assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011455275.1_ASM1145527v1	NZ_CP015028	Pasteurellaceae bacterium Orientalotternb1 chromosome, complete genome	1	471776-472011	1,1,1	PILER-CR,CRT,CRISPRCasFinder	no		PD-DExK,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,cas9	Orphan	TGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT,NTGTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT,GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	37,38,36	0	0	NA	NA	NA:NA:NA	3,3,3	3	Orphan	PD-DExK,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,cas9	NA,NA|342aa|down_0|NZ_CP015028.1_472066_473092_-,NA|154aa|down_1|NZ_CP015028.1_473136_473598_-	NA|233aa|up_9|NZ_CP015028.1_456723_457422_+	COG4795, PulJ, Type II secretory pathway, component PulJ [Intracellular trafficking and secretion]	NA|223aa|up_8|NZ_CP015028.1_457425_458094_+	pfam10833, DUF2572, Protein of unknown function (DUF2572)	NA|99aa|up_7|NZ_CP015028.1_458077_458374_+	pfam17344, DUF5374, Family of unknown function (DUF5374)	NA|1086aa|up_6|NZ_CP015028.1_458424_461682_+	pfam04257, Exonuc_V_gamma, Exodeoxyribonuclease V, gamma subunit	NA|982aa|up_5|NZ_CP015028.1_461678_464624_+	PRK15101, PRK15101, protease3; Provisional	NA|210aa|up_4|NZ_CP015028.1_464746_465376_-	PRK11570, PRK11570, peptidyl-prolyl cis-trans isomerase; Provisional	NA|286aa|up_3|NZ_CP015028.1_465516_466374_+	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated	NA|654aa|up_2|NZ_CP015028.1_466456_468418_-	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|552aa|up_1|NZ_CP015028.1_468672_470328_+	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|130aa|up_0|NZ_CP015028.1_470841_471231_+	pfam18798, LPD3, Large polyvalent protein-associated domain 3	NA|342aa|down_0|NZ_CP015028.1_472066_473092_-	NA	NA|154aa|down_1|NZ_CP015028.1_473136_473598_-	NA	NA|253aa|down_2|NZ_CP015028.1_473730_474489_+	pfam09992, NAGPA, Phosphodiester glycosidase	NA|364aa|down_3|NZ_CP015028.1_474937_476029_-	PRK05031, PRK05031, tRNA (uracil-5-)-methyltransferase; Validated	NA|110aa|down_4|NZ_CP015028.1_476080_476410_-	PRK11027, PRK11027, hypothetical protein; Provisional	NA|1299aa|down_5|NZ_CP015028.1_476655_480552_+	PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional	NA|183aa|down_6|NZ_CP015028.1_480818_481367_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|324aa|down_7|NZ_CP015028.1_481587_482559_-	PRK11085, PRK11085, magnesium/cobalt transporter CorA	NA|316aa|down_8|NZ_CP015028.1_482857_483805_+	pfam08794, Lipoprot_C, Lipoprotein GNA1870 C terminal like	NA|263aa|down_9|NZ_CP015028.1_483919_484708_+	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
GCF_011455275.1_ASM1145527v1	NZ_CP015028	Pasteurellaceae bacterium Orientalotternb1 chromosome, complete genome	2	2156018-2157120	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c	PD-DExK,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,cas9	 Type I-U?,Type I-C,Type I-U	GTTTAAACACACAGCCACATGTAGGTGGCTGG,GTTTAAACACACAGCCACATGTAGGTGGCTGG,GTTTAAACACACAGCCACATGTAGGTGGCTGG	32,32,32	4	4	2156184-2156217|2157054-2157088|2156186-2156219|2157056-2157090	NZ_CP015028.1_1582498-1582465|NZ_CP015028.1_88813-88847|NZ_CP015028.1_1582498-1582465|NZ_CP015028.1_88813-88847	NA:NA:NA	16,16,16	16	TypeI-U?,TypeI-C,TypeI-U	PD-DExK,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,cas9	