assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_012273615.1_ASM1227361v1	NZ_CP050995	Chryseobacterium gallinarum strain FDAARGOS_636 chromosome, complete genome	1	662944-665608	1,1	CRISPRCasFinder,PILER-CR	no	cas9,cas1,cas2	WYL,PD-DExK,cas9,cas1,cas2,DEDDh,csa3,cas3	 Type II-B,Type II-C, or Type II-C?,Type II-A,Type II-B	GCTGTGACTAATCACGAAGATAATAAATTTTGAAAGCAATTCACAAC,GCTGTGACTAATCACGAAGATAATAAATTTTGAAAGCAATTCACAAC	47,47	0	0	NA	NA	NA:NA	34,31	34	TypeII-B,TypeII-C,orTypeII-C?,TypeII-A,TypeII-B	WYL,PD-DExK,cas9,cas1,cas2,DEDDh,csa3,cas3	NA|59aa|up_8|NZ_CP050995.1_649310_649487_+,NA|382aa|up_7|NZ_CP050995.1_649662_650808_+,NA|119aa|down_2|NZ_CP050995.1_668939_669296_-,NA|54aa|down_9|NZ_CP050995.1_676389_676551_-	NA|495aa|up_9|NZ_CP050995.1_647503_648988_-	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|59aa|up_8|NZ_CP050995.1_649310_649487_+	NA	NA|382aa|up_7|NZ_CP050995.1_649662_650808_+	NA	NA|524aa|up_6|NZ_CP050995.1_650966_652538_+	cd08015, M28_like, M28 Zn-peptidase-like; uncharacterized subfamily	NA|212aa|up_5|NZ_CP050995.1_652634_653270_-	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|419aa|up_4|NZ_CP050995.1_653338_654595_-	pfam14281, PDDEXK_4, PD-(D/E)XK nuclease superfamily	NA|708aa|up_3|NZ_CP050995.1_654597_656721_-	COG2183, Tex, Transcriptional accessory protein [Transcription]	cas9|1412aa|up_2|NZ_CP050995.1_657419_661655_+	pfam18541, RuvC_III, RuvC endonuclease subdomain 3	cas1|298aa|up_1|NZ_CP050995.1_661657_662551_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|113aa|up_0|NZ_CP050995.1_662547_662886_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|665aa|down_0|NZ_CP050995.1_665746_667741_-	pfam13585, CHU_C, C-terminal domain of CHU protein family	NA|225aa|down_1|NZ_CP050995.1_668160_668835_+	pfam04264, YceI, YceI-like domain	NA|119aa|down_2|NZ_CP050995.1_668939_669296_-	NA	NA|84aa|down_3|NZ_CP050995.1_669426_669678_+	pfam06961, DUF1294, Protein of unknown function (DUF1294)	NA|183aa|down_4|NZ_CP050995.1_669794_670343_+	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus	NA|602aa|down_5|NZ_CP050995.1_670656_672462_+	TIGR01394, GTP-binding_protein_TypA/BipA_homolog, GTP-binding protein TypA/BipA	NA|539aa|down_6|NZ_CP050995.1_672588_674205_+	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown]	NA|184aa|down_7|NZ_CP050995.1_674425_674977_+	cd01055, Nonheme_Ferritin, nonheme-containing ferritins	NA|364aa|down_8|NZ_CP050995.1_675155_676247_+	PRK09601, PRK09601, redox-regulated ATPase YchF	NA|54aa|down_9|NZ_CP050995.1_676389_676551_-	NA
GCF_012273615.1_ASM1227361v1	NZ_CP050995	Chryseobacterium gallinarum strain FDAARGOS_636 chromosome, complete genome	2	1658273-1658386	2	CRISPRCasFinder	no		WYL,PD-DExK,cas9,cas1,cas2,DEDDh,csa3,cas3	Orphan	GGCTTATGAAAAAAGATATGGCTTCACTTACATTAGTTA	39	0	0	NA	NA	NA	1	1	Orphan	WYL,PD-DExK,cas9,cas1,cas2,DEDDh,csa3,cas3	NA|73aa|up_8|NZ_CP050995.1_1651084_1651303_-,NA|215aa|up_6|NZ_CP050995.1_1652078_1652723_+,NA|182aa|down_0|NZ_CP050995.1_1658427_1658973_+,NA|105aa|down_5|NZ_CP050995.1_1663140_1663455_+	NA|125aa|up_9|NZ_CP050995.1_1650710_1651085_-	COG4654, COG4654, Cytochrome c551/c552 [Energy production and conversion]	NA|73aa|up_8|NZ_CP050995.1_1651084_1651303_-	NA	NA|150aa|up_7|NZ_CP050995.1_1651499_1651949_+	