assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011764545.1_ASM1176454v1	NZ_AP022870	Phytohabitans flavus strain NBRC 107702	1	677617-677714	1	CRISPRCasFinder	no	WYL	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	Unclear	CCGGCGGCCTCGGCCCAGACGGGCG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	NA|188aa|up_4|NZ_AP022870.1_671193_671757_-,NA|70aa|up_2|NZ_AP022870.1_672562_672772_+,NA|221aa|down_0|NZ_AP022870.1_678845_679508_+,NA|95aa|down_2|NZ_AP022870.1_680108_680393_+,NA|149aa|down_4|NZ_AP022870.1_683421_683868_-	NA|208aa|up_9|NZ_AP022870.1_665501_666125_-	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]	NA|569aa|up_8|NZ_AP022870.1_666133_667840_-	PRK13206, ureC, urease subunit alpha; Reviewed	NA|97aa|up_7|NZ_AP022870.1_667836_668127_-	pfam00699, Urease_beta, Urease beta subunit	NA|101aa|up_6|NZ_AP022870.1_668132_668435_-	pfam00547, Urease_gamma, Urease, gamma subunit	NA|607aa|up_5|NZ_AP022870.1_668612_670433_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|188aa|up_4|NZ_AP022870.1_671193_671757_-	NA	NA|231aa|up_3|NZ_AP022870.1_671761_672454_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|70aa|up_2|NZ_AP022870.1_672562_672772_+	NA	NA|460aa|up_1|NZ_AP022870.1_672798_674178_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|330aa|up_0|NZ_AP022870.1_674381_675371_-	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau	NA|221aa|down_0|NZ_AP022870.1_678845_679508_+	NA	NA|160aa|down_1|NZ_AP022870.1_679584_680064_+	pfam06103, DUF948, Bacterial protein of unknown function (DUF948)	NA|95aa|down_2|NZ_AP022870.1_680108_680393_+	NA	NA|896aa|down_3|NZ_AP022870.1_680389_683077_+	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|149aa|down_4|NZ_AP022870.1_683421_683868_-	NA	NA|455aa|down_5|NZ_AP022870.1_683939_685304_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|154aa|down_6|NZ_AP022870.1_686423_686885_+	pfam03652, RuvX, Holliday junction resolvase	NA|273aa|down_7|NZ_AP022870.1_688061_688880_+	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed	NA|393aa|down_8|NZ_AP022870.1_689012_690191_+	PRK05382, PRK05382, chorismate synthase; Validated	NA|169aa|down_9|NZ_AP022870.1_690187_690694_+	PRK00131, aroK, shikimate kinase; Reviewed
GCF_011764545.1_ASM1176454v1	NZ_AP022870	Phytohabitans flavus strain NBRC 107702	2	677785-678292	2	CRISPRCasFinder	no	WYL	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	Unclear	CCGGCGGCCTCGGCCCAGACGGGCG	25	1	2	677939-677958|677939-677958	NZ_AP022870.1_2882223-2882242|NZ_AP022870.1_2398780-2398761	NA	8	8	Orphan	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	NA|188aa|up_4|NZ_AP022870.1_671193_671757_-,NA|70aa|up_2|NZ_AP022870.1_672562_672772_+,NA|221aa|down_0|NZ_AP022870.1_678845_679508_+,NA|95aa|down_2|NZ_AP022870.1_680108_680393_+,NA|149aa|down_4|NZ_AP022870.1_683421_683868_-	NA|208aa|up_9|NZ_AP022870.1_665501_666125_-	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]	NA|569aa|up_8|NZ_AP022870.1_666133_667840_-	PRK13206, ureC, urease subunit alpha; Reviewed	NA|97aa|up_7|NZ_AP022870.1_667836_668127_-	pfam00699, Urease_beta, Urease beta subunit	NA|101aa|up_6|NZ_AP022870.1_668132_668435_-	pfam00547, Urease_gamma, Urease, gamma subunit	NA|607aa|up_5|NZ_AP022870.1_668612_670433_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|188aa|up_4|NZ_AP022870.1_671193_671757_-	NA	NA|231aa|up_3|NZ_AP022870.1_671761_672454_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|70aa|up_2|NZ_AP022870.1_672562_672772_+	NA	NA|460aa|up_1|NZ_AP022870.1_672798_674178_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|330aa|up_0|NZ_AP022870.1_674381_675371_-	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau	NA|221aa|down_0|NZ_AP022870.1_678845_679508_+	NA	NA|160aa|down_1|NZ_AP022870.1_679584_680064_+	pfam06103, DUF948, Bacterial protein of unknown function (DUF948)	NA|95aa|down_2|NZ_AP022870.1_680108_680393_+	NA	NA|896aa|down_3|NZ_AP022870.1_680389_683077_+	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|149aa|down_4|NZ_AP022870.1_683421_683868_-	NA	NA|455aa|down_5|NZ_AP022870.1_683939_685304_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|154aa|down_6|NZ_AP022870.1_686423_686885_+	pfam03652, RuvX, Holliday junction resolvase	NA|273aa|down_7|NZ_AP022870.1_688061_688880_+	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed	NA|393aa|down_8|NZ_AP022870.1_689012_690191_+	PRK05382, PRK05382, chorismate synthase; Validated	NA|169aa|down_9|NZ_AP022870.1_690187_690694_+	PRK00131, aroK, shikimate kinase; Reviewed
