assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_012272975.1_ASM1227297v1	NZ_CP050938	Piscirickettsia salmonis strain Ps-2192A chromosome, complete genome	1	576170-576290	1	CRISPRCasFinder	no		RT,DEDDh,csa3,cas3,DinG	Orphan	AGCTTATCAATGGTTAGTAGCCCTTGGACTTAATCAA	37	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,csa3,cas3,DinG	NA,NA|47aa|down_0|NZ_CP050938.1_576561_576702_-,NA|141aa|down_1|NZ_CP050938.1_576734_577157_+,NA|137aa|down_2|NZ_CP050938.1_577400_577811_-,NA|88aa|down_3|NZ_CP050938.1_578079_578343_-,NA|172aa|down_4|NZ_CP050938.1_578575_579091_-,NA|158aa|down_8|NZ_CP050938.1_584478_584952_+	NA|340aa|up_9|NZ_CP050938.1_565927_566947_+	TIGR00512, methylthioribose-1-phosphate_isomerase_predicted, S-methyl-5-thioribose-1-phosphate isomerase	NA|204aa|up_8|NZ_CP050938.1_566993_567605_+	PRK09220, PRK09220, methylthioribulose 1-phosphate dehydratase	NA|229aa|up_7|NZ_CP050938.1_567608_568295_+	cd01629, HAD_EP, Enolase-phosphatase similar to human enolase-phosphatase E1 and and Xanthomonas oryzae pv	NA|181aa|up_6|NZ_CP050938.1_568291_568834_+	COG1791, COG1791, Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]	NA|396aa|up_5|NZ_CP050938.1_569410_570598_-	PRK09550, mtnK, methylthioribose kinase; Reviewed	NA|242aa|up_4|NZ_CP050938.1_570843_571569_+	cd14843, D-Ala-D-Ala_dipeptidase_like, D-Ala-D-Ala dipeptidase, includes uncharacterized enzymes	NA|265aa|up_3|NZ_CP050938.1_571747_572542_+	pfam01863, DUF45, Protein of unknown function DUF45	NA|132aa|up_2|NZ_CP050938.1_572538_572934_-	pfam17775, UPF0225, UPF0225 domain	NA|161aa|up_1|NZ_CP050938.1_573788_574271_+	pfam01710, HTH_Tnp_IS630, Transposase	NA|192aa|up_0|NZ_CP050938.1_574216_574792_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|47aa|down_0|NZ_CP050938.1_576561_576702_-	NA	NA|141aa|down_1|NZ_CP050938.1_576734_577157_+	NA	NA|137aa|down_2|NZ_CP050938.1_577400_577811_-	NA	NA|88aa|down_3|NZ_CP050938.1_578079_578343_-	NA	NA|172aa|down_4|NZ_CP050938.1_578575_579091_-	NA	NA|337aa|down_5|NZ_CP050938.1_579235_580246_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|694aa|down_6|NZ_CP050938.1_580549_582631_-	cd14016, STKc_CK1, Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1	NA|420aa|down_7|NZ_CP050938.1_583086_584346_-	PRK14072, PRK14072, diphosphate--fructose-6-phosphate 1-phosphotransferase	NA|158aa|down_8|NZ_CP050938.1_584478_584952_+	NA	NA|461aa|down_9|NZ_CP050938.1_584960_586343_+	TIGR01081, mpl, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