cd02236, cupin_CV2614-like, Chromobacterium violaceum CV2614 and related proteins, cupin domain	NA|215aa|up_6|NZ_CP050995.1_1652078_1652723_+	NA	NA|473aa|up_5|NZ_CP050995.1_1652982_1654401_+	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]	NA|200aa|up_4|NZ_CP050995.1_1654473_1655073_+	PRK05670, PRK05670, anthranilate synthase component II; Provisional	NA|329aa|up_3|NZ_CP050995.1_1655111_1656098_+	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional	NA|263aa|up_2|NZ_CP050995.1_1656173_1656962_+	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC	NA|230aa|up_1|NZ_CP050995.1_1656990_1657680_+	cd00405, PRAI, Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan biosynthesis, the conversion of N-(5'- phosphoribosyl)-anthranilate (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose 5-phosphate (CdRP)	NA|151aa|up_0|NZ_CP050995.1_1657726_1658179_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|182aa|down_0|NZ_CP050995.1_1658427_1658973_+	NA	NA|395aa|down_1|NZ_CP050995.1_1658977_1660162_+	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated	NA|245aa|down_2|NZ_CP050995.1_1660226_1660961_+	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional	NA|243aa|down_3|NZ_CP050995.1_1661040_1661769_+	cd16444, LipB, lipoyl/octanoyl transferase	NA|322aa|down_4|NZ_CP050995.1_1662104_1663070_+	pfam18626, Gln_deamidase_2, Glutaminase	NA|105aa|down_5|NZ_CP050995.1_1663140_1663455_+	NA	NA|251aa|down_6|NZ_CP050995.1_1663477_1664230_-	PRK06500, PRK06500, SDR family oxidoreductase	NA|211aa|down_7|NZ_CP050995.1_1664506_1665139_+	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB	NA|145aa|down_8|NZ_CP050995.1_1665170_1665605_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|142aa|down_9|NZ_CP050995.1_1665605_1666031_+	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily
GCF_012273615.1_ASM1227361v1	NZ_CP050995	Chryseobacterium gallinarum strain FDAARGOS_636 chromosome, complete genome	3	2701948-2702076	3	CRISPRCasFinder	no		WYL,PD-DExK,cas9,cas1,cas2,DEDDh,csa3,cas3	Orphan	ACCGTCACCATCTGTATCTGGCCAAGGACAACCGTTGTTTTC	42	0	0	NA	NA	NA	1	1	Orphan	WYL,PD-DExK,cas9,cas1,cas2,DEDDh,csa3,cas3	NA|385aa|up_8|NZ_CP050995.1_2693573_2694728_-,NA|263aa|up_7|NZ_CP050995.1_2694739_2695528_-,NA|321aa|up_6|NZ_CP050995.1_2695520_2696483_-,NA	NA|336aa|up_9|NZ_CP050995.1_2692476_2693484_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|385aa|up_8|NZ_CP050995.1_2693573_2694728_-	NA	NA|263aa|up_7|NZ_CP050995.1_2694739_2695528_-	NA	NA|321aa|up_6|NZ_CP050995.1_2695520_2696483_-	NA	NA|328aa|up_5|NZ_CP050995.1_2696466_2697450_-	pfam01944, SpoIIM, Stage II sporulation protein M	NA|250aa|up_4|NZ_CP050995.1_2697478_2698228_+	pfam06271, RDD, RDD family	NA|97aa|up_3|NZ_CP050995.1_2698347_2698638_+	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase	NA|324aa|up_2|NZ_CP050995.1_2698626_2699598_-	TIGR00661, conserved_hypothetical_protein, conserved hypothetical protein	NA|275aa|up_1|NZ_CP050995.1_2699597_2700422_-	cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain	NA|247aa|up_0|NZ_CP050995.1_2700563_2701304_-	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator	NA|153aa|down_0|NZ_CP050995.1_2702987_2703446_-	pfam01668, SmpB, SmpB protein	NA|541aa|down_1|NZ_CP050995.1_2703568_2705191_+	