assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011466855.1_ASM1146685v1	NZ_CP045927	Staphylococcus agnetis strain 1379 chromosome, complete genome	1	21-175	1	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,WYL,cas2,cas1,cas9	Orphan	TCGGAAGCTTCCTCTTCATCCTCTTCTTTTGAGTCCTC	38	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,WYL,cas2,cas1,cas9	NA,NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|284aa|down_0|NZ_CP045927.1_780_1632_-	PRK05306, infB, translation initiation factor IF-2; Validated	NA|138aa|down_1|NZ_CP045927.1_1600_2014_-	pfam00741, Gas_vesicle, Gas vesicle protein	NA|94aa|down_2|NZ_CP045927.1_2039_2321_-	pfam05121, GvpK, Gas vesicle protein K	NA|102aa|down_3|NZ_CP045927.1_2268_2574_-	pfam00741, Gas_vesicle, Gas vesicle protein	NA|270aa|down_4|NZ_CP045927.1_2592_3402_-	pfam06386, GvpL_GvpF, Gas vesicle synthesis protein GvpL/GvpF	NA|85aa|down_5|NZ_CP045927.1_3403_3658_-	pfam05120, GvpG, Gas vesicle protein G	NA|256aa|down_6|NZ_CP045927.1_3657_4425_-	pfam06386, GvpL_GvpF, Gas vesicle synthesis protein GvpL/GvpF	NA|99aa|down_7|NZ_CP045927.1_4523_4820_-	pfam05800, GvpO, Gas vesicle synthesis protein GvpO	NA|116aa|down_8|NZ_CP045927.1_4886_5234_-	PRK09371, PRK09371, gas vesicle structural protein GvpA	NA|163aa|down_9|NZ_CP045927.1_5325_5814_-	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed
GCF_011466855.1_ASM1146685v1	NZ_CP045927	Staphylococcus agnetis strain 1379 chromosome, complete genome	2	1451424-1451531	2	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,WYL,cas2,cas1,cas9	Orphan	GCGGGTGATGGGAATCGAACCCAC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,WYL,cas2,cas1,cas9	NA|59aa|up_9|NZ_CP045927.1_1445972_1446149_-,NA|78aa|up_6|NZ_CP045927.1_1446681_1446915_-,NA	NA|59aa|up_9|NZ_CP045927.1_1445972_1446149_-	NA	NA|71aa|up_8|NZ_CP045927.1_1446142_1446355_-	pfam01122, Cobalamin_bind, Eukaryotic cobalamin-binding protein	NA|54aa|up_7|NZ_CP045927.1_1446503_1446665_+	pfam09538, FYDLN_acid, Protein of unknown function (FYDLN_acid)	NA|78aa|up_6|NZ_CP045927.1_1446681_1446915_-	NA	NA|256aa|up_5|NZ_CP045927.1_1446927_1447695_-	pfam03374, ANT, Phage antirepressor protein KilAC domain	NA|81aa|up_4|NZ_CP045927.1_1447707_1447950_-	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|111aa|up_3|NZ_CP045927.1_1448124_1448457_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|155aa|up_2|NZ_CP045927.1_1448471_1448936_+	pfam06114, Peptidase_M78, IrrE N-terminal-like domain	NA|336aa|up_1|NZ_CP045927.1_1448950_1449958_+	pfam11611, DUF4352, Domain of unknown function (DUF4352)	NA|350aa|up_0|NZ_CP045927.1_1450022_1451072_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|185aa|down_0|NZ_CP045927.1_1452174_1452729_-	COG3545, COG3545, Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]	NA|468aa|down_1|NZ_CP045927.1_1452811_1454215_-	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed	NA|308aa|down_2|NZ_CP045927.1_1454228_1455152_-	PRK12435, PRK12435, ferrochelatase; Provisional	NA|348aa|down_3|NZ_CP045927.1_1455174_1456218_-	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|177aa|down_4|NZ_CP045927.1_1456414_1456945_+	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only]	