assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011764485.1_ASM1176448v1	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	1	496142-496575	1,1,1	CRISPRCasFinder,PILER-CR,CRT	no	cas9,c2c9_V-U4	c2c9_V-U4,cas9,DEDDh,cas6e,csf3gr5,csf2gr7,DinG	Type II-B,Type II-A,,Type II-C	TGCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAATT,GCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAAT,GCTGCGGTTGGACCGCACCTCGTTCCTTGCTAGAAT	38,36,36	0	0	NA	NA	NA:NA:NA	6,6,6	6	,TypeII-B,TypeII-A,TypeII-C	csa3,DEDDh,WYL,cas3,c2c9_V-U4,cas9,cas6e,csf3gr5,csf2gr7,DinG	NA|173aa|up_9|NZ_AP022849.1_488169_488688_-,NA|164aa|up_8|NZ_AP022849.1_488780_489272_-,NA|164aa|up_5|NZ_AP022849.1_491601_492093_-,NA|128aa|up_4|NZ_AP022849.1_492043_492427_-,NA|142aa|up_3|NZ_AP022849.1_492474_492900_-,NA|310aa|up_2|NZ_AP022849.1_493012_493942_+,NA|274aa|up_1|NZ_AP022849.1_493938_494760_-,NA|394aa|down_1|NZ_AP022849.1_500444_501626_+,NA|354aa|down_2|NZ_AP022849.1_501706_502768_+,NA|151aa|down_3|NZ_AP022849.1_502775_503228_+,NA|355aa|down_7|NZ_AP022849.1_505844_506909_-,NA|366aa|down_8|NZ_AP022849.1_506905_508003_-	NA|173aa|up_9|NZ_AP022849.1_488169_488688_-	NA	NA|164aa|up_8|NZ_AP022849.1_488780_489272_-	NA	NA|192aa|up_7|NZ_AP022849.1_489342_489918_-	pfam08805, PilS, PilS N terminal	NA|464aa|up_6|NZ_AP022849.1_490091_491483_-	TIGR00763, Lon_protease, endopeptidase La	NA|164aa|up_5|NZ_AP022849.1_491601_492093_-	NA	NA|128aa|up_4|NZ_AP022849.1_492043_492427_-	NA	NA|142aa|up_3|NZ_AP022849.1_492474_492900_-	NA	NA|310aa|up_2|NZ_AP022849.1_493012_493942_+	NA	NA|274aa|up_1|NZ_AP022849.1_493938_494760_-	NA	NA|230aa|up_0|NZ_AP022849.1_495332_496022_+	pfam09414, RNA_ligase, RNA ligase	cas9|1079aa|down_0|NZ_AP022849.1_496663_499900_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|394aa|down_1|NZ_AP022849.1_500444_501626_+	NA	NA|354aa|down_2|NZ_AP022849.1_501706_502768_+	NA	NA|151aa|down_3|NZ_AP022849.1_502775_503228_+	NA	NA|214aa|down_4|NZ_AP022849.1_503344_503986_+	pfam13462, Thioredoxin_4, Thioredoxin	NA|300aa|down_5|NZ_AP022849.1_503990_504890_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|244aa|down_6|NZ_AP022849.1_504996_505728_-	COG2968, COG2968, Uncharacterized conserved protein [Function unknown]	NA|355aa|down_7|NZ_AP022849.1_505844_506909_-	NA	NA|366aa|down_8|NZ_AP022849.1_506905_508003_-	NA	NA|309aa|down_9|NZ_AP022849.1_508121_509048_+	PRK08788, PRK08788, enoyl-CoA hydratase; Validated
GCF_011764485.1_ASM1176448v1	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	2	606372-606869	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas6e,csf3gr5,csf2gr7,DinG	c2c9_V-U4,cas9,DEDDh,cas6e,csf3gr5,csf2gr7,DinG	Type IV-A	CCTATGCCG-ACCCTTCTTTTGCGGTTGGCCGACAAC,CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC,CCTATGCCGACCCTTNNTTTTGNGGTTGGCCGACAACN	37,36,38	0	0	NA	NA	NA:NA:NA	4,5,7	7	TypeIV-A	csa3,DEDDh,WYL,cas3,c2c9_V-U4,cas9,cas6e,csf3gr5,csf2gr7,DinG	