assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_012273515.1_ASM1227351v1	NZ_CP050975	Streptomyces sp. RPA4-2 chromosome, complete genome	1	282600-282794	1	CRT	no		DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	Orphan	GACNACATCGGCTGGCCCAAG	21	1	3	282666-282686|282666-282686|282666-282686	NZ_CP050975.1_587891-587911|NZ_CP050975.1_2732590-2732610|NZ_CP050975.1_6940919-6940939	NA	4	4	Orphan	DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	NA|179aa|up_8|NZ_CP050975.1_271644_272181_-,NA|296aa|up_4|NZ_CP050975.1_276857_277745_-,NA|48aa|up_0|NZ_CP050975.1_282429_282573_+,NA|89aa|down_0|NZ_CP050975.1_283056_283323_+,NA|46aa|down_5|NZ_CP050975.1_288206_288344_-	NA|271aa|up_9|NZ_CP050975.1_270807_271620_+	TIGR03083, TIGR03083, uncharacterized Actinobacterial protein TIGR03083	NA|179aa|up_8|NZ_CP050975.1_271644_272181_-	NA	NA|457aa|up_7|NZ_CP050975.1_272548_273919_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|246aa|up_6|NZ_CP050975.1_274094_274832_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|629aa|up_5|NZ_CP050975.1_274855_276742_-	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|296aa|up_4|NZ_CP050975.1_276857_277745_-	NA	NA|424aa|up_3|NZ_CP050975.1_278140_279412_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|330aa|up_2|NZ_CP050975.1_279657_280647_-	PRK09986, PRK09986, LysR family transcriptional regulator	NA|385aa|up_1|NZ_CP050975.1_280684_281839_-	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]	NA|48aa|up_0|NZ_CP050975.1_282429_282573_+	NA	NA|89aa|down_0|NZ_CP050975.1_283056_283323_+	NA	NA|732aa|down_1|NZ_CP050975.1_283514_285710_-	pfam02522, Antibiotic_NAT, Aminoglycoside 3-N-acetyltransferase	NA|181aa|down_2|NZ_CP050975.1_285825_286368_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|296aa|down_3|NZ_CP050975.1_286364_287252_-	pfam08007, Cupin_4, Cupin superfamily protein	NA|282aa|down_4|NZ_CP050975.1_287248_288094_-	pfam08007, Cupin_4, Cupin superfamily protein	NA|46aa|down_5|NZ_CP050975.1_288206_288344_-	NA	NA|138aa|down_6|NZ_CP050975.1_289077_289491_-	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|199aa|down_7|NZ_CP050975.1_289851_290448_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|248aa|down_8|NZ_CP050975.1_291034_291778_+	cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C)	NA|683aa|down_9|NZ_CP050975.1_291758_293807_+	cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS)
GCF_012273515.1_ASM1227351v1	NZ_CP050975	Streptomyces sp. RPA4-2 chromosome, complete genome	2	356494-356597	1	CRISPRCasFinder	no		DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	Orphan	CGGGGCGTGCCTGCGGGCTCCGGG	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	NA|158aa|up_8|NZ_CP050975.1_341624_342098_+,NA|79aa|up_4|NZ_CP050975.1_350198_350435_-,NA|119aa|down_2|NZ_CP050975.1_360407_360764_-,NA|116aa|down_3|NZ_CP050975.1_362231_362579_-,NA|395aa|down_4|NZ_CP050975.1_362612_363797_-	NA|408aa|up_9|NZ_CP050975.1_340167_341391_-	PRK06753, PRK06753, hypothetical protein; Provisional	NA|158aa|up_8|NZ_CP050975.1_341624_342098_+	NA	NA|404aa|up_7|NZ_CP050975.1_342735_343947_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|295aa|up_6|NZ_CP050975.1_344537_345422_+	pfam05675, DUF817, Protein of unknown function (DUF817)	NA|286aa|up_5|NZ_CP050975.1_348580_349438_-	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism]	NA|79aa|up_4|NZ_CP050975.1_350198_350435_-	NA	NA|105aa|up_3|NZ_CP050975.1_351270_351585_-	smart00825, PKS_KS, Beta-ketoacyl synthase	NA|275aa|up_2|NZ_CP050975.1_353213_354038_-	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain	NA|528aa|up_1|NZ_CP050975.1_354426_356010_-	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|66aa|up_0|NZ_CP050975.1_356043_356241_-	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit	NA|274aa|down_0|NZ_CP050975.1_357185_358007_+	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain	NA|578aa|down_1|NZ_CP050975.1_358620_360354_-	cd19543, DCL_NRPS, DCL-type Condensation domain of nonribosomal peptide synthetases (NRPSs), which catalyzes the condensation between a D-aminoacyl/peptidyl-PCP donor and a L-aminoacyl-PCP acceptor	NA|119aa|down_2|NZ_CP050975.1_360407_360764_-	NA	NA|116aa|down_3|NZ_CP050975.1_362231_362579_-	NA	NA|395aa|down_4|NZ_CP050975.1_362612_363797_-	NA	NA|315aa|down_5|NZ_CP050975.1_363819_364764_-	cd08861, OtcD1_ARO-CYC_like, N-terminal and C-terminal aromatase/cyclase domains of Streptomyces rimosus  OtcD1 and related domains	NA|288aa|down_6|NZ_CP050975.1_365499_366363_-	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain	NA|177aa|down_7|NZ_CP050975.1_367182_367713_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|230aa|down_8|NZ_CP050975.1_368268_368958_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|240aa|down_9|NZ_CP050975.1_375359_376079_+	PRK07041, PRK07041, SDR family oxidoreductase
GCF_012273515.1_ASM1227351v1	NZ_CP050975	Streptomyces sp. RPA4-2 chromosome, complete genome	3	2283962-2284075	2	CRISPRCasFinder	no		DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	Orphan	GTCGTCACGACGCGGGCCGCTCGGCCGGTCGTC	33	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	NA|106aa|up_6|NZ_CP050975.1_2275728_2276046_-,NA	NA|601aa|up_9|NZ_CP050975.1_2265282_2267085_+	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|302aa|up_8|NZ_CP050975.1_2273955_2274861_-	PRK03372, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|272aa|up_7|NZ_CP050975.1_2274857_2275673_-	COG1189, COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|106aa|up_6|NZ_CP050975.1_2275728_2276046_-	NA	NA|116aa|up_5|NZ_CP050975.1_2276088_2276436_+	pfam14864, Alkyl_sulf_C, Alkyl sulfatase C-terminal	NA|288aa|up_4|NZ_CP050975.1_2276440_2277304_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|348aa|up_3|NZ_CP050975.1_2277315_2278359_-	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism]	NA|348aa|up_2|NZ_CP050975.1_2278355_2279399_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|431aa|up_1|NZ_CP050975.1_2280674_2281967_+	pfam06245, DUF1015, Protein of unknown function (DUF1015)	NA|275aa|up_0|NZ_CP050975.1_2282032_2282857_-	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional	NA|214aa|down_0|NZ_CP050975.1_2290371_2291013_-	pfam02245, Pur_DNA_glyco, Methylpurine-DNA glycosylase (MPG)	NA|262aa|down_1|NZ_CP050975.1_2291198_2291984_+	pfam07070, Spo0M, SpoOM protein	NA|178aa|down_2|NZ_CP050975.1_2292023_2292557_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|169aa|down_3|NZ_CP050975.1_2292715_2293222_+	COG1403, McrA, Restriction endonuclease [Defense mechanisms]	NA|312aa|down_4|NZ_CP050975.1_2293314_2294250_-	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones]	NA|264aa|down_5|NZ_CP050975.1_2294944_2295736_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|80aa|down_6|NZ_CP050975.1_2296873_2297113_-	pfam03777, DUF320, Small secreted domain (DUF320)	NA|82aa|down_7|NZ_CP050975.1_2297318_2297564_-	pfam03777, DUF320, Small secreted domain (DUF320)	NA|214aa|down_8|NZ_CP050975.1_2297712_2298354_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|382aa|down_9|NZ_CP050975.1_2298346_2299492_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]