NA|405aa|down_5|NZ_CP045927.1_1456992_1458207_-	pfam05975, EcsB, Bacterial ABC transporter protein EcsB	NA|246aa|down_6|NZ_CP045927.1_1458203_1458941_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|143aa|down_7|NZ_CP045927.1_1459071_1459500_+	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only]	NA|119aa|down_8|NZ_CP045927.1_1459579_1459936_+	COG4980, GvpP, Gas vesicle protein [General function prediction only]	NA|177aa|down_9|NZ_CP045927.1_1460035_1460566_+	PRK13777, PRK13777, HTH-type transcriptional regulator Hpr
GCF_011466855.1_ASM1146685v1	NZ_CP045927	Staphylococcus agnetis strain 1379 chromosome, complete genome	3	2260135-2260631	3,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas9	cas3,DEDDh,csa3,DinG,WYL,cas2,cas1,cas9	Type II-A,Type II-C, Type II-B, or Type II-C?,Type II-B	GTTTCACTTATACCTAAAATTACAGAGTACTAAAAC,GTTTCACTTATACCTAAAATTACAGAGTACTAAAAC,GTTTCACTTATACCTAAAATTACAGAGTACTAAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	7,7,6	7	TypeII-A,TypeII-C,TypeII-B,orTypeII-C?,TypeII-B	cas3,DEDDh,csa3,DinG,WYL,cas2,cas1,cas9	NA|334aa|up_4|NZ_CP045927.1_2254423_2255425_-,NA|51aa|up_1|NZ_CP045927.1_2256653_2256806_-,NA|46aa|down_1|NZ_CP045927.1_2261345_2261483_-,NA|107aa|down_5|NZ_CP045927.1_2267250_2267571_+	NA|450aa|up_9|NZ_CP045927.1_2247903_2249253_-	TIGR00508, hypothetical_protein_DESPIG_00326, adenosylmethionine-8-amino-7-oxononanoate transaminase	NA|231aa|up_8|NZ_CP045927.1_2249227_2249920_-	COG0132, BioD, Dethiobiotin synthetase [Coenzyme metabolism]	NA|147aa|up_7|NZ_CP045927.1_2250133_2250574_+	smart00850, LytTR, LytTr DNA-binding domain	NA|153aa|up_6|NZ_CP045927.1_2250570_2251029_+	pfam11457, DUF3021, Protein of unknown function (DUF3021)	NA|441aa|up_5|NZ_CP045927.1_2253019_2254342_+	PRK00701, PRK00701, divalent metal cation transporter MntH	NA|334aa|up_4|NZ_CP045927.1_2254423_2255425_-	NA	cas2|103aa|up_3|NZ_CP045927.1_2255438_2255747_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|301aa|up_2|NZ_CP045927.1_2255751_2256654_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	NA|51aa|up_1|NZ_CP045927.1_2256653_2256806_-	NA	cas9|995aa|up_0|NZ_CP045927.1_2256835_2259820_-	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	NA|141aa|down_0|NZ_CP045927.1_2260854_2261277_+	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18	NA|46aa|down_1|NZ_CP045927.1_2261345_2261483_-	NA	NA|554aa|down_2|NZ_CP045927.1_2261664_2263326_+	PRK12834, PRK12834, putative FAD-binding dehydrogenase; Reviewed	NA|530aa|down_3|NZ_CP045927.1_2263749_2265339_-	cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM)	NA|342aa|down_4|NZ_CP045927.1_2265845_2266871_-	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated	NA|107aa|down_5|NZ_CP045927.1_2267250_2267571_+	NA	NA|209aa|down_6|NZ_CP045927.1_2267802_2268429_+	PRK00170, PRK00170, azoreductase; Reviewed	NA|608aa|down_7|NZ_CP045927.1_2268791_2270615_-	pfam02687, FtsX, FtsX-like permease family	NA|250aa|down_8|NZ_CP045927.1_2270616_2271366_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|286aa|down_9|NZ_CP045927.1_2271455_2272313_-	cd16948, HATPase_BceS-YxdK-YvcQ-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis BceS, YxdK, and Bacillus thuringiensis YvcQ
