assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011064785.1_ASM1106478v1	NZ_CP047361	Macrococcus canis strain SD607 chromosome, complete genome	1	473393-474287	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,WYL	csa3,PrimPol,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,WYL,cas3,DEDDh,DinG,cas9	Type III-B,Type III-C,Type III-D,Type III-A	GCTCGAGACCTACCCCGAGAAATAGGGGACGAGAAC,GCTCGAGACCTACCCCGAGAAATAGGGGACGAGAAC,GCTCGAGACCTACCCCGAGAAATAGGGGACGAGAAC	36,36,36	0	0	NA	NA	NA:NA:NA	11,12,12	12	TypeIII-B,TypeIII-C,TypeIII-D,TypeIII-A	csa3,PrimPol,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,WYL,cas3,DEDDh,DinG,cas9	NA|128aa|up_9|NZ_CP047361.1_463632_464016_+,NA|414aa|up_1|NZ_CP047361.1_471199_472441_+,NA	NA|128aa|up_9|NZ_CP047361.1_463632_464016_+	NA	NA|265aa|up_8|NZ_CP047361.1_464197_464992_+	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional	NA|628aa|up_7|NZ_CP047361.1_465025_466909_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|152aa|up_6|NZ_CP047361.1_466910_467366_+	pfam06923, GutM, Glucitol operon activator protein (GutM)	NA|185aa|up_5|NZ_CP047361.1_467367_467922_+	pfam03608, EII-GUT, PTS system enzyme II sorbitol-specific factor	NA|335aa|up_4|NZ_CP047361.1_467928_468933_+	TIGR00825, EIIBC-GUT, PTS system, glucitol/sorbitol-specific, IIBC component	NA|116aa|up_3|NZ_CP047361.1_468954_469302_+	pfam03829, PTSIIA_gutA, PTS system glucitol/sorbitol-specific IIA component	NA|324aa|up_2|NZ_CP047361.1_469729_470701_+	cd09019, galactose_mutarotase_like, galactose mutarotase_like	NA|414aa|up_1|NZ_CP047361.1_471199_472441_+	NA	NA|101aa|up_0|NZ_CP047361.1_472584_472887_-	cd07390, MPP_AQ1575, Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain	cas1|303aa|down_0|NZ_CP047361.1_474314_475223_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|91aa|down_1|NZ_CP047361.1_475222_475495_+	TIGR01573, cas2, CRISPR-associated endonuclease Cas2	cas10|756aa|down_2|NZ_CP047361.1_475548_477816_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|136aa|down_3|NZ_CP047361.1_477820_478228_+	pfam03750, Csm2_III-A, Csm2 Type III-A	csm3gr7|214aa|down_4|NZ_CP047361.1_478227_478869_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|307aa|down_5|NZ_CP047361.1_478877_479798_+	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4	csm5gr7|338aa|down_6|NZ_CP047361.1_479781_480795_+	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	csm6|401aa|down_7|NZ_CP047361.1_480864_482067_+	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	cas6|247aa|down_8|NZ_CP047361.1_482063_482804_+	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|540aa|down_9|NZ_CP047361.1_483503_485123_-	pfam18709, DLP_helical, Dynamin-like helical domain
