The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	89349	151065	4910425	transposase,protease,tRNA	Staphylococcus_phage(28.57%)	55	NA	NA
WP_165564246.1|89349_90183_-|protease	rhomboid family intramembrane serine protease GlpG	protease	NA	NA	NA	NA
WP_025888989.1|90186_90489_-	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA	NA
WP_165564247.1|90567_91593_-	L-threonine 3-dehydrogenase	NA	R9TPW0	Vibrio_phage	86.5	3.2e-20
WP_101053272.1|91616_92810_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	27.5	2.3e-38
WP_101053270.1|93016_93661_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165564248.1|93780_95055_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_101053266.1|95024_95747_-	3-deoxy-D-manno-octulosonic acid kinase	NA	NA	NA	NA	NA
WP_165564249.1|95832_96879_+	glycosyltransferase family 9 protein	NA	NA	NA	NA	NA
WP_165564250.1|97027_98107_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564251.1|98522_99668_-	glycosyltransferase family 9 protein	NA	NA	NA	NA	NA
WP_101053256.1|99676_100453_-	glycosyltransferase family 25 protein	NA	A0A1S5NQ44	Burkholderia_phage	24.2	1.0e-10
WP_165565953.1|100470_101316_-	glycosyltransferase family 8 protein	NA	NA	NA	NA	NA
WP_101053254.1|101356_102310_-	ADP-glyceromanno-heptose 6-epimerase	NA	R9S880	Prochlorococcus_phage	37.5	3.3e-35
WP_165564252.1|102361_103396_-	glycosyltransferase family 9 protein	NA	NA	NA	NA	NA
WP_101096238.1|103710_104202_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	43.5	4.5e-28
WP_101053248.1|104207_105701_+	capsule assembly Wzi family protein	NA	NA	NA	NA	NA
WP_117200940.1|105899_106631_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_071475709.1|106632_107307_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_165564253.1|107306_109028_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_165564254.1|109035_109851_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	A0A127AWE5	Bacillus_phage	32.5	1.8e-21
WP_101053244.1|109867_110326_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109247429.1|110380_111367_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_165564255.1|111375_113181_-	bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein MobB/molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_101053238.1|113190_113784_-	molybdenum cofactor guanylyltransferase	NA	NA	NA	NA	NA
WP_101053235.1|113767_114475_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	26.4	3.8e-12
WP_101053233.1|114483_115191_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_101053231.1|115187_116000_-	solute-binding protein	NA	NA	NA	NA	NA
WP_052248224.1|116232_117663_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_101053229.1|117665_119774_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_165564256.1|120452_121142_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_144190848.1|121495_122149_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_025009092.1|122157_122688_-	thioesterase family protein	NA	NA	NA	NA	NA
WP_165564257.1|122802_124842_-	oligopeptidase A	NA	NA	NA	NA	NA
WP_165564258.1|125158_125866_+	hypothetical protein	NA	NA	NA	NA	NA
WP_101053219.1|125946_126483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_101053217.1|126611_127967_+	glutathione-disulfide reductase	NA	NA	NA	NA	NA
WP_165564259.1|128210_128825_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165564260.1|128815_130687_+	MFS transporter	NA	NA	NA	NA	NA
WP_165564261.1|130754_131870_-|tRNA	tRNA 2-selenouridine(34) synthase MnmH	tRNA	NA	NA	NA	NA
WP_165564262.1|131866_132910_-	selenide, water dikinase SelD	NA	NA	NA	NA	NA
WP_101053207.1|133042_134149_-	acyl-CoA desaturase	NA	F2NZ38	Diadromus_pulchellus_ascovirus	34.1	5.5e-34
WP_025010659.1|134292_134907_+	HTH-type transcriptional repressor FabR	NA	NA	NA	NA	NA
WP_165564263.1|135369_135744_+	hypothetical protein	NA	NA	NA	NA	NA
WP_115389073.1|135805_136756_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.6	4.3e-43
WP_165564264.1|136910_138017_-	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_165564265.1|138073_140293_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_021024261.1|140472_141420_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
WP_165564266.1|141366_141699_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165565954.1|141759_142482_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA	NA
WP_021024261.1|142632_143580_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
WP_165564267.1|143619_144177_-	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_101053197.1|144682_148309_-	transporter substrate-binding domain-containing protein	NA	A0A1V0SGX0	Hokovirus	30.3	3.4e-40
WP_021024261.1|148537_149485_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
WP_165564268.1|149459_150020_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_021024261.1|150117_151065_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
>prophage 2
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	720010	787397	4910425	transposase,protease,tRNA	Bacillus_virus(21.43%)	59	NA	NA
WP_000082736.1|720010_720991_+|transposase	IS5-like element ISEc68 family transposase	transposase	Q38213	Escherichia_phage	80.9	1.4e-153
WP_101054943.1|721304_722144_+	3',5'-cyclic-AMP phosphodiesterase	NA	NA	NA	NA	NA
WP_101054945.1|722179_722755_+	esterase YqiA	NA	NA	NA	NA	NA
WP_101054947.1|722808_724695_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	35.2	1.8e-96
WP_165564468.1|724739_725918_+	L-sorbosone dehydrogenase	NA	NA	NA	NA	NA
WP_165564469.1|725917_728185_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	34.1	1.3e-74
WP_165564470.1|728277_728469_-	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_165564471.1|728760_729687_-	D-2-hydroxyacid dehydrogenase	NA	A0A1B1IVB5	uncultured_Mediterranean_phage	26.9	2.4e-06
WP_100143104.1|729735_730068_+	DUF3392 domain-containing protein	NA	NA	NA	NA	NA
WP_165564472.1|730104_730824_-	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA	NA
WP_165564473.1|730830_734034_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_165565966.1|734109_735006_-	DMT family transporter	NA	NA	NA	NA	NA
WP_165564474.1|735002_735866_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_101054961.1|735897_736962_-	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA	NA
WP_025009371.1|737074_737620_+	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	38.7	3.0e-25
WP_039035507.1|738820_739276_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157822699.1|739408_739585_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165564475.1|739697_741182_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_101057404.1|741220_741703_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_165564476.1|741689_743015_+	AMIN domain-containing protein	NA	M1HNA7	Bacillus_virus	27.5	8.4e-21
WP_101057408.1|743022_744885_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	40.7	6.2e-54
WP_101057410.1|744877_745804_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_039035513.1|745890_746166_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_101095577.1|746186_747494_+	GTPase HflX	NA	NA	NA	NA	NA
WP_101057415.1|747529_748669_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_039035516.1|748672_749596_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_039035517.1|749974_750565_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_025011323.1|750564_751782_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_039035518.1|751778_752474_+	cytochrome c1	NA	NA	NA	NA	NA
WP_039035519.1|752569_753199_+	stringent starvation protein A	NA	NA	NA	NA	NA
WP_101057419.1|753198_753651_+|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	42.1	4.4e-22
WP_165564477.1|753684_754455_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_115389451.1|754512_755663_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	39.4	2.8e-49
WP_165564478.1|755723_756065_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165564479.1|756233_756806_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	54.2	4.5e-56
WP_165565967.1|756983_759464_+	S9 family peptidase	NA	NA	NA	NA	NA
WP_101056776.1|759600_760743_+	HDOD domain-containing protein	NA	NA	NA	NA	NA
WP_107110101.1|760780_761686_+	alpha/beta hydrolase	NA	A0A2P1EM31	Moumouvirus	25.0	2.6e-13
