The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP049053	Streptococcus thermophilus strain ST64987 chromosome, complete genome	1831074	587265	597220	1831074		Streptococcus_phage(85.71%)	9	NA	NA
WP_004197422.1|587265_588267_+	catabolite control protein A	NA	C6ZCU4	Enterobacteria_phage	27.3	3.7e-21
WP_014621359.1|588326_588494_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014621361.1|588629_589394_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011680937.1|589406_590522_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	99.6	5.2e-157
WP_011680938.1|590568_591024_-	YueI family protein	NA	W6LLD2	Streptococcus_phage	98.0	2.2e-77
WP_011680939.1|591232_592537_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	99.5	1.4e-246
WP_002947233.1|593034_595221_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	99.2	0.0e+00
WP_024009810.1|595382_596546_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	99.2	1.7e-219
WP_002947238.1|596542_597220_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	100.0	1.9e-122
>prophage 2
NZ_CP049053	Streptococcus thermophilus strain ST64987 chromosome, complete genome	1831074	713689	780231	1831074	transposase,bacteriocin,protease,tRNA	Streptococcus_phage(31.03%)	55	NA	NA
WP_002948672.1|713689_714946_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	56.4	1.4e-126
WP_014621434.1|716599_719236_-	calcium-translocating P-type ATPase, PMCA-type	NA	M1HK51	Paramecium_bursaria_Chlorella_virus	29.2	2.8e-84
WP_167401475.1|719412_721131_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	36.2	2.1e-27
WP_023909568.1|721277_721613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002950451.1|721940_724190_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_002950455.1|724377_725253_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
WP_011681046.1|725391_727110_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	83.2	2.2e-271
WP_011681047.1|727192_727765_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_014608202.1|727792_728338_-	phosphopantothenoylcysteine decarboxylase	NA	A0A1V0S7W6	Shearwaterpox_virus	35.6	4.4e-24
WP_002948206.1|728330_729014_-	phosphopantothenate--cysteine ligase	NA	NA	NA	NA	NA
WP_167401476.1|729207_730878_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
WP_113870373.1|731064_731739_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_014621440.1|731728_732028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014621441.1|732105_732429_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014621442.1|732451_732613_+	histidine kinase	NA	NA	NA	NA	NA
WP_014621443.1|732632_733148_+	sensor histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	29.8	1.1e-05
WP_167401477.1|733248_734818_+|transposase	IS3 family transposase	transposase	A0A0C5AC89	Paenibacillus_phage	50.4	8.4e-52
WP_167401478.1|735009_736221_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	73.2	3.0e-166
WP_011681050.1|736579_737650_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011681051.1|737767_739306_+	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA	NA
WP_064356012.1|740130_744891_+	S8 family serine peptidase	NA	A0A217EQY2	Bacillus_phage	27.7	4.2e-06
WP_113870372.1|745016_746595_+|transposase	IS3 family transposase	transposase	A0A0C5AC89	Paenibacillus_phage	50.4	1.1e-51
WP_113870497.1|746720_748025_+|transposase	ISL3-like element ISSth1 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	70.8	3.8e-167
WP_002947597.1|748124_748361_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_014727542.1|748429_749350_-	type I pantothenate kinase	NA	A0A1B1ISL9	uncultured_Mediterranean_phage	36.6	4.9e-36
WP_002950490.1|749674_750265_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_002950494.1|751610_751823_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_002947578.1|751834_752230_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_002950496.1|752216_752615_+	cytidine deaminase	NA	NA	NA	NA	NA
WP_002950498.1|752677_753748_+	BMP family ABC transporter substrate-binding protein	NA	A0A0A7DN02	Lactobacillus_phage	38.1	6.7e-53
WP_002950502.1|753861_755400_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.4	1.5e-16
WP_002950506.1|755392_756460_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011681056.1|756461_757418_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011681057.1|757521_758157_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	60.5	4.5e-73
WP_167401479.1|758251_760738_+	bifunctional DnaQ family exonuclease/ATP-dependent helicase	NA	A0A1X9I5C8	Streptococcus_phage	47.6	2.5e-212
WP_011681058.1|760882_761365_+	DUF5590 domain-containg protein	NA	NA	NA	NA	NA
WP_004197254.1|761369_762551_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_167401480.1|762587_763934_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	31.2	7.4e-57
WP_167401481.1|763958_764366_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002950526.1|765447_765828_+	RidA family protein	NA	NA	NA	NA	NA
WP_014608212.1|766002_766656_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	56.8	3.3e-63
WP_014608213.1|766655_767099_+	6-carboxytetrahydropterin synthase QueD	NA	J9PV91	Bacillus_phage	56.3	3.5e-40
WP_023909581.1|767091_767808_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	47.3	2.4e-62
WP_002946191.1|767927_768419_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	56.7	1.4e-45