GCF_011764545.1_ASM1176454v1	NZ_AP022870	Phytohabitans flavus strain NBRC 107702	3	1883688-1883807	3	CRISPRCasFinder	no		csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	Orphan	CGCTTACTCCTTGACGGCGCCGGCGGCGAGGCCGCCGACGAC	42	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	NA|392aa|up_9|NZ_AP022870.1_1867719_1868895_+,NA|195aa|up_7|NZ_AP022870.1_1870176_1870761_+,NA|143aa|up_6|NZ_AP022870.1_1871367_1871796_-,NA|93aa|up_3|NZ_AP022870.1_1874130_1874409_+,NA	NA|392aa|up_9|NZ_AP022870.1_1867719_1868895_+	NA	NA|340aa|up_8|NZ_AP022870.1_1868901_1869921_-	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]	NA|195aa|up_7|NZ_AP022870.1_1870176_1870761_+	NA	NA|143aa|up_6|NZ_AP022870.1_1871367_1871796_-	NA	NA|393aa|up_5|NZ_AP022870.1_1871914_1873093_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|201aa|up_4|NZ_AP022870.1_1873089_1873692_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|93aa|up_3|NZ_AP022870.1_1874130_1874409_+	NA	NA|182aa|up_2|NZ_AP022870.1_1874451_1874997_-	cd18091, SpoU-like_TRM3-like, SAM-dependent tRNA methylase related to TRM3	NA|2074aa|up_1|NZ_AP022870.1_1875401_1881623_-	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|254aa|up_0|NZ_AP022870.1_1882901_1883663_-	COG3836, HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism]	NA|321aa|down_0|NZ_AP022870.1_1884586_1885549_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|414aa|down_1|NZ_AP022870.1_1885559_1886801_-	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|258aa|down_2|NZ_AP022870.1_1886803_1887577_-	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|335aa|down_3|NZ_AP022870.1_1887573_1888578_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|123aa|down_4|NZ_AP022870.1_1888579_1888948_-	pfam07883, Cupin_2, Cupin domain	NA|467aa|down_5|NZ_AP022870.1_1889049_1890450_-	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|406aa|down_6|NZ_AP022870.1_1890553_1891771_+	cd15488, Tm-1-like, ATP-binding domain found in plant Tm-1-like (Tm-1L) and similar proteins	NA|277aa|down_7|NZ_AP022870.1_1891792_1892623_+	pfam09370, PEP_hydrolase, Phosphoenolpyruvate hydrolase-like	NA|332aa|down_8|NZ_AP022870.1_1892635_1893631_-	cd19075, AKR_AKR7A1-5, AKR7A family of aldo-keto reductase (AKR)	NA|417aa|down_9|NZ_AP022870.1_1893774_1895025_+	pfam07005, DUF1537, Putative sugar-binding N-terminal domain
GCF_011764545.1_ASM1176454v1	NZ_AP022870	Phytohabitans flavus strain NBRC 107702	4	2830868-2830962	4	CRISPRCasFinder	no		csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	Orphan	GCTGCCCGGCGGCGGCCGCCGGC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	NA|218aa|up_3|NZ_AP022870.1_2827231_2827885_+,NA|173aa|up_2|NZ_AP022870.1_2827912_2828431_-,NA|80aa|down_4|NZ_AP022870.1_2841390_2841630_+,NA|519aa|down_6|NZ_AP022870.1_2842166_2843723_+	NA|304aa|up_9|NZ_AP022870.1_2820762_2821674_-	pfam13469, Sulfotransfer_3, Sulfotransferase family	NA|407aa|up_8|NZ_AP022870.1_2821670_2822891_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|294aa|up_7|NZ_AP022870.1_2822927_2823809_+	pfam13469, Sulfotransfer_3, Sulfotransferase family	NA|255aa|up_6|NZ_AP022870.1_2823827_2824592_+	pfam13469, Sulfotransfer_3, Sulfotransferase family	NA|441aa|up_5|NZ_AP022870.1_2824693_2826016_+	pfam01229, Glyco_hydro_39, Glycosyl hydrolases family 39	NA|390aa|up_4|NZ_AP022870.1_2826061_2827231_+	COG4637, COG4637, Predicted ATPase [General function prediction only]	NA|218aa|up_3|NZ_AP022870.1_2827231_2827885_+	NA	NA|173aa|up_2|NZ_AP022870.1_2827912_2828431_-	NA	NA|265aa|up_1|NZ_AP022870.1_2828459_2829254_-	pfam00685, Sulfotransfer_1, Sulfotransferase domain	NA|510aa|up_0|NZ_AP022870.1_2829315_2830845_-	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|461aa|down_0|NZ_AP022870.1_2831823_2833206_-	pfam04932, Wzy_C, O-Antigen ligase	