assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_012167385.1_ASM1216738v1	NZ_CP050845	Klebsiella pneumoniae strain Bckp206 chromosome, complete genome	1	1015625-1017420	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,WYL,RT	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	29,29,25	29	TypeI-E	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,WYL,RT	NA,NA	NA|571aa|up_9|NZ_CP050845.1_1004332_1006045_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP050845.1_1006143_1006878_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|888aa|up_7|NZ_CP050845.1_1007084_1009748_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|519aa|up_6|NZ_CP050845.1_1009759_1011316_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|181aa|up_5|NZ_CP050845.1_1011312_1011855_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_4|NZ_CP050845.1_1011873_1012929_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP050845.1_1012939_1013686_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP050845.1_1013667_1014318_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|NZ_CP050845.1_1014314_1015235_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP050845.1_1015234_1015528_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|674aa|down_0|NZ_CP050845.1_1017500_1019522_-	cd18422, BTB_POZ_KCNG3, BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium voltage-gated channel subfamily G member 3 (KCNG3)	NA|396aa|down_1|NZ_CP050845.1_1019508_1020696_-	pfam11340, DUF3142, Protein of unknown function (DUF3142)	NA|352aa|down_2|NZ_CP050845.1_1020731_1021787_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|469aa|down_3|NZ_CP050845.1_1022033_1023440_+	PRK10637, cysG, siroheme synthase CysG	NA|303aa|down_4|NZ_CP050845.1_1023449_1024358_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_5|NZ_CP050845.1_1024367_1025795_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_6|NZ_CP050845.1_1025794_1026400_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|109aa|down_7|NZ_CP050845.1_1026450_1026777_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|106aa|down_8|NZ_CP050845.1_1026917_1027235_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_9|NZ_CP050845.1_1027254_1027965_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase
GCF_012167385.1_ASM1216738v1	NZ_CP050845	Klebsiella pneumoniae strain Bckp206 chromosome, complete genome	2	3991557-3991821	2	PILER-CR	no	RT	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,WYL,RT	Unclear	ACGGAGCCGCTTTATGCCGGGTGGCGGCTGCGCCTTACCCGGCCTACAGGGC	52	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,WYL,RT	NA|548aa|up_9|NZ_CP050845.1_3980435_3982079_-,NA|57aa|up_0|NZ_CP050845.1_3991118_3991289_+,NA|64aa|down_6|NZ_CP050845.1_3999770_3999962_+	NA|548aa|up_9|NZ_CP050845.1_3980435_3982079_-	NA	NA|842aa|up_8|NZ_CP050845.1_3982068_3984594_-	pfam15976, CooC_C, CS1-pili formation C-terminal	NA|223aa|up_7|NZ_CP050845.1_3984619_3985288_-	pfam18649, EcpB_C, EcpB C-terminal domain	NA|196aa|up_6|NZ_CP050845.1_3985346_3985934_-	pfam16449, MatB, Fimbrillin MatB	NA|181aa|up_5|NZ_CP050845.1_3986008_3986551_-	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins	NA|281aa|up_4|NZ_CP050845.1_3987399_3988242_+	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|313aa|up_3|NZ_CP050845.1_3988264_3989203_+	TIGR03431, PhnD, phosphonate ABC transporter, periplasmic phosphonate binding protein	NA|291aa|up_2|NZ_CP050845.1_3989269_3990142_+	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE	NA|295aa|up_1|NZ_CP050845.1_3990138_3991023_+	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE	NA|57aa|up_0|NZ_CP050845.1_3991118_3991289_+	NA	NA|222aa|down_0|NZ_CP050845.1_3991877_3992543_-	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C	NA|290aa|down_1|NZ_CP050845.1_3992638_3993508_-	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional	NA|189aa|down_2|NZ_CP050845.1_3993919_3994486_+	PRK10838, spr, bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	NA|351aa|down_3|NZ_CP050845.1_3994531_3995584_-	PRK10159, PRK10159, phosphoporin PhoE	NA|368aa|down_4|NZ_CP050845.1_3995873_3996977_+	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|418aa|down_5|NZ_CP050845.1_3996987_3998241_+	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|64aa|down_6|NZ_CP050845.1_3999770_3999962_+	NA	RT|499aa|down_7|NZ_CP050845.1_4000646_4002143_+	cd03487, RT_Bac_retron_II, RT_Bac_retron_II: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons	NA|278aa|down_8|NZ_CP050845.1_4002707_4003541_-	pfam01844, HNH, HNH endonuclease	NA|882aa|down_9|NZ_CP050845.1_4004219_4006865_-	COG2909, MalT, ATP-dependent transcriptional regulator [Transcription]
GCF_012167385.1_ASM1216738v1	NZ_CP050845	Klebsiella pneumoniae strain Bckp206 chromosome, complete genome	3	4252388-4252482	2	CRISPRCasFinder	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,WYL,RT	Orphan	ACTATGGTTTTTATGGTTTTTATT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,WYL,RT	NA|57aa|up_8|NZ_CP050845.1_4239434_4239605_+,NA	NA|282aa|up_9|NZ_CP050845.1_4238603_4239449_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|57aa|up_8|NZ_CP050845.1_4239434_4239605_+	NA	NA|570aa|up_7|NZ_CP050845.1_4239786_4241496_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_6|NZ_CP050845.1_4241506_4243009_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|up_5|NZ_CP050845.1_4243146_4243842_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|786aa|up_4|NZ_CP050845.1_4244017_4246375_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|up_3|NZ_CP050845.1_4246562_4249469_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|up_2|NZ_CP050845.1_4249481_4250141_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|180aa|up_1|NZ_CP050845.1_4250215_4250755_-	TIGR03124, citrate_citX, holo-ACP synthase CitX	NA|455aa|up_0|NZ_CP050845.1_4250934_4252299_-	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family	NA|542aa|down_0|NZ_CP050845.1_4252623_4254249_+	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]	NA|233aa|down_1|NZ_CP050845.1_4254238_4254937_+	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|276aa|down_2|NZ_CP050845.1_4254969_4255797_-	PRK09430, djlA, co-chaperone DjlA	NA|783aa|down_3|NZ_CP050845.1_4256040_4258389_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_4|NZ_CP050845.1_4258443_4259730_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_5|NZ_CP050845.1_4259735_4260725_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_6|NZ_CP050845.1_4260721_4261543_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|126aa|down_7|NZ_CP050845.1_4261545_4261923_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|283aa|down_8|NZ_CP050845.1_4261927_4262776_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|160aa|down_9|NZ_CP050845.1_4263028_4263508_-	PRK10769, folA, type 3 dihydrofolate reductase
