assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011765565.1_ASM1176556v1	NZ_CP050266	Salinivibrio costicola strain M318 chromosome 1, complete sequence	1	732019-732222	1	PILER-CR	no	DEDDh	cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Unclear	TTAGCTCAGTTGGGAGAGCACTTGCCTT	28	0	0	NA	NA	NA	2	2	Orphan	cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|230aa|down_2|NZ_CP050266.1_737726_738416_-	NA|439aa|up_9|NZ_CP050266.1_720466_721783_+	PRK10660, tilS, tRNA(Ile)-lysidine synthetase; Provisional	NA|450aa|up_8|NZ_CP050266.1_721906_723256_+	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain	NA|63aa|up_7|NZ_CP050266.1_723332_723521_-	pfam14056, DUF4250, Domain of unknown function (DUF4250)	NA|68aa|up_6|NZ_CP050266.1_723522_723726_-	PRK04964, PRK04964, hypothetical protein; Provisional	NA|285aa|up_5|NZ_CP050266.1_723787_724642_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|377aa|up_4|NZ_CP050266.1_724760_725891_-	cd07209, Pat_hypo_Ecoli_Z1214_like, Hypothetical patatin similar to Z1214 protein of Escherichia coli	NA|204aa|up_3|NZ_CP050266.1_726060_726672_+	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]	NA|572aa|up_2|NZ_CP050266.1_726718_728434_-	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional	NA|242aa|up_1|NZ_CP050266.1_728480_729206_-	pfam01980, UPF0066, Uncharacterized protein family UPF0066	NA|183aa|up_0|NZ_CP050266.1_729330_729879_+	PRK08942, PRK08942, D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA|132aa|down_0|NZ_CP050266.1_736309_736705_-	cd06661, GGCT_like, GGCT-like domains, also called AIG2-like family	NA|282aa|down_1|NZ_CP050266.1_736888_737734_+	PRK05421, PRK05421, endonuclease/exonuclease/phosphatase family protein	NA|230aa|down_2|NZ_CP050266.1_737726_738416_-	NA	NA|525aa|down_3|NZ_CP050266.1_738412_739987_-	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional	NA|253aa|down_4|NZ_CP050266.1_740057_740816_-	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase	NA|242aa|down_5|NZ_CP050266.1_740848_741574_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|155aa|down_6|NZ_CP050266.1_741582_742047_-	PRK00203, rnhA, ribonuclease H; Reviewed	DEDDh|241aa|down_7|NZ_CP050266.1_742098_742821_+	PRK05711, PRK05711, DNA polymerase III subunit epsilon; Provisional	NA|435aa|down_8|NZ_CP050266.1_742829_744134_+	TIGR03503, TIGR03503, TIGR03503 family protein	NA|815aa|down_9|NZ_CP050266.1_744208_746653_-	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed
GCF_011765565.1_ASM1176556v1	NZ_CP050266	Salinivibrio costicola strain M318 chromosome 1, complete sequence	2	1537432-1538781	1,1,2	CRISPRCasFinder,CRT,PILER-CR	no	cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f	cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Type III-C,Type III-D,Type I-F,Type III-A,Type III-B	TTTCTAAGCTGCCTATGCGGCAGTGAAC,TTTCTAAGCTGCCTATGCGGCAGTGAAC,TTTCTAAGCTGCCTATGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	22,22,21	22	TypeIII-C,TypeIII-D,TypeI-F,TypeIII-A,TypeIII-B	cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|174aa|down_2|NZ_CP050266.1_1539629_1540151_-	NA|535aa|up_9|NZ_CP050266.1_1523643_1525248_+	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional	NA|193aa|up_8|NZ_CP050266.1_1525322_1525901_-	pfam07603, DUF1566, Protein of unknown function (DUF1566)	NA|488aa|up_7|NZ_CP050266.1_1525900_1527364_-	pfam07603, DUF1566, Protein of unknown function (DUF1566)	NA|758aa|up_6|NZ_CP050266.1_1527410_1529684_-	pfam01483, P_proprotein, Proprotein convertase P-domain	NA|723aa|up_5|NZ_CP050266.1_1529693_1531862_-	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|683aa|up_4|NZ_CP050266.1_1531874_1533923_-	COG1770, PtrB, Protease II [Amino acid transport and metabolism]	NA|205aa|up_3|NZ_CP050266.1_1534088_1534703_+	TIGR03902, hypothetical_protein, rhomboid family GlyGly-CTERM serine protease	NA|161aa|up_2|NZ_CP050266.1_1534776_1535259_+	pfam11075, DUF2780, Protein of unknown function VcgC/VcgE (DUF2780)	NA|299aa|up_1|NZ_CP050266.1_1535378_1536275_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|327aa|up_0|NZ_CP050266.1_1536347_1537328_-	pfam04393, DUF535, Protein of unknown function (DUF535)	NA|79aa|down_0|NZ_CP050266.1_1539053_1539290_+	pfam11903, ParD_like, ParD-like antitoxin of type II bacterial toxin-antitoxin system	NA|116aa|down_1|NZ_CP050266.1_1539258_1539606_+	pfam15781, ParE-like_toxin, ParE-like toxin of type II bacterial toxin-antitoxin system	NA|174aa|down_2|NZ_CP050266.1_1539629_1540151_-	NA	cmr6gr7|350aa|down_3|NZ_CP050266.1_1540175_1541225_-	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	cmr5gr11|140aa|down_4|NZ_CP050266.1_1541227_1541647_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5	cmr4gr7|292aa|down_5|NZ_CP050266.1_1541650_1542526_-	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr3gr5|381aa|down_6|NZ_CP050266.1_1542549_1543692_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|616aa|down_7|NZ_CP050266.1_1543694_1545542_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|419aa|down_8|NZ_CP050266.1_1545545_1546802_-	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	NA|420aa|down_9|NZ_CP050266.1_1549112_1550372_-	pfam07804, HipA_C, HipA-like C-terminal domain
GCF_011765565.1_ASM1176556v1	NZ_CP050266	Salinivibrio costicola strain M318 chromosome 1, complete sequence	3	1546938-1548947	2,2,3	CRISPRCasFinder,CRT,PILER-CR	no	cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Type III-C,Type III-D,Type I-F,Type III-A,Type III-B	TTTCTAAGCTGCCTATGCGGCAGTGAAC,TTTCTAAGCTGCCTATGNGGCAGTGAAC,TTTCTAAGCTGCCTATGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	33,33,32	33	TypeIII-C,TypeIII-D,TypeI-F,TypeIII-A,TypeIII-B	cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	NA|174aa|up_6|NZ_CP050266.1_1539629_1540151_-,NA	NA|327aa|up_9|NZ_CP050266.1_1536347_1537328_-	pfam04393, DUF535, Protein of unknown function (DUF535)	NA|79aa|up_8|NZ_CP050266.1_1539053_1539290_+	pfam11903, ParD_like, ParD-like antitoxin of type II bacterial toxin-antitoxin system	NA|116aa|up_7|NZ_CP050266.1_1539258_1539606_+	pfam15781, ParE-like_toxin, ParE-like toxin of type II bacterial toxin-antitoxin system	NA|174aa|up_6|NZ_CP050266.1_1539629_1540151_-	NA	cmr6gr7|350aa|up_5|NZ_CP050266.1_1540175_1541225_-	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	cmr5gr11|140aa|up_4|NZ_CP050266.1_1541227_1541647_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5	cmr4gr7|292aa|up_3|NZ_CP050266.1_1541650_1542526_-	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr3gr5|381aa|up_2|NZ_CP050266.1_1542549_1543692_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|616aa|up_1|NZ_CP050266.1_1543694_1545542_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|419aa|up_0|NZ_CP050266.1_1545545_1546802_-	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	NA|420aa|down_0|NZ_CP050266.1_1549112_1550372_-	pfam07804, HipA_C, HipA-like C-terminal domain	NA|103aa|down_1|NZ_CP050266.1_1550355_1550664_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	cas6f|216aa|down_2|NZ_CP050266.1_1551467_1552115_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	cas7f|328aa|down_3|NZ_CP050266.1_1552124_1553108_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|331aa|down_4|NZ_CP050266.1_1553124_1554117_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|450aa|down_5|NZ_CP050266.1_1554116_1555466_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1146aa|down_6|NZ_CP050266.1_1555504_1558942_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|324aa|down_7|NZ_CP050266.1_1558938_1559910_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|108aa|down_8|NZ_CP050266.1_1560164_1560488_+	