The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP050690	Staphylococcus aureus strain PMB179-1 chromosome, complete genome	2741492	185890	194363	2741492		Synechococcus_phage(33.33%)	9	NA	NA
WP_000238675.1|185890_186457_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.7	7.2e-30
WP_000030811.1|186459_187488_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000483713.1|187480_188965_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000032733.1|188943_191133_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	2.7e-141
WP_000666806.1|191125_191797_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000848350.1|191798_192062_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174044.1|192061_192766_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	41.6	8.1e-47
WP_001010414.1|192769_193894_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000861572.1|193880_194363_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
>prophage 2
NZ_CP050690	Staphylococcus aureus strain PMB179-1 chromosome, complete genome	2741492	214532	268494	2741492	bacteriocin,transposase,protease	Streptococcus_phage(28.57%)	53	NA	NA
WP_001089097.1|214532_215714_+|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
WP_000284457.1|215751_216081_+	staphostatin B	NA	NA	NA	NA	NA
WP_000184947.1|216318_217140_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_000150223.1|217132_217936_-	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
WP_000526685.1|217922_219596_-	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
WP_072399156.1|219582_220794_-	isochorismate synthase	NA	NA	NA	NA	NA
WP_001791731.1|220870_220975_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000070966.1|221125_222064_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_000620949.1|222115_222667_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001788574.1|222756_223047_+	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	38.0	7.5e-07
WP_167774932.1|223110_223242_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001081344.1|223287_224247_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000766009.1|224734_225091_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000719184.1|225179_226661_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_000410720.1|226666_226954_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072361064.1|227232_227523_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000571167.1|227610_228252_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.0	1.7e-19
WP_000668627.1|228248_228569_-	YxeA family protein	NA	NA	NA	NA	NA
WP_167774934.1|228571_230536_-|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_001797239.1|230579_230852_-|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_167774936.1|230861_230963_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001033865.1|231877_232480_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_111122677.1|232494_232671_-	DUF2187 family protein	NA	NA	NA	NA	NA
WP_000668818.1|232869_233856_+	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000876826.1|233936_234155_-	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000287265.1|234364_234934_+	competence protein ComK	NA	NA	NA	NA	NA
WP_000414185.1|235420_236932_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000021865.1|237070_238429_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000455278.1|238445_240770_-|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
WP_000928413.1|240988_241792_-	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_001049951.1|242093_243656_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	1.7e-36
WP_001795833.1|243655_243916_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167774937.1|243896_245381_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_000258650.1|245813_246989_+	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_001794241.1|246948_248157_+	MFS transporter	NA	NA	NA	NA	NA
WP_167774938.1|248269_248779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000889191.1|248972_249731_-	esterase family protein	NA	NA	NA	NA	NA
WP_000570700.1|249875_251444_-	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_000933105.1|251784_252870_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000933195.1|253065_253836_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000395152.1|254112_255957_-	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_167774939.1|255966_257352_-	magnesium transporter	NA	NA	NA	NA	NA
WP_000669923.1|257372_258227_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_001270834.1|258223_259033_-	NAD kinase	NA	NA	NA	NA	NA
WP_001077683.1|259049_259685_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001242102.1|259701_260049_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000224619.1|260234_260828_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_000214069.1|260931_261297_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000896697.1|261319_262126_+	DsbA family protein	NA	NA	NA	NA	NA
