assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011405515.1_ASM1140551v1	NZ_AP022671	Nitrospira sp. KM1	1	807736-807867	1	CRISPRCasFinder	no		WYL,csa3,csx1,cas3	Orphan	CAGCTCCTGCATACGCTGTTTCGCCTCATGAAGCTCTTCGGAGGCGCG	48	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,csx1,cas3	NA|174aa|up_2|NZ_AP022671.1_802867_803389_-,NA|314aa|up_0|NZ_AP022671.1_805977_806919_-,NA	NA|123aa|up_9|NZ_AP022671.1_796766_797135_+	pfam07238, PilZ, PilZ domain	NA|72aa|up_8|NZ_AP022671.1_797237_797453_-	pfam00313, CSD, 'Cold-shock' DNA-binding domain	NA|364aa|up_7|NZ_AP022671.1_797749_798841_+	pfam03739, YjgP_YjgQ, Predicted permease YjgP/YjgQ family	NA|364aa|up_6|NZ_AP022671.1_798912_800004_+	TIGR04408, LptG_lptG, LPS export ABC transporter permease LptG	NA|419aa|up_5|NZ_AP022671.1_800161_801418_+	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II	NA|103aa|up_4|NZ_AP022671.1_801427_801736_+	COG0236, AcpP, Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|373aa|up_3|NZ_AP022671.1_801738_802857_+	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional	NA|174aa|up_2|NZ_AP022671.1_802867_803389_-	NA	NA|715aa|up_1|NZ_AP022671.1_803733_805878_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|314aa|up_0|NZ_AP022671.1_805977_806919_-	NA	NA|150aa|down_0|NZ_AP022671.1_808545_808995_-	pfam01584, CheW, CheW-like domain	NA|159aa|down_1|NZ_AP022671.1_809022_809499_-	pfam01584, CheW, CheW-like domain	NA|1142aa|down_2|NZ_AP022671.1_809555_812981_-	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]	NA|625aa|down_3|NZ_AP022671.1_813017_814892_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|179aa|down_4|NZ_AP022671.1_814948_815485_-	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]	NA|121aa|down_5|NZ_AP022671.1_815489_815852_-	cd17618, REC_OmpR_PhoB, phosphoacceptor receiver (REC) domain of PhoB response regulator from the OmpR family	NA|246aa|down_6|NZ_AP022671.1_815904_816642_-	pfam11845, DUF3365, Protein of unknown function (DUF3365)	NA|254aa|down_7|NZ_AP022671.1_817052_817814_-	pfam01955, CbiZ, Adenosylcobinamide amidohydrolase	NA|374aa|down_8|NZ_AP022671.1_817806_818928_-	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase	NA|320aa|down_9|NZ_AP022671.1_818912_819872_-	pfam03186, CobD_Cbib, CobD/Cbib protein
GCF_011405515.1_ASM1140551v1	NZ_AP022671	Nitrospira sp. KM1	2	1215463-1215580	2	CRISPRCasFinder	no		WYL,csa3,csx1,cas3	Orphan	TCGGCATCAACGAGCGCTGCCGCGACGGTGCAGATGC	37	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,csx1,cas3	NA|120aa|up_9|NZ_AP022671.1_1203600_1203960_+,NA|274aa|down_0|NZ_AP022671.1_1216322_1217144_+,NA|129aa|down_2|NZ_AP022671.1_1222587_1222974_+,NA|122aa|down_4|NZ_AP022671.1_1225233_1225599_+,NA|66aa|down_6|NZ_AP022671.1_1226700_1226898_-	NA|120aa|up_9|NZ_AP022671.1_1203600_1203960_+	NA	NA|289aa|up_8|NZ_AP022671.1_1204302_1205169_+	pfam01226, Form_Nir_trans, Formate/nitrite transporter	NA|531aa|up_7|NZ_AP022671.1_1205190_1206783_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|488aa|up_6|NZ_AP022671.1_1206812_1208276_+	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|498aa|up_5|NZ_AP022671.1_1208280_1209774_+	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA|106aa|up_4|NZ_AP022671.1_1209859_1210177_-	cd06122, cupin_TTHA0104, Thermus thermophilus TTHA0104 and related proteins, cupin domain	NA|571aa|up_3|NZ_AP022671.1_1210320_1212033_+	sd00006, TPR, Tetratricopeptide repeat	NA|119aa|up_2|NZ_AP022671.1_1212074_1212431_-	pfam07238, PilZ, PilZ domain	NA|484aa|up_1|NZ_AP022671.1_1212589_1214041_-	pfam01139, RtcB, tRNA-splicing ligase RtcB	NA|73aa|up_0|NZ_AP022671.1_1214405_1214624_+	cd05603, STKc_SGK2, Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2	NA|274aa|down_0|NZ_AP022671.1_1216322_1217144_+	NA	NA|1798aa|down_1|NZ_AP022671.1_1217140_1222534_+	COG3209, RhsA, Rhs family protein [Cell envelope biogenesis, outer membrane]	NA|129aa|down_2|NZ_AP022671.1_1222587_1222974_+	NA	NA|517aa|down_3|NZ_AP022671.1_1223014_1224565_+	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|122aa|down_4|NZ_AP022671.1_1225233_1225599_+	NA	NA|279aa|down_5|NZ_AP022671.1_1225550_1226387_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|66aa|down_6|NZ_AP022671.1_1226700_1226898_-	NA	NA|172aa|down_7|NZ_AP022671.1_1226992_1227508_-	pfam01951, Archease, Archease protein family (MTH1598/TM1083)	NA|522aa|down_8|NZ_AP022671.1_1227682_1229248_+	pfam05359, DUF748, Domain of Unknown Function (DUF748)	NA|381aa|down_9|NZ_AP022671.1_1229261_1230404_-	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