pfam05973, Gp49, Phage derived protein Gp49-like (DUF891)	NA|95aa|down_9|NZ_CP050266.1_1560480_1560765_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCF_011765565.1_ASM1176556v1	NZ_CP050266	Salinivibrio costicola strain M318 chromosome 1, complete sequence	4	1550870-1551317	3,3,4	CRISPRCasFinder,CRT,PILER-CR	no	cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DEDDh	cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Type III-C,Type III-D,Type I-F,Type III-A,Type III-B	TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TCTAAGCTGCCTGTGCGGCAGTGAAC	28,28,26	0	0	NA	NA	I-F:I-F:I-F	7,7,7	7	TypeIII-C,TypeIII-D,TypeI-F,TypeIII-A,TypeIII-B	cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	NA|174aa|up_8|NZ_CP050266.1_1539629_1540151_-,NA	NA|116aa|up_9|NZ_CP050266.1_1539258_1539606_+	pfam15781, ParE-like_toxin, ParE-like toxin of type II bacterial toxin-antitoxin system	NA|174aa|up_8|NZ_CP050266.1_1539629_1540151_-	NA	cmr6gr7|350aa|up_7|NZ_CP050266.1_1540175_1541225_-	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	cmr5gr11|140aa|up_6|NZ_CP050266.1_1541227_1541647_-	cd09749, Cmr5_III-B, CRISPR/Cas system-associated protein Cmr5	cmr4gr7|292aa|up_5|NZ_CP050266.1_1541650_1542526_-	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr3gr5|381aa|up_4|NZ_CP050266.1_1542549_1543692_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|616aa|up_3|NZ_CP050266.1_1543694_1545542_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|419aa|up_2|NZ_CP050266.1_1545545_1546802_-	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	NA|420aa|up_1|NZ_CP050266.1_1549112_1550372_-	pfam07804, HipA_C, HipA-like C-terminal domain	NA|103aa|up_0|NZ_CP050266.1_1550355_1550664_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	cas6f|216aa|down_0|NZ_CP050266.1_1551467_1552115_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	cas7f|328aa|down_1|NZ_CP050266.1_1552124_1553108_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|331aa|down_2|NZ_CP050266.1_1553124_1554117_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|450aa|down_3|NZ_CP050266.1_1554116_1555466_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1146aa|down_4|NZ_CP050266.1_1555504_1558942_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|324aa|down_5|NZ_CP050266.1_1558938_1559910_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|108aa|down_6|NZ_CP050266.1_1560164_1560488_+	pfam05973, Gp49, Phage derived protein Gp49-like (DUF891)	NA|95aa|down_7|NZ_CP050266.1_1560480_1560765_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|95aa|down_8|NZ_CP050266.1_1562084_1562369_+	pfam10985, DUF2805, Protein of unknown function (DUF2805)	NA|388aa|down_9|NZ_CP050266.1_1562690_1563854_-	PRK08310, PRK08310, amidase; Provisional
GCF_011765565.1_ASM1176556v1	NZ_CP050266	Salinivibrio costicola strain M318 chromosome 1, complete sequence	5	1560879-1561866	4,4,5	CRISPRCasFinder,CRT,PILER-CR	no	cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DEDDh	cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Type III-C, Type I-F?,Type I-F,Type III-B,Type III-A,Type III-D	TTTCTAAGCTGCCTATGCGGCAGTGAAC,TTTCTAAGCTGCCTATGCGGCAGTGAAC,TTTCTAAGCTGCCTATGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	16,16,16	16	TypeIII-C,TypeIII-D,TypeI-F?,TypeI-F,TypeIII-A,TypeIII-B	cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|420aa|up_9|NZ_CP050266.1_1549112_1550372_-	pfam07804, HipA_C, HipA-like