluster protein; Provisional
GCF_012516455.1_ASM1251645v1	NZ_CP051219	Escherichia coli strain SFE8 chromosome, complete genome	7	3609879-3609991	4	PILER-CR	no		cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	Orphan	TTTTCTTACCTGATTCGGGTAAA	23	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	NA|34aa|up_7|NZ_CP051219.1_3604787_3604889_-,NA|119aa|up_6|NZ_CP051219.1_3604978_3605335_-,NA|36aa|up_3|NZ_CP051219.1_3607815_3607923_-,NA|101aa|up_1|NZ_CP051219.1_3608414_3608717_-,NA	NA|57aa|up_9|NZ_CP051219.1_3604165_3604336_-	PRK09689, PRK09689, prophage protein NinE; Provisional	NA|152aa|up_8|NZ_CP051219.1_3604335_3604791_-	PRK09741, PRK09741, hypothetical protein; Provisional	NA|34aa|up_7|NZ_CP051219.1_3604787_3604889_-	NA	NA|119aa|up_6|NZ_CP051219.1_3604978_3605335_-	NA	NA|108aa|up_5|NZ_CP051219.1_3605796_3606120_-	pfam10548, P22_AR_C, P22AR C-terminal domain	NA|509aa|up_4|NZ_CP051219.1_3606231_3607758_-	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain	NA|36aa|up_3|NZ_CP051219.1_3607815_3607923_-	NA	NA|111aa|up_2|NZ_CP051219.1_3608014_3608347_-	PRK09541, emrE, EmrE family multidrug efflux SMR transporter	NA|101aa|up_1|NZ_CP051219.1_3608414_3608717_-	NA	NA|234aa|up_0|NZ_CP051219.1_3608713_3609415_-	pfam06992, Phage_lambda_P, Replication protein P	NA|180aa|down_0|NZ_CP051219.1_3610427_3610967_-	pfam06254, YdaT_toxin, Putative bacterial toxin ydaT	NA|76aa|down_1|NZ_CP051219.1_3610997_3611225_-	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|231aa|down_2|NZ_CP051219.1_3611335_3612028_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|410aa|down_3|NZ_CP051219.1_3612144_3613373_-	PRK09409, PRK09409, IS2 transposase TnpB; Reviewed	NA|349aa|down_4|NZ_CP051219.1_3613899_3614946_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|69aa|down_5|NZ_CP051219.1_3615589_3615796_+	PRK11354, kil, FtsZ inhibitor protein; Reviewed	NA|99aa|down_6|NZ_CP051219.1_3615871_3616168_+	pfam06064, Gam, Host-nuclease inhibitor protein Gam	NA|262aa|down_7|NZ_CP051219.1_3616173_3616959_+	TIGR01913, Uncharacterized_protein_UU154, phage recombination protein Bet	NA|227aa|down_8|NZ_CP051219.1_3616955_3617636_+	pfam09588, YqaJ, YqaJ-like viral recombinase domain	NA|61aa|down_9|NZ_CP051219.1_3617632_3617815_+	pfam07026, DUF1317, Protein of unknown function (DUF1317)
GCF_012516455.1_ASM1251645v1	NZ_CP051219	Escherichia coli strain SFE8 chromosome, complete genome	8	3822876-3823023	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	Orphan	CGCGAGCGCCTTATCCGACCTACGGTTCAGACCTGTAGGCATGATAAGACGCG	53	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,TnsE_C,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,WYL	NA,NA|82aa|down_7|NZ_CP051219.1_3831938_3832184_-,NA|272aa|down_8|NZ_CP051219.1_3832595_3833411_-	NA|361aa|up_9|NZ_CP051219.1_3810073_3811156_+	PRK09526, lacI, lac repressor; Reviewed	NA|1025aa|up_8|NZ_CP051219.1_3811278_3814353_+	PRK09525, lacZ, beta-galactosidase	NA|418aa|up_7|NZ_CP051219.1_3814404_3815658_+	PRK09528, lacY, galactoside permease; Reviewed	NA|204aa|up_6|NZ_CP051219.1_3815723_3816335_+	PRK09527, lacA, galactoside O-acetyltransferase; Reviewed	NA|394aa|up_5|NZ_CP051219.1_3816437_3817619_-	PRK09705, cynX, putative cyanate transporter; Provisional	NA|157aa|up_4|NZ_CP051219.1_3817624_3818095_-	COG1513, CynS, Cyanate lyase [Inorganic ion transport and metabolism]	NA|220aa|up_3|NZ_CP051219.1_3818125_3818785_-	cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|300aa|up_2|NZ_CP051219.1_3818894_3819794_+	PRK11242, PRK11242, DNA-binding transcriptional regulator CynR; Provisional	NA|428aa|up_1|NZ_CP051219.1_3820130_3821414_-	PRK09230, PRK09230, cytosine deaminase; Provisional	NA|420aa|up_0|NZ_CP051219.1_3821403_3822663_-	PRK11017, codB, cytosine permease; Provisional	NA|629aa|down_0|NZ_CP051219.1_3823088_3824975_-	PRK10524, prpE, propionyl-CoA synthetase; Provisional	NA|484aa|down_1|NZ_CP051219.1_3825014_3826466_-	PRK09425, prpD, bifunctional 2-methylcitrate dehydratase/aconitate hydratase	NA|390aa|down_2|NZ_CP051219.1_3826499_3827669_-	PRK12351, PRK12351, methylcitrate synthase; Provisional	NA|297aa|down_3|NZ_CP051219.1_3828015_3828906_-	PRK11320, prpB, 2-methylisocitrate lyase; Provisional	NA|529aa|down_4|NZ_CP051219.1_3829144_3830731_+	PRK15424, PRK15424, propionate catabolism operon regulatory protein PrpR; Provisional	NA|92aa|down_5|NZ_CP051219.1_3830828_3831104_-	PRK09929, PRK09929, hypothetical protein; Provisional	NA|224aa|down_6|NZ_CP051219.1_3831250_3831922_+	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein	NA|82aa|down_7|NZ_CP051219.1_3831938_3832184_-	NA	NA|272aa|down_8|NZ_CP051219.1_3832595_3833411_-	NA	NA|350aa|down_9|NZ_CP051219.1_3833653_3834703_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)