WP_000082725.1|262584_264393_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
WP_000959289.1|264440_265427_-	competence protein CoiA	NA	NA	NA	NA	NA
WP_001217728.1|265547_266267_-	adaptor protein MecA	NA	NA	NA	NA	NA
WP_000277718.1|266847_268494_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	97.4	7.2e-288
>prophage 3
NZ_CP050690	Staphylococcus aureus strain PMB179-1 chromosome, complete genome	2741492	446654	461328	2741492		uncultured_Caudovirales_phage(50.0%)	13	NA	NA
WP_000616842.1|446654_447416_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
WP_001245577.1|447412_448369_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000876318.1|448355_449327_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_000562498.1|449922_450894_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000855505.1|451011_453117_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000692521.1|453079_453478_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_001068497.1|454278_455145_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930014.1|455164_455665_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_000193751.1|456005_457511_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_031835073.1|457588_457690_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429006.1|457780_458698_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_000197275.1|459377_459920_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000663026.1|460269_461328_-	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	27.3	1.5e-20
>prophage 4
NZ_CP050690	Staphylococcus aureus strain PMB179-1 chromosome, complete genome	2741492	473298	481117	2741492		Pandoravirus(16.67%)	10	NA	NA
WP_001217794.1|473298_474450_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	3.5e-23
WP_000604515.1|474433_475027_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	43.5	1.2e-38
WP_000446724.1|475377_476046_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000941336.1|476047_476467_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_001062972.1|476470_477184_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000637687.1|477282_477867_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093561.1|478146_478587_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037807.1|478927_479401_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|479375_480062_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244415.1|480061_481117_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
>prophage 5
NZ_CP050690	Staphylococcus aureus strain PMB179-1 chromosome, complete genome	2741492	1907863	1913542	2741492		Staphylococcus_phage(100.0%)	6	NA	NA
WP_000791411.1|1907863_1908919_+	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_167775000.1|1908940_1909957_+	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	5.1e-26
WP_000727643.1|1911256_1911706_-	chemotaxis-inhibiting protein CHIPS	NA	A7TWR9	Staphylococcus_phage	100.0	1.5e-78
WP_000702262.1|1912388_1912739_+	complement inhibitor SCIN-A	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|1912791_1913052_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669789.1|1913362_1913542_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
>prophage 6
NZ_CP050690	Staphylococcus aureus strain PMB179-1 chromosome, complete genome	2741492	2007581	2054353	2741492	tRNA,protease	Staphylococcus_phage(87.5%)	43	NA	NA
WP_001792805.1|2007581_2008724_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_000181394.1|2008728_2009199_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_001251224.1|2009356_2009956_+	glucosamine-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_000031108.1|2009980_2010133_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000901021.1|2011259_2011655_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000116224.1|2011850_2013236_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_000437961.1|2014679_2015792_+	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_001045133.1|2015813_2016437_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000375864.1|2016792_2017257_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000992516.1|2017435_2018560_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_000290301.1|2018628_2018973_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
WP_001802255.1|2019465_2019564_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000238227.1|2019854_2021051_+	exonuclease SbcCD subunit D	NA	NA	NA	NA	NA
WP_000584628.1|2021040_2023977_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_001244171.1|2023973_2024915_+	3'-5' exoribonuclease YhaM	NA	NA	NA	NA	NA
WP_000782121.1|2025035_2025998_-	foldase	NA	NA	NA	NA	NA
WP_000477959.1|2026202_2026760_-	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000648118.1|2027492_2027858_-	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_000004988.1|2027999_2028422_-	HIT family protein	NA	NA	NA	NA	NA