C-terminal domain	NA|103aa|up_8|NZ_CP050266.1_1550355_1550664_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	cas6f|216aa|up_7|NZ_CP050266.1_1551467_1552115_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	cas7f|328aa|up_6|NZ_CP050266.1_1552124_1553108_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|331aa|up_5|NZ_CP050266.1_1553124_1554117_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|450aa|up_4|NZ_CP050266.1_1554116_1555466_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1146aa|up_3|NZ_CP050266.1_1555504_1558942_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|324aa|up_2|NZ_CP050266.1_1558938_1559910_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|108aa|up_1|NZ_CP050266.1_1560164_1560488_+	pfam05973, Gp49, Phage derived protein Gp49-like (DUF891)	NA|95aa|up_0|NZ_CP050266.1_1560480_1560765_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|95aa|down_0|NZ_CP050266.1_1562084_1562369_+	pfam10985, DUF2805, Protein of unknown function (DUF2805)	NA|388aa|down_1|NZ_CP050266.1_1562690_1563854_-	PRK08310, PRK08310, amidase; Provisional	NA|389aa|down_2|NZ_CP050266.1_1563974_1565141_-	smart00271, DnaJ, DnaJ molecular chaperone homology domain	NA|467aa|down_3|NZ_CP050266.1_1565644_1567045_+	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism]	NA|221aa|down_4|NZ_CP050266.1_1567168_1567831_-	pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase	NA|195aa|down_5|NZ_CP050266.1_1568151_1568736_+	PRK00170, PRK00170, azoreductase; Reviewed	DEDDh|474aa|down_6|NZ_CP050266.1_1568898_1570320_+	PRK11779, sbcB, exonuclease I; Provisional	NA|164aa|down_7|NZ_CP050266.1_1570519_1571011_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|249aa|down_8|NZ_CP050266.1_1571087_1571834_+	cd01007, PBP2_BvgS_HisK_like, The type 2 periplasmic ligand-binding protein domain of the sensor-kinase BvgS and histidine kinase receptors, and related proteins	NA|256aa|down_9|NZ_CP050266.1_1571835_1572603_+	cd13704, PBP2_HisK, The periplasmic sensor domain of histidine kinase receptors; the type 2 periplasmic binding fold protein
GCF_011765565.1_ASM1176556v1	NZ_CP050266	Salinivibrio costicola strain M318 chromosome 1, complete sequence	6	2006185-2006336	5	CRISPRCasFinder	no	DEDDh	cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Unclear	TTCCTTATCGCATCGATATTGTCTCTAAGTGTTTACCCTATCTGCTGCG	49	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	NA|55aa|up_6|NZ_CP050266.1_1997860_1998025_-,NA	NA|304aa|up_9|NZ_CP050266.1_1993580_1994492_-	PRK15406, PRK15406, oligopeptide ABC transporter permease OppC; Provisional	NA|307aa|up_8|NZ_CP050266.1_1994502_1995423_-	PRK09471, oppB, oligopeptide ABC transporter permease OppB	NA|557aa|up_7|NZ_CP050266.1_1995544_1997215_-	PRK15104, PRK15104, oligopeptide ABC transporter substrate-binding protein OppA; Provisional	NA|55aa|up_6|NZ_CP050266.1_1997860_1998025_-	NA	NA|135aa|up_5|NZ_CP050266.1_1998611_1999016_+	cd04776, HTH_GnyR, Helix-Turn-Helix DNA binding domain of the regulatory protein GnyR	NA|191aa|up_4|NZ_CP050266.1_1999206_1999779_+	COG2802, COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease [General function prediction only]	NA|301aa|up_3|NZ_CP050266.1_2000019_2000922_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|120aa|up_2|NZ_CP050266.1_2000883_2001243_-	pfam01627, Hpt, Hpt domain	NA|482aa|up_1|NZ_CP050266.1_2001260_2002706_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|676aa|up_0|NZ_CP050266.1_2003011_2005039_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|195aa|down_0|NZ_CP050266.1_2006569_2007154_+	PRK05151, PRK05151, electron transport complex protein RsxA; Provisional	NA|192aa|down_1|NZ_CP050266.1_2007150_2007726_+	