GCF_012273515.1_ASM1227351v1	NZ_CP050975	Streptomyces sp. RPA4-2 chromosome, complete genome	4	2733155-2733333	1	PILER-CR	no		DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	Orphan	GGGGTCCTGCGCAGTTCCCCGCGCCCCTGAGGAG	34	0	0	NA	NA	NA	2	2	Orphan	DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	NA,NA|399aa|down_2|NZ_CP050975.1_2735897_2737094_-,NA|80aa|down_6|NZ_CP050975.1_2741229_2741469_-	NA|260aa|up_9|NZ_CP050975.1_2721263_2722043_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|270aa|up_8|NZ_CP050975.1_2722258_2723068_+	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|235aa|up_7|NZ_CP050975.1_2723060_2723765_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|251aa|up_6|NZ_CP050975.1_2723885_2724638_-	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|318aa|up_5|NZ_CP050975.1_2725021_2725975_-	TIGR00744, Glucokinase_Glucose_kinase	NA|157aa|up_4|NZ_CP050975.1_2726029_2726500_-	pfam17230, DUF5304, Family of unknown function (DUF5304)	NA|149aa|up_3|NZ_CP050975.1_2727923_2728370_-	cd07819, SRPBCC_2, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|266aa|up_2|NZ_CP050975.1_2728477_2729275_-	cd07392, MPP_PAE1087, Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain	NA|599aa|up_1|NZ_CP050975.1_2729571_2731368_+	cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases	NA|528aa|up_0|NZ_CP050975.1_2731407_2732991_-	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|381aa|down_0|NZ_CP050975.1_2733338_2734481_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|411aa|down_1|NZ_CP050975.1_2734632_2735865_+	pfam09594, GT87, Glycosyltransferase family 87	NA|399aa|down_2|NZ_CP050975.1_2735897_2737094_-	NA	NA|344aa|down_3|NZ_CP050975.1_2737126_2738158_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|347aa|down_4|NZ_CP050975.1_2738382_2739423_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|450aa|down_5|NZ_CP050975.1_2739845_2741195_-	pfam05991, NYN_YacP, YacP-like NYN domain	NA|80aa|down_6|NZ_CP050975.1_2741229_2741469_-	NA	NA|244aa|down_7|NZ_CP050975.1_2741599_2742331_+	pfam01694, Rhomboid, Rhomboid family	NA|94aa|down_8|NZ_CP050975.1_2742327_2742609_+	pfam01037, AsnC_trans_reg, Lrp/AsnC ligand binding domain	NA|355aa|down_9|NZ_CP050975.1_2744680_2745745_-	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional
GCF_012273515.1_ASM1227351v1	NZ_CP050975	Streptomyces sp. RPA4-2 chromosome, complete genome	5	2790146-2790245	3	CRISPRCasFinder	no	WYL	DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	Unclear	CCGGAACGTTCCAGCGCAGGCCCG	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	NA|256aa|up_7|NZ_CP050975.1_2777164_2777932_-,NA|66aa|down_6|NZ_CP050975.1_2800197_2800395_+	NA|369aa|up_9|NZ_CP050975.1_2773346_2774453_+	PRK00105, cobT, nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Reviewed	NA|599aa|up_8|NZ_CP050975.1_2774715_2776512_+	PRK02983, lysS, bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX	NA|256aa|up_7|NZ_CP050975.1_2777164_2777932_-	NA	NA|261aa|up_6|NZ_CP050975.1_2778006_2778789_+	PRK00235, cobS, cobalamin synthase; Reviewed	NA|510aa|up_5|NZ_CP050975.1_2779303_2780833_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|463aa|up_4|NZ_CP050975.1_2781123_2782512_+	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed	NA|208aa|up_3|NZ_CP050975.1_2784682_2785306_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|901aa|up_2|NZ_CP050975.1_2785565_2788268_+	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	WYL|324aa|up_1|NZ_CP050975.1_2788371_2789343_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|173aa|up_0|NZ_CP050975.1_2789458_2789977_+	pfam14024, DUF4240, Protein of unknown function (DUF4240)	NA|339aa|down_0|NZ_CP050975.1_2790431_2791448_-	smart00701, PGRP, Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme	NA|395aa|down_1|NZ_CP050975.1_2791635_2792820_+	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|166aa|down_2|NZ_CP050975.1_2792856_2793354_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|306aa|down_3|NZ_CP050975.1_2793416_2794334_+	TIGR01777, Hypothetical_UPF0105_protein_Rv2216/MT2273/Mb2239	NA|265aa|down_4|NZ_CP050975.1_2797911_2798706_+	PRK14345, PRK14345, lipoyl(octanoyl) transferase LipB	NA|322aa|down_5|NZ_CP050975.1_2798913_2799879_+	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|66aa|down_6|NZ_CP050975.1_2800197_2800395_+	NA	NA|234aa|down_7|NZ_CP050975.1_2800507_2801209_+	pfam13829, DUF4191, Domain of unknown function (DUF4191)	NA|156aa|down_8|NZ_CP050975.1_2801515_2801983_-	pfam06271, RDD, RDD family	NA|470aa|down_9|NZ_CP050975.1_2802183_2803593_+	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I
