The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015195	Pasteurellaceae bacterium RH1A chromosome, complete genome	2314446	1145690	1258454	2314446	head,tRNA,transposase,plate,terminase,tail	Burkholderia_virus(13.33%)	106	NA	NA
WP_168111124.1|1145690_1146890_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_168111209.1|1147106_1148273_+	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_168111210.1|1148274_1149147_+	succinate--CoA ligase subunit alpha	NA	NA	NA	NA	NA
WP_168111211.1|1149398_1150178_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_168111212.1|1150286_1150865_+	replication initiation negative regulator SeqA	NA	NA	NA	NA	NA
WP_168111213.1|1150967_1152368_+	o-succinylbenzoate--CoA ligase	NA	NA	NA	NA	NA
WP_168111214.1|1155792_1156875_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	47.0	1.7e-88
WP_168111215.1|1156990_1160293_+	mechanosensitive channel MscK	NA	NA	NA	NA	NA
WP_168111216.1|1160400_1161231_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA	NA
WP_168111217.1|1161356_1162691_+	chromosome partition protein MukF	NA	NA	NA	NA	NA
WP_168111218.1|1162749_1163454_+	chromosome partition protein MukE	NA	NA	NA	NA	NA
WP_168112214.1|1163717_1164608_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_168111219.1|1164794_1165190_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_168111220.1|1165252_1166230_-	nickel/cobalt transporter	NA	NA	NA	NA	NA
WP_168111221.1|1166217_1166856_-	DUF1007 family protein	NA	NA	NA	NA	NA
WP_168111222.1|1167385_1168276_-	transcriptional regulator GcvA	NA	Q6JIH3	Burkholderia_virus	31.2	1.2e-23
WP_168111223.1|1168714_1169740_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA	NA
WP_168111224.1|1169867_1170212_+	RidA family protein	NA	NA	NA	NA	NA
WP_168111225.1|1170319_1171960_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_168111226.1|1171988_1172348_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_168111227.1|1172601_1173816_+	serine/threonine transporter SstT	NA	NA	NA	NA	NA
WP_168111228.1|1174090_1176490_+	glycogen/starch/alpha-glucan family phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	42.0	1.3e-11
WP_168111229.1|1179455_1179770_-	DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_168111230.1|1179762_1180134_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_168111231.1|1180198_1180582_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_168111232.1|1180728_1181730_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168111233.1|1181826_1182279_-	ci repressor-like protein	NA	NA	NA	NA	NA
WP_168111234.1|1182509_1182740_+	transcriptional regulator	NA	M1PVU4	Vibrio_phage	63.5	1.3e-14
WP_168111235.1|1182730_1184695_+|transposase	transposase	transposase	M4M9R2	Vibrio_phage	44.5	5.6e-138
WP_168111236.1|1184769_1185189_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168111237.1|1185487_1186405_+	AAA family ATPase	NA	M4M9P4	Vibrio_phage	46.3	1.4e-67
WP_168111238.1|1186405_1186708_+	hypothetical protein	NA	A0A0M3LQH1	Mannheimia_phage	40.2	3.4e-10
WP_168111239.1|1186716_1187238_+	host-nuclease inhibitor protein Gam	NA	F6MIJ0	Haemophilus_phage	80.0	2.4e-72
WP_168111240.1|1187411_1187600_+	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_168111241.1|1187609_1187804_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168111242.1|1187916_1188624_+	DUF2786 domain-containing protein	NA	A0A1W6DYA0	Aeromonas_phage	33.5	1.1e-22
WP_168111243.1|1188616_1189174_+	DUF1018 domain-containing protein	NA	NA	NA	NA	NA
WP_168111244.1|1189170_1189734_+	hypothetical protein	NA	A0A0M3LPP6	Mannheimia_phage	50.0	1.1e-43
WP_168111245.1|1189884_1190241_+	transcriptional regulator	NA	Q6QIE8	Burkholderia_phage	49.2	5.7e-25
