The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046171	Nocardia brasiliensis strain AUSMDU00024985 chromosome, complete genome	7949490	59981	80016	7949490	protease	Gordonia_phage(78.57%)	26	NA	NA
WP_167460139.1|59981_61523_+	hypothetical protein	NA	A0A142KC08	Gordonia_phage	46.0	7.8e-103
WP_167460140.1|62870_64268_+|protease	Clp protease ClpP	protease	A0A2K9VH82	Gordonia_phage	47.3	9.0e-90
WP_167460141.1|64270_64648_+	DUF2190 family protein	NA	A0A142K9Z3	Gordonia_phage	69.9	9.0e-37
WP_167460142.1|64662_65571_+	hypothetical protein	NA	A0A142K9Z4	Gordonia_phage	74.9	2.1e-124
WP_167460143.1|65560_65980_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167460144.1|65983_66385_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167460145.1|66381_66687_+	hypothetical protein	NA	A0A2H4P9W7	Gordonia_phage	46.4	4.0e-19
WP_167466070.1|66701_66950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167460146.1|66946_67354_+	hypothetical protein	NA	A0A2H4PA61	Gordonia_phage	42.4	2.8e-15
WP_167460147.1|67427_68243_+	hypothetical protein	NA	A0A142KC18	Gordonia_phage	37.4	1.2e-25
WP_167460148.1|68329_68698_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167460149.1|68694_69051_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167460150.1|69185_69479_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167460151.1|69508_70030_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167460152.1|69986_72743_+	hypothetical protein	NA	A0A2H4P9V9	Gordonia_phage	49.0	1.3e-103
WP_167460153.1|72751_73729_+	hypothetical protein	NA	A0A2H4PF89	Gordonia_phage	32.1	7.3e-30
WP_167460154.1|73730_75419_+	hypothetical protein	NA	G1BSP2	Mycobacterium_virus	48.9	1.2e-149
WP_167460155.1|75454_75706_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167460156.1|75846_76404_+	DUF2744 domain-containing protein	NA	NA	NA	NA	NA
WP_167460157.1|76400_76988_+	C39 family peptidase	NA	A0A1B3AYA2	Gordonia_phage	47.3	1.0e-34
WP_167460158.1|76984_77857_+	hypothetical protein	NA	D4P815	Rhodococcus_phage	46.6	2.1e-44
WP_167460159.1|77925_78120_+	hypothetical protein	NA	A0A2P1JT10	Streptomyces_phage	50.0	8.0e-05
WP_167460160.1|78126_78498_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167460161.1|78499_79327_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167460162.1|79338_79647_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167460163.1|79674_80016_+	hypothetical protein	NA	G8EJZ4	Gordonia_phage	41.4	8.2e-13
>prophage 2
NZ_CP046171	Nocardia brasiliensis strain AUSMDU00024985 chromosome, complete genome	7949490	4472694	4491458	7949490	transposase	Staphylococcus_phage(100.0%)	17	NA	NA
WP_167463432.1|4472694_4473045_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_167463433.1|4473095_4473788_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_167463434.1|4473702_4475079_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	32.7	3.5e-30
WP_167463435.1|4475136_4475658_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167463436.1|4476544_4476922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167463437.1|4477874_4478153_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_167463438.1|4478277_4478865_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_167463439.1|4479075_4480182_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
WP_167463440.1|4480183_4482313_-	MMPL family transporter	NA	NA	NA	NA	NA