GCF_012273515.1_ASM1227351v1	NZ_CP050975	Streptomyces sp. RPA4-2 chromosome, complete genome	6	2942609-2942692	4	CRISPRCasFinder	no		DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	Orphan	CAGCCCTACGGCGGTCAGCCGCAG	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	NA,NA|191aa|down_1|NZ_CP050975.1_2944137_2944710_-,NA|98aa|down_2|NZ_CP050975.1_2944855_2945149_+	NA|359aa|up_9|NZ_CP050975.1_2928930_2930007_-	cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase	NA|295aa|up_8|NZ_CP050975.1_2930037_2930922_-	PLN02864, PLN02864, enoyl-CoA hydratase	NA|294aa|up_7|NZ_CP050975.1_2931238_2932120_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|241aa|up_6|NZ_CP050975.1_2932119_2932842_+	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|451aa|up_5|NZ_CP050975.1_2933036_2934389_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|211aa|up_4|NZ_CP050975.1_2934457_2935090_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|180aa|up_3|NZ_CP050975.1_2935988_2936528_-	TIGR02983, putative_RNA_polymerase_ECF-subfamily_sigma_factor, RNA polymerase sigma-70 factor, sigma-E family	NA|399aa|up_2|NZ_CP050975.1_2936924_2938121_-	PRK08256, PRK08256, lipid-transfer protein; Provisional	NA|580aa|up_1|NZ_CP050975.1_2938355_2940095_+	cd17504, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|217aa|up_0|NZ_CP050975.1_2940295_2940946_+	pfam13578, Methyltransf_24, Methyltransferase domain	NA|345aa|down_0|NZ_CP050975.1_2943080_2944115_+	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|191aa|down_1|NZ_CP050975.1_2944137_2944710_-	NA	NA|98aa|down_2|NZ_CP050975.1_2944855_2945149_+	NA	NA|356aa|down_3|NZ_CP050975.1_2945238_2946306_-	TIGR01577, Uncharacterized_glycosyl_hydrolase_MJ1610, oligosaccharide amylase	NA|249aa|down_4|NZ_CP050975.1_2946302_2947049_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|211aa|down_5|NZ_CP050975.1_2948739_2949372_+	pfam17925, TetR_C_20, Tetracyclin repressor-like, C-terminal domain	NA|78aa|down_6|NZ_CP050975.1_2949828_2950062_-	pfam13370, Fer4_13, 4Fe-4S single cluster domain of Ferredoxin I	NA|486aa|down_7|NZ_CP050975.1_2950065_2951523_-	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase  AldA-like	NA|346aa|down_8|NZ_CP050975.1_2951713_2952751_+	cd07725, TTHA1429-like_MBL-fold, uncharacterized Thermus thermophilus TTHA1429 and related proteins; MBL-fold metallo hydrolase domain	NA|221aa|down_9|NZ_CP050975.1_2952816_2953479_-	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase and Choline Kinase family
GCF_012273515.1_ASM1227351v1	NZ_CP050975	Streptomyces sp. RPA4-2 chromosome, complete genome	7	3609521-3609645	5	CRISPRCasFinder	no		DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	Orphan	AGGGGCGCGGGGAACTGCGCGCCCAACCCCCACC	34	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	NA,NA|109aa|down_2|NZ_CP050975.1_3611557_3611884_-	NA|361aa|up_9|NZ_CP050975.1_3598359_3599442_-	PRK15046, PRK15046, 2-aminoethylphosphonate ABC transporter substrate-binding protein; Provisional	NA|266aa|up_8|NZ_CP050975.1_3599522_3600320_-	TIGR03255, PhnV, 2-aminoethylphosphonate ABC transport system, membrane component PhnV	NA|291aa|up_7|NZ_CP050975.1_3600306_3601179_-	PRK15050, PRK15050, 2-aminoethylphosphonate transport system permease PhnU; Provisional	