WP_014621465.1|769238_769427_+|protease	serine protease	protease	NA	NA	NA	NA
WP_014621466.1|769631_770402_+	DUF1003 domain-containing protein	NA	NA	NA	NA	NA
WP_011225838.1|770382_771273_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	28.9	3.3e-05
WP_014621467.1|771269_772244_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	73.8	4.0e-137
WP_002945081.1|772240_773152_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	64.7	7.1e-104
WP_080998416.1|774113_774332_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002944716.1|774462_774663_+	cold shock domain-containing protein	NA	A0A1X9IGI9	Lactococcus_phage	53.1	1.1e-12
WP_011681063.1|774942_775143_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	89.4	2.9e-26
WP_113870370.1|775473_776649_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	28.9	3.1e-35
WP_113870369.1|776774_778865_-	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	32.9	1.4e-65
WP_167401482.1|779055_780231_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	28.0	1.2e-34
>prophage 3
NZ_CP049053	Streptococcus thermophilus strain ST64987 chromosome, complete genome	1831074	1466831	1518268	1831074	tRNA,protease,bacteriocin	Bacillus_virus(27.27%)	58	NA	NA
WP_002946582.1|1466831_1468274_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_100273457.1|1468273_1469740_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_002884769.1|1469739_1470042_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_024010053.1|1470181_1470436_-	glycosyl transferase	NA	NA	NA	NA	NA
WP_080998437.1|1470448_1470658_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_167401625.1|1470973_1472386_-	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
WP_024703984.1|1472567_1473077_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_014608646.1|1473088_1473937_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002946999.1|1474060_1474612_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	40.3	2.6e-24
WP_002951720.1|1474674_1475460_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_002951721.1|1475719_1476934_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002946987.1|1477288_1477741_+	universal stress protein	NA	NA	NA	NA	NA
WP_167401590.1|1478563_1478737_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681547.1|1478797_1479172_-	membrane protein	NA	NA	NA	NA	NA
WP_002946980.1|1479383_1480184_-	pyruvate formate lyase-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	31.8	2.9e-24
WP_157821721.1|1480371_1480500_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_002951727.1|1481179_1482511_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_011226459.1|1482621_1483404_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	5.9e-14
WP_064355828.1|1484025_1486092_-	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_084830769.1|1486100_1486343_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011226462.1|1486339_1486888_-	SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	44.1	3.5e-37
WP_011226463.1|1486884_1487829_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	48.3	8.6e-36
WP_014608650.1|1487913_1488951_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_014621910.1|1488967_1489465_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	28.8	1.4e-13
WP_011226466.1|1489498_1490047_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_082309113.1|1490188_1491109_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.6	8.0e-87
WP_082309114.1|1491174_1491399_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_011681551.1|1491613_1492357_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.5	4.3e-30
WP_014621913.1|1492356_1493280_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014608653.1|1493498_1494329_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002947030.1|1494788_1495022_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681554.1|1495339_1496443_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_011681555.1|1499298_1500081_+	carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_014608655.1|1500131_1500584_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014621914.1|1500934_1501240_-	type I restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_011681558.1|1502217_1502973_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_011681559.1|1502969_1503620_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	31.5	1.1e-21
WP_011681560.1|1504778_1505534_-	peptidase	NA	NA	NA	NA	NA
WP_014608659.1|1505815_1506178_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002951781.1|1506264_1507128_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	34.4	3.9e-27
WP_113870483.1|1507248_1509516_+	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA	NA
WP_002951783.1|1509595_1509976_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002945924.1|1510100_1510364_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004197070.1|1510685_1510982_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_011681562.1|1511146_1511353_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681563.1|1511383_1512073_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_011681564.1|1512259_1512439_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003094909.1|1512467_1512860_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681565.1|1512871_1513111_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_011226490.1|1513361_1513763_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681567.1|1514356_1514572_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681568.1|1514617_1514779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011226494.1|1514785_1515016_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_011681569.1|1515371_1515572_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681570.1|1515590_1515767_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_011681571.1|1516017_1516755_+	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	21.3	5.4e-09