NA|417aa|down_1|NZ_AP022870.1_2833272_2834523_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|252aa|down_2|NZ_AP022870.1_2836731_2837487_-	pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase	NA|326aa|down_3|NZ_AP022870.1_2837543_2838521_-	PRK08241, PRK08241, RNA polymerase subunit sigma-70	NA|80aa|down_4|NZ_AP022870.1_2841390_2841630_+	NA	NA|179aa|down_5|NZ_AP022870.1_2841626_2842163_+	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|519aa|down_6|NZ_AP022870.1_2842166_2843723_+	NA	NA|509aa|down_7|NZ_AP022870.1_2843713_2845240_+	pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase	NA|182aa|down_8|NZ_AP022870.1_2845317_2845863_+	TIGR02983, putative_RNA_polymerase_ECF-subfamily_sigma_factor, RNA polymerase sigma-70 factor, sigma-E family	NA|406aa|down_9|NZ_AP022870.1_2845859_2847077_+	cd15482, Sialidase_non-viral, Non-viral sialidases
GCF_011764545.1_ASM1176454v1	NZ_AP022870	Phytohabitans flavus strain NBRC 107702	5	4117859-4117971	5	CRISPRCasFinder	no		csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	Orphan	CACCGATGCGCCCGGTCTCAGGCGACAGCACC	32	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	NA,NA	NA|542aa|up_9|NZ_AP022870.1_4107757_4109383_-	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|286aa|up_8|NZ_AP022870.1_4109465_4110323_-	pfam12704, MacB_PCD, MacB-like periplasmic core domain	NA|267aa|up_7|NZ_AP022870.1_4110322_4111123_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|299aa|up_6|NZ_AP022870.1_4111186_4112083_-	TIGR03560, F420_Rv1855c, probable F420-dependent oxidoreductase, Rv1855c family	NA|379aa|up_5|NZ_AP022870.1_4112123_4113260_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|222aa|up_4|NZ_AP022870.1_4113256_4113922_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|180aa|up_3|NZ_AP022870.1_4113888_4114428_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|196aa|up_2|NZ_AP022870.1_4114619_4115207_+	COG3963, COG3963, Phospholipid N-methyltransferase [Lipid metabolism]	NA|155aa|up_1|NZ_AP022870.1_4115375_4115840_+	pfam06718, DUF1203, Protein of unknown function (DUF1203)	NA|272aa|up_0|NZ_AP022870.1_4115820_4116636_-	TIGR03666, Rv2061_F420, PPOX class probable F420-dependent enzyme, Rv2061 family	NA|177aa|down_0|NZ_AP022870.1_4118806_4119337_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|455aa|down_1|NZ_AP022870.1_4119347_4120712_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|276aa|down_2|NZ_AP022870.1_4120686_4121514_-	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal	NA|440aa|down_3|NZ_AP022870.1_4121814_4123134_-	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites	NA|447aa|down_4|NZ_AP022870.1_4123281_4124622_+	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|283aa|down_5|NZ_AP022870.1_4124621_4125470_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|250aa|down_6|NZ_AP022870.1_4125612_4126362_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|372aa|down_7|NZ_AP022870.1_4126447_4127563_+	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]	NA|237aa|down_8|NZ_AP022870.1_4128829_4129540_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|103aa|down_9|NZ_AP022870.1_4129540_4129849_+	cd06982, cupin_BauB-like, Pseudomonas aeruginosa BauB and related proteins, cupin domain
GCF_011764545.1_ASM1176454v1	NZ_AP022870	Phytohabitans flavus strain NBRC 107702	6	4252463-4252544	6	CRISPRCasFinder	no		csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	Orphan	CCGGTCACGAGACCTCCAAAAGA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	NA,NA|132aa|down_0|NZ_AP022870.1_4253823_4254219_+,NA|83aa|down_9|NZ_AP022870.1_4273040_4273289_+	NA|378aa|up_9|NZ_AP022870.1_4238778_4239912_-	PRK07588, PRK07588, FAD-binding domain	NA|202aa|up_8|NZ_AP022870.1_4239985_4240591_+	TIGR03968, transcriptional_regulator_TetR_family, mycofactocin system transcriptional regulator	NA|210aa|up_7|NZ_AP022870.1_4240605_4241235_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|295aa|up_6|NZ_AP022870.1_4241132_4242017_-	sd00044, HEAT, HEAT repeats	NA|694aa|up_5|NZ_AP022870.1_4242133_4244215_+	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|636aa|up_4|NZ_AP022870.1_4244651_4246559_-	