NA|398aa|up_8|NZ_AP022849.1_597765_598959_+,NA|58aa|up_7|NZ_AP022849.1_599218_599392_+,NA|84aa|up_6|NZ_AP022849.1_599400_599652_-,NA|287aa|up_4|NZ_AP022849.1_600705_601566_+,csf3gr5|263aa|up_2|NZ_AP022849.1_602227_603016_+,NA|77aa|down_0|NZ_AP022849.1_607500_607731_+,NA|162aa|down_2|NZ_AP022849.1_610580_611066_-,NA|236aa|down_7|NZ_AP022849.1_614140_614848_+,NA|127aa|down_8|NZ_AP022849.1_614844_615225_-,NA|288aa|down_9|NZ_AP022849.1_615555_616419_+	NA|691aa|up_9|NZ_AP022849.1_594953_597026_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|398aa|up_8|NZ_AP022849.1_597765_598959_+	NA	NA|58aa|up_7|NZ_AP022849.1_599218_599392_+	NA	NA|84aa|up_6|NZ_AP022849.1_599400_599652_-	NA	NA|273aa|up_5|NZ_AP022849.1_599648_600467_-	pfam01223, Endonuclease_NS, DNA/RNA non-specific endonuclease	NA|287aa|up_4|NZ_AP022849.1_600705_601566_+	NA	cas6e|215aa|up_3|NZ_AP022849.1_601586_602231_+	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	csf3gr5|263aa|up_2|NZ_AP022849.1_602227_603016_+	NA	csf2gr7|372aa|up_1|NZ_AP022849.1_603026_604142_+	cd09706, Csf2_U, CRISPR/Cas system-associated RAMP superfamily protein Csf2	DinG|738aa|up_0|NZ_AP022849.1_604147_606361_+	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|77aa|down_0|NZ_AP022849.1_607500_607731_+	NA	NA|473aa|down_1|NZ_AP022849.1_609149_610568_+	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|162aa|down_2|NZ_AP022849.1_610580_611066_-	NA	NA|165aa|down_3|NZ_AP022849.1_611067_611562_-	pfam15523, Ntox16, Novel toxin 16	NA|318aa|down_4|NZ_AP022849.1_611632_612586_-	cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain	NA|278aa|down_5|NZ_AP022849.1_612578_613412_-	cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophosphatase domain	NA|192aa|down_6|NZ_AP022849.1_613564_614140_+	PRK00228, PRK00228, YqgE/AlgH family protein	NA|236aa|down_7|NZ_AP022849.1_614140_614848_+	NA	NA|127aa|down_8|NZ_AP022849.1_614844_615225_-	NA	NA|288aa|down_9|NZ_AP022849.1_615555_616419_+	NA
GCF_011764485.1_ASM1176448v1	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	3	607215-607711	3,3,3,4	CRISPRCasFinder,CRT,PILER-CR,CRISPRCasFinder	no	cas6e,csf3gr5,csf2gr7,DinG	c2c9_V-U4,cas9,DEDDh,cas6e,csf3gr5,csf2gr7,DinG	Type IV-A	CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC,NCCTATGCCGACCCNTTCTTTTGGGGTTGGCCGACAA,ACAGCCCTATGCCGAACCCTTCTTTTGGGGTTGGCCGACAACGG,CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	36,37,44,36	0	0	NA	NA	NA:NA:NA:NA	5,7,2,5	7	TypeIV-A	csa3,DEDDh,WYL,cas3,c2c9_V-U4,cas9,cas6e,csf3gr5,csf2gr7,DinG	NA|398aa|up_8|NZ_AP022849.1_597765_598959_+,NA|58aa|up_7|NZ_AP022849.1_599218_599392_+,NA|84aa|up_6|NZ_AP022849.1_599400_599652_-,NA|287aa|up_4|NZ_AP022849.1_600705_601566_+,csf3gr5|263aa|up_2|NZ_AP022849.1_602227_603016_+,NA|162aa|down_1|NZ_AP022849.1_610580_611066_-,NA|236aa|down_6|NZ_AP022849.1_614140_614848_+,NA|127aa|down_7|NZ_AP022849.1_614844_615225_-,NA|288aa|down_8|NZ_AP022849.1_615555_616419_+	NA|691aa|up_9|NZ_AP022849.1_594953_597026_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|398aa|up_8|NZ_AP022849.1_597765_598959_+	NA	NA|58aa|up_7|NZ_AP022849.1_599218_599392_+	NA	NA|84aa|up_6|NZ_AP022849.1_599400_599652_-	NA	