GCF_011064785.1_ASM1106478v1	NZ_CP047361	Macrococcus canis strain SD607 chromosome, complete genome	2	482915-483446	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,WYL	csa3,PrimPol,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,WYL,cas3,DEDDh,DinG,cas9	Type III-B,Type III-C,Type III-D,Type III-A	ACTCGAGACCTACCCCGAGAATTAGGGGACGAGAAC,ACTCGAGACCTACCCCGAGAATTAGGGGACGAGAAC,ACTCGAGACCTACCCCGAGAATTAGGGGACGAGAAC	36,36,36	0	0	NA	NA	NA:NA:NA	6,7,7	7	TypeIII-B,TypeIII-C,TypeIII-D,TypeIII-A	csa3,PrimPol,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,WYL,cas3,DEDDh,DinG,cas9	NA,NA|51aa|down_3|NZ_CP047361.1_488541_488694_+,NA|51aa|down_4|NZ_CP047361.1_488694_488847_+,NA|207aa|down_5|NZ_CP047361.1_489101_489722_+	NA|101aa|up_9|NZ_CP047361.1_472584_472887_-	cd07390, MPP_AQ1575, Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain	cas1|303aa|up_8|NZ_CP047361.1_474314_475223_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|91aa|up_7|NZ_CP047361.1_475222_475495_+	TIGR01573, cas2, CRISPR-associated endonuclease Cas2	cas10|756aa|up_6|NZ_CP047361.1_475548_477816_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|136aa|up_5|NZ_CP047361.1_477820_478228_+	pfam03750, Csm2_III-A, Csm2 Type III-A	csm3gr7|214aa|up_4|NZ_CP047361.1_478227_478869_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|307aa|up_3|NZ_CP047361.1_478877_479798_+	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4	csm5gr7|338aa|up_2|NZ_CP047361.1_479781_480795_+	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	csm6|401aa|up_1|NZ_CP047361.1_480864_482067_+	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	cas6|247aa|up_0|NZ_CP047361.1_482063_482804_+	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|540aa|down_0|NZ_CP047361.1_483503_485123_-	pfam18709, DLP_helical, Dynamin-like helical domain	NA|661aa|down_1|NZ_CP047361.1_485256_487239_-	cd00882, Ras_like_GTPase, Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases)	WYL|317aa|down_2|NZ_CP047361.1_487334_488285_-	pfam13280, WYL, WYL domain	NA|51aa|down_3|NZ_CP047361.1_488541_488694_+	NA	NA|51aa|down_4|NZ_CP047361.1_488694_488847_+	NA	NA|207aa|down_5|NZ_CP047361.1_489101_489722_+	NA	NA|175aa|down_6|NZ_CP047361.1_489829_490354_+	pfam07563, DUF1541, Protein of unknown function (DUF1541)	NA|375aa|down_7|NZ_CP047361.1_490566_491691_+	pfam07501, G5, G5 domain	NA|396aa|down_8|NZ_CP047361.1_491736_492924_-	cd08021, M20_Acy1_YhaA-like, M20 Peptidase aminoacylase 1 subfamily, includes Bacillus subtilis YhaA and Staphylococcus aureus amidohydrolase, SACOL0085	NA|370aa|down_9|NZ_CP047361.1_493124_494234_+	cd01941, YeiC_kinase_like, YeiC-like sugar kinase
GCF_011064785.1_ASM1106478v1	NZ_CP047361	Macrococcus canis strain SD607 chromosome, complete genome	3	1956100-1960071	3,3,3,4,5,6,7	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR,PILER-CR,PILER-CR	no	csa3,cas2,cas1,cas9	csa3,PrimPol,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,WYL,cas3,DEDDh,DinG,cas9	Type II-C,Type II-B,,Type II-A	GTTTCACTTCATTCTAAAAGATCATAGTTCTAAAAC,GTTTCACTTCATTCTAAAAGATCATAGTTCTAAAAC,GTTTCACTTCATTCTAAAAGATCATAGTTCTAAAACTTGA,ATATGTTTCACTTCATTCTAAAAGATCATAGTTCTAAAACC,TGGCTAAAAGTTTCACTTCATTCTAAAAGATCATAGTTCTAAAAC,GTTTCACTTCATTCTAAAAGATCATAGTTCTAAAAC,GTTTCACTTCATTCTAAAAGATCATAGTTCTAAAAC	36,36,40,41,45,36,36	0	0	NA	NA	NA:NA:NA:NA:NA:NA:NA	60,60,25,25,25,25,25	60	,TypeII-C,TypeII-B,TypeII-A	csa3,PrimPol,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,WYL,cas3,DEDDh,DinG,cas9	