PRK05113, PRK05113, electron transport complex protein RnfB; Provisional	NA|807aa|down_2|NZ_CP050266.1_2007725_2010146_+	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|360aa|down_3|NZ_CP050266.1_2010151_2011231_+	PRK00816, rnfD, electron transport complex protein RnfD; Reviewed	NA|212aa|down_4|NZ_CP050266.1_2011227_2011863_+	PRK01908, PRK01908, electron transport complex protein RnfG; Validated	NA|233aa|down_5|NZ_CP050266.1_2011862_2012561_+	PRK12405, PRK12405, electron transport complex RsxE subunit; Provisional	NA|214aa|down_6|NZ_CP050266.1_2012573_2013215_+	PRK10702, PRK10702, endonuclease III; Provisional	NA|139aa|down_7|NZ_CP050266.1_2013259_2013676_+	TIGR00068, Lactoylglutathione_lyase, lactoylglutathione lyase	NA|303aa|down_8|NZ_CP050266.1_2013762_2014671_-	pfam18393, MotY_N, MotY N-terminal domain	DEDDh|226aa|down_9|NZ_CP050266.1_2014797_2015475_+	PRK05168, PRK05168, ribonuclease T; Provisional
GCF_011765565.1_ASM1176556v1	NZ_CP050266	Salinivibrio costicola strain M318 chromosome 1, complete sequence	7	2467794-2468001	6	PILER-CR	no		cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	TTAGCTCAGTTGGGAGAGCACTTGCCTTTTAA	32	0	0	NA	NA	NA	2	2	Orphan	cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|71aa|down_0|NZ_CP050266.1_2470230_2470443_-	NA|273aa|up_9|NZ_CP050266.1_2455031_2455850_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|185aa|up_8|NZ_CP050266.1_2455866_2456421_+	COG0762, COG0762, Predicted integral membrane protein [Function unknown]	NA|99aa|up_7|NZ_CP050266.1_2456420_2456717_+	PRK05090, PRK05090, hypothetical protein; Validated	NA|147aa|up_6|NZ_CP050266.1_2456778_2457219_+	pfam14467, DUF4426, Domain of unknown function (DUF4426)	NA|199aa|up_5|NZ_CP050266.1_2457247_2457844_+	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed	NA|386aa|up_4|NZ_CP050266.1_2457846_2459004_+	PRK05660, PRK05660, radical SAM family heme chaperone HemW	NA|362aa|up_3|NZ_CP050266.1_2459104_2460190_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|342aa|up_2|NZ_CP050266.1_2460297_2461323_+	PRK09489, rsmC, 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	NA|527aa|up_1|NZ_CP050266.1_2461492_2463073_+	pfam00672, HAMP, HAMP domain	NA|301aa|up_0|NZ_CP050266.1_2463132_2464035_+	PRK10837, PRK10837, putative DNA-binding transcriptional regulator; Provisional	NA|71aa|down_0|NZ_CP050266.1_2470230_2470443_-	NA	NA|488aa|down_1|NZ_CP050266.1_2470518_2471982_-	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|167aa|down_2|NZ_CP050266.1_2472432_2472933_+	pfam06271, RDD, RDD family	NA|481aa|down_3|NZ_CP050266.1_2473452_2474895_+	COG1288, COG1288, Predicted membrane protein [Function unknown]	NA|407aa|down_4|NZ_CP050266.1_2475532_2476753_+	PRK01388, PRK01388, arginine deiminase; Provisional	NA|321aa|down_5|NZ_CP050266.1_2476811_2477774_+	PRK12354, PRK12354, carbamate kinase; Reviewed	NA|335aa|down_6|NZ_CP050266.1_2477800_2478805_+	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated	NA|163aa|down_7|NZ_CP050266.1_2478973_2479462_+	PRK05066, PRK05066, transcriptional regulator ArgR	NA|131aa|down_8|NZ_CP050266.1_2479528_2479921_+	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|187aa|down_9|NZ_CP050266.1_2479982_2480543_-	cd02885, IPP_Isomerase, Isopentenyl diphosphate (IPP) isomerase, a member of the Nudix hydrolase superfamily, is a key enzyme in the isoprenoid biosynthetic pathway