NA,NA|122aa|down_7|NZ_CP015028.1_2163538_2163904_-,NA|167aa|down_8|NZ_CP015028.1_2163885_2164386_-,NA|127aa|down_9|NZ_CP015028.1_2164505_2164886_-	NA|430aa|up_9|NZ_CP015028.1_2147681_2148971_-	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional	NA|439aa|up_8|NZ_CP015028.1_2148990_2150307_-	pfam13173, AAA_14, AAA domain	NA|182aa|up_7|NZ_CP015028.1_2150434_2150980_-	PRK01736, PRK01736, hypothetical protein; Reviewed	NA|110aa|up_6|NZ_CP015028.1_2151054_2151384_+	COG3027, zapA, Cell division protein ZapA (stimulator of FtsZ polymerization and Z-ring component) [Cell cycle control, cell division,    chromosome partitioning]	NA|191aa|up_5|NZ_CP015028.1_2151620_2152193_+	TIGR02727, Uncharacterized_protein_YqgN, 5,10-methenyltetrahydrofolate synthetase	NA|149aa|up_4|NZ_CP015028.1_2152192_2152639_+	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|123aa|up_3|NZ_CP015028.1_2152726_2153095_+	PRK10687, PRK10687, purine nucleoside phosphoramidase; Provisional	NA|122aa|up_2|NZ_CP015028.1_2153096_2153462_+	cd09030, DUF1425, Putative periplasmic lipoprotein	NA|256aa|up_1|NZ_CP015028.1_2153611_2154379_+	cd05151, ChoK-like, Choline Kinase and similar proteins	NA|398aa|up_0|NZ_CP015028.1_2154593_2155787_+	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	cas2|98aa|down_0|NZ_CP015028.1_2157312_2157606_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|338aa|down_1|NZ_CP015028.1_2157663_2158677_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|204aa|down_2|NZ_CP015028.1_2159234_2159846_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas7|281aa|down_3|NZ_CP015028.1_2159909_2160752_-	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas8c|623aa|down_4|NZ_CP015028.1_2160772_2162641_-	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	NA|115aa|down_5|NZ_CP015028.1_2162808_2163153_-	pfam08765, Mor, Mor transcription activator family	NA|134aa|down_6|NZ_CP015028.1_2163149_2163551_-	pfam06252, DUF1018, Protein of unknown function (DUF1018)	NA|122aa|down_7|NZ_CP015028.1_2163538_2163904_-	NA	NA|167aa|down_8|NZ_CP015028.1_2163885_2164386_-	NA	NA|127aa|down_9|NZ_CP015028.1_2164505_2164886_-	NA
GCF_011455275.1_ASM1145527v1	NZ_CP015028	Pasteurellaceae bacterium Orientalotternb1 chromosome, complete genome	3	2202891-2202993	3	CRISPRCasFinder	no	cas5,cas3	PD-DExK,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,cas9	Unclear	AACATATCCCTGACATAAATCGATTGCGTCAGCAACT	37	1	1	2202928-2202956	NZ_CP015028.1_1226385-1226413	NA	1	1	Unclear	PD-DExK,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,cas9	NA|323aa|up_9|NZ_CP015028.1_2193991_2194960_+,NA|575aa|up_8|NZ_CP015028.1_2194963_2196688_+,NA|83aa|up_6|NZ_CP015028.1_2197545_2197794_+,NA|68aa|up_5|NZ_CP015028.1_2197802_2198006_+,NA	NA|323aa|up_9|NZ_CP015028.1_2193991_2194960_+	NA	NA|575aa|up_8|NZ_CP015028.1_2194963_2196688_+	NA	NA|268aa|up_7|NZ_CP015028.1_2196687_2197491_+	TIGR02218, conserved_hypothetical_protein, phage conserved hypothetical protein BR0599	NA|83aa|up_6|NZ_CP015028.1_2197545_2197794_+	NA	NA|68aa|up_5|NZ_CP015028.1_2197802_2198006_+	NA	NA|933aa|up_4|NZ_CP015028.1_2198005_2200804_+	pfam13550, Phage-tail_3, Putative phage tail protein	NA|91aa|up_3|NZ_CP015028.1_2200811_2201084_+	pfam13876, Phage_gp49_66, Phage protein (N4 Gp49/phage Sf6 gene 66) family	NA|37aa|up_2|NZ_CP015028.1_2201224_2201335_+	COG4416, Com, Mu-like prophage protein Com [General function prediction only]	