NA|324aa|up_8|NZ_CP047361.1_1947750_1948722_-,NA|140aa|up_6|NZ_CP047361.1_1950675_1951095_-,NA|180aa|up_5|NZ_CP047361.1_1951133_1951673_-,NA|120aa|up_4|NZ_CP047361.1_1951715_1952075_-,NA|303aa|up_3|NZ_CP047361.1_1952156_1953065_-,NA|376aa|up_2|NZ_CP047361.1_1953045_1954173_-,NA|126aa|up_0|NZ_CP047361.1_1955045_1955423_-,NA|282aa|down_0|NZ_CP047361.1_1960157_1961003_-,NA|386aa|down_4|NZ_CP047361.1_1966880_1968038_+,NA|61aa|down_7|NZ_CP047361.1_1971009_1971192_-,NA|153aa|down_8|NZ_CP047361.1_1971207_1971666_-	NA|168aa|up_9|NZ_CP047361.1_1947257_1947761_-	pfam05656, DUF805, Protein of unknown function (DUF805)	NA|324aa|up_8|NZ_CP047361.1_1947750_1948722_-	NA	NA|574aa|up_7|NZ_CP047361.1_1948847_1950569_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|140aa|up_6|NZ_CP047361.1_1950675_1951095_-	NA	NA|180aa|up_5|NZ_CP047361.1_1951133_1951673_-	NA	NA|120aa|up_4|NZ_CP047361.1_1951715_1952075_-	NA	NA|303aa|up_3|NZ_CP047361.1_1952156_1953065_-	NA	NA|376aa|up_2|NZ_CP047361.1_1953045_1954173_-	NA	NA|230aa|up_1|NZ_CP047361.1_1954254_1954944_-	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|126aa|up_0|NZ_CP047361.1_1955045_1955423_-	NA	NA|282aa|down_0|NZ_CP047361.1_1960157_1961003_-	NA	cas2|103aa|down_1|NZ_CP047361.1_1960999_1961308_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|292aa|down_2|NZ_CP047361.1_1961334_1962210_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1342aa|down_3|NZ_CP047361.1_1962206_1966232_-	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	NA|386aa|down_4|NZ_CP047361.1_1966880_1968038_+	NA	NA|407aa|down_5|NZ_CP047361.1_1968056_1969277_+	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	NA|405aa|down_6|NZ_CP047361.1_1969398_1970613_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|61aa|down_7|NZ_CP047361.1_1971009_1971192_-	NA	NA|153aa|down_8|NZ_CP047361.1_1971207_1971666_-	NA	NA|70aa|down_9|NZ_CP047361.1_1971655_1971865_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]
GCF_011064785.1_ASM1106478v1	NZ_CP047361	Macrococcus canis strain SD607 chromosome, complete genome	4	2102244-2103425	4	CRT	no		csa3,PrimPol,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,WYL,cas3,DEDDh,DinG,cas9	Orphan	NACTGAATCTGTTACTGA	18	9	13	2102790-2102807|2102874-2102891|2102874-2102891|2102874-2102891|2102874-2102891|2102874-2102891|2102910-2102927|2102946-2102963|2102982-2102999|2103066-2103095|2103114-2103131|2103282-2103299|2103390-2103407	NZ_CP047361.1_2103414-2103431|NZ_CP047361.1_2102202-2102219|NZ_CP047361.1_2102226-2102243|NZ_CP047361.1_184635-184618|NZ_CP047361.1_2102190-2102207|NZ_CP047361.1_2102238-2102255|NZ_CP047361.1_2102190-2102207|NZ_CP047361.1_2102226-2102243|NZ_CP047361.1_2103414-2103431|NZ_CP047361.1_2103402-2103431|NZ_CP047361.1_2103414-2103431|NZ_CP047361.1_2102226-2102243|NZ_CP047361.1_2103414-2103431	NA	20	20	Orphan	csa3,PrimPol,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,WYL,cas3,DEDDh,DinG,cas9	NA|48aa|up_5|NZ_CP047361.1_2086688_2086832_-,NA|66aa|up_3|NZ_CP047361.1_2093931_2094129_+,NA	