WP_168111246.1|1190328_1190856_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168111247.1|1190873_1191095_+	excalibur calcium-binding domain-containing protein	NA	A0A0R6PHV6	Moraxella_phage	76.3	1.8e-08
WP_168111248.1|1191188_1191737_+	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	78.5	1.2e-82
WP_168110281.1|1191740_1191896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168111249.1|1191895_1192111_+	DUF2644 domain-containing protein	NA	F6MIK0	Haemophilus_phage	77.1	3.2e-23
WP_168111250.1|1192107_1192506_+	DUF2681 domain-containing protein	NA	NA	NA	NA	NA
WP_168111251.1|1192505_1192835_+	DUF2730 family protein	NA	NA	NA	NA	NA
WP_168111252.1|1192837_1193128_+	hypothetical protein	NA	A0A0C4UR00	Shigella_phage	58.9	5.2e-24
WP_168111253.1|1193149_1193719_+	DUF3486 family protein	NA	A0A2I7S9D1	Vibrio_phage	40.9	3.1e-33
WP_168112262.1|1193699_1195013_+|terminase	terminase	terminase	A0A2P9JZI8	Alteromonadaceae_phage	62.8	1.3e-151
WP_168111254.1|1195138_1196584_+	DUF935 family protein	NA	A4JWJ5	Burkholderia_virus	44.9	1.1e-106
WP_168111255.1|1196580_1197834_+|head	phage head morphogenesis protein	head	J9STS2	Pseudomonas_phage	51.7	2.8e-58
WP_168111256.1|1197954_1198416_+	phage virion morphogenesis protein	NA	R9U1C4	Rhizobium_phage	35.1	3.5e-14
WP_168111257.1|1198676_1199639_+	peptidase	NA	A4JWJ9	Burkholderia_virus	36.2	2.8e-50
WP_168111258.1|1199652_1200591_+	inorganic pyrophosphatase	NA	A4JWK0	Burkholderia_virus	55.3	8.2e-87
WP_168111259.1|1200680_1200965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168111260.1|1200948_1201386_+	DUF1320 domain-containing protein	NA	A4JWK2	Burkholderia_virus	36.6	2.7e-16
WP_168111261.1|1201385_1201898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168111262.1|1201899_1203297_+|tail	phage tail protein	tail	A4JWK5	Burkholderia_virus	44.7	9.6e-100
WP_168111263.1|1203296_1203818_+|tail	phage major tail tube protein	tail	Q858V0	Yersinia_virus	26.1	4.9e-09
WP_168111264.1|1203909_1204194_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_168112263.1|1204171_1204324_+|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_168111265.1|1204308_1204593_-	hypothetical protein	NA	NA	NA	NA	NA
WP_168111266.1|1204637_1207211_+|tail	phage tail tape measure protein	tail	A0A2H4JGB2	uncultured_Caudovirales_phage	24.0	2.8e-28
WP_168111267.1|1207210_1208143_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_168111268.1|1208135_1208366_+	hypothetical protein	NA	Q6QIA3	Burkholderia_phage	40.3	5.2e-11
WP_168111269.1|1208362_1209421_+	hypothetical protein	NA	Q6QIA2	Burkholderia_phage	42.4	2.7e-62
WP_168111270.1|1209395_1209977_+|plate	phage baseplate assembly protein V	plate	NA	NA	NA	NA
WP_168111271.1|1210057_1210441_+|plate	phage baseplate protein	plate	NA	NA	NA	NA
WP_168111272.1|1210430_1211546_+|plate	baseplate J/gp47 family protein	plate	Q6QI99	Burkholderia_phage	41.6	2.2e-67
WP_168111273.1|1211538_1212108_+|tail	phage tail protein	tail	Q6QI98	Burkholderia_phage	45.8	1.3e-39
WP_168111274.1|1212117_1214664_+|tail	tail fiber protein	tail	Q94MY0	Haemophilus_virus	43.7	6.1e-52
WP_168111275.1|1214673_1215297_+	DUF4376 domain-containing protein	NA	F6MIL9	Haemophilus_phage	56.7	2.0e-57
WP_168111276.1|1215289_1215760_+	enoyl-CoA hydratase	NA	F6MIM0	Haemophilus_phage	73.4	1.8e-66
WP_168111277.1|1215896_1216685_+	hypothetical protein	NA	F6MIM2	Haemophilus_phage	68.7	3.0e-106
WP_168111278.1|1216799_1217345_+	transferrin-binding protein-like solute binding protein	NA	NA	NA	NA	NA
WP_168111279.1|1217408_1218809_+	DUF560 domain-containing protein	NA	NA	NA	NA	NA
WP_168111280.1|1220324_1221368_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_168111281.1|1221437_1222421_+	elongation factor P--(R)-beta-lysine ligase	NA	A0A2K9L0E9	Tupanvirus	20.8	1.2e-08