NA|352aa|up_6|NZ_CP050975.1_3601171_3602227_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|238aa|up_5|NZ_CP050975.1_3602223_3602937_-	TIGR03351, PhnX-like, phosphonatase-like hydrolase	NA|375aa|up_4|NZ_CP050975.1_3602954_3604079_-	TIGR03364, putative_secreted_oxidoreductase, FAD dependent oxidoreductase TIGR03364	NA|253aa|up_3|NZ_CP050975.1_3604222_3604981_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|449aa|up_2|NZ_CP050975.1_3606502_3607849_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|373aa|up_1|NZ_CP050975.1_3607896_3609015_+	PRK11579, PRK11579, putative oxidoreductase; Provisional	NA|155aa|up_0|NZ_CP050975.1_3609011_3609476_+	PRK02487, PRK02487, heme-degrading domain-containing protein	NA|286aa|down_0|NZ_CP050975.1_3609707_3610565_-	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_1|NZ_CP050975.1_3610715_3611426_-	pfam02096, 60KD_IMP, 60Kd inner membrane protein	NA|109aa|down_2|NZ_CP050975.1_3611557_3611884_-	NA	NA|272aa|down_3|NZ_CP050975.1_3612117_3612933_-	cd05830, Sortase_E, Sortase domain found in the class E family of sortases	NA|492aa|down_4|NZ_CP050975.1_3613215_3614691_+	pfam14587, Glyco_hydr_30_2, O-Glycosyl hydrolase family 30	NA|340aa|down_5|NZ_CP050975.1_3614848_3615868_+	pfam02810, SEC-C, SEC-C motif	NA|527aa|down_6|NZ_CP050975.1_3616045_3617626_+	pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	NA|973aa|down_7|NZ_CP050975.1_3617745_3620664_+	pfam10593, Z1, Z1 domain	NA|327aa|down_8|NZ_CP050975.1_3620711_3621692_+	pfam09126, NaeI, Restriction endonuclease NaeI	NA|253aa|down_9|NZ_CP050975.1_3621694_3622453_+	pfam09015, NgoMIV_restric, NgoMIV restriction enzyme
GCF_012273515.1_ASM1227351v1	NZ_CP050975	Streptomyces sp. RPA4-2 chromosome, complete genome	8	5383503-5383602	6	CRISPRCasFinder	no		DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	Orphan	GAGGACGTCGAGGACGAGGACGTCC	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	NA,NA	NA|219aa|up_9|NZ_CP050975.1_5371577_5372234_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	NA|55aa|up_8|NZ_CP050975.1_5374369_5374534_+	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|149aa|up_7|NZ_CP050975.1_5374734_5375181_+	pfam13452, MaoC_dehydrat_N, N-terminal half of MaoC dehydratase	NA|143aa|up_6|NZ_CP050975.1_5375183_5375612_+	cd03453, SAV4209_like, SAV4209_like	NA|190aa|up_5|NZ_CP050975.1_5375973_5376543_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|352aa|up_4|NZ_CP050975.1_5378276_5379332_+	PRK13903, murB, UDP-N-acetylmuramate dehydrogenase	NA|211aa|up_3|NZ_CP050975.1_5379358_5379991_-	cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs	NA|347aa|up_2|NZ_CP050975.1_5380145_5381186_-	TIGR01430, Putative_adenosine/adenine_deaminase, adenosine deaminase	NA|409aa|up_1|NZ_CP050975.1_5381345_5382572_-	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|94aa|up_0|NZ_CP050975.1_5383002_5383284_+	PRK07597, secE, preprotein translocase subunit SecE; Reviewed	NA|145aa|down_0|NZ_CP050975.1_5384441_5384876_+	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|242aa|down_1|NZ_CP050975.1_5384981_5385707_+	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|300aa|down_2|NZ_CP050975.1_5385874_5386774_+	cd16334, LppX-like, family includes lipoproteins LppX, LprA, LprF and LprG from Mycobacterium tuberculosis	NA|278aa|down_3|NZ_CP050975.1_5386894_5387728_+	pfam07161, LppX_LprAFG, LppX_LprAFG lipoprotein	NA|177aa|down_4|NZ_CP050975.1_5388019_5388550_+	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|127aa|down_5|NZ_CP050975.1_5388659_5389040_+	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|1162aa|down_6|NZ_CP050975.1_5389678_5393164_+	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed	NA|1300aa|down_7|NZ_CP050975.1_5393275_5397175_+	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional	NA|157aa|down_8|NZ_CP050975.1_5397400_5397871_+	pfam08044, DUF1707, Domain of unknown function (DUF1707)	NA|420aa|down_9|NZ_CP050975.1_5397928_5399188_-	cd07337, M48B_HtpX_like, Peptidase M48 subfamily B HtpX-like membrane-bound metallopeptidase