NA|273aa|up_5|NZ_AP022849.1_599648_600467_-	pfam01223, Endonuclease_NS, DNA/RNA non-specific endonuclease	NA|287aa|up_4|NZ_AP022849.1_600705_601566_+	NA	cas6e|215aa|up_3|NZ_AP022849.1_601586_602231_+	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	csf3gr5|263aa|up_2|NZ_AP022849.1_602227_603016_+	NA	csf2gr7|372aa|up_1|NZ_AP022849.1_603026_604142_+	cd09706, Csf2_U, CRISPR/Cas system-associated RAMP superfamily protein Csf2	DinG|738aa|up_0|NZ_AP022849.1_604147_606361_+	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|473aa|down_0|NZ_AP022849.1_609149_610568_+	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|162aa|down_1|NZ_AP022849.1_610580_611066_-	NA	NA|165aa|down_2|NZ_AP022849.1_611067_611562_-	pfam15523, Ntox16, Novel toxin 16	NA|318aa|down_3|NZ_AP022849.1_611632_612586_-	cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain	NA|278aa|down_4|NZ_AP022849.1_612578_613412_-	cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophosphatase domain	NA|192aa|down_5|NZ_AP022849.1_613564_614140_+	PRK00228, PRK00228, YqgE/AlgH family protein	NA|236aa|down_6|NZ_AP022849.1_614140_614848_+	NA	NA|127aa|down_7|NZ_AP022849.1_614844_615225_-	NA	NA|288aa|down_8|NZ_AP022849.1_615555_616419_+	NA	NA|277aa|down_9|NZ_AP022849.1_616455_617286_+	cd10446, GIY-YIG_unchar_1, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria
GCF_011764485.1_ASM1176448v1	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	4	607806-607906	5	CRISPRCasFinder	no	cas6e,csf3gr5,csf2gr7,DinG	c2c9_V-U4,cas9,DEDDh,cas6e,csf3gr5,csf2gr7,DinG	Type IV-A	CCTATGCCGACCCTTCTTTTGCGGTTGGCCGACAAC	36	0	0	NA	NA	NA	1	1	TypeIV-A	csa3,DEDDh,WYL,cas3,c2c9_V-U4,cas9,cas6e,csf3gr5,csf2gr7,DinG	NA|398aa|up_9|NZ_AP022849.1_597765_598959_+,NA|58aa|up_8|NZ_AP022849.1_599218_599392_+,NA|84aa|up_7|NZ_AP022849.1_599400_599652_-,NA|287aa|up_5|NZ_AP022849.1_600705_601566_+,csf3gr5|263aa|up_3|NZ_AP022849.1_602227_603016_+,NA|77aa|up_0|NZ_AP022849.1_607500_607731_+,NA|162aa|down_1|NZ_AP022849.1_610580_611066_-,NA|236aa|down_6|NZ_AP022849.1_614140_614848_+,NA|127aa|down_7|NZ_AP022849.1_614844_615225_-,NA|288aa|down_8|NZ_AP022849.1_615555_616419_+	NA|398aa|up_9|NZ_AP022849.1_597765_598959_+	NA	NA|58aa|up_8|NZ_AP022849.1_599218_599392_+	NA	NA|84aa|up_7|NZ_AP022849.1_599400_599652_-	NA	NA|273aa|up_6|NZ_AP022849.1_599648_600467_-	pfam01223, Endonuclease_NS, DNA/RNA non-specific endonuclease	NA|287aa|up_5|NZ_AP022849.1_600705_601566_+	NA	cas6e|215aa|up_4|NZ_AP022849.1_601586_602231_+	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	csf3gr5|263aa|up_3|NZ_AP022849.1_602227_603016_+	NA	csf2gr7|372aa|up_2|NZ_AP022849.1_603026_604142_+	cd09706, Csf2_U, CRISPR/Cas system-associated RAMP superfamily protein Csf2	DinG|738aa|up_1|NZ_AP022849.1_604147_606361_+	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|77aa|up_0|NZ_AP022849.1_607500_607731_+	NA	NA|473aa|down_0|NZ_AP022849.1_609149_610568_+	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|162aa|down_1|NZ_AP022849.1_610580_611066_-	NA	NA|165aa|down_2|NZ_AP022849.1_611067_611562_-	