GCF_012272975.1_ASM1227297v1	NZ_CP050938	Piscirickettsia salmonis strain Ps-2192A chromosome, complete genome	2	2974988-2975117	2	CRISPRCasFinder	no		RT,DEDDh,csa3,cas3,DinG	Orphan	TTAAAAAATACAATAAAGAAAAACGATGCCTTCTCCTTACAGTTAT	46	1	53	2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071|2975034-2975071	NZ_CP050947.1_3606-3643|NZ_CP050946.1_27867-27904|NZ_CP050943.1_3174-3211|NZ_CP050938.1_404035-404072|NZ_CP050938.1_894614-894651|NZ_CP050938.1_992116-992153|NZ_CP050938.1_1069934-1069971|NZ_CP050938.1_1072852-1072889|NZ_CP050938.1_1181417-1181454|NZ_CP050938.1_1239416-1239453|NZ_CP050938.1_1315585-1315622|NZ_CP050938.1_1355515-1355552|NZ_CP050938.1_1556048-1556085|NZ_CP050938.1_2173717-2173754|NZ_CP050938.1_2207687-2207724|NZ_CP050938.1_2279864-2279901|NZ_CP050938.1_2391364-2391401|NZ_CP050938.1_2419763-2419800|NZ_CP050938.1_2422568-2422605|NZ_CP050938.1_2651415-2651452|NZ_CP050938.1_2768520-2768557|NZ_CP050938.1_2819875-2819912|NZ_CP050938.1_2875744-2875781|NZ_CP050938.1_3122971-3123008|NZ_CP050938.1_3228993-3229030|NZ_CP050938.1_170255-170218|NZ_CP050938.1_174927-174890|NZ_CP050938.1_218244-218207|NZ_CP050938.1_496849-496812|NZ_CP050938.1_897922-897885|NZ_CP050938.1_998106-998069|NZ_CP050938.1_1305614-1305577|NZ_CP050938.1_1343655-1343618|NZ_CP050938.1_1485567-1485530|NZ_CP050938.1_1535375-1535338|NZ_CP050938.1_1560769-1560732|NZ_CP050938.1_1726930-1726893|NZ_CP050938.1_1756700-1756663|NZ_CP050938.1_1881976-1881939|NZ_CP050938.1_1916056-1916019|NZ_CP050938.1_1938143-1938106|NZ_CP050938.1_2374787-2374750|NZ_CP050938.1_2429612-2429575|NZ_CP050938.1_2531684-2531647|NZ_CP050938.1_2589495-2589458|NZ_CP050938.1_2627603-2627566|NZ_CP050938.1_2877110-2877073|NZ_CP050938.1_2998128-2998091|NZ_CP050938.1_3079381-3079344|NZ_CP050938.1_3127141-3127104|NZ_CP050938.1_3138008-3137971|NZ_CP050938.1_2171229-2171192|NZ_CP050945.1_13627-13590	NA	1	1	Orphan	RT,DEDDh,csa3,cas3,DinG	NA|262aa|up_9|NZ_CP050938.1_2966181_2966967_-,NA|192aa|up_5|NZ_CP050938.1_2970425_2971001_-,NA|128aa|up_4|NZ_CP050938.1_2971273_2971657_-,NA|284aa|up_3|NZ_CP050938.1_2971861_2972713_-,NA|99aa|up_2|NZ_CP050938.1_2972830_2973127_-,NA|233aa|up_1|NZ_CP050938.1_2973143_2973842_-,NA|97aa|up_0|NZ_CP050938.1_2973879_2974170_-,NA|105aa|down_0|NZ_CP050938.1_2976023_2976338_+,NA|65aa|down_4|NZ_CP050938.1_2980218_2980413_+,NA|73aa|down_7|NZ_CP050938.1_2983287_2983506_+,NA|243aa|down_8|NZ_CP050938.1_2984368_2985097_+,NA|290aa|down_9|NZ_CP050938.1_2985241_2986111_+	NA|262aa|up_9|NZ_CP050938.1_2966181_2966967_-	NA	NA|315aa|up_8|NZ_CP050938.1_2967271_2968216_+	PRK10260, PRK10260, L,D-transpeptidase; Provisional	NA|395aa|up_7|NZ_CP050938.1_2968234_2969419_-	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|278aa|up_6|NZ_CP050938.1_2969534_2970368_+	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|192aa|up_5|NZ_CP050938.1_2970425_2971001_-	NA	NA|128aa|up_4|NZ_CP050938.1_2971273_2971657_-	NA	NA|284aa|up_3|NZ_CP050938.1_2971861_2972713_-	NA	NA|99aa|up_2|NZ_CP050938.1_2972830_2973127_-	NA	NA|233aa|up_1|NZ_CP050938.1_2973143_2973842_-	NA	NA|97aa|up_0|NZ_CP050938.1_2973879_2974170_-	NA	NA|105aa|down_0|NZ_CP050938.1_2976023_2976338_+	NA	