WP_101056774.1|761991_763209_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	28.1	5.2e-25
WP_039035546.1|763310_764330_+	arginine N-succinyltransferase	NA	NA	NA	NA	NA
WP_165564480.1|764340_765801_+	succinylglutamate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_101056772.1|765884_766685_+	DUF1338 domain-containing protein	NA	NA	NA	NA	NA
WP_101056771.1|767012_767405_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564481.1|768344_771803_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564482.1|771883_773215_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_101056768.1|773214_773889_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_101056767.1|773869_774217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025011303.1|774301_774937_-	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA	NA
WP_101056766.1|775329_776076_+	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_039035531.1|776421_777309_-	phosphoribulokinase	NA	NA	NA	NA	NA
WP_156020294.1|777412_777670_-	YheU family protein	NA	NA	NA	NA	NA
WP_101056779.1|777653_778631_-	hydrolase	NA	NA	NA	NA	NA
WP_101056764.1|778753_779260_+	TAT leader-containing periplasmic protein	NA	NA	NA	NA	NA
WP_101056763.1|779279_780893_+	GMC family oxidoreductase	NA	NA	NA	NA	NA
WP_096141983.1|780852_781305_-	DUF2390 domain-containing protein	NA	NA	NA	NA	NA
WP_062793747.1|781349_783257_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	32.5	1.8e-69
WP_165564483.1|783587_785492_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144220432.1|785491_786241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564484.1|786446_787397_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.6	5.6e-43
>prophage 3
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	877982	899706	4910425	transposase,plate	Staphylococcus_phage(66.67%)	16	NA	NA
WP_021024261.1|877982_878930_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
WP_165564507.1|879044_880502_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564508.1|881445_881997_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021024261.1|881971_882919_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
WP_165564509.1|882917_883646_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564510.1|885791_886823_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_165564511.1|887451_888720_+	beta-lactamase family protein	NA	A0A0K1LTU3	Mycobacterium_phage	28.0	3.3e-30
WP_165564512.1|889448_891389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565969.1|891594_892536_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_101052563.1|892699_893275_+	hypothetical protein	NA	NA	NA	NA	NA
WP_101052561.1|893386_893623_-	DUF465 domain-containing protein	NA	NA	NA	NA	NA
WP_165564513.1|894479_894968_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_165564514.1|895053_896529_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_101052557.1|896534_896963_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_165564515.1|896965_898732_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_165564516.1|898695_899706_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 4
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	1122048	1189954	4910425	transposase,integrase,protease,tRNA	Escherichia_phage(12.5%)	57	1129683:1129698	1149911:1149926
WP_165564589.1|1122048_1124004_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	A0A0P0CCN8	Ostreococcus_mediterraneus_virus	44.2	4.7e-121
WP_165564590.1|1124117_1124954_+	dihydropteroate synthase	NA	S4W084	Pandoravirus	29.9	2.6e-15
WP_165564591.1|1125052_1126390_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_039033635.1|1126572_1127355_+	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_101053947.1|1127356_1127662_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_025887922.1|1128092_1128548_+	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_039033638.1|1128575_1130075_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
1129683:1129698	attL	GACGAAGATTTCGCCC	NA	NA	NA	NA
WP_101053953.1|1130099_1132757_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	24.0	1.8e-22
WP_101053956.1|1132814_1133228_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_165564592.1|1133227_1134181_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_039033642.1|1134275_1134545_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_101053963.1|1134672_1136727_-	EAL domain-containing protein	NA	G3MA91	Bacillus_virus	32.7	3.2e-19
WP_165564593.1|1136930_1139033_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_165564594.1|1139186_1140086_+	lipoprotein NlpI	NA	NA	NA	NA	NA
WP_000122829.1|1141038_1141359_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_165564595.1|1141351_1142566_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_000127614.1|1142782_1142977_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_145573938.1|1142988_1144230_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	A0A291AWU1	Escherichia_phage	39.8	7.8e-77
WP_040513628.1|1144231_1144501_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165564596.1|1144503_1145478_-	ParM/StbA family protein	NA	NA	NA	NA	NA
WP_165564597.1|1145942_1146386_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564598.1|1146396_1147665_-	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	59.7	3.5e-141
WP_165564599.1|1147672_1148122_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A218MND2	uncultured_virus	55.6	1.6e-35
WP_165564600.1|1148762_1149668_+	DNA polymerase III subunit epsilon	NA	A0A2H4P6W5	Pseudomonas_phage	25.6	2.3e-06
WP_165564601.1|1149881_1150181_+	hypothetical protein	NA	NA	NA	NA	NA
1149911:1149926	attR	GGGCGAAATCTTCGTC	NA	NA	NA	NA
WP_165564602.1|1150498_1151452_+	WYL domain-containing protein	NA	NA	NA	NA	NA
WP_165564603.1|1151511_1153071_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	42.1	7.9e-103
WP_165564604.1|1153067_1154291_+	restriction endonuclease subunit S	NA	F2Y1N5	Organic_Lake_phycodnavirus	33.9	2.1e-26
WP_165564605.1|1154379_1155381_+	Fic family protein	NA	NA	NA	NA	NA
WP_165564606.1|1155444_1158558_+	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
WP_165564607.1|1158670_1158967_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_165564608.1|1159086_1161237_+	phosphohydrolase	NA	NA	NA	NA	NA
WP_165564609.1|1161285_1163121_+	conjugative transfer system coupling protein TraD	NA	NA	NA	NA	NA
WP_165564610.1|1163130_1163691_+	conjugative transfer protein	NA	NA	NA	NA	NA
WP_032481061.1|1163677_1164313_+	DUF4400 domain-containing protein	NA	NA	NA	NA	NA
WP_145573977.1|1164451_1165558_+	DUF4172 domain-containing protein	NA	D7RWK9	Brochothrix_phage	26.5	8.3e-06
WP_145573979.1|1165747_1166029_+	type IV conjugative transfer system protein TraL	NA	NA	NA	NA	NA
WP_025441422.1|1166025_1166652_+	pilus assembly protein	NA	NA	NA	NA	NA
WP_165565980.1|1166635_1167532_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564611.1|1167534_1168824_+	conjugal transfer protein TraB	NA	NA	NA	NA	NA
WP_165564612.1|1168898_1169471_+	type IV conjugative transfer system lipoprotein TraV	NA	NA	NA	NA	NA
WP_165564613.1|1169467_1169854_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065274325.1|1169894_1170401_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_032481064.1|1170391_1170658_-	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_021024261.1|1171032_1171980_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
WP_029627976.1|1172890_1173829_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165564614.1|1174170_1174866_+	DsbC family protein	NA	NA	NA	NA	NA
WP_133040735.1|1175952_1176693_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	50.0	1.3e-58
WP_165564615.1|1176707_1178228_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	43.9	1.2e-119
WP_165564616.1|1179945_1181049_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q9G0F2	Phage_Gifsy-1	66.6	4.4e-140
WP_001044650.1|1181178_1181526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031859252.1|1181602_1182022_+	peptidase	NA	NA	NA	NA	NA
WP_165565981.1|1182032_1183157_+	pilus assembly protein	NA	NA	NA	NA	NA
WP_053980155.1|1183140_1184169_+	conjugal transfer protein TraU	NA	NA	NA	NA	NA
WP_165564617.1|1184171_1187864_+	conjugal transfer protein TraN	NA	NA	NA	NA	NA