WP_167463441.1|4482435_4483056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167463442.1|4483512_4483950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167463443.1|4484840_4485533_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_167463444.1|4485870_4486251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167466589.1|4486670_4486994_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_167463445.1|4487629_4488649_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_167466590.1|4488642_4490484_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_167463446.1|4490705_4491458_-|transposase	TnsA-like heteromeric transposase endonuclease subunit	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP046171	Nocardia brasiliensis strain AUSMDU00024985 chromosome, complete genome	7949490	6498852	6543074	7949490	portal,tail,capsid,transposase,integrase	Mycobacterium_phage(54.76%)	57	6496489:6496505	6501428:6501444
6496489:6496505	attL	TCGAGGTCTTCGGCGAA	NA	NA	NA	NA
WP_167464944.1|6498852_6500109_-|integrase	tyrosine-type recombinase/integrase	integrase	E9LUK6	Lactobacillus_phage	41.8	5.6e-06
WP_167466842.1|6500131_6500317_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_167464945.1|6500564_6500996_+	DUF2637 domain-containing protein	NA	A0A0K1LIW8	Mycobacterium_phage	50.4	6.5e-23
WP_167464946.1|6501210_6502473_-	hypothetical protein	NA	A0A292GBV9	Xanthomonas_phage	47.3	9.2e-110
6501428:6501444	attR	TCGAGGTCTTCGGCGAA	NA	NA	NA	NA
WP_167464947.1|6502476_6503391_-	AAA family ATPase	NA	A0A2L1IW05	Streptomyces_phage	42.0	8.0e-55
WP_167464948.1|6503413_6504145_-	PE-PPE domain-containing protein	NA	A0A2L1IVF4	Gordonia_phage	33.7	6.1e-13
WP_167464949.1|6504293_6504629_-	hypothetical protein	NA	A0A0A7RV08	Mycobacterium_phage	40.0	1.3e-15
WP_167464950.1|6504824_6506636_-	DNA polymerase	NA	A0A0K1LIQ6	Mycobacterium_phage	57.4	3.0e-194
WP_167464951.1|6506632_6506869_-	Lrp/AsnC family transcriptional regulator	NA	A0A1D8ET32	Mycobacterium_phage	44.1	4.4e-05
WP_167466843.1|6506940_6507342_-	hypothetical protein	NA	A0A2P1CHT0	Mycobacterium_phage	45.4	3.7e-20
WP_167464952.1|6507395_6507557_-	hypothetical protein	NA	G1D147	Mycobacterium_phage	54.2	7.5e-09
WP_167464953.1|6507553_6508042_-	hypothetical protein	NA	A0A1D8ET39	Mycobacterium_phage	28.1	1.5e-07
WP_167464954.1|6508118_6508886_-	hypothetical protein	NA	A0A222YZN7	Mycobacterium_phage	66.7	2.3e-103
WP_167460077.1|6508882_6509323_-	hypothetical protein	NA	A0A222ZJF9	Rhodococcus_phage	61.8	1.5e-27
WP_167464955.1|6509453_6509687_-	glutaredoxin family protein	NA	V5R9U9	Mycobacterium_phage	49.1	1.0e-06
WP_167464956.1|6509694_6510366_-	topoisomerase	NA	A0A1I9S7W3	Rhodococcus_phage	59.4	8.8e-67
WP_167464957.1|6510582_6510954_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167466845.1|6510929_6511400_-	hypothetical protein	NA	A0A1L5C0W0	Mycobacterium_phage	64.0	3.5e-46
WP_167466844.1|6511383_6512202_-	AAA family ATPase	NA	A0A088FWM7	Mycobacterium_phage	68.1	2.9e-96
WP_167464958.1|6512247_6513027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167464959.1|6513023_6513869_-	PD-(D/E)XK nuclease family protein	NA	A0A222ZIS2	Rhodococcus_phage	60.2	2.0e-92
WP_167464960.1|6513887_6514133_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167466846.1|6514179_6514683_-	XRE family transcriptional regulator	NA	U5P4E6	Mycobacterium_phage	50.3	9.9e-39
WP_167464961.1|6515544_6515820_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167464962.1|6515889_6516189_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167464963.1|6516200_6517286_-	DUF932 domain-containing protein	NA	G9FHC5	Rhodococcus_phage	44.8	4.0e-77