NA|247aa|up_1|NZ_CP015028.1_2201396_2202137_+	cd00315, Cyt_C5_DNA_methylase, Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology	NA|37aa|up_0|NZ_CP015028.1_2202497_2202608_+	COG4416, Com, Mu-like prophage protein Com [General function prediction only]	NA|63aa|down_0|NZ_CP015028.1_2203640_2203829_-	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas5|241aa|down_1|NZ_CP015028.1_2203834_2204557_-	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|822aa|down_2|NZ_CP015028.1_2204565_2207031_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|563aa|down_3|NZ_CP015028.1_2207239_2208928_-	COG4961, TadG, Flp pilus assembly protein TadG [Intracellular trafficking and secretion]	NA|203aa|down_4|NZ_CP015028.1_2208946_2209555_-	pfam16964, TadF, Putative tight adherence pilin protein F	NA|187aa|down_5|NZ_CP015028.1_2209526_2210087_-	pfam07811, TadE, TadE-like protein	NA|250aa|down_6|NZ_CP015028.1_2210101_2210851_-	COG5010, TadD, Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion]	NA|284aa|down_7|NZ_CP015028.1_2210840_2211692_-	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|296aa|down_8|NZ_CP015028.1_2211691_2212579_-	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion]	NA|426aa|down_9|NZ_CP015028.1_2212580_2213858_-	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion]
GCF_011455275.1_ASM1145527v1	NZ_CP015028	Pasteurellaceae bacterium Orientalotternb1 chromosome, complete genome	4	2335413-2341190	4,3,3,4,5	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR	no	cas9,cas1,cas2	PD-DExK,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,cas9	 or Type II-C?, Type II-B,Type II-A,Type II-C,Type II-B	ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC,ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC,GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT,GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT,GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	36,36,36,36,36	0	0	NA	NA	NA:NA:NA:NA:NA	87,87,82,82,82	87	orTypeII-C?,TypeII-B,TypeII-A,TypeII-C,TypeII-B	PD-DExK,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,cas9	NA,NA|81aa|down_0|NZ_CP015028.1_2341526_2341769_-,NA|201aa|down_1|NZ_CP015028.1_2341823_2342426_-	NA|188aa|up_9|NZ_CP015028.1_2322506_2323070_+	pfam17311, DUF5358, Family of unknown function (DUF5358)	NA|794aa|up_8|NZ_CP015028.1_2323174_2325556_+	TIGR02071, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1B	NA|591aa|up_7|NZ_CP015028.1_2325758_2327531_+	COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]	NA|342aa|up_6|NZ_CP015028.1_2327574_2328600_-	PRK09283, PRK09283, porphobilinogen synthase	NA|249aa|up_5|NZ_CP015028.1_2328836_2329583_-	PRK10921, PRK10921, Sec-independent protein translocase subunit TatC	NA|189aa|up_4|NZ_CP015028.1_2329572_2330139_-	PRK01770, PRK01770, Sec-independent protein translocase subunit TatB	NA|75aa|up_3|NZ_CP015028.1_2330142_2330367_-	PRK01833, tatA, Sec-independent protein translocase subunit TatA	cas9|1054aa|up_2|NZ_CP015028.1_2330694_2333856_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|305aa|up_1|NZ_CP015028.1_2333910_2334825_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|109aa|up_0|NZ_CP015028.1_2334817_2335144_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|81aa|down_0|NZ_CP015028.1_2341526_2341769_-	NA	NA|201aa|down_1|NZ_CP015028.1_2341823_2342426_-	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