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional	NA|271aa|down_2|NZ_CP050995.1_2705275_2706088_-	cd07334, M48C_loiP_like, Peptidase M48C Ste24p loiP-like, integral membrane protein	NA|571aa|down_3|NZ_CP050995.1_2706195_2707908_+	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|195aa|down_4|NZ_CP050995.1_2707946_2708531_+	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase	NA|114aa|down_5|NZ_CP050995.1_2708607_2708949_+	pfam12823, DUF3817, Domain of unknown function (DUF3817)	NA|754aa|down_6|NZ_CP050995.1_2709192_2711454_+	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family	NA|751aa|down_7|NZ_CP050995.1_2711490_2713743_+	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family	NA|168aa|down_8|NZ_CP050995.1_2714041_2714545_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|585aa|down_9|NZ_CP050995.1_2714645_2716400_-	cd08982, GH43-like, Glycosyl hydrolase family 43 protein; uncharacterized
GCF_012273615.1_ASM1227361v1	NZ_CP050995	Chryseobacterium gallinarum strain FDAARGOS_636 chromosome, complete genome	4	3828874-3828977	4	CRISPRCasFinder	no		WYL,PD-DExK,cas9,cas1,cas2,DEDDh,csa3,cas3	Orphan	CCGTGGAAGAGCACTTCAAAATGAGAGACGTCACACCA	38	0	0	NA	NA	NA	1	1	Orphan	WYL,PD-DExK,cas9,cas1,cas2,DEDDh,csa3,cas3	NA|80aa|up_5|NZ_CP050995.1_3826994_3827234_+,NA|60aa|up_4|NZ_CP050995.1_3827230_3827410_+,NA|130aa|up_3|NZ_CP050995.1_3827469_3827859_+,NA|97aa|up_2|NZ_CP050995.1_3827941_3828232_+,NA|62aa|up_1|NZ_CP050995.1_3828228_3828414_+,NA|49aa|up_0|NZ_CP050995.1_3828416_3828563_+,NA|92aa|down_0|NZ_CP050995.1_3829036_3829312_+,NA|171aa|down_1|NZ_CP050995.1_3829314_3829827_+,NA|279aa|down_2|NZ_CP050995.1_3829810_3830647_+,NA|92aa|down_3|NZ_CP050995.1_3830660_3830936_+,NA|48aa|down_4|NZ_CP050995.1_3830938_3831082_+,NA|140aa|down_6|NZ_CP050995.1_3831799_3832219_+,NA|274aa|down_8|NZ_CP050995.1_3832775_3833597_+	NA|415aa|up_9|NZ_CP050995.1_3823353_3824598_-	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II	NA|80aa|up_8|NZ_CP050995.1_3824632_3824872_-	PRK00982, acpP, acyl carrier protein; Provisional	NA|186aa|up_7|NZ_CP050995.1_3825372_3825930_+	COG0431, COG0431, Predicted flavoprotein [General function prediction only]	NA|238aa|up_6|NZ_CP050995.1_3826109_3826823_-	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|80aa|up_5|NZ_CP050995.1_3826994_3827234_+	NA	NA|60aa|up_4|NZ_CP050995.1_3827230_3827410_+	NA	NA|130aa|up_3|NZ_CP050995.1_3827469_3827859_+	NA	NA|97aa|up_2|NZ_CP050995.1_3827941_3828232_+	NA	NA|62aa|up_1|NZ_CP050995.1_3828228_3828414_+	NA	NA|49aa|up_0|NZ_CP050995.1_3828416_3828563_+	NA	NA|92aa|down_0|NZ_CP050995.1_3829036_3829312_+	NA	NA|171aa|down_1|NZ_CP050995.1_3829314_3829827_+	NA	NA|279aa|down_2|NZ_CP050995.1_3829810_3830647_+	NA	NA|92aa|down_3|NZ_CP050995.1_3830660_3830936_+	NA	NA|48aa|down_4|NZ_CP050995.1_3830938_3831082_+	NA	NA|254aa|down_5|NZ_CP050995.1_3831041_3831803_+	COG0863, COG0863, DNA modification methylase [DNA replication, recombination, and repair]	NA|140aa|down_6|NZ_CP050995.1_3831799_3832219_+	NA	NA|171aa|down_7|NZ_CP050995.1_3832263_3832776_+	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|274aa|down_8|NZ_CP050995.1_3832775_3833597_+	NA	NA|307aa|down_9|NZ_CP050995.1_3833568_3834489_+	PRK06835, PRK06835, DNA replication protein DnaC; Validated