GCF_012273515.1_ASM1227351v1	NZ_CP050975	Streptomyces sp. RPA4-2 chromosome, complete genome	9	5453677-5453798	7	CRISPRCasFinder	no		DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	Orphan	TGGGCGTCGATCGCTCGGTGACGGCGGGGTCG	32	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	NA,NA|185aa|down_0|NZ_CP050975.1_5453800_5454355_-,NA|86aa|down_4|NZ_CP050975.1_5456721_5456979_+	NA|148aa|up_9|NZ_CP050975.1_5440308_5440752_+	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|174aa|up_8|NZ_CP050975.1_5440794_5441316_+	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|453aa|up_7|NZ_CP050975.1_5441479_5442838_+	PRK14318, glmM, phosphoglucosamine mutase; Provisional	NA|313aa|up_6|NZ_CP050975.1_5442834_5443773_-	TIGR00271, Uncharacterized_protein_MJ0678, uncharacterized hydrophobic domain	NA|323aa|up_5|NZ_CP050975.1_5443808_5444777_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|616aa|up_4|NZ_CP050975.1_5444996_5446844_+	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|124aa|up_3|NZ_CP050975.1_5446982_5447354_+	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional	NA|306aa|up_2|NZ_CP050975.1_5449138_5450056_+	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD	NA|413aa|up_1|NZ_CP050975.1_5451480_5452719_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|178aa|up_0|NZ_CP050975.1_5452684_5453218_+	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE	NA|185aa|down_0|NZ_CP050975.1_5453800_5454355_-	NA	NA|216aa|down_1|NZ_CP050975.1_5454487_5455135_+	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ	NA|161aa|down_2|NZ_CP050975.1_5455152_5455635_+	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|366aa|down_3|NZ_CP050975.1_5455627_5456725_+	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	NA|86aa|down_4|NZ_CP050975.1_5456721_5456979_+	NA	NA|767aa|down_5|NZ_CP050975.1_5457076_5459377_-	PRK15098, PRK15098, beta-glucosidase BglX	NA|300aa|down_6|NZ_CP050975.1_5459426_5460326_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|292aa|down_7|NZ_CP050975.1_5460330_5461206_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|436aa|down_8|NZ_CP050975.1_5461238_5462546_-	cd14749, PBP2_XBP1_like, The periplasmic-binding component of ABC transport systems specific for xylo-oligosaccharides; possesses type 2 periplasmic binding fold	NA|343aa|down_9|NZ_CP050975.1_5462683_5463712_+	cd06296, PBP1_CatR-like, ligand-binding domain of a LacI-like transcriptional regulator, CatR which is involved in catechol degradation
GCF_012273515.1_ASM1227351v1	NZ_CP050975	Streptomyces sp. RPA4-2 chromosome, complete genome	10	7958185-7958273	8	CRISPRCasFinder	no		DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	Orphan	GATGACCCGGCCCTCGCCCGGAGGCACC	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	NA|165aa|up_5|NZ_CP050975.1_7952727_7953222_+,NA|110aa|up_3|NZ_CP050975.1_7954741_7955071_+,NA|153aa|up_1|NZ_CP050975.1_7956341_7956800_+,NA|55aa|down_0|NZ_CP050975.1_7958379_7958544_-,NA|283aa|down_5|NZ_CP050975.1_7963600_7964449_-,NA|115aa|down_8|NZ_CP050975.1_7966635_7966980_+,NA|142aa|down_9|NZ_CP050975.1_7967021_7967447_+	NA|403aa|up_9|NZ_CP050975.1_7946291_7947500_+	pfam13795, HupE_UreJ_2, HupE / UreJ protein	NA|660aa|up_8|NZ_CP050975.1_7947627_7949607_+	pfam16656, Pur_ac_phosph_N, Purple acid Phosphatase, N-terminal domain	NA|359aa|up_7|NZ_CP050975.1_7949681_7950758_+	pfam06030, DUF916, Bacterial protein of unknown function (DUF916)	NA|410aa|up_6|NZ_CP050975.1_7950866_7952096_-	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]	