WP_000216874.1|2028555_2029296_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
WP_000551840.1|2029288_2030512_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000737978.1|2030635_2031139_-	signal transduction protein TRAP	NA	NA	NA	NA	NA
WP_001790154.1|2031301_2031412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000162881.1|2032495_2033419_+	ferrochelatase	NA	NA	NA	NA	NA
WP_000132890.1|2035163_2035718_+	serine hydrolase family protein	NA	NA	NA	NA	NA
WP_000206349.1|2038100_2038889_-	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.0	1.0e-138
WP_001086053.1|2038901_2039357_-	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.8	1.7e-61
WP_000473596.1|2040250_2041186_+	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
WP_000782463.1|2041187_2042171_+	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
WP_000543848.1|2042540_2043332_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000550254.1|2043336_2043810_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025174387.1|2044065_2044284_+	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	80.6	9.2e-26
WP_167775003.1|2044755_2045325_-	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	62.6	2.6e-51
WP_025174851.1|2046288_2046996_+|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	95.7	2.4e-123
WP_001039455.1|2047120_2047843_+|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.2	1.2e-130
WP_001038866.1|2047900_2048620_+|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	3.5e-130
WP_001038723.1|2048740_2049460_+|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	97.9	4.3e-128
WP_103150108.1|2049408_2049516_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038760.1|2049617_2050334_+|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	99.6	3.2e-131
WP_001038693.1|2050484_2051204_+|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.2	1.2e-130
WP_031835054.1|2051270_2051405_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000028658.1|2051568_2053125_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.0	3.4e-287
WP_000072556.1|2053117_2054353_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	37.2	6.4e-47
>prophage 7
NZ_CP050690	Staphylococcus aureus strain PMB179-1 chromosome, complete genome	2741492	2063543	2111240	2741492	tRNA,protease	Staphylococcus_phage(94.59%)	44	NA	NA
WP_000864136.1|2063543_2064101_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	96.8	3.7e-79
WP_000414214.1|2064298_2064871_-	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	96.6	1.1e-25
WP_000627537.1|2064971_2065313_-	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	95.6	3.0e-55
WP_000669027.1|2065353_2065980_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	93.8	5.3e-90
WP_000070655.1|2066055_2067051_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	98.8	6.2e-77
WP_167775005.1|2067131_2067782_-	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	88.0	2.7e-44
WP_072414246.1|2068084_2068540_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	1.5e-78
WP_000348365.1|2068698_2070177_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
WP_000778538.1|2070181_2071183_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.0	9.0e-185
WP_000718107.1|2071179_2071437_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000672015.1|2071502_2071976_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	99.4	5.5e-84
WP_167775033.1|2071980_2072727_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	7.1e-142
WP_000109906.1|2073104_2074697_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_000933822.1|2075068_2076262_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000366155.1|2076386_2077295_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	99.0	1.7e-137
WP_000453317.1|2077506_2078340_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.6	3.5e-158
WP_000623471.1|2080437_2080791_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
WP_001200542.1|2080787_2081153_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000091445.1|2081408_2081711_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096494.1|2081970_2082684_+	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_001168904.1|2083123_2083759_-|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001030469.1|2084054_2084498_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001153745.1|2084484_2084928_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000671057.1|2085040_2085511_-	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_000384171.1|2085709_2085934_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032833.1|2086209_2087064_+	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000163236.1|2087358_2087754_-	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	99.2	3.1e-72
WP_000989121.1|2087771_2089064_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_000221179.1|2089063_2089378_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