pfam15523, Ntox16, Novel toxin 16	NA|318aa|down_3|NZ_AP022849.1_611632_612586_-	cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain	NA|278aa|down_4|NZ_AP022849.1_612578_613412_-	cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophosphatase domain	NA|192aa|down_5|NZ_AP022849.1_613564_614140_+	PRK00228, PRK00228, YqgE/AlgH family protein	NA|236aa|down_6|NZ_AP022849.1_614140_614848_+	NA	NA|127aa|down_7|NZ_AP022849.1_614844_615225_-	NA	NA|288aa|down_8|NZ_AP022849.1_615555_616419_+	NA	NA|277aa|down_9|NZ_AP022849.1_616455_617286_+	cd10446, GIY-YIG_unchar_1, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria
GCF_011764485.1_ASM1176448v1	NZ_AP022848	Bosea sp. ANAM02	1	734242-734318	1	CRISPRCasFinder	no		csa3,DEDDh,WYL,cas3	Orphan	GTTCAGTTGGGCCGCGCCGCGTT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,cas3,c2c9_V-U4,cas9,cas6e,csf3gr5,csf2gr7,DinG	NA,NA	NA|405aa|up_9|NZ_AP022848.1_721222_722437_+	pfam04986, Y2_Tnp, Putative transposase	NA|280aa|up_8|NZ_AP022848.1_722937_723777_+	cd01004, PBP2_MidA_like, Mimosine binding domain of ABC-type transporter MidA and similar proteins; the type 2 periplasmic binding protein fold	NA|233aa|up_7|NZ_AP022848.1_723808_724507_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|221aa|up_6|NZ_AP022848.1_724542_725205_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|255aa|up_5|NZ_AP022848.1_725194_725959_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|389aa|up_4|NZ_AP022848.1_726046_727213_+	cd03316, MR_like, Mandelate racemase (MR)-like subfamily of the enolase superfamily	NA|290aa|up_3|NZ_AP022848.1_727472_728342_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|442aa|up_2|NZ_AP022848.1_728338_729664_+	PRK07483, PRK07483, aspartate aminotransferase family protein	NA|495aa|up_1|NZ_AP022848.1_729676_731161_+	COG5476, COG5476, Uncharacterized conserved protein [Function unknown]	NA|521aa|up_0|NZ_AP022848.1_731160_732723_+	cd08502, PBP2_NikA_DppA_OppA_like_16, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|267aa|down_0|NZ_AP022848.1_734431_735232_-	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases	NA|297aa|down_1|NZ_AP022848.1_737095_737986_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|442aa|down_2|NZ_AP022848.1_738224_739550_+	PRK07483, PRK07483, aspartate aminotransferase family protein	NA|490aa|down_3|NZ_AP022848.1_739557_741027_+	pfam07364, DUF1485, Metallopeptidase family M81	NA|527aa|down_4|NZ_AP022848.1_741070_742651_+	cd08502, PBP2_NikA_DppA_OppA_like_16, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|315aa|down_5|NZ_AP022848.1_742747_743692_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|291aa|down_6|NZ_AP022848.1_743688_744561_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|556aa|down_7|NZ_AP022848.1_744560_746228_+	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|291aa|down_8|NZ_AP022848.1_746224_747097_+	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes	NA|181aa|down_9|NZ_AP022848.1_747105_747648_+	pfam02627, CMD, Carboxymuconolactone decarboxylase family