COG2372, CopC, Uncharacterized protein, homolog of Cu resistance protein CopC [General function prediction only]	NA|591aa|up_3|NZ_AP022870.1_4246619_4248392_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|189aa|up_2|NZ_AP022870.1_4248469_4249036_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|529aa|up_1|NZ_AP022870.1_4249155_4250742_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|204aa|up_0|NZ_AP022870.1_4251798_4252410_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|132aa|down_0|NZ_AP022870.1_4253823_4254219_+	NA	NA|459aa|down_1|NZ_AP022870.1_4254988_4256365_-	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like	NA|369aa|down_2|NZ_AP022870.1_4257228_4258335_+	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase	NA|141aa|down_3|NZ_AP022870.1_4258354_4258777_+	pfam02502, LacAB_rpiB, Ribose/Galactose Isomerase	NA|1106aa|down_4|NZ_AP022870.1_4259434_4262752_+	pfam06283, ThuA, Trehalose utilisation	NA|143aa|down_5|NZ_AP022870.1_4265447_4265876_-	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|307aa|down_6|NZ_AP022870.1_4266417_4267338_+	cd02871, GH18_chitinase_D-like, GH18 domain of Chitinase D (ChiD)	NA|1041aa|down_7|NZ_AP022870.1_4269088_4272211_+	PRK15098, PRK15098, beta-glucosidase BglX	NA|146aa|down_8|NZ_AP022870.1_4272272_4272710_+	pfam08044, DUF1707, Domain of unknown function (DUF1707)	NA|83aa|down_9|NZ_AP022870.1_4273040_4273289_+	NA
GCF_011764545.1_ASM1176454v1	NZ_AP022870	Phytohabitans flavus strain NBRC 107702	7	5047199-5047405	7	CRISPRCasFinder	no		csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	Orphan	GGATCACCCCCGCATGCGCGGGAGCAG	27	0	0	NA	NA	NA	3	3	Orphan	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	NA,NA|95aa|down_2|NZ_AP022870.1_5052100_5052385_+,NA|615aa|down_6|NZ_AP022870.1_5055549_5057394_-,NA|88aa|down_7|NZ_AP022870.1_5057653_5057917_-,NA|69aa|down_9|NZ_AP022870.1_5058474_5058681_+	NA|300aa|up_9|NZ_AP022870.1_5035084_5035984_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|442aa|up_8|NZ_AP022870.1_5036015_5037341_+	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1	NA|408aa|up_7|NZ_AP022870.1_5037399_5038623_+	pfam02515, CoA_transf_3, CoA-transferase family III	NA|338aa|up_6|NZ_AP022870.1_5038642_5039656_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|301aa|up_5|NZ_AP022870.1_5039652_5040555_+	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|254aa|up_4|NZ_AP022870.1_5040551_5041313_+	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily	NA|410aa|up_3|NZ_AP022870.1_5041309_5042539_+	pfam02515, CoA_transf_3, CoA-transferase family III	NA|538aa|up_2|NZ_AP022870.1_5042706_5044320_+	cd08491, PBP2_NikA_DppA_OppA_like_12, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|266aa|up_1|NZ_AP022870.1_5044382_5045180_+	COG3836, HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism]	NA|307aa|up_0|NZ_AP022870.1_5045191_5046112_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|415aa|down_0|NZ_AP022870.1_5048164_5049409_+	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain	NA|484aa|down_1|NZ_AP022870.1_5050232_5051684_+	pfam06119, NIDO, Nidogen-like	NA|95aa|down_2|NZ_AP022870.1_5052100_5052385_+	NA	NA|235aa|down_3|NZ_AP022870.1_5052489_5053194_+	cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|276aa|down_4|NZ_AP022870.1_5053277_5054105_-	pfam02909, TetR_C, Tetracyclin repressor, C-terminal all-alpha domain	NA|380aa|down_5|NZ_AP022870.1_5054344_5055484_+	COG2311, COG2311, Predicted membrane protein [Function unknown]	NA|615aa|down_6|NZ_AP022870.1_5055549_5057394_-	NA	NA|88aa|down_7|NZ_AP022870.1_5057653_5057917_-	NA	NA|138aa|down_8|NZ_AP022870.1_5057968_5058382_-	pfam18029, Glyoxalase_6, Glyoxalase-like domain	NA|69aa|down_9|NZ_AP022870.1_5058474_5058681_+	NA