WP_165564618.1|1188096_1188765_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_000082736.1|1188973_1189954_-|transposase	IS5-like element ISEc68 family transposase	transposase	Q38213	Escherichia_phage	80.9	1.4e-153
>prophage 5
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	1205526	1217671	4910425	transposase	Acidithiobacillus_phage(25.0%)	13	NA	NA
WP_133040735.1|1205526_1206267_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	50.0	1.3e-58
WP_165564295.1|1206281_1207802_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	43.9	9.1e-120
WP_165564633.1|1208179_1208506_+	plasmid-related protein	NA	NA	NA	NA	NA
WP_032479266.1|1208603_1209707_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q9G0F2	Phage_Gifsy-1	67.1	1.8e-141
WP_165564634.1|1209836_1210256_+	single-stranded DNA-binding protein	NA	A0A0R6PHK0	Moraxella_phage	42.3	1.5e-19
WP_001963281.1|1210335_1211154_+	phage recombination protein Bet	NA	A0A088CBI3	Shigella_phage	55.4	1.8e-53
WP_015066581.1|1211235_1211379_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564635.1|1211439_1212456_+	endonuclease	NA	U6C712	Ralstonia_phage	37.4	6.9e-07
WP_045611052.1|1212665_1213625_+	AAA domain-containing protein	NA	L7TKP0	Rhizobium_phage	35.0	1.1e-30
WP_165564636.1|1213624_1214392_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032475126.1|1214490_1215444_+	DUF3150 domain-containing protein	NA	NA	NA	NA	NA
WP_015066586.1|1215505_1215946_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564637.1|1216015_1217671_+	VWA domain-containing protein	NA	L7TNG1	Rhizobium_phage	30.6	1.4e-09
>prophage 6
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	1229068	1299125	4910425	transposase	Escherichia_phage(21.43%)	60	NA	NA
WP_165564640.1|1229068_1230013_-|transposase	IS5 family transposase	transposase	A0A077SK28	Escherichia_phage	58.1	3.7e-95
WP_073646385.1|1230628_1231759_-	nucleoid-associated protein	NA	NA	NA	NA	NA
WP_023049207.1|1232408_1233236_+	DUF945 domain-containing protein	NA	K4F5L3	Cronobacter_phage	41.4	1.7e-43
WP_165564641.1|1233317_1235399_+	ParB/RepB/Spo0J family partition protein	NA	G8DH78	Emiliania_huxleyi_virus	26.4	4.9e-23
WP_165564642.1|1235460_1235670_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564643.1|1236445_1236760_+	DUF736 domain-containing protein	NA	NA	NA	NA	NA
WP_165564644.1|1236793_1237084_-	helix-turn-helix transcriptional regulator	NA	A0A0K2CP57	Brevibacillus_phage	50.0	1.8e-05
WP_165564645.1|1237346_1237694_+	DUF2958 domain-containing protein	NA	A0A1W6DX76	Sphingobium_phage	45.0	2.8e-16
WP_165564646.1|1238015_1238786_+	DUF2285 domain-containing protein	NA	NA	NA	NA	NA
WP_165564647.1|1238898_1239183_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_165564648.1|1239197_1240058_+	replication initiator protein A	NA	NA	NA	NA	NA
WP_165564649.1|1240108_1240351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564650.1|1240347_1240986_+	AAA family ATPase	NA	B0ZSI1	Halomonas_phage	40.6	1.6e-30
WP_029043636.1|1240982_1241270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564651.1|1241266_1241812_+	DUF2840 domain-containing protein	NA	NA	NA	NA	NA
WP_165564652.1|1242467_1244453_+	relaxase/mobilization nuclease and DUF3363 domain-containing protein	NA	NA	NA	NA	NA
WP_165565982.1|1244743_1245805_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_165564653.1|1245801_1249116_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.4	1.9e-45
WP_165564654.1|1249108_1250599_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_165564655.1|1250608_1252354_+	ubiquinone biosynthesis protein UbiB	NA	E5EQ95	Micromonas_sp._RCC1109_virus	27.1	8.2e-40
WP_165565983.1|1255125_1255827_+	CerR family C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_165564656.1|1255863_1256472_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564657.1|1256520_1257228_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012584381.1|1257337_1257619_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012585336.1|1257649_1258099_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012584383.1|1258235_1259156_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012585335.1|1259177_1259441_+	EexN family lipoprotein	NA	NA	NA	NA	NA
WP_165564658.1|1259674_1261678_+	conjugal transfer protein TraG	NA	NA	NA	NA	NA
WP_165564659.1|1261674_1262139_+	CopG family transcriptional regulator	NA	NA	NA	NA	NA
WP_165564660.1|1262135_1263206_+	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA	NA
WP_165564661.1|1263202_1263589_+	conjugal transfer protein TrbC	NA	NA	NA	NA	NA
WP_165564662.1|1263585_1263855_+	conjugal transfer protein TrbD	NA	NA	NA	NA	NA
WP_165564663.1|1263867_1266318_+	conjugal transfer protein TrbE	NA	NA	NA	NA	NA
WP_165564664.1|1266314_1267058_+	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA	NA
WP_165564665.1|1267070_1268465_+	P-type conjugative transfer protein TrbL	NA	NA	NA	NA	NA
WP_019439181.1|1268482_1269187_+	conjugal transfer protein TrbF	NA	NA	NA	NA	NA
WP_165564666.1|1269183_1270188_+	P-type conjugative transfer protein TrbG	NA	NA	NA	NA	NA
WP_165564667.1|1270190_1271468_+	TrbI/VirB10 family protein	NA	NA	NA	NA	NA
WP_165564668.1|1271464_1271698_+	DUF2274 domain-containing protein	NA	NA	NA	NA	NA
WP_165564669.1|1271842_1272781_+	hypothetical protein	NA	NA	NA	NA	NA
WP_115389053.1|1273273_1273900_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_165564670.1|1274142_1274745_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_115389051.1|1274806_1275820_+	NAD(P)-dependent alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	23.9	8.2e-08
WP_115389050.1|1275833_1276745_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_052324032.1|1278227_1279394_+	alkene reductase	NA	NA	NA	NA	NA
WP_006814859.1|1279736_1281128_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_006814858.1|1281208_1281625_+	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_165564671.1|1281626_1282784_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_115389047.1|1282796_1283834_+	NADP-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_115389046.1|1283843_1284521_+	type 1 glutamine amidotransferase domain-containing protein	NA	NA	NA	NA	NA
WP_165564672.1|1284634_1285228_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565984.1|1285235_1286327_+	alkene reductase	NA	NA	NA	NA	NA
WP_165565985.1|1286606_1287317_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105934647.1|1287751_1288774_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_165564673.1|1289101_1290082_+|transposase	IS5 family transposase	transposase	Q38213	Escherichia_phage	81.8	3.9e-156
WP_165564674.1|1290593_1292252_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	33.9	4.7e-29
WP_165564673.1|1292469_1293450_+|transposase	IS5 family transposase	transposase	Q38213	Escherichia_phage	81.8	3.9e-156
WP_133040735.1|1293794_1294535_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	50.0	1.3e-58
WP_165564295.1|1294549_1296070_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	43.9	9.1e-120
WP_105934647.1|1298102_1299125_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	1373718	1432975	4910425	transposase,tRNA	Enterobacteria_phage(16.67%)	53	NA	NA
WP_101056712.1|1373718_1374915_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	26.7	1.4e-22
WP_165564696.1|1375018_1375450_-	hypothetical protein	NA	NA	NA	NA	NA
WP_101056718.1|1375544_1375955_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_165564697.1|1376020_1376644_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
WP_039033703.1|1376643_1377018_-	DUF2721 domain-containing protein	NA	NA	NA	NA	NA
WP_165564698.1|1377088_1378078_-	cobalamin biosynthesis protein CbiB	NA	NA	NA	NA	NA
WP_101056708.1|1378098_1378791_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_165564699.1|1379009_1380416_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_165564700.1|1380422_1384871_-	glutamate synthase large subunit	NA	NA	NA	NA	NA
WP_101056705.1|1385371_1386292_+	TIGR01212 family radical SAM protein	NA	NA	NA	NA	NA
WP_039033706.1|1386440_1386806_+	histidine kinase	NA	NA	NA	NA	NA
WP_052248010.1|1387061_1387970_+	hydrogen peroxide-inducible genes activator	NA	NA	NA	NA	NA
WP_165564701.1|1389076_1395091_+	hypothetical protein	NA	NA	NA	NA	NA
WP_114139936.1|1395105_1396229_-|transposase	IS3-like element ISVpa4 family transposase	transposase	Q6H9S3	Enterobacteria_phage	31.8	1.9e-26