NA|192aa|down_1|NZ_CP050938.1_2976283_2976859_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|468aa|down_2|NZ_CP050938.1_2976909_2978313_-	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like	NA|353aa|down_3|NZ_CP050938.1_2978474_2979533_-	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|65aa|down_4|NZ_CP050938.1_2980218_2980413_+	NA	NA|329aa|down_5|NZ_CP050938.1_2980550_2981537_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|85aa|down_6|NZ_CP050938.1_2982259_2982514_-	PRK08116, PRK08116, hypothetical protein; Validated	NA|73aa|down_7|NZ_CP050938.1_2983287_2983506_+	NA	NA|243aa|down_8|NZ_CP050938.1_2984368_2985097_+	NA	NA|290aa|down_9|NZ_CP050938.1_2985241_2986111_+	NA
GCF_012272975.1_ASM1227297v1	NZ_CP050945	Piscirickettsia salmonis strain Ps-2192A plasmid Ps2192A-p7, complete sequence	1	99348-99571	1	CRT	no	RT	RT	Unclear	TTTGTGTTCCGTTTGTGTTCCGTTT	25	0	0	NA	NA	NA	3	3	Orphan	RT,DEDDh,csa3,cas3,DinG	NA|73aa|up_5|NZ_CP050945.1_91675_91894_-,NA|155aa|up_3|NZ_CP050945.1_92383_92848_-,NA|86aa|up_2|NZ_CP050945.1_93981_94239_+,NA|49aa|down_4|NZ_CP050945.1_103737_103884_-,NA|343aa|down_6|NZ_CP050945.1_106635_107664_-,NA|138aa|down_9|NZ_CP050945.1_110338_110752_+	NA|229aa|up_9|NZ_CP050945.1_86587_87274_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|189aa|up_8|NZ_CP050945.1_87277_87844_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|453aa|up_7|NZ_CP050945.1_87933_89292_+	cd18013, DEXQc_bact_SNF2, DEXQ-box helicase domain of bacterial SNF2 family proteins	NA|243aa|up_6|NZ_CP050945.1_89475_90204_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|73aa|up_5|NZ_CP050945.1_91675_91894_-	NA	NA|49aa|up_4|NZ_CP050945.1_91874_92021_-	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain	NA|155aa|up_3|NZ_CP050945.1_92383_92848_-	NA	NA|86aa|up_2|NZ_CP050945.1_93981_94239_+	NA	NA|326aa|up_1|NZ_CP050945.1_94257_95235_+	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	NA|859aa|up_0|NZ_CP050945.1_95351_97928_-	TIGR00601, UV_excision_repair_protein_RAD23_homolog_A, UV excision repair protein Rad23	NA|340aa|down_0|NZ_CP050945.1_99782_100802_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|197aa|down_1|NZ_CP050945.1_101756_102347_-	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|165aa|down_2|NZ_CP050945.1_102592_103087_-	pfam04986, Y2_Tnp, Putative transposase	NA|103aa|down_3|NZ_CP050945.1_103099_103408_-	pfam04986, Y2_Tnp, Putative transposase	NA|49aa|down_4|NZ_CP050945.1_103737_103884_-	NA	RT|376aa|down_5|NZ_CP050945.1_104104_105232_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|343aa|down_6|NZ_CP050945.1_106635_107664_-	NA	NA|385aa|down_7|NZ_CP050945.1_108292_109446_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|243aa|down_8|NZ_CP050945.1_109512_110241_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|138aa|down_9|NZ_CP050945.1_110338_110752_+	NA