WP_001261679.1|2089900_2091403_+	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
WP_167775034.1|2091895_2092927_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.1	6.2e-197
WP_000493886.1|2092933_2093566_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.0	6.4e-112
WP_167775006.1|2093576_2094758_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.2	6.2e-225
WP_001008551.1|2094770_2095235_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001196360.1|2095356_2096358_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.1	7.7e-184
WP_001790712.1|2096469_2096589_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000266096.1|2096591_2097419_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000757543.1|2097990_2098392_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000764419.1|2098511_2099075_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000526539.1|2099071_2100025_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_001025061.1|2100134_2101316_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
WP_167775007.1|2101606_2104021_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.3	0.0e+00
WP_000836465.1|2104042_2104354_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
WP_001641584.1|2104679_2111240_+	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	97.1	1.3e-300
>prophage 8
NZ_CP050690	Staphylococcus aureus strain PMB179-1 chromosome, complete genome	2741492	2312592	2320922	2741492	tRNA	Caulobacter_phage(16.67%)	7	NA	NA
WP_001217252.1|2312592_2314410_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	3.6e-54
WP_001283055.1|2314633_2315740_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_000624583.1|2315870_2316548_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_000683933.1|2316550_2317651_+	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_001062183.1|2317764_2319111_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	1.8e-55
WP_000924220.1|2319120_2320011_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	36.0	3.4e-26
WP_167775011.1|2320136_2320922_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	4.7e-19
>prophage 9
NZ_CP050690	Staphylococcus aureus strain PMB179-1 chromosome, complete genome	2741492	2380448	2415101	2741492	protease,integrase,portal,tail,head,terminase	Staphylococcus_phage(78.95%)	58	2381209:2381226	2428203:2428220
WP_000987769.1|2380448_2382200_+	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	33.6	1.7e-21
2381209:2381226	attL	CTAAAAATATTAGAGACA	NA	NA	NA	NA
WP_001641538.1|2382444_2383353_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_011053028.1|2383504_2385391_+	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	96.2	1.0e-112
WP_000264751.1|2385433_2386639_-|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
WP_000337826.1|2386764_2386944_+	hypothetical protein	NA	A0EWN7	Staphylococcus_virus	100.0	8.3e-25
WP_000392186.1|2386923_2387856_-	hypothetical protein	NA	A0EWN8	Staphylococcus_virus	100.0	3.9e-174
WP_000661437.1|2387887_2388613_-	hypothetical protein	NA	A0A0F6N4L7	Staphylococcus_phage	100.0	9.9e-125
WP_000775187.1|2388640_2389315_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0F6N3H6	Staphylococcus_phage	100.0	4.9e-126
WP_001055143.1|2389331_2389664_-	helix-turn-helix transcriptional regulator	NA	R4IH08	Staphylococcus_phage	100.0	4.1e-57
WP_000108122.1|2389926_2390121_+	helix-turn-helix transcriptional regulator	NA	A0A0F6N3M9	Staphylococcus_phage	100.0	1.1e-25
WP_001002757.1|2390120_2390888_+	phage antirepressor Ant	NA	A0A0F6N3N8	Staphylococcus_phage	100.0	1.1e-142
WP_000187184.1|2390888_2391113_+	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	100.0	3.2e-34
WP_001094943.1|2391152_2391602_+	hypothetical protein	NA	A1KWZ2	Staphylococcus_virus	100.0	3.0e-79
WP_000977381.1|2391615_2391837_+	hypothetical protein	NA	A0A0F6N3I2	Staphylococcus_phage	100.0	1.5e-31
WP_000066011.1|2391829_2391991_+	DUF1270 domain-containing protein	NA	Q4ZAZ7	Staphylococcus_virus	100.0	2.5e-20
WP_000165363.1|2392083_2392386_+	DUF2482 family protein	NA	A0A0F6N3N3	Staphylococcus_phage	100.0	1.4e-48
WP_000291067.1|2392390_2392651_+	DUF1108 family protein	NA	A1KX65	Staphylococcus_virus	100.0	8.9e-44
WP_001004336.1|2392663_2393200_+	hypothetical protein	NA	A0A0F6N4M6	Staphylococcus_phage	100.0	1.4e-80
WP_000840496.1|2393200_2393851_+	single-stranded DNA-binding protein	NA	A0A0F6N3I5	Staphylococcus_phage	100.0	1.1e-119
WP_001099006.1|2393847_2394291_+	single-stranded DNA-binding protein	NA	Q9B0G2	Staphylococcus_virus	100.0	1.4e-73
WP_000057261.1|2394302_2394977_+	hypothetical protein	NA	Q9B0G1	Staphylococcus_virus	100.0	3.0e-131
WP_001622139.1|2394973_2395123_+	hypothetical protein	NA	A7TWN0	Staphylococcus_phage	98.0	5.3e-17
WP_000414755.1|2395115_2395397_-	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_000190253.1|2395462_2396233_+	hypothetical protein	NA	A0A1W6JQ00	Staphylococcus_phage	100.0	6.4e-122