NA|165aa|up_5|NZ_CP050975.1_7952727_7953222_+	NA	NA|262aa|up_4|NZ_CP050975.1_7953662_7954448_+	pfam08787, Alginate_lyase2, Alginate lyase	NA|110aa|up_3|NZ_CP050975.1_7954741_7955071_+	NA	NA|190aa|up_2|NZ_CP050975.1_7955445_7956015_-	cd00293, USP_Like, Usp: Universal stress protein family	NA|153aa|up_1|NZ_CP050975.1_7956341_7956800_+	NA	NA|445aa|up_0|NZ_CP050975.1_7956813_7958148_+	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase	NA|55aa|down_0|NZ_CP050975.1_7958379_7958544_-	NA	NA|255aa|down_1|NZ_CP050975.1_7958963_7959728_-	cd05233, SDR_c, classical (c) SDRs	NA|397aa|down_2|NZ_CP050975.1_7960089_7961280_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|225aa|down_3|NZ_CP050975.1_7961546_7962221_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|420aa|down_4|NZ_CP050975.1_7962217_7963477_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|283aa|down_5|NZ_CP050975.1_7963600_7964449_-	NA	NA|317aa|down_6|NZ_CP050975.1_7964445_7965396_-	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter	NA|160aa|down_7|NZ_CP050975.1_7965720_7966200_-	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|115aa|down_8|NZ_CP050975.1_7966635_7966980_+	NA	NA|142aa|down_9|NZ_CP050975.1_7967021_7967447_+	NA
GCF_012273515.1_ASM1227351v1	NZ_CP050975	Streptomyces sp. RPA4-2 chromosome, complete genome	11	8275539-8275671	9	CRISPRCasFinder	no		DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	Orphan	GGTGAATGCACCGAAGAGCATCACTCCGTCCGTCGTCACCC	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,csa3,casR,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT	NA|331aa|up_5|NZ_CP050975.1_8266425_8267418_-,NA|73aa|down_9|NZ_CP050975.1_8286509_8286728_-	NA|328aa|up_9|NZ_CP050975.1_8262535_8263519_+	cd19086, AKR_AKR11C1, AKR11C family of aldo-keto reductase (AKR)	NA|207aa|up_8|NZ_CP050975.1_8263632_8264253_-	pfam09997, DUF2238, Predicted membrane protein (DUF2238)	NA|243aa|up_7|NZ_CP050975.1_8264497_8265226_+	pfam02909, TetR_C, Tetracyclin repressor, C-terminal all-alpha domain	NA|390aa|up_6|NZ_CP050975.1_8265230_8266400_+	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]	NA|331aa|up_5|NZ_CP050975.1_8266425_8267418_-	NA	NA|64aa|up_4|NZ_CP050975.1_8267729_8267921_+	pfam14404, Strep_pep, Ribosomally synthesized peptide in Streptomyces species	NA|299aa|up_3|NZ_CP050975.1_8267981_8268878_+	TIGR04187, conserved_hypothetical_protein, ATP-grasp ribosomal peptide maturase, SAV_5884 family	NA|546aa|up_2|NZ_CP050975.1_8268980_8270618_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|406aa|up_1|NZ_CP050975.1_8270824_8272042_-	PRK08243, PRK08243, 4-hydroxybenzoate 3-monooxygenase; Validated	NA|1093aa|up_0|NZ_CP050975.1_8272138_8275417_-	pfam17389, Bac_rhamnosid6H, Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain	NA|485aa|down_0|NZ_CP050975.1_8275738_8277193_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|342aa|down_1|NZ_CP050975.1_8277451_8278477_+	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)	NA|234aa|down_2|NZ_CP050975.1_8278698_8279400_-	pfam12697, Abhydrolase_6, Alpha/beta hydrolase family	NA|252aa|down_3|NZ_CP050975.1_8279483_8280239_-	COG1414, IclR, Transcriptional regulator [Transcription]	NA|250aa|down_4|NZ_CP050975.1_8280279_8281029_-	PRK08264, PRK08264, SDR family oxidoreductase	NA|255aa|down_5|NZ_CP050975.1_8281075_8281840_-	cd05233, SDR_c, classical (c) SDRs	NA|289aa|down_6|NZ_CP050975.1_8281836_8282703_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|446aa|down_7|NZ_CP050975.1_8282756_8284094_-	cd17367, MFS_KgtP, Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters	NA|128aa|down_8|NZ_CP050975.1_8285782_8286166_-	pfam01391, Collagen, Collagen triple helix repeat (20 copies)	NA|73aa|down_9|NZ_CP050975.1_8286509_8286728_-	NA