WP_011681572.1|1516748_1518089_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_011226496.1|1518106_1518268_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
>prophage 4
NZ_CP049053	Streptococcus thermophilus strain ST64987 chromosome, complete genome	1831074	1641134	1680321	1831074	tRNA,protease,transposase,bacteriocin	Streptococcus_phage(30.0%)	39	NA	NA
WP_084829118.1|1641134_1642277_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	43.4	2.7e-84
WP_109195039.1|1642530_1643001_-|transposase	IS200/IS605 family transposase	transposase	G9CU69	Helicobacter_phage	29.5	2.0e-09
WP_014621725.1|1643223_1644528_+|transposase	ISL3-like element ISSth1 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	71.0	1.3e-167
WP_002953513.1|1644605_1644740_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_011681661.1|1645625_1646675_-	protein jag	NA	NA	NA	NA	NA
WP_002953525.1|1646686_1647493_-	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_011681662.1|1647607_1647943_-	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_014608717.1|1648027_1649413_-	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_002953531.1|1649741_1650941_-	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_002953532.1|1651843_1653298_-|tRNA	glutamate--tRNA ligase	tRNA	A0A2K9L481	Tupanvirus	30.3	6.9e-08
WP_002946412.1|1654649_1655339_-	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_167401601.1|1655438_1655864_-	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_002953536.1|1656035_1656389_+	DUF3397 domain-containing protein	NA	NA	NA	NA	NA
WP_002947059.1|1656480_1656978_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_080998440.1|1657905_1659267_-	DNA repair protein RadA	NA	NA	NA	NA	NA
WP_002947069.1|1659444_1659891_-	dUTP diphosphatase	NA	Q332E8	Clostridium_botulinum_C_phage	50.7	8.5e-34
WP_014621986.1|1660725_1661082_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	56.8	4.4e-33
WP_014621987.1|1661148_1661874_+	DUF438 domain-containing protein	NA	NA	NA	NA	NA
WP_011681667.1|1662893_1663349_+	membrane protein	NA	NA	NA	NA	NA
WP_011681668.1|1663581_1664604_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_002953557.1|1664622_1665537_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	52.2	4.1e-75
WP_167401602.1|1665599_1667170_-|transposase	IS3 family transposase	transposase	A0A0C5AC89	Paenibacillus_phage	50.4	1.7e-52
WP_014621994.1|1667269_1667944_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_014621995.1|1667934_1668462_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_011681671.1|1668530_1669664_-	N-acetyldiaminopimelate deacetylase	NA	NA	NA	NA	NA
WP_002951996.1|1669742_1670441_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA	NA
WP_014608733.1|1671395_1672229_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_014621998.1|1672597_1672765_+|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_014621999.1|1672817_1673081_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014608735.1|1673161_1673680_-	nucleoside deaminase	NA	NA	NA	NA	NA
WP_011226610.1|1674438_1674831_-	single-stranded DNA-binding protein	NA	A1EAD1	Streptococcus_phage	49.2	8.8e-27
WP_011226611.1|1675036_1675264_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_014622000.1|1675278_1676310_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_002952017.1|1676447_1677071_-|tRNA	DUF4479 and tRNA-binding domain-containing protein	tRNA	NA	NA	NA	NA
WP_011226613.1|1677080_1677395_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_011681678.1|1677391_1677676_-	DUF4651 domain-containing protein	NA	NA	NA	NA	NA
WP_002952022.1|1677775_1678843_+	glutamyl aminopeptidase	NA	NA	NA	NA	NA
WP_011226616.1|1678858_1679629_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	36.1	2.8e-32
WP_011681679.1|1679658_1680321_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 5
NZ_CP049053	Streptococcus thermophilus strain ST64987 chromosome, complete genome	1831074	1808608	1816784	1831074		Staphylococcus_phage(16.67%)	9	NA	NA
WP_011681757.1|1808608_1809238_-	hypothetical protein	NA	Q4Z8Z7	Staphylococcus_phage	45.2	3.6e-22
WP_011226701.1|1809477_1810032_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0E3XCL7	Enterococcus_phage	42.2	3.1e-25
WP_002952279.1|1810335_1811130_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_002947774.1|1811122_1811965_-	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.2	2.1e-17
WP_101415716.1|1811940_1812771_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	31.3	7.6e-20
WP_024704275.1|1812783_1813326_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_167401608.1|1813338_1814196_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024704276.1|1814254_1815532_-	insulinase family protein	NA	A0A167R9K4	Powai_lake_megavirus	28.1	1.3e-21
WP_024704277.1|1815533_1816784_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	39.9	5.0e-92