WP_000803062.1|2396242_2397022_+	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	100.0	3.8e-146
WP_000256589.1|2397015_2397174_+	hypothetical protein	NA	A0A2H4PQI7	Staphylococcus_phage	100.0	4.5e-22
WP_107285557.1|2397186_2397408_+	DUF3269 family protein	NA	Q9G021	Staphylococcus_phage	98.6	4.9e-35
WP_000401953.1|2397417_2397825_+	RusA family crossover junction endodeoxyribonuclease	NA	A9CR74	Staphylococcus_phage	100.0	1.0e-73
WP_042903520.1|2397824_2398010_+	DUF3113 family protein	NA	A0A0N9BBI1	Staphylococcus_phage	98.4	5.4e-27
WP_000029367.1|2398010_2398367_+	hypothetical protein	NA	A0A2I6PDX2	Staphylococcus_phage	100.0	1.1e-60
WP_000132194.1|2398370_2398613_+	hypothetical protein	NA	A0A2I6PEV3	Staphylococcus_phage	100.0	1.5e-40
WP_031865245.1|2398627_2398882_+	DUF1024 family protein	NA	A0A2I6PE79	Staphylococcus_phage	100.0	5.0e-39
WP_072324140.1|2398844_2399039_+	hypothetical protein	NA	A0A2I6PEB2	Staphylococcus_phage	100.0	2.4e-25
WP_031865247.1|2399031_2399559_+	dUTP pyrophosphatase	NA	A0A2I6PE85	Staphylococcus_phage	100.0	7.8e-95
WP_001209217.1|2399595_2399769_+	hypothetical protein	NA	A0A2I6PEA8	Staphylococcus_phage	100.0	3.6e-25
WP_033856914.1|2399785_2400073_+	DUF1381 domain-containing protein	NA	Q4ZBK2	Staphylococcus_phage	94.7	2.6e-44
WP_000608281.1|2400065_2400302_+	hypothetical protein	NA	A7TWI0	Staphylococcus_phage	98.7	1.4e-35
WP_016187443.1|2400285_2400681_+	hypothetical protein	NA	M9QX07	Staphylococcus_phage	100.0	2.6e-66
WP_031764091.1|2400677_2400830_+	transcriptional regulator	NA	A0A2I6PE89	Staphylococcus_phage	100.0	2.6e-19
WP_031910532.1|2400897_2401098_+	DUF1514 family protein	NA	A0A2I6PE96	Staphylococcus_phage	100.0	2.9e-26
WP_031809042.1|2401149_2403597_+	phage-like protein	NA	Q4ZCG0	Staphylococcus_virus	99.3	0.0e+00
WP_072324141.1|2403699_2403804_-	hypothetical protein	NA	Q4ZCF8	Staphylococcus_virus	97.1	2.1e-12
WP_001794602.1|2403937_2404228_+	VRR-NUC domain-containing protein	NA	M1T308	Staphylococcus_phage	100.0	4.9e-51
WP_072324142.1|2404208_2405576_+	DEAD/DEAH box helicase	NA	Q4ZCM9	Staphylococcus_virus	99.6	1.7e-263
WP_000528512.1|2405588_2406026_+	transcriptional regulator	NA	A0A2I6PEN3	Staphylococcus_phage	100.0	7.9e-77
WP_000160694.1|2406182_2406497_+	HNH endonuclease	NA	M9QQL5	Staphylococcus_phage	100.0	2.5e-56
WP_000778932.1|2406624_2406930_+|terminase	terminase	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
WP_167775015.1|2406919_2408611_+|terminase	terminase large subunit	terminase	A0A2I6PE44	Staphylococcus_phage	99.8	0.0e+00
WP_167775016.1|2408615_2409854_+|portal	phage portal protein	portal	A0A2K9VBP0	Staphylococcus_phage	99.8	2.0e-234
WP_167775017.1|2409837_2410611_+|protease	Clp protease ClpP	protease	A0A2I6PEQ7	Staphylococcus_phage	99.6	1.2e-136
WP_000050973.1|2411853_2412132_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
WP_000395501.1|2412143_2412476_+	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
WP_000110020.1|2412472_2412874_+	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_001023806.1|2412874_2413270_+	DUF3168 domain-containing protein	NA	A0A2I6PEQ4	Staphylococcus_phage	100.0	8.8e-67
WP_001670555.1|2413304_2413946_+|tail	phi13 family phage major tail protein	tail	Q9B0D5	Staphylococcus_virus	100.0	5.9e-121
WP_000169131.1|2414037_2414493_+	Ig domain-containing protein	NA	Q9B0D4	Staphylococcus_phage	100.0	2.8e-77
WP_000589167.1|2414550_2414901_+	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
WP_000438833.1|2414942_2415101_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
2428203:2428220	attR	CTAAAAATATTAGAGACA	NA	NA	NA	NA
>prophage 10
NZ_CP050690	Staphylococcus aureus strain PMB179-1 chromosome, complete genome	2741492	2421313	2431144	2741492	plate,tail,holin	Staphylococcus_phage(90.91%)	11	NA	NA
WP_001190533.1|2421313_2422138_+|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
WP_000384474.1|2422146_2423730_+	peptidase	NA	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
WP_000179858.1|2423729_2424020_+	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
WP_000429558.1|2424035_2425946_+	minor structural protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
WP_000067127.1|2425945_2427412_+|plate	BppU family phage baseplate upper protein	plate	A0A2I6PES7	Staphylococcus_phage	100.0	1.5e-273
WP_001166599.1|2427411_2427801_+	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000916020.1|2427793_2427958_+	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_000466784.1|2428003_2428303_+	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_000339146.1|2428438_2428741_+|holin	phage holin	holin	A0A2I6PET6	Staphylococcus_phage	100.0	7.0e-48
WP_000909213.1|2428751_2430206_+	CHAP domain-containing protein	NA	U5U7D2	Staphylococcus_phage	100.0	2.6e-289
WP_000126130.1|2430928_2431144_+	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	2.0e-25