WP_165564702.1|1396331_1397342_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564703.1|1397338_1397995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564704.1|1398199_1398604_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564705.1|1398646_1399330_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564706.1|1399372_1399615_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564707.1|1399630_1399870_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_114139936.1|1400923_1402047_-|transposase	IS3-like element ISVpa4 family transposase	transposase	Q6H9S3	Enterobacteria_phage	31.8	1.9e-26
WP_165564708.1|1402527_1403517_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_165564709.1|1404341_1404560_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564710.1|1404622_1405039_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	70.5	2.1e-50
WP_165564711.1|1405084_1406290_+|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	61.6	2.9e-137
WP_165564712.1|1406334_1406652_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564713.1|1406859_1407942_-	adenylate/guanylate cyclase domain-containing protein	NA	NA	NA	NA	NA
WP_039034193.1|1408064_1408739_-	DNA mismatch repair endonuclease MutH	NA	NA	NA	NA	NA
WP_025010542.1|1409437_1409962_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_165564714.1|1409987_1412222_+	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	28.9	1.1e-12
WP_039034195.1|1412269_1413070_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_039034196.1|1413107_1413935_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_101053477.1|1413934_1414729_+	thymidylate synthase	NA	A6M9A2	Geobacillus_virus	70.8	3.6e-112
WP_101053479.1|1414846_1416022_+	Na+/H+ antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	52.1	2.6e-90
WP_101053628.1|1416033_1416402_+	hypothetical protein	NA	NA	NA	NA	NA
WP_101053481.1|1416418_1417327_+	transcriptional activator NhaR	NA	NA	NA	NA	NA
WP_028779782.1|1417425_1417665_+	succinate dehydrogenase assembly factor 2	NA	NA	NA	NA	NA
WP_165564715.1|1417645_1418068_+	hypothetical protein	NA	NA	NA	NA	NA
WP_101053485.1|1418084_1419695_-	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_025010551.1|1419894_1420473_+	RNA polymerase sigma factor RpoE	NA	A0A0F6TH34	Sinorhizobium_phage	27.9	9.7e-06
WP_165564716.1|1420497_1421118_+	anti-sigma factor	NA	NA	NA	NA	NA
WP_165564717.1|1421127_1422060_+	MucB/RseB	NA	NA	NA	NA	NA
WP_165564718.1|1422070_1422550_+	SoxR reducing system RseC family protein	NA	NA	NA	NA	NA
WP_165564719.1|1422667_1424458_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	26.1	2.7e-22
WP_025887849.1|1424627_1425542_+	signal peptidase I	NA	NA	NA	NA	NA
WP_101053495.1|1425538_1426222_+	ribonuclease III	NA	A0A2P0VNZ5	Tetraselmis_virus	40.1	1.6e-20
WP_101053497.1|1426218_1427208_+	GTPase Era	NA	NA	NA	NA	NA
WP_165564720.1|1427216_1427939_+	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_101053501.1|1428055_1428793_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_101053503.1|1428792_1429173_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_165564721.1|1429313_1430927_-	PfaD family polyunsaturated fatty acid/polyketide biosynthesis protein	NA	NA	NA	NA	NA
WP_165565991.1|1430970_1431726_-	beta-hydroxydecanoyl-ACP dehydratase	NA	NA	NA	NA	NA
WP_115389451.1|1431825_1432975_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	39.4	2.8e-49
>prophage 8
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	1489354	1496672	4910425		Staphylococcus_phage(50.0%)	7	NA	NA
WP_025887609.1|1489354_1491022_-	energy-dependent translational throttle protein EttA	NA	A0A1B0RXA0	Streptococcus_phage	28.1	3.0e-39
WP_025009435.1|1491250_1492504_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	54.1	3.2e-102
WP_025009434.1|1492613_1493066_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_165564739.1|1493106_1494231_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	34.6	1.2e-47
WP_165564740.1|1494231_1494888_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	31.7	1.2e-25
WP_028779054.1|1494969_1496076_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	37.8	3.9e-64
WP_165564741.1|1496195_1496672_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	47.7	1.9e-31
>prophage 9
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	1680644	1775954	4910425	transposase	Enterobacteria_phage(23.33%)	68	NA	NA
WP_165564803.1|1680644_1682199_+|transposase	IS3-like element ISSpu6 family transposase	transposase	NA	NA	NA	NA
WP_165564804.1|1682743_1683895_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564805.1|1683845_1684985_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_165564806.1|1684977_1685799_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_165564807.1|1687414_1688440_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_114139936.1|1689125_1690248_+|transposase	IS3-like element ISVpa4 family transposase	transposase	Q6H9S3	Enterobacteria_phage	31.8	1.9e-26
WP_165564808.1|1691034_1692648_-|transposase	IS1634-like element ISShes12 family transposase	transposase	NA	NA	NA	NA
WP_165564680.1|1692921_1694481_-|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	34.7	3.4e-69
WP_057786146.1|1694573_1694930_-	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	46.8	5.4e-23
WP_088585668.1|1694932_1695217_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_165564809.1|1695436_1696519_+	UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase	NA	NA	NA	NA	NA
WP_165564810.1|1696672_1697716_+	UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase	NA	NA	NA	NA	NA
WP_165564811.1|1697785_1698670_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.2	4.4e-58
WP_114139936.1|1699125_1700249_-|transposase	IS3-like element ISVpa4 family transposase	transposase	Q6H9S3	Enterobacteria_phage	31.8	1.9e-26
WP_165564812.1|1700313_1700928_+	hypothetical protein	NA	I7I009	Enterobacteria_phage	54.9	1.9e-55
WP_144167885.1|1701184_1702354_-	DUF3596 domain-containing protein	NA	A0A1W6JTA0	Pseudomonas_phage	29.4	8.8e-30
WP_165564813.1|1702868_1703288_-	hypothetical protein	NA	NA	NA	NA	NA
WP_115389451.1|1703581_1704731_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	39.4	2.8e-49
WP_165564295.1|1705866_1707387_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	43.9	9.1e-120
WP_133040735.1|1707401_1708142_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	50.0	1.3e-58
WP_165564814.1|1708687_1710025_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_165564815.1|1710014_1712033_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_165564816.1|1712399_1713659_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_088212423.1|1713658_1713982_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564817.1|1714044_1714653_+	DUF1080 domain-containing protein	NA	NA	NA	NA	NA
WP_165564818.1|1714721_1715702_+|transposase	IS5-like element ISEc68 family transposase	transposase	Q38213	Escherichia_phage	80.6	6.8e-153
WP_055647496.1|1718686_1718947_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_165564819.1|1718948_1719296_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_165564820.1|1719499_1720708_+	molecular chaperone DnaJ	NA	NA	NA	NA	NA
WP_165564821.1|1721501_1721918_-	type II toxin-antitoxin system YafO family toxin	NA	NA	NA	NA	NA
WP_014610940.1|1721908_1722223_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165564822.1|1722432_1723635_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	O80301	Enterobacteria_phage	63.7	3.9e-118
WP_165566001.1|1723695_1724109_+|transposase	IS200/IS605 family transposase	transposase	I4AZM1	Saccharomonospora_phage	55.8	1.2e-34
WP_133040735.1|1724364_1725105_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	50.0	1.3e-58
WP_165564295.1|1725119_1726640_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	43.9	9.1e-120
WP_165564823.1|1730169_1730403_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564824.1|1730434_1731559_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_165564707.1|1731632_1731872_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165564825.1|1732383_1732638_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_165564826.1|1732637_1732967_+	mRNA-degrading endonuclease	NA	Q708N9	Streptococcus_phage	46.9	1.1e-06