WP_167464964.1|6517383_6517626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167464965.1|6517622_6517922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167464966.1|6518260_6518611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167464967.1|6519777_6520173_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167464968.1|6520199_6520439_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167464969.1|6520482_6520686_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167464970.1|6521401_6521713_+	HNH endonuclease	NA	G1DA51	Mycobacterium_virus	56.4	2.0e-21
WP_167464971.1|6521747_6522170_+	hypothetical protein	NA	G9FHQ7	Rhodococcus_virus	58.7	2.3e-41
WP_167464972.1|6522702_6523470_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0K0N6L3	Gordonia_phage	71.6	5.9e-75
WP_167464973.1|6523466_6523874_+	hypothetical protein	NA	G9FHA4	Rhodococcus_phage	35.0	1.2e-10
WP_167464974.1|6523883_6524318_+	hypothetical protein	NA	A0A1V0EEK8	Caulobacter_phage	40.9	1.3e-18
WP_167464975.1|6524321_6524966_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167464976.1|6525035_6526223_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_167464977.1|6526230_6527907_+	hypothetical protein	NA	A0A0K1LIM6	Mycobacterium_phage	73.4	5.3e-254
WP_167466847.1|6527903_6529304_+|portal	phage portal protein	portal	A0A0K2CXQ4	Mycobacterium_phage	51.8	3.6e-123
WP_167464978.1|6529300_6530200_+	hypothetical protein	NA	G9FHJ6	Rhodococcus_virus	39.4	8.7e-46
WP_167464979.1|6530256_6530760_+	hypothetical protein	NA	A0A0B5A3L4	Mycobacterium_phage	31.3	4.0e-08
WP_167464980.1|6530775_6531777_+|capsid	phage major capsid protein	capsid	G1D366	Mycobacterium_virus	66.2	7.1e-121
WP_167464981.1|6531920_6532331_+	hypothetical protein	NA	A0A1L6BZ58	Mycobacterium_phage	51.9	2.7e-26
WP_167464982.1|6532327_6532687_+	hypothetical protein	NA	R9R4C0	Mycobacterium_phage	63.6	4.6e-38
WP_167466848.1|6532698_6533016_+	DUF5403 family protein	NA	A0A222Z048	Mycobacterium_phage	50.0	3.7e-15
WP_167464983.1|6533012_6533432_+	hypothetical protein	NA	A0A220NRT6	Mycobacterium_phage	73.1	1.8e-49
WP_167464984.1|6533445_6534333_+|tail	phage tail protein	tail	A0A222Z9Y5	Rhodococcus_phage	45.6	6.2e-60
WP_167464985.1|6534426_6534786_+|tail	phage tail assembly protein	tail	A0A291AUX6	Mycobacterium_phage	50.0	6.4e-24
WP_167464986.1|6534737_6535166_+	D site-binding protein	NA	A0A1J0MIX5	Mycobacterium_phage	40.9	7.6e-24
WP_167464221.1|6535183_6536401_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_167464987.1|6536622_6539910_+	hypothetical protein	NA	G1DB44	Mycobacterium_phage	33.3	1.7e-46
WP_167466849.1|6539913_6540825_+	hypothetical protein	NA	A0A1B3B0W7	Gordonia_phage	47.9	3.4e-82
WP_167464988.1|6540809_6542465_+|tail	phage tail protein	tail	A0A220NQB2	Rhodococcus_phage	55.0	3.1e-182
WP_167464989.1|6542461_6542863_+	DUF2744 domain-containing protein	NA	D2XRM4	Mycobacterium_phage	41.3	2.1e-23
WP_167464990.1|6542870_6543074_+	hypothetical protein	NA	D4P732	Rhodococcus_phage	63.2	4.6e-11
>prophage 4
NZ_CP046171	Nocardia brasiliensis strain AUSMDU00024985 chromosome, complete genome	7949490	7566368	7594021	7949490	portal,capsid,holin,terminase,tail	Mycobacterium_phage(69.23%)	30	NA	NA
WP_167465763.1|7566368_7566599_-	hypothetical protein	NA	D4P732	Rhodococcus_phage	57.7	1.5e-05
WP_167465764.1|7566595_7567858_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A223FZJ1	Rhodococcus_phage	56.7	2.2e-55
WP_167465765.1|7567854_7568259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167465766.1|7568255_7569164_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167465767.1|7569163_7570012_-	hypothetical protein	NA	A0A088F7Q2	Mycobacterium_phage	32.2	8.6e-19
WP_167466969.1|7570033_7571518_-	hypothetical protein	NA	A0A2D2W365	Mycobacterium_phage	50.6	1.5e-148