GCF_011765565.1_ASM1176556v1	NZ_CP050267	Salinivibrio costicola strain M318 chromosome 2, complete sequence	1	336275-338561	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DinG,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	Type I-E	CGGTTCATCCCCGTGGGCACGGGGAACAC,CGGTTCATCCCCGTGGGCACGGGGAACAC,CGGTTCATCCCCGTGGGCACGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	37,37,37	37	TypeI-E	cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	NA|106aa|up_0|NZ_CP050267.1_334696_335014_-,NA	NA|282aa|up_9|NZ_CP050267.1_324126_324972_-	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	NA|155aa|up_8|NZ_CP050267.1_325320_325785_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|552aa|up_7|NZ_CP050267.1_326150_327806_+	cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase	NA|99aa|up_6|NZ_CP050267.1_328054_328351_+	pfam04175, DUF406, Protein of unknown function (DUF406)	NA|205aa|up_5|NZ_CP050267.1_328406_329021_-	pfam12339, DNAJ_related, DNA-J related protein	NA|258aa|up_4|NZ_CP050267.1_329359_330133_+	cd01948, EAL, EAL domain	NA|462aa|up_3|NZ_CP050267.1_330282_331668_+	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|653aa|up_2|NZ_CP050267.1_331751_333710_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|116aa|up_1|NZ_CP050267.1_333953_334301_+	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown]	NA|106aa|up_0|NZ_CP050267.1_334696_335014_-	NA	cas2|99aa|down_0|NZ_CP050267.1_338639_338936_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NZ_CP050267.1_338939_339860_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|223aa|down_2|NZ_CP050267.1_339887_340556_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|250aa|down_3|NZ_CP050267.1_340542_341292_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|345aa|down_4|NZ_CP050267.1_341304_342339_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|186aa|down_5|NZ_CP050267.1_342355_342913_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|532aa|down_6|NZ_CP050267.1_342912_344508_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|910aa|down_7|NZ_CP050267.1_344504_347234_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|372aa|down_8|NZ_CP050267.1_347433_348549_-	PRK13579, gcvT, glycine cleavage system aminomethyltransferase GcvT	NA|201aa|down_9|NZ_CP050267.1_348631_349234_-	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain
GCF_011765565.1_ASM1176556v1	NZ_CP050269	Salinivibrio costicola strain M318 plasmid pM138.2, complete sequence	1	2769-3009	1	CRISPRCasFinder	no			Orphan	AAACACTAAAAAAATGTAACCATA	24	0	0	NA	NA	NA	4	4	Orphan	cas3,WYL,DEDDh,RT,csa3,DinG,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,cas2,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|94aa|down_0|NZ_CP050269.1_3185_3467_-,NA|118aa|down_2|NZ_CP050269.1_5775_6129_-,NA|122aa|down_3|NZ_CP050269.1_6426_6792_+,NA|310aa|down_4|NZ_CP050269.1_7323_8253_-,NA|109aa|down_5|NZ_CP050269.1_8685_9012_-,NA|100aa|down_6|NZ_CP050269.1_9004_9304_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|91aa|up_2|NZ_CP050269.1_373_646_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|199aa|up_1|NZ_CP050269.1_866_1463_-	PRK13413, mpi, master DNA invertase Mpi family serine-type recombinase	NA|360aa|up_0|NZ_CP050269.1_1600_2680_-	pfam01051, Rep_3, Initiator Replication protein	NA|94aa|down_0|NZ_CP050269.1_3185_3467_-	NA	NA|214aa|down_1|NZ_CP050269.1_3459_4101_-	PHA02518, PHA02518, ParA-like protein; Provisional	NA|118aa|down_2|NZ_CP050269.1_5775_6129_-	NA	NA|122aa|down_3|NZ_CP050269.1_6426_6792_+	NA	NA|310aa|down_4|NZ_CP050269.1_7323_8253_-	NA	NA|109aa|down_5|NZ_CP050269.1_8685_9012_-	NA	NA|100aa|down_6|NZ_CP050269.1_9004_9304_-	NA	NA|287aa|down_7|NZ_CP050269.1_9757_10618_-	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|209aa|down_8|NZ_CP050269.1_10907_11534_+	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme	NA|441aa|down_9|NZ_CP050269.1_11537_12860_-	TIGR00675, Modification_methylase, DNA-methyltransferase (dcm)