GCF_011764545.1_ASM1176454v1	NZ_AP022870	Phytohabitans flavus strain NBRC 107702	8	5089788-5089879	8	CRISPRCasFinder	no		csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	Orphan	TGCCGCGCGAACTCGGCCGGCTG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	NA|141aa|up_8|NZ_AP022870.1_5078400_5078823_-,NA|63aa|up_7|NZ_AP022870.1_5078855_5079044_-,NA|78aa|down_1|NZ_AP022870.1_5093943_5094177_-	NA|222aa|up_9|NZ_AP022870.1_5077668_5078334_+	pfam13529, Peptidase_C39_2, Peptidase_C39 like family	NA|141aa|up_8|NZ_AP022870.1_5078400_5078823_-	NA	NA|63aa|up_7|NZ_AP022870.1_5078855_5079044_-	NA	NA|324aa|up_6|NZ_AP022870.1_5080776_5081748_-	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR)	NA|637aa|up_5|NZ_AP022870.1_5081888_5083799_-	pfam00135, COesterase, Carboxylesterase family	NA|240aa|up_4|NZ_AP022870.1_5083738_5084458_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|203aa|up_3|NZ_AP022870.1_5085504_5086113_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|288aa|up_2|NZ_AP022870.1_5086265_5087129_+	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain	NA|219aa|up_1|NZ_AP022870.1_5087169_5087826_+	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only]	NA|228aa|up_0|NZ_AP022870.1_5087895_5088579_+	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs	NA|478aa|down_0|NZ_AP022870.1_5092330_5093764_+	pfam13576, Pentapeptide_3, Pentapeptide repeats (9 copies)	NA|78aa|down_1|NZ_AP022870.1_5093943_5094177_-	NA	NA|191aa|down_2|NZ_AP022870.1_5094223_5094796_-	pfam13305, WHG, WHG domain	NA|162aa|down_3|NZ_AP022870.1_5094856_5095342_+	pfam16571, FBP_C, FBP C-terminal treble-clef zinc-finger	NA|796aa|down_4|NZ_AP022870.1_5095358_5097746_-	COG3903, COG3903, Predicted ATPase [General function prediction only]	NA|46aa|down_5|NZ_AP022870.1_5097742_5097880_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|51aa|down_6|NZ_AP022870.1_5097947_5098100_-	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]	NA|849aa|down_7|NZ_AP022870.1_5098096_5100643_-	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|1266aa|down_8|NZ_AP022870.1_5102475_5106273_-	pfam12255, TcdB_toxin_midC, Insecticide toxin TcdB middle/C-terminal region	NA|110aa|down_9|NZ_AP022870.1_5108259_5108589_-	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins
GCF_011764545.1_ASM1176454v1	NZ_AP022870	Phytohabitans flavus strain NBRC 107702	9	5177719-5178175	9,1,1	CRISPRCasFinder,CRT,PILER-CR	no		csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	Orphan	GGGACCATCCCCGCGTGCGCGGGGAGCAC,GGACCATCCCCGCGTGCGCGGGGAGCAC,GGACCATCCCCGCGTGCGCGGGGAGCAC	29,28,28	0	0	NA	NA	I-E:I-E:I-E	7,7,5	7	Orphan	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	NA|51aa|up_3|NZ_AP022870.1_5172627_5172780_+,NA|90aa|up_0|NZ_AP022870.1_5177389_5177659_-,NA|91aa|down_0|NZ_AP022870.1_5179457_5179730_-,NA|164aa|down_2|NZ_AP022870.1_5181246_5181738_-	NA|609aa|up_9|NZ_AP022870.1_5165219_5167046_-	cd09143, PLDc_vPLD1_2_like_bac_2, Catalytic domain, repeat 2, of uncharacterized bacterial proteins with similarity to vertebrate phospholipases, PLD1 and PLD2	NA|116aa|up_8|NZ_AP022870.1_5168511_5168859_+	COG3795, COG3795, Uncharacterized protein conserved in bacteria [Function unknown]	NA|410aa|up_7|NZ_AP022870.1_5168855_5170085_+	COG4941, COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription]	NA|194aa|up_6|NZ_AP022870.1_5170044_5170626_-	COG1510, COG1510, Predicted transcriptional regulators [Transcription]	NA|304aa|up_5|NZ_AP022870.1_5170742_5171654_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|284aa|up_4|NZ_AP022870.1_5171668_5172520_+	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein	NA|51aa|up_3|NZ_AP022870.1_5172627_5172780_+	NA	NA|149aa|up_2|NZ_AP022870.1_5172946_5173393_+	cd17788, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria	NA|433aa|up_1|NZ_AP022870.1_5173389_5174688_+	cd01116, P_permease, Permease P (pink-eyed dilution)	NA|90aa|up_0|NZ_AP022870.1_5177389_5177659_-	NA	NA|91aa|down_0|NZ_AP022870.1_5179457_5179730_-	NA	NA|116aa|down_1|NZ_AP022870.1_5180491_5180839_+	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|164aa|down_2|NZ_AP022870.1_5181246_5181738_-	NA	NA|133aa|down_3|NZ_AP022870.1_5182656_5183055_+	COG0251, TdcF, Putative translation initiation inhibitor, yjgF family [Translation, ribosomal structure and biogenesis]	NA|373aa|down_4|NZ_AP022870.1_5183091_5184210_+	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	NA|918aa|down_5|NZ_AP022870.1_5184336_5187090_+	cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin	NA|726aa|down_6|NZ_AP022870.1_5189356_5191534_+	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|224aa|down_7|NZ_AP022870.1_5192279_5192951_+	pfam11361, DUF3159, Protein of unknown function (DUF3159)	NA|176aa|down_8|NZ_AP022870.1_5193032_5193560_+	cd04697, Nudix_Hydrolase_38, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|98aa|down_9|NZ_AP022870.1_5193556_5193850_-	COG4298, COG4298, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_011764545.1_ASM1176454v1	NZ_AP022870	Phytohabitans flavus strain NBRC 107702	10	6879192-6879288	10	CRISPRCasFinder	no		csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	Orphan	CACGCTGGCACGCCGCCGCTAAGC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	NA|305aa|up_4|NZ_AP022870.1_6871384_6872299_-,NA|71aa|up_3|NZ_AP022870.1_6872295_6872508_-,NA	NA|286aa|up_9|NZ_AP022870.1_6866370_6867228_-	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]	NA|522aa|up_8|NZ_AP022870.1_6867409_6868975_+	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|245aa|up_7|NZ_AP022870.1_6868969_6869704_-	pfam13398, Peptidase_M50B, Peptidase M50B-like	NA|259aa|up_6|NZ_AP022870.1_6869769_6870546_-	cd06412, GH25_CH-type, CH-type (Chalaropsis-type) lysozymes represent one of four functionally-defined classes of peptidoglycan hydrolases (also referred to as endo-N-acetylmuramidases) that cleave bacterial cell wall peptidoglycans	NA|231aa|up_5|NZ_AP022870.1_6870663_6871356_-	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls	NA|305aa|up_4|NZ_AP022870.1_6871384_6872299_-	NA	NA|71aa|up_3|NZ_AP022870.1_6872295_6872508_-	NA	NA|610aa|up_2|NZ_AP022870.1_6872547_6874377_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|169aa|up_1|NZ_AP022870.1_6874897_6875404_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|219aa|up_0|NZ_AP022870.1_6877906_6878563_+	PRK00148, PRK00148, Maf-like protein; Reviewed	NA|249aa|down_0|NZ_AP022870.1_6880690_6881437_-	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein	NA|318aa|down_1|NZ_AP022870.1_6881440_6882394_-	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit	NA|190aa|down_2|NZ_AP022870.1_6886374_6886944_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|161aa|down_3|NZ_AP022870.1_6887030_6887513_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|320aa|down_4|NZ_AP022870.1_6887509_6888469_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|278aa|down_5|NZ_AP022870.1_6888465_6889299_+	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|403aa|down_6|NZ_AP022870.1_6889304_6890513_-	PRK12305, thrS, threonyl-tRNA synthetase; Reviewed	NA|288aa|down_7|NZ_AP022870.1_6890671_6891535_-	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|313aa|down_8|NZ_AP022870.1_6891534_6892473_-	pfam04168, Alpha-E, A predicted alpha-helical domain with a conserved ER motif	NA|529aa|down_9|NZ_AP022870.1_6892466_6894053_-	COG2308, COG2308, Uncharacterized conserved protein [Function unknown]
GCF_011764545.1_ASM1176454v1	NZ_AP022870	Phytohabitans flavus strain NBRC 107702	11	7024275-7024361	11	CRISPRCasFinder	no		csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	Orphan	GGCTGGGCGCGCGGCGTTCTACA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	NA|259aa|up_9|NZ_AP022870.1_7014168_7014945_+,NA|163aa|up_2|NZ_AP022870.1_7020481_7020970_+,NA	NA|259aa|up_9|NZ_AP022870.1_7014168_7014945_+	NA	NA|122aa|up_8|NZ_AP022870.1_7015279_7015645_+	pfam05901, Excalibur, Excalibur calcium-binding domain	NA|191aa|up_7|NZ_AP022870.1_7015719_7016292_+	pfam13828, DUF4190, Domain of unknown function (DUF4190)	NA|265aa|up_6|NZ_AP022870.1_7016317_7017112_-	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|139aa|up_5|NZ_AP022870.1_7017217_7017634_+	pfam13828, DUF4190, Domain of unknown function (DUF4190)	NA|318aa|up_4|NZ_AP022870.1_7017637_7018591_-	COG2301, CitE, Citrate lyase beta subunit [Carbohydrate transport and metabolism]	NA|234aa|up_3|NZ_AP022870.1_7019740_7020442_+	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive	NA|163aa|up_2|NZ_AP022870.1_7020481_7020970_+	NA	NA|284aa|up_1|NZ_AP022870.1_7021505_7022357_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|184aa|up_0|NZ_AP022870.1_7023642_7024194_+	