WP_165564827.1|1732985_1733426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564818.1|1733871_1734852_+|transposase	IS5-like element ISEc68 family transposase	transposase	Q38213	Escherichia_phage	80.6	6.8e-153
WP_165564824.1|1735151_1736276_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_165564707.1|1736349_1736589_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165564828.1|1737148_1738762_+|transposase	IS1634-like element ISShes12 family transposase	transposase	NA	NA	NA	NA
WP_014610908.1|1739833_1740076_+	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA	NA
WP_165564822.1|1740367_1741570_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	O80301	Enterobacteria_phage	63.7	3.9e-118
WP_114139936.1|1741665_1742789_-|transposase	IS3-like element ISVpa4 family transposase	transposase	Q6H9S3	Enterobacteria_phage	31.8	1.9e-26
WP_165564829.1|1743095_1743563_-	hypothetical protein	NA	NA	NA	NA	NA
WP_133040735.1|1743756_1744497_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	50.0	1.3e-58
WP_165564295.1|1744511_1746032_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	43.9	9.1e-120
WP_165564830.1|1747833_1748844_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165564831.1|1748851_1751773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165564832.1|1751765_1753376_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165564833.1|1753719_1754925_-|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	61.8	2.9e-137
WP_037426855.1|1754970_1755387_+|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	72.0	4.9e-52
WP_165564834.1|1755664_1757176_+	cell filamentation protein Fic	NA	NA	NA	NA	NA
WP_165564835.1|1758401_1758926_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165566002.1|1762274_1762691_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	71.2	7.1e-51
WP_165564711.1|1762763_1763969_+|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	61.6	2.9e-137
WP_165566003.1|1764047_1764956_-	catalase	NA	A0A2K9L572	Tupanvirus	43.0	1.4e-38
WP_165564836.1|1767897_1769025_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	51.8	1.2e-95
WP_165564711.1|1769021_1770227_-|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	61.6	2.9e-137
WP_165564710.1|1770272_1770689_+|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	70.5	2.1e-50
WP_165564837.1|1771045_1772422_-	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_165564838.1|1772718_1773735_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_101056695.1|1773817_1774378_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_165564839.1|1774664_1775954_-|transposase	ISL3-like element ISPpu12 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	40.0	1.4e-84
>prophage 10
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	1794183	1851861	4910425	transposase,tRNA	Salmonella_phage(18.75%)	52	NA	NA
WP_071237192.1|1794183_1795104_+|transposase	IS5 family transposase	transposase	A0A1V0E8E1	Vibrio_phage	97.0	1.1e-173
WP_101056226.1|1795769_1797380_+	malate synthase A	NA	NA	NA	NA	NA
WP_165564846.1|1797453_1798776_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_165564711.1|1799752_1800958_-|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	61.6	2.9e-137
WP_165564710.1|1801003_1801420_+|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	70.5	2.1e-50
WP_165564847.1|1801566_1802238_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564848.1|1802217_1802763_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_165564849.1|1802875_1803700_-	zinc-dependent peptidase	NA	NA	NA	NA	NA
WP_165564850.1|1803878_1804283_-	CopG family transcriptional regulator	NA	NA	NA	NA	NA
WP_101056220.1|1804242_1804986_-	AAA family ATPase	NA	Q2A085	Sodalis_phage	40.6	2.0e-40
WP_165564851.1|1805134_1805479_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039035082.1|1805651_1806116_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_028779188.1|1806342_1806558_+	DUF3820 family protein	NA	NA	NA	NA	NA
WP_165564852.1|1806651_1806951_+	NrfJ	NA	NA	NA	NA	NA
WP_165566006.1|1807077_1807611_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_101095789.1|1807607_1808117_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_165564853.1|1808191_1808884_-	pirin family protein	NA	NA	NA	NA	NA
WP_165564854.1|1809008_1809452_-	DoxX family protein	NA	NA	NA	NA	NA
WP_101095786.1|1809590_1810484_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165564855.1|1810643_1812389_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_101056213.1|1812559_1813636_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_165564856.1|1813838_1814960_+|tRNA	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	tRNA	NA	NA	NA	NA
WP_165564857.1|1814992_1815778_+	type IV pilus biogenesis/stability protein PilW	NA	NA	NA	NA	NA
WP_165564858.1|1815777_1816695_+	DUF4115 domain-containing protein	NA	NA	NA	NA	NA
WP_101056210.1|1816758_1817871_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_165564859.1|1817988_1819266_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_165564860.1|1819284_1819905_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_101056207.1|1819914_1821102_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_101056206.1|1821181_1822648_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_101056205.1|1822834_1824178_-	exodeoxyribonuclease VII large subunit	NA	A0A2H4UVM9	Bodo_saltans_virus	37.8	3.7e-40
WP_101056204.1|1824295_1825762_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.9	1.0e-99
WP_028779200.1|1825865_1827443_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA	NA
WP_165564861.1|1827751_1828057_+	DUF4102 domain-containing protein	NA	Q858E8	Salmonella_phage	62.8	1.3e-25
WP_165566007.1|1828186_1829179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_101056196.1|1829132_1830005_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564862.1|1830235_1831570_-	N-succinylarginine dihydrolase	NA	NA	NA	NA	NA
WP_101056193.1|1831907_1834547_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	33.6	9.6e-93
WP_101056191.1|1834785_1835565_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025011034.1|1835792_1836767_+	HTH-type transcriptional regulator CysB	NA	NA	NA	NA	NA
WP_165564863.1|1837072_1838236_+	nucleotide sugar dehydrogenase	NA	A0A1J0FA55	Only_Syngen_Nebraska_virus	54.2	2.5e-109
WP_165564864.1|1838277_1839282_+	NAD-dependent epimerase	NA	E3T4Y8	Cafeteria_roenbergensis_virus	28.5	3.1e-31
WP_165566008.1|1839358_1839793_-	copper resistance protein NlpE	NA	NA	NA	NA	NA
WP_165564865.1|1840044_1840608_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	48.6	3.8e-47
WP_165564866.1|1840993_1843237_+	catalase/peroxidase HPI	NA	NA	NA	NA	NA
WP_101057490.1|1843624_1843873_+	DUF3297 family protein	NA	NA	NA	NA	NA
WP_165564867.1|1843951_1845167_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	63.6	1.1e-96
WP_021024261.1|1845963_1846911_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
WP_071477077.1|1847028_1847388_+	DUF4810 domain-containing protein	NA	NA	NA	NA	NA
WP_021024261.1|1848097_1849045_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
WP_165564868.1|1849019_1849850_-	curli production assembly protein CsgG	NA	NA	NA	NA	NA
WP_165564833.1|1850193_1851399_-|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	61.8	2.9e-137
WP_165564869.1|1851444_1851861_+|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	72.0	1.1e-51
>prophage 11
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	2137359	2220008	4910425	transposase,protease	Staphylococcus_phage(27.27%)	59	NA	NA
WP_165564965.1|2137359_2138697_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_101057731.1|2138860_2139280_+	HIT family protein	NA	NA	NA	NA	NA
WP_165564966.1|2140060_2142613_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	26.3	1.2e-39
WP_101057727.1|2143860_2146413_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	25.4	3.1e-40
WP_165564967.1|2146582_2148676_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165564968.1|2149262_2151005_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_165564969.1|2151097_2152279_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_025011125.1|2152275_2152890_-	LysE family translocator	NA	NA	NA	NA	NA
WP_045282736.1|2153039_2154080_-	4-hydroxyphenylpyruvate dioxygenase	NA	NA	NA	NA	NA
