assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011466835.1_ASM1146683v1	NZ_CP045916	Pseudomonas aeruginosa strain CF39S chromosome, complete genome	1	347858-347971	1	CRISPRCasFinder	no		csa3,DEDDh,cas3,WYL,PD-DExK,DinG,TnsE_C	Orphan	GGCCAAAGAACTGGAGGGCAAGGTATGA	28	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL,PD-DExK,DinG,TnsE_C	NA,NA|168aa|down_2|NZ_CP045916.1_352543_353047_-,NA|251aa|down_5|NZ_CP045916.1_354800_355553_-,NA|185aa|down_7|NZ_CP045916.1_356321_356876_-	NA|293aa|up_9|NZ_CP045916.1_334706_335585_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|222aa|up_8|NZ_CP045916.1_335747_336413_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|354aa|up_7|NZ_CP045916.1_336473_337535_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|459aa|up_6|NZ_CP045916.1_337790_339167_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|up_5|NZ_CP045916.1_339445_340198_+	pfam07722, Peptidase_C26, Peptidase C26	NA|453aa|up_4|NZ_CP045916.1_340238_341597_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|457aa|up_3|NZ_CP045916.1_341662_343033_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|368aa|up_2|NZ_CP045916.1_343148_344252_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|366aa|up_1|NZ_CP045916.1_344670_345768_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|up_0|NZ_CP045916.1_345822_346977_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|796aa|down_0|NZ_CP045916.1_349014_351402_-	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|351aa|down_1|NZ_CP045916.1_351512_352565_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|168aa|down_2|NZ_CP045916.1_352543_353047_-	NA	NA|204aa|down_3|NZ_CP045916.1_353151_353763_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|340aa|down_4|NZ_CP045916.1_353761_354781_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|251aa|down_5|NZ_CP045916.1_354800_355553_-	NA	NA|233aa|down_6|NZ_CP045916.1_355601_356300_+	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|185aa|down_7|NZ_CP045916.1_356321_356876_-	NA	NA|165aa|down_8|NZ_CP045916.1_357141_357636_+	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]	NA|231aa|down_9|NZ_CP045916.1_357638_358331_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]
GCF_011466835.1_ASM1146683v1	NZ_CP045916	Pseudomonas aeruginosa strain CF39S chromosome, complete genome	2	1522274-1523081	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no		csa3,DEDDh,cas3,WYL,PD-DExK,DinG,TnsE_C	Orphan	GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA	28,28,28	3	3	1522482-1522513|1522962-1522993|1523022-1523053	NZ_CP045916.1_5104727-5104758|NZ_CP045916.1_913740-913771|NZ_CP045916.1_901810-901841	I-F:I-F:I-F	13,13,13	13	Orphan	csa3,DEDDh,cas3,WYL,PD-DExK,DinG,TnsE_C	NA|105aa|up_0|NZ_CP045916.1_1521688_1522003_+,NA|32aa|down_0|NZ_CP045916.1_1523401_1523497_+,NA|141aa|down_1|NZ_CP045916.1_1523877_1524300_-,NA|59aa|down_6|NZ_CP045916.1_1527477_1527654_-	NA|329aa|up_9|NZ_CP045916.1_1511409_1512396_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|110aa|up_8|NZ_CP045916.1_1512412_1512742_-	pfam06942, GlpM, GlpM protein	NA|513aa|up_7|NZ_CP045916.1_1512874_1514413_-	PRK12266, glpD, glycerol-3-phosphate dehydrogenase; Reviewed	NA|252aa|up_6|NZ_CP045916.1_1514690_1515446_-	PRK10906, PRK10906, DeoR/GlpR family transcriptional regulator	NA|506aa|up_5|NZ_CP045916.1_1515651_1517169_-	PRK00047, glpK, glycerol kinase GlpK	NA|280aa|up_4|NZ_CP045916.1_1517208_1518048_-	cd00333, MIP, Major intrinsic protein (MIP) superfamily	NA|157aa|up_3|NZ_CP045916.1_1518312_1518783_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|495aa|up_2|NZ_CP045916.1_1518846_1520331_+	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases	NA|262aa|up_1|NZ_CP045916.1_1520526_1521312_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|105aa|up_0|NZ_CP045916.1_1521688_1522003_+	NA	NA|32aa|down_0|NZ_CP045916.1_1523401_1523497_+	NA	NA|141aa|down_1|NZ_CP045916.1_1523877_1524300_-	NA	NA|177aa|down_2|NZ_CP045916.1_1524398_1524929_-	COG3038, CybB, Cytochrome B561 [Energy production and conversion]	NA|66aa|down_3|NZ_CP045916.1_1525111_1525309_+	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|213aa|down_4|NZ_CP045916.1_1525287_1525926_-	PRK09975, PRK09975, DNA-binding transcriptional regulator EnvR; Provisional	NA|393aa|down_5|NZ_CP045916.1_1526291_1527470_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|59aa|down_6|NZ_CP045916.1_1527477_1527654_-	NA	NA|308aa|down_7|NZ_CP045916.1_1527780_1528704_-	cd06986, cupin_MmsR-like_N, AraC/XylS family transcriptional regulators similar to MmsR, N-terminal cupin domain	NA|498aa|down_8|NZ_CP045916.1_1528835_1530329_+	TIGR01722, Methylmalonate-semialdehyde_dehydrogenase, methylmalonic acid semialdehyde dehydrogenase	NA|299aa|down_9|NZ_CP045916.1_1530344_1531241_+	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase
GCF_011466835.1_ASM1146683v1	NZ_CP045916	Pseudomonas aeruginosa strain CF39S chromosome, complete genome	3	1897687-1897788	3	CRISPRCasFinder	no	DEDDh	csa3,DEDDh,cas3,WYL,PD-DExK,DinG,TnsE_C	Unclear	GCGGCGGGTATCGGCGGATAACGCC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL,PD-DExK,DinG,TnsE_C	NA|454aa|up_7|NZ_CP045916.1_1889812_1891174_-,NA|106aa|down_6|NZ_CP045916.1_1904031_1904349_+	NA|286aa|up_9|NZ_CP045916.1_1888008_1888866_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|268aa|up_8|NZ_CP045916.1_1889005_1889809_-	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane]	NA|454aa|up_7|NZ_CP045916.1_1889812_1891174_-	NA	NA|74aa|up_6|NZ_CP045916.1_1891316_1891538_-	COG3205, COG3205, Predicted membrane protein [Function unknown]	NA|286aa|up_5|NZ_CP045916.1_1891831_1892689_+	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold	NA|104aa|up_4|NZ_CP045916.1_1892906_1893218_+	COG3162, COG3162, Predicted membrane protein [Function unknown]	NA|552aa|up_3|NZ_CP045916.1_1893214_1894870_+	PRK09395, actP, cation/acetate symporter ActP	NA|600aa|up_2|NZ_CP045916.1_1894959_1896759_+	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	DEDDh|209aa|up_1|NZ_CP045916.1_1896755_1897382_+	PRK09145, PRK09145, 3'-5' exonuclease	NA|53aa|up_0|NZ_CP045916.1_1897490_1897649_+	pfam11752, DUF3309, Protein of unknown function (DUF3309)	NA|375aa|down_0|NZ_CP045916.1_1897923_1899048_+	COG3146, COG3146, Uncharacterized protein conserved in bacteria [Function unknown]	NA|89aa|down_1|NZ_CP045916.1_1899080_1899347_-	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|611aa|down_2|NZ_CP045916.1_1899628_1901461_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|188aa|down_3|NZ_CP045916.1_1901523_1902087_-	PRK10903, PRK10903, peptidylprolyl isomerase A	NA|276aa|down_4|NZ_CP045916.1_1902068_1902896_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|310aa|down_5|NZ_CP045916.1_1902902_1903832_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|106aa|down_6|NZ_CP045916.1_1904031_1904349_+	NA	NA|214aa|down_7|NZ_CP045916.1_1904495_1905137_+	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism]	NA|300aa|down_8|NZ_CP045916.1_1905241_1906141_-	pfam00892, EamA, EamA-like transporter family	NA|112aa|down_9|NZ_CP045916.1_1906150_1906486_-	PRK10089, PRK10089, chaperone CsaA
GCF_011466835.1_ASM1146683v1	NZ_CP045917	Pseudomonas aeruginosa strain CF39S plasmid pCF39S, complete sequence	1	29939-30029	1	CRISPRCasFinder	no		DEDDh	Orphan	TTCCCGGTTTAGCATGCGAAACTGG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL,PD-DExK,DinG,TnsE_C	NA|267aa|up_9|NZ_CP045917.1_18402_19203_+,NA|118aa|up_6|NZ_CP045917.1_22069_22423_+,NA|154aa|up_5|NZ_CP045917.1_22389_22851_-,NA|182aa|up_4|NZ_CP045917.1_22969_23515_+,NA|101aa|up_2|NZ_CP045917.1_24623_24926_+,NA|214aa|down_4|NZ_CP045917.1_36558_37200_+,NA|46aa|down_9|NZ_CP045917.1_42568_42706_+	NA|267aa|up_9|NZ_CP045917.1_18402_19203_+	NA	NA|369aa|up_8|NZ_CP045917.1_19373_20480_+	cd00140, beta_clamp, Beta clamp domain	NA|523aa|up_7|NZ_CP045917.1_20504_22073_+	COG0568, RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription]	NA|118aa|up_6|NZ_CP045917.1_22069_22423_+	NA	NA|154aa|up_5|NZ_CP045917.1_22389_22851_-	NA	NA|182aa|up_4|NZ_CP045917.1_22969_23515_+	NA	NA|321aa|up_3|NZ_CP045917.1_23598_24561_+	pfam06834, TraU, TraU protein	NA|101aa|up_2|NZ_CP045917.1_24623_24926_+	NA	NA|346aa|up_1|NZ_CP045917.1_24963_26001_+	PRK09354, recA, recombinase A; Provisional	NA|311aa|up_0|NZ_CP045917.1_26046_26979_-	pfam01339, CheB_methylest, CheB methylesterase	NA|264aa|down_0|NZ_CP045917.1_32743_33535_-	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]	NA|675aa|down_1|NZ_CP045917.1_33531_35556_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|163aa|down_2|NZ_CP045917.1_35552_36041_-	smart00260, CheW, Two component signalling adaptor domain	NA|129aa|down_3|NZ_CP045917.1_36030_36417_-	pfam00072, Response_reg, Response regulator receiver domain	NA|214aa|down_4|NZ_CP045917.1_36558_37200_+	NA	NA|287aa|down_5|NZ_CP045917.1_37261_38122_+	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|481aa|down_6|NZ_CP045917.1_38241_39684_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|300aa|down_7|NZ_CP045917.1_39858_40758_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|400aa|down_8|NZ_CP045917.1_40757_41957_+	TIGR00180, Probable_chromosome-partitioning_protein_ParB, ParB/RepB/Spo0J family partition protein	NA|46aa|down_9|NZ_CP045917.1_42568_42706_+	NA