pfam06210, DUF1003, Protein of unknown function (DUF1003)	NA|432aa|down_0|NZ_AP022870.1_7026307_7027603_-	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|193aa|down_1|NZ_AP022870.1_7027848_7028427_+	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|498aa|down_2|NZ_AP022870.1_7028400_7029894_-	cd00433, Peptidase_M17, Cytosol aminopeptidase family, N-terminal and catalytic domains	NA|56aa|down_3|NZ_AP022870.1_7030017_7030185_-	pfam11314, DUF3117, Protein of unknown function (DUF3117)	NA|264aa|down_4|NZ_AP022870.1_7031239_7032031_+	PRK08140, PRK08140, enoyl-CoA hydratase; Provisional	NA|190aa|down_5|NZ_AP022870.1_7032697_7033267_-	pfam03352, Adenine_glyco, Methyladenine glycosylase	NA|161aa|down_6|NZ_AP022870.1_7033266_7033749_-	cd07812, SRPBCC, START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily	NA|242aa|down_7|NZ_AP022870.1_7033745_7034471_-	TIGR03544, cell_division_initiation_protein_DivIVA, DivIVA domain	NA|289aa|down_8|NZ_AP022870.1_7034535_7035402_+	TIGR01496, Dihydropteroate_synthase, dihydropteroate synthase	NA|126aa|down_9|NZ_AP022870.1_7035406_7035784_-	PRK07756, PRK07756, NADH-quinone oxidoreductase subunit A
GCF_011764545.1_ASM1176454v1	NZ_AP022870	Phytohabitans flavus strain NBRC 107702	12	7686817-7686910	12	CRISPRCasFinder	no		csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	Orphan	GCTCATGGCCGTCCTCGCTTCGG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	NA|79aa|up_9|NZ_AP022870.1_7673403_7673640_+,NA|879aa|up_3|NZ_AP022870.1_7678659_7681296_-,NA|186aa|up_1|NZ_AP022870.1_7684630_7685188_+,NA|222aa|down_0|NZ_AP022870.1_7686979_7687645_-,NA|130aa|down_2|NZ_AP022870.1_7689260_7689650_+	NA|79aa|up_9|NZ_AP022870.1_7673403_7673640_+	NA	NA|71aa|up_8|NZ_AP022870.1_7673780_7673993_-	pfam11273, DUF3073, Protein of unknown function (DUF3073)	NA|361aa|up_7|NZ_AP022870.1_7674208_7675291_-	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]	NA|70aa|up_6|NZ_AP022870.1_7676556_7676766_+	cd04762, HTH_MerR-trunc, Helix-Turn-Helix DNA binding domain of truncated MerR-like proteins	NA|248aa|up_5|NZ_AP022870.1_7676907_7677651_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|358aa|up_4|NZ_AP022870.1_7677647_7678721_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|879aa|up_3|NZ_AP022870.1_7678659_7681296_-	NA	NA|1058aa|up_2|NZ_AP022870.1_7681292_7684466_-	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|186aa|up_1|NZ_AP022870.1_7684630_7685188_+	NA	NA|398aa|up_0|NZ_AP022870.1_7685322_7686516_+	pfam13367, PrsW-protease, Protease prsW family	NA|222aa|down_0|NZ_AP022870.1_7686979_7687645_-	NA	NA|448aa|down_1|NZ_AP022870.1_7687739_7689083_-	cd06346, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|130aa|down_2|NZ_AP022870.1_7689260_7689650_+	NA	NA|159aa|down_3|NZ_AP022870.1_7689934_7690411_-	cd04676, Nudix_Hydrolase_17, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|272aa|down_4|NZ_AP022870.1_7690948_7691764_-	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins	NA|184aa|down_5|NZ_AP022870.1_7691808_7692360_-	PRK03759, PRK03759, isopentenyl-diphosphate Delta-isomerase	NA|498aa|down_6|NZ_AP022870.1_7692356_7693850_-	TIGR02734, Phytoene_desaturase_lycopene-forming, phytoene desaturase	NA|529aa|down_7|NZ_AP022870.1_7695280_7696867_+	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins	NA|187aa|down_8|NZ_AP022870.1_7697507_7698068_+	cd03386, PAP2_Aur1_like, PAP2_like proteins, Aur1_like subfamily	NA|370aa|down_9|NZ_AP022870.1_7698080_7699190_-	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan
GCF_011764545.1_ASM1176454v1	NZ_AP022870	Phytohabitans flavus strain NBRC 107702	13	9439666-9439769	13	CRISPRCasFinder	no		csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	Orphan	TGGGTCATCGCGCGCCGCCTTCCG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	NA|290aa|up_9|NZ_AP022870.1_9425744_9426614_+,NA|169aa|up_7|NZ_AP022870.1_9427602_9428109_-,NA|187aa|up_6|NZ_AP022870.1_9428166_9428727_+,NA|85aa|up_0|NZ_AP022870.1_9438504_9438759_-,NA|148aa|down_2|NZ_AP022870.1_9443409_9443853_+,NA|56aa|down_4|NZ_AP022870.1_9445200_9445368_-,NA|306aa|down_9|NZ_AP022870.1_9452583_9453501_-	NA|290aa|up_9|NZ_AP022870.1_9425744_9426614_+	NA	NA|321aa|up_8|NZ_AP022870.1_9426610_9427573_+	pfam03496, ADPrib_exo_Tox, ADP-ribosyltransferase exoenzyme	NA|169aa|up_7|NZ_AP022870.1_9427602_9428109_-	NA	NA|187aa|up_6|NZ_AP022870.1_9428166_9428727_+	NA	NA|412aa|up_5|NZ_AP022870.1_9428744_9429980_+	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin	NA|464aa|up_4|NZ_AP022870.1_9429984_9431376_-	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|469aa|up_3|NZ_AP022870.1_9431382_9432789_-	TIGR03920, T7SS_EccD, type VII secretion integral membrane protein EccD	NA|1322aa|up_2|NZ_AP022870.1_9432893_9436859_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|357aa|up_1|NZ_AP022870.1_9436925_9437996_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|85aa|up_0|NZ_AP022870.1_9438504_9438759_-	NA	NA|560aa|down_0|NZ_AP022870.1_9441124_9442804_-	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K	NA|140aa|down_1|NZ_AP022870.1_9442892_9443312_-	pfam01641, SelR, SelR domain	NA|148aa|down_2|NZ_AP022870.1_9443409_9443853_+	NA	NA|344aa|down_3|NZ_AP022870.1_9443934_9444966_+	cd04865, LigD_Pol_like_2, LigD_Pol_like_2: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 2	NA|56aa|down_4|NZ_AP022870.1_9445200_9445368_-	NA	NA|139aa|down_5|NZ_AP022870.1_9445884_9446301_+	COG5516, COG5516, Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding [General function prediction only]	NA|150aa|down_6|NZ_AP022870.1_9449046_9449496_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|519aa|down_7|NZ_AP022870.1_9450097_9451654_-	pfam08386, Abhydrolase_4, TAP-like protein	NA|256aa|down_8|NZ_AP022870.1_9451729_9452497_-	cd08545, YcnI_like, Reeler-like domain of YcnI and similar proteins	NA|306aa|down_9|NZ_AP022870.1_9452583_9453501_-	NA
GCF_011764545.1_ASM1176454v1	NZ_AP022870	Phytohabitans flavus strain NBRC 107702	14	9445831-9445939	14	CRISPRCasFinder	no		csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	Orphan	CGGGCACAGCGCGGGGCGCCTGCGGA	26	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas2,csm3gr7,cas10,csx10gr5,cas6,cas4,DEDDh,DinG,cas3	NA|85aa|up_7|NZ_AP022870.1_9438504_9438759_-,NA|148aa|up_2|NZ_AP022870.1_9443409_9443853_+,NA|56aa|up_0|NZ_AP022870.1_9445200_9445368_-,NA|306aa|down_3|NZ_AP022870.1_9452583_9453501_-	NA|1322aa|up_9|NZ_AP022870.1_9432893_9436859_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|357aa|up_8|NZ_AP022870.1_9436925_9437996_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|85aa|up_7|NZ_AP022870.1_9438504_9438759_-	NA	NA|306aa|up_6|NZ_AP022870.1_9438755_9439673_-	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	NA|418aa|up_5|NZ_AP022870.1_9439749_9441003_-	pfam11203, EccE, Putative type VII ESX secretion system translocon, EccE	NA|560aa|up_4|NZ_AP022870.1_9441124_9442804_-	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K	NA|140aa|up_3|NZ_AP022870.1_9442892_9443312_-	pfam01641, SelR, SelR domain	NA|148aa|up_2|NZ_AP022870.1_9443409_9443853_+	NA	NA|344aa|up_1|NZ_AP022870.1_9443934_9444966_+	cd04865, LigD_Pol_like_2, LigD_Pol_like_2: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 2	NA|56aa|up_0|NZ_AP022870.1_9445200_9445368_-	NA	NA|150aa|down_0|NZ_AP022870.1_9449046_9449496_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|519aa|down_1|NZ_AP022870.1_9450097_9451654_-	pfam08386, Abhydrolase_4, TAP-like protein	NA|256aa|down_2|NZ_AP022870.1_9451729_9452497_-	cd08545, YcnI_like, Reeler-like domain of YcnI and similar proteins	NA|306aa|down_3|NZ_AP022870.1_9452583_9453501_-	NA	NA|296aa|down_4|NZ_AP022870.1_9453866_9454754_-	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair]	NA|250aa|down_5|NZ_AP022870.1_9455057_9455807_-	pfam13628, DUF4142, Domain of unknown function (DUF4142)	NA|265aa|down_6|NZ_AP022870.1_9457044_9457839_-	pfam13490, zf-HC2, Putative zinc-finger	NA|230aa|down_7|NZ_AP022870.1_9457835_9458525_-	PRK09645, PRK09645, ECF RNA polymerase sigma factor SigL	NA|285aa|down_8|NZ_AP022870.1_9458621_9459476_-	COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism]	NA|317aa|down_9|NZ_AP022870.1_9459497_9460448_-	COG2380, COG2380, Uncharacterized protein conserved in bacteria [Function unknown]