WP_165564970.1|2154151_2155312_-	homogentisate 1,2-dioxygenase	NA	NA	NA	NA	NA
WP_165564971.1|2155556_2156471_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_039033374.1|2156589_2157384_+	TIGR00266 family protein	NA	NA	NA	NA	NA
WP_039033373.1|2157544_2157865_-	hypothetical protein	NA	NA	NA	NA	NA
WP_101057052.1|2157861_2158326_-	EVE domain-containing protein	NA	NA	NA	NA	NA
WP_101057050.1|2158469_2158820_+	hypothetical protein	NA	NA	NA	NA	NA
WP_101057048.1|2159151_2160873_+	AMP-binding protein	NA	Q75ZG1	Hepacivirus	28.0	3.6e-48
WP_165564972.1|2160935_2161925_-	cytochrome-c peroxidase	NA	NA	NA	NA	NA
WP_101057044.1|2162270_2163038_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_165566019.1|2163078_2164119_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_165564973.1|2164111_2164888_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_101057038.1|2164953_2165361_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_165564974.1|2165709_2166648_+	1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase	NA	NA	NA	NA	NA
WP_101057036.1|2166649_2166886_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100145745.1|2167201_2167375_-	hypothetical protein	NA	NA	NA	NA	NA
WP_101057064.1|2167870_2169460_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_039033365.1|2169545_2170043_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_165564975.1|2170042_2171764_-	acetolactate synthase 3 large subunit	NA	E5ERI2	Ostreococcus_lucimarinus_virus	26.5	6.8e-39
WP_101057032.1|2172249_2173512_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_165564976.1|2174017_2175805_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	25.4	1.2e-14
WP_165564977.1|2175860_2176505_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_165566020.1|2176811_2177792_+	rhodanese-related sulfurtransferase	NA	NA	NA	NA	NA
WP_165566021.1|2178091_2179594_+	alkaline phosphatase	NA	NA	NA	NA	NA
WP_044734347.1|2179608_2181246_+	alkaline phosphatase	NA	NA	NA	NA	NA
WP_145838739.1|2182454_2183957_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_101057265.1|2183961_2186064_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_101057266.1|2186572_2187946_+	molecular chaperone	NA	NA	NA	NA	NA
WP_165564978.1|2187983_2188460_+	CreA family protein	NA	A0A2I7SAK3	Vibrio_phage	35.9	2.6e-17
WP_165564979.1|2188598_2189018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165564980.1|2189571_2191749_+	S9 family peptidase	NA	A0A1V0SHT0	Klosneuvirus	33.5	5.4e-73
WP_025011952.1|2191877_2192279_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_025011953.1|2192268_2192958_+	protein TolQ	NA	NA	NA	NA	NA
WP_071237975.1|2192954_2193392_+	protein TolR	NA	NA	NA	NA	NA
WP_165564981.1|2193392_2194352_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_071237977.1|2194361_2195687_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_071237978.1|2195711_2196251_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_071237979.1|2196277_2197006_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_165564982.1|2198180_2199350_+	porin	NA	NA	NA	NA	NA
WP_165564983.1|2199391_2199646_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165564984.1|2199792_2201745_-	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	40.7	1.3e-94
WP_101057585.1|2202073_2205502_+	sensor histidine kinase	NA	A0A2K9L5I4	Tupanvirus	26.0	4.4e-13
WP_157822701.1|2205572_2206355_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_165564985.1|2206699_2209936_+|protease	protease	protease	NA	NA	NA	NA
WP_165564986.1|2210577_2210760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564987.1|2210749_2211751_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564828.1|2211747_2213361_+|transposase	IS1634-like element ISShes12 family transposase	transposase	NA	NA	NA	NA
WP_021024261.1|2214642_2215590_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
WP_021024261.1|2217356_2218304_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
WP_165564707.1|2218570_2218810_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165564824.1|2218883_2220008_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	2450822	2500632	4910425	transposase,integrase,tRNA	Enterobacteria_phage(23.08%)	50	2467032:2467048	2503852:2503868
WP_115390034.1|2450822_2452148_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_165565061.1|2452606_2453692_+	efflux RND transporter periplasmic adaptor subunit	NA	S5VL44	Leptospira_phage	21.1	3.9e-08
WP_165565062.1|2453688_2456781_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_052247918.1|2457229_2457502_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565063.1|2457627_2459094_+	sensor domain-containing diguanylate cyclase	NA	NA	NA	NA	NA
WP_165566033.1|2459165_2460584_-	dGTPase	NA	NA	NA	NA	NA
WP_165565064.1|2460812_2461274_+	hypothetical protein	NA	NA	NA	NA	NA
WP_101056336.1|2461449_2462412_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	73.8	1.9e-107
WP_039032955.1|2462489_2463416_-	universal stress protein UspE	NA	NA	NA	NA	NA
WP_025010389.1|2463505_2464258_-	FNR family transcription factor	NA	NA	NA	NA	NA
WP_101056337.1|2464313_2465006_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_101056338.1|2464995_2465223_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_165565065.1|2465219_2467616_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	28.2	6.7e-69
2467032:2467048	attL	CAGGGCGAACATCATCA	NA	NA	NA	NA
WP_101056340.1|2467624_2468104_-	FixH family protein	NA	NA	NA	NA	NA
WP_101056347.1|2468208_2469189_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_039032950.1|2469194_2469371_-	CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone	NA	NA	NA	NA	NA
WP_025010382.1|2469381_2469987_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_028779894.1|2469999_2471436_-	cytochrome-c oxidase, cbb3-type subunit I	NA	NA	NA	NA	NA
WP_165565066.1|2471701_2472163_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565067.1|2472199_2473777_-	DUF3369 domain-containing protein	NA	NA	NA	NA	NA
WP_165566034.1|2474283_2475561_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_165565068.1|2476523_2476913_-	helix-turn-helix transcriptional regulator	NA	Q2PZB7	Vibrio_virus	48.2	3.8e-06
WP_165565069.1|2477036_2478179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565070.1|2478190_2478505_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144379719.1|2478522_2478705_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144379718.1|2478695_2478881_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565068.1|2479818_2480208_-	helix-turn-helix transcriptional regulator	NA	Q2PZB7	Vibrio_virus	48.2	3.8e-06
WP_165565069.1|2480331_2481474_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565070.1|2481485_2481800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144379719.1|2481817_2482000_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165564615.1|2482252_2483773_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	43.9	1.2e-119
WP_133040735.1|2483787_2484528_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	50.0	1.3e-58
WP_165565071.1|2485119_2485311_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565072.1|2485310_2485529_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565073.1|2486099_2486276_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165565074.1|2486403_2488008_+	DNA replication protein	NA	A7BJY2	Enterobacteria_phage	35.1	1.4e-65
WP_165565075.1|2488018_2488366_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021024261.1|2488748_2489696_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
WP_165565076.1|2489758_2489953_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165565077.1|2490072_2491269_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565073.1|2491567_2491744_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165565074.1|2491871_2493476_+	DNA replication protein	NA	A7BJY2	Enterobacteria_phage	35.1	1.4e-65
WP_165565075.1|2493486_2493834_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021024261.1|2494216_2495164_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
WP_165565076.1|2495226_2495421_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165565077.1|2495540_2496737_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565073.1|2497035_2497212_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165565074.1|2497339_2498944_+	DNA replication protein	NA	A7BJY2	Enterobacteria_phage	35.1	1.4e-65