WP_167465768.1|7571664_7572459_-	hypothetical protein	NA	G1D0M3	Mycobacterium_virus	21.6	6.0e-22
WP_167465769.1|7572587_7578203_-|tail	phage tail tape measure protein	tail	A0A0K1Y5T7	Streptomyces_phage	28.6	6.7e-27
WP_167465770.1|7578215_7578716_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167465771.1|7578667_7579141_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167465772.1|7579233_7580199_-	hypothetical protein	NA	R4TQZ2	Mycobacterium_phage	44.9	2.3e-60
WP_167465773.1|7580209_7580596_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167465774.1|7580602_7580968_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167465775.1|7580972_7581320_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167465776.1|7581316_7581844_-	hypothetical protein	NA	A0A2P0ZZM2	Mycobacterium_phage	36.0	3.2e-24
WP_167465777.1|7581852_7582044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167465778.1|7582056_7583481_-|capsid	phage major capsid protein	capsid	A0A2D2W352	Mycobacterium_phage	44.7	3.0e-101
WP_167465779.1|7583510_7584326_-	hypothetical protein	NA	S5Z9F7	Mycobacterium_phage	57.3	2.2e-35
WP_167465780.1|7584702_7586169_-|portal	phage portal protein	portal	A0A2L1IYC4	Mycobacterium_phage	46.3	4.6e-121
WP_167465781.1|7586168_7586411_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167466970.1|7586422_7588114_-|terminase	terminase large subunit	terminase	G1D5M3	Mycobacterium_phage	61.4	3.3e-195
WP_167465782.1|7588120_7588369_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167465783.1|7588377_7588761_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167465784.1|7588727_7589102_-|terminase	P27 family phage terminase small subunit	terminase	NA	NA	NA	NA
WP_167465785.1|7589436_7590441_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167465786.1|7590445_7590973_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167465787.1|7591103_7591772_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167465788.1|7592520_7592742_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167465789.1|7592720_7593071_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167460079.1|7593730_7594021_-|holin	holin	holin	A0A2P1JVL8	Mycobacterium_phage	53.4	2.5e-18
>prophage 5
NZ_CP046171	Nocardia brasiliensis strain AUSMDU00024985 chromosome, complete genome	7949490	7605054	7613298	7949490		Rhodococcus_phage(37.5%)	12	NA	NA
WP_167465807.1|7605054_7607316_-	bifunctional DNA primase/polymerase	NA	G8I402	Mycobacterium_virus	40.1	9.3e-129
WP_167465808.1|7607312_7607762_-	HNH endonuclease	NA	A0A076YKQ7	Mycobacterium_phage	45.8	4.7e-24
WP_167465809.1|7607879_7608068_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167465810.1|7608095_7609241_-	DNA polymerase III subunit beta	NA	A0A0A7HEW5	Arthrobacter_phage	27.0	3.4e-10
WP_167465811.1|7609207_7610086_-	phosphoadenosine phosphosulfate reductase family protein	NA	D4P7X7	Rhodococcus_phage	60.1	8.4e-94
WP_167460080.1|7610158_7610851_-	hypothetical protein	NA	A0A0M5M7K2	Mycobacterium_phage	42.4	3.1e-19
WP_167465812.1|7610915_7611080_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167465813.1|7611079_7611847_-	hypothetical protein	NA	G8IR53	Mycobacterium_virus	38.0	3.1e-44
WP_167465814.1|7611843_7612338_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167465815.1|7612334_7612472_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167465816.1|7612468_7612873_-	hypothetical protein	NA	A0A1I9SA02	Rhodococcus_phage	35.4	1.2e-05
WP_167465817.1|7612872_7613298_-	hypothetical protein	NA	A0A1I9SA02	Rhodococcus_phage	32.5	1.1e-06