WP_168111282.1|1222417_1222969_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	NA	NA	NA	NA
WP_168111283.1|1223027_1223867_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_168111284.1|1223917_1224559_+	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_168111285.1|1224694_1225780_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	A0A218MNE0	uncultured_virus	44.4	1.4e-82
WP_168111286.1|1225862_1226912_+	ferric ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.7	2.0e-33
WP_168111287.1|1226992_1228033_+	selenide, water dikinase SelD	NA	NA	NA	NA	NA
WP_168111288.1|1228032_1229229_+	2-octaprenyl-6-methoxyphenyl hydroxylase	NA	NA	NA	NA	NA
WP_168111289.1|1229313_1230276_-	23S rRNA pseudouridine(955/2504/2580) synthase RluC	NA	NA	NA	NA	NA
WP_168111290.1|1230595_1232179_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_168111291.1|1232490_1233444_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_168111292.1|1233443_1235399_+	dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.5	4.3e-13
WP_168111293.1|1235400_1236210_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.8	7.4e-20
WP_168112224.1|1236358_1236970_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_168111294.1|1237398_1239111_-	DUF3413 domain-containing protein	NA	NA	NA	NA	NA
WP_168111295.1|1239114_1239339_-	YejL family protein	NA	NA	NA	NA	NA
WP_168111296.1|1239690_1239867_+	type II toxin-antitoxin system HicA family toxin	NA	A0A0R6PJD4	Moraxella_phage	59.3	2.5e-13
WP_168111297.1|1239885_1240287_+	type II toxin-antitoxin system HicB family antitoxin	NA	Q775F5	Haemophilus_virus	58.6	1.7e-41
WP_168111298.1|1240473_1240716_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	45.0	1.3e-12
WP_168111299.1|1240705_1240996_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	63.8	4.2e-26
WP_168112264.1|1241052_1241490_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_168111300.1|1242316_1251580_+	hypothetical protein	NA	K4IGJ8	Salmonella_phage	47.4	4.7e-09
WP_168111301.1|1251807_1252020_+	50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_168111302.1|1252101_1252992_+	HTH-type transcriptional activator IlvY	NA	NA	NA	NA	NA
WP_168111303.1|1253069_1253426_-	hypothetical protein	NA	NA	NA	NA	NA
WP_168112214.1|1253559_1254450_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_168111304.1|1254576_1255980_-|tRNA	asparagine--tRNA ligase	tRNA	A0A1V0SDB6	Indivirus	36.6	1.3e-80
WP_168111305.1|1256404_1257715_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_168111306.1|1257734_1258454_+|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	tRNA	NA	NA	NA	NA
>prophage 2
NZ_CP015195	Pasteurellaceae bacterium RH1A chromosome, complete genome	2314446	1285101	1293456	2314446	tRNA	Mannheimia_phage(28.57%)	10	NA	NA
WP_168111334.1|1285101_1285371_+	BrnT family toxin	NA	K4NX81	Burkholderia_phage	36.5	2.2e-08
WP_168111335.1|1285354_1285666_+	BrnA antitoxin family protein	NA	A0A2H4J5Y5	uncultured_Caudovirales_phage	47.3	2.0e-05
WP_168111336.1|1285890_1286910_+	DUF4325 domain-containing protein	NA	NA	NA	NA	NA
WP_168111337.1|1287057_1287483_-	HD domain-containing protein	NA	D0UIJ3	Aggregatibacter_phage	60.1	1.0e-36
WP_168111338.1|1287479_1287698_-	hypothetical protein	NA	A0A0M3LPI7	Mannheimia_phage	77.8	2.2e-27
WP_168111339.1|1287697_1288276_-	hypothetical protein	NA	A0A0M3LQ07	Mannheimia_phage	62.0	1.6e-61
WP_168111340.1|1288425_1289871_+	catalase	NA	A0A2K9L572	Tupanvirus	39.1	2.8e-94
WP_168111341.1|1289949_1290210_-	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_168111342.1|1290206_1290458_-	YoeB-YefM toxin-antitoxin system antitoxin YefM	NA	NA	NA	NA	NA
WP_168111343.1|1292151_1293456_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	52.4	3.3e-94