WP_165565075.1|2498954_2499302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021024261.1|2499684_2500632_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
2503852:2503868	attR	TGATGATGTTCGCCCTG	NA	NA	NA	NA
>prophage 13
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	2547825	2600285	4910425	transposase	Acidithiobacillus_phage(30.0%)	42	NA	NA
WP_165564295.1|2547825_2549346_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	43.9	9.1e-120
WP_165565096.1|2549571_2550402_+	hypothetical protein	NA	NA	NA	NA	NA
WP_101056494.1|2550403_2550823_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565097.1|2550812_2552033_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_101056492.1|2552032_2552998_+	hypothetical protein	NA	NA	NA	NA	NA
WP_101056521.1|2553039_2553528_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165564965.1|2553700_2555038_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_165565098.1|2555079_2557101_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA	NA
WP_165565099.1|2557297_2559151_+	signal peptide peptidase SppA	NA	A0A291AYD8	Shigella_phage	31.5	1.9e-15
WP_101057512.1|2559258_2560275_+	asparaginase	NA	NA	NA	NA	NA
WP_165565100.1|2560391_2561729_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_039032997.1|2561782_2562064_-	DUF1315 family protein	NA	NA	NA	NA	NA
WP_165565101.1|2562060_2562378_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_165565102.1|2562387_2563515_-	carboxypeptidase family protein	NA	NA	NA	NA	NA
WP_101057519.1|2563661_2564342_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.1	1.3e-28
WP_165565103.1|2564570_2566358_-	DUF885 domain-containing protein	NA	NA	NA	NA	NA
WP_165565104.1|2566780_2569384_-	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_025010407.1|2569726_2570359_+	YchE family NAAT transporter	NA	NA	NA	NA	NA
WP_101057525.1|2571282_2571786_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_165565105.1|2572655_2574656_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.0	4.2e-24
WP_101056653.1|2574818_2575886_-	quinolinate synthase NadA	NA	NA	NA	NA	NA
WP_165565106.1|2576053_2577658_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_071476039.1|2577668_2578646_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_101056655.1|2578648_2579827_-	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	NA	NA	NA	NA	NA
WP_165565107.1|2579990_2581028_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
WP_165565108.1|2581324_2581804_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_165565109.1|2581874_2583542_-	alpha-D-glucose phosphate-specific phosphoglucomutase	NA	NA	NA	NA	NA
WP_101056659.1|2583579_2584134_-	replication initiation negative regulator SeqA	NA	NA	NA	NA	NA
WP_101056660.1|2584434_2585211_+	alpha/beta fold hydrolase	NA	A0A023W7H4	Mycobacterium_phage	32.1	2.8e-08
WP_039033014.1|2585310_2585532_+	DUF2788 domain-containing protein	NA	NA	NA	NA	NA
WP_025010403.1|2585546_2585816_+	LexA regulated protein	NA	NA	NA	NA	NA
WP_039033015.1|2585870_2586398_+	flavodoxin FldA	NA	NA	NA	NA	NA
WP_101056661.1|2586475_2587672_+	elongation factor P maturation arginine rhamnosyltransferase EarP	NA	NA	NA	NA	NA
WP_025010405.1|2587717_2588281_+	elongation factor P	NA	NA	NA	NA	NA
WP_165565110.1|2588539_2589520_+|transposase	IS5-like element ISEc68 family transposase	transposase	Q38213	Escherichia_phage	80.6	3.1e-153
WP_165565111.1|2589630_2590179_-	riboflavin synthase subunit alpha	NA	A0A2I2L4R9	Orpheovirus	38.5	1.2e-18
WP_101056663.1|2590212_2591589_+	MATE family efflux transporter	NA	NA	NA	NA	NA
WP_165565112.1|2592144_2594847_+	bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_165565113.1|2594934_2596560_-	phosphoethanolamine--lipid A transferase	NA	NA	NA	NA	NA
WP_133040735.1|2596692_2597433_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	50.0	1.3e-58
WP_165564295.1|2597447_2598968_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	43.9	9.1e-120
WP_021024261.1|2599337_2600285_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
>prophage 14
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	3173627	3183650	4910425		Acinetobacter_phage(14.29%)	10	NA	NA
WP_165565309.1|3173627_3176300_-	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	29.8	2.9e-81
WP_025011497.1|3176689_3177121_-	nucleoside-diphosphate kinase	NA	L7Y4C4	Megavirus	40.2	4.8e-18
WP_100142340.1|3177520_3177718_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_165565310.1|3177810_3178710_-	30S ribosomal protein S6--L-glutamate ligase	NA	I3ULC9	Synechococcus_phage	33.3	7.2e-40
WP_165565311.1|3178842_3179178_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_165565312.1|3179186_3181049_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	40.5	1.6e-105
WP_165565313.1|3181132_3181657_-	co-chaperone HscB	NA	NA	NA	NA	NA
WP_025011492.1|3181681_3182005_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	43.0	1.2e-21
WP_101057142.1|3182019_3182403_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	77.0	2.4e-53
WP_165565314.1|3182435_3183650_-	IscS subfamily cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	32.6	3.0e-33
>prophage 15
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	4105451	4153523	4910425	transposase,protease,tRNA,bacteriocin	Staphylococcus_phage(33.33%)	47	NA	NA
WP_165565661.1|4105451_4106297_-|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	tRNA	S4VW33	Pandoravirus	29.0	6.4e-14
WP_165565662.1|4106865_4107948_+	porin	NA	NA	NA	NA	NA
WP_165565663.1|4108065_4108722_-	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_071237380.1|4109156_4110050_+	EamA family transporter RarD	NA	NA	NA	NA	NA
WP_165565664.1|4110035_4110746_-|tRNA	tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD	tRNA	NA	NA	NA	NA
WP_165565665.1|4110838_4111576_-	DsbA family protein	NA	NA	NA	NA	NA
WP_165565666.1|4111587_4112115_-	protein disulfide oxidoreductase	NA	NA	NA	NA	NA
WP_165565667.1|4112111_4114199_-	thiol:disulfide interchange protein	NA	NA	NA	NA	NA
WP_101056618.1|4114261_4114666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165565668.1|4114822_4115506_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_165565669.1|4115536_4116709_-	MFS transporter TsgA	NA	NA	NA	NA	NA
WP_101056621.1|4117012_4117711_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_165565670.1|4117869_4119054_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_101056623.1|4119279_4120839_+	MFS transporter	NA	NA	NA	NA	NA
WP_071239147.1|4121429_4122533_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	28.0	8.0e-17
WP_144133927.1|4122729_4123188_+	universal stress protein	NA	NA	NA	NA	NA
WP_101057561.1|4123198_4124479_-	CadC family transcriptional regulator	NA	NA	NA	NA	NA
WP_165565671.1|4124651_4125491_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_101057557.1|4125490_4126402_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.2	2.7e-18
WP_165565672.1|4126388_4127696_-	nitrous oxide reductase family maturation protein NosD	NA	NA	NA	NA	NA
WP_101057553.1|4127698_4128199_-	nitrous oxide reductase accessory protein NosL	NA	NA	NA	NA	NA
WP_101057551.1|4128276_4128930_-	nitrite reductase	NA	NA	NA	NA	NA
WP_165565673.1|4128941_4129694_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_101057547.1|4129732_4130179_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_165565674.1|4130231_4132268_-	cytochrome C	NA	NA	NA	NA	NA
WP_101057543.1|4132657_4134586_+	heme lyase NrfEFG subunit NrfE	NA	NA	NA	NA	NA
WP_071475497.1|4134578_4134977_+	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA	NA
WP_165565675.1|4134874_4135573_+	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_165565676.1|4136450_4136666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165565677.1|4136833_4137016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165565678.1|4136999_4137179_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165565679.1|4138247_4138628_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_101056742.1|4138867_4140115_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_165566082.1|4140132_4142277_+	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	26.7	2.8e-34
WP_165565680.1|4142482_4142647_+|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_165565681.1|4142658_4142802_+|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_157822693.1|4142815_4142962_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565682.1|4143005_4143257_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082014390.1|4143389_4143725_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565683.1|4143883_4144870_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_165565684.1|4145061_4146018_-	pseudouridine synthase	NA	NA	NA	NA	NA
WP_025009287.1|4146099_4146687_-|protease	ATP-dependent protease	protease	NA	NA	NA	NA
WP_165565685.1|4146855_4147911_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_165565686.1|4148349_4150743_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	39.4	8.6e-16
WP_165565687.1|4150940_4151405_+	DUF386 domain-containing protein	NA	NA	NA	NA	NA
WP_146509689.1|4151458_4152166_-	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_021024261.1|4152575_4153523_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.0	6.2e-42
>prophage 16
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	4413758	4423742	4910425	transposase	Acidithiobacillus_phage(28.57%)	9	NA	NA
WP_133040735.1|4413758_4414499_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	50.0	1.3e-58
WP_165564295.1|4414513_4416034_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	43.9	9.1e-120
WP_165565770.1|4416259_4416442_+	AlpA family phage regulatory protein	NA	B7SYF9	Stenotrophomonas_phage	44.9	9.4e-08
WP_165565771.1|4416428_4418171_+	DUF927 domain-containing protein	NA	A0A1B0VP75	Pseudomonas_phage	32.0	2.7e-59
WP_165565772.1|4418443_4418674_+	helix-turn-helix transcriptional regulator	NA	S5MTW4	Brevibacillus_phage	38.2	2.2e-06
WP_165565773.1|4418670_4420170_+	SAM-dependent DNA methyltransferase	NA	A0A220A2U4	Liberibacter_phage	76.8	1.1e-226
WP_165565774.1|4420166_4420796_+	DUF4062 domain-containing protein	NA	NA	NA	NA	NA
WP_165565775.1|4420788_4422243_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_165565776.1|4422239_4423742_+	SAM-dependent DNA methyltransferase	NA	A0A220A2U5	Liberibacter_phage	76.8	6.1e-209
>prophage 17
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	4431617	4439324	4910425	transposase,integrase	Acidithiobacillus_phage(33.33%)	7	4431343:4431356	4443858:4443871
4431343:4431356	attL	TCGTCATGCCGTCT	NA	NA	NA	NA
WP_165564615.1|4431617_4433138_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	43.9	1.2e-119
WP_133040735.1|4433152_4433893_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	50.0	1.3e-58
WP_165565782.1|4434392_4436801_-	DEAD/DEAH box helicase family protein	NA	W8W1P4	Invertebrate_iridescent_virus	27.7	2.9e-27
WP_000354815.1|4436826_4437198_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	56.4	1.2e-30
WP_165565783.1|4437229_4437532_-	type II toxin-antitoxin system HigB family toxin	NA	F5A3A2	Riemerella_phage	31.0	1.3e-09
WP_064663314.1|4437727_4438066_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165565784.1|4438067_4439324_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	A0A1W6JPG6	Morganella_phage	38.8	9.0e-73
4443858:4443871	attR	TCGTCATGCCGTCT	NA	NA	NA	NA
>prophage 18
NZ_CP045857	Shewanella chilikensis strain DC57 chromosome, complete genome	4910425	4531271	4605107	4910425	transposase,tRNA	Bacillus_phage(40.0%)	59	NA	NA
WP_028780049.1|4531271_4531709_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_165566089.1|4531705_4532668_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_144168622.1|4532648_4533497_-	virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_028780047.1|4533718_4533937_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039034687.1|4533957_4534608_+	DUF2959 domain-containing protein	NA	NA	NA	NA	NA
WP_101055355.1|4534789_4536004_+	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_165565825.1|4536157_4537210_+	XdhC/CoxI family protein	NA	NA	NA	NA	NA
WP_101055289.1|4537206_4537851_+	NTP transferase domain-containing protein	NA	NA	NA	NA	NA
WP_101055287.1|4537854_4538310_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_165565826.1|4538306_4540547_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_101055283.1|4540712_4541774_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_101055281.1|4541783_4542290_-	2,4'-dihydroxyacetophenone dioxygenase	NA	NA	NA	NA	NA
WP_101055279.1|4542333_4543098_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_165565827.1|4543236_4544241_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_101055275.1|4544324_4546136_-	translational GTPase TypA	NA	NA	NA	NA	NA
WP_101055273.1|4546593_4548003_+	glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_165565828.1|4548107_4548605_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165565829.1|4548614_4549538_-	cytochrome C	NA	NA	NA	NA	NA
WP_165565830.1|4549774_4550821_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565831.1|4550944_4551802_+	EamA family transporter	NA	NA	NA	NA	NA
WP_101055263.1|4551892_4553125_+	MFS transporter	NA	NA	NA	NA	NA
WP_165565832.1|4553231_4555211_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165565833.1|4555223_4556381_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_028780035.1|4556452_4556998_+	DUF4124 domain-containing protein	NA	NA	NA	NA	NA
WP_165565834.1|4557113_4558172_+	nitrogen regulation protein NR(II)	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.4	1.3e-08
WP_165565835.1|4558188_4559592_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_165565836.1|4559643_4559976_-	hypothetical protein	NA	NA	NA	NA	NA
WP_101055248.1|4559987_4560857_-	cation diffusion facilitator family transporter	NA	NA	NA	NA	NA
WP_165565837.1|4560902_4561421_-	Spy/CpxP family protein refolding chaperone	NA	NA	NA	NA	NA
WP_039034710.1|4561629_4562316_+	response regulator	NA	W8CYM9	Bacillus_phage	40.1	1.8e-35
WP_165565838.1|4562315_4563683_+	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	28.8	1.2e-17
WP_165565839.1|4563953_4564958_-	permease	NA	NA	NA	NA	NA
WP_165565840.1|4565075_4565330_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_101055236.1|4565394_4565685_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_165565841.1|4566153_4566828_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_025010766.1|4566950_4567817_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165565842.1|4567855_4569100_-	hypothetical protein	NA	NA	NA	NA	NA
WP_044735439.1|4569366_4569720_-	cytochrome c3 family protein	NA	NA	NA	NA	NA
WP_101055228.1|4569746_4571267_-	flavocytochrome c	NA	A0A2P0ZL82	Lactobacillus_phage	24.9	2.5e-21
WP_165565843.1|4571689_4572673_-	oxidoreductase	NA	NA	NA	NA	NA
WP_165565844.1|4572881_4574678_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_071476350.1|4574925_4576446_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_117200635.1|4576489_4577815_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_165565845.1|4578062_4580153_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_165565846.1|4580375_4581146_+	DeoR family transcriptional regulator	NA	NA	NA	NA	NA
WP_101057242.1|4581170_4583000_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	44.7	6.4e-136
WP_110069135.1|4583115_4583952_+|transposase	heteromeric transposase endonuclease subunit TnsA	transposase	NA	NA	NA	NA
WP_165565847.1|4583935_4586011_+|transposase	transposase family protein	transposase	NA	NA	NA	NA
WP_165565848.1|4586007_4587663_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_136374463.1|4587662_4589210_+	transcriptional antiterminator	NA	NA	NA	NA	NA
WP_136374464.1|4589184_4590780_+	transcriptional antiterminator	NA	NA	NA	NA	NA
WP_165565849.1|4593392_4593869_-	small multi-drug export protein	NA	NA	NA	NA	NA
WP_165565850.1|4593869_4596911_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_165565851.1|4596910_4598041_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_110069145.1|4598075_4598666_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_080990006.1|4599203_4599860_+|transposase	heteromeric transposase endonuclease subunit TnsA	transposase	NA	NA	NA	NA
WP_165565852.1|4599843_4601928_+|transposase	transposase family protein	transposase	NA	NA	NA	NA
WP_052815742.1|4601928_4603599_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_165565853.1|4603601_4605107_+|transposase	transposase	transposase	NA	NA	NA	NA