NA|317aa|up_9|NZ_CP047361.1_2082810_2083761_-	PRK09379, PRK09379, LytR family transcriptional regulator	NA|205aa|up_8|NZ_CP047361.1_2083883_2084498_-	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]	NA|145aa|up_7|NZ_CP047361.1_2084638_2085073_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|482aa|up_6|NZ_CP047361.1_2085101_2086547_-	TIGR00931, Uncharacterized_Na+/H+_antiporter_HI_1107, Na+/H+ antiporter NhaC	NA|48aa|up_5|NZ_CP047361.1_2086688_2086832_-	NA	NA|2127aa|up_4|NZ_CP047361.1_2087160_2093541_-	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD	NA|66aa|up_3|NZ_CP047361.1_2093931_2094129_+	NA	NA|199aa|up_2|NZ_CP047361.1_2094402_2094999_+	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|438aa|up_1|NZ_CP047361.1_2095102_2096416_-	TIGR02919, conserved_hypothetical_protein, accessory Sec system glycosyltransferase GtfB	NA|500aa|up_0|NZ_CP047361.1_2096408_2097908_-	TIGR02918, lipopolysaccharide_biosynthesis_protein, accessory Sec system glycosylation protein GtfA	NA|2390aa|down_0|NZ_CP047361.1_2105913_2113083_-	NF000535, MSCRAMM_SdrC, MSCRAMM family adhesin SdrC	NA|187aa|down_1|NZ_CP047361.1_2113300_2113861_-	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|442aa|down_2|NZ_CP047361.1_2114060_2115386_-	TIGR02919, conserved_hypothetical_protein, accessory Sec system glycosyltransferase GtfB	NA|504aa|down_3|NZ_CP047361.1_2115382_2116894_-	TIGR02918, lipopolysaccharide_biosynthesis_protein, accessory Sec system glycosylation protein GtfA	NA|796aa|down_4|NZ_CP047361.1_2116903_2119291_-	TIGR03714, Protein_translocase_subunit_SecA_2, accessory Sec system translocase SecA2	NA|156aa|down_5|NZ_CP047361.1_2119305_2119773_-	TIGR03711, acc_sec_asp3, accessory Sec system protein Asp3	NA|512aa|down_6|NZ_CP047361.1_2119774_2121310_-	TIGR03712, acc_sec_asp2, accessory Sec system protein Asp2	NA|508aa|down_7|NZ_CP047361.1_2121293_2122817_-	TIGR03713, acc_sec_asp1, accessory Sec system protein Asp1	NA|408aa|down_8|NZ_CP047361.1_2122826_2124050_-	PRK12417, secY, preprotein translocase subunit SecY; Reviewed	NA|2821aa|down_9|NZ_CP047361.1_2124145_2132608_-	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD
GCF_011064785.1_ASM1106478v1	NZ_CP047361	Macrococcus canis strain SD607 chromosome, complete genome	5	2124672-2124771	4	CRISPRCasFinder	no		csa3,PrimPol,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,WYL,cas3,DEDDh,DinG,cas9	Orphan	TCACTGATTGATGTCGATGTTGACGTACTTCCAC	34	0	0	NA	NA	NA	1	1	Orphan	csa3,PrimPol,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,WYL,cas3,DEDDh,DinG,cas9	NA,NA|461aa|down_5|NZ_CP047361.1_2156745_2158128_-,NA|89aa|down_8|NZ_CP047361.1_2160229_2160496_+	NA|2540aa|up_9|NZ_CP047361.1_2098013_2105633_-	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD	NA|2390aa|up_8|NZ_CP047361.1_2105913_2113083_-	NF000535, MSCRAMM_SdrC, MSCRAMM family adhesin SdrC	NA|187aa|up_7|NZ_CP047361.1_2113300_2113861_-	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|442aa|up_6|NZ_CP047361.1_2114060_2115386_-	TIGR02919, conserved_hypothetical_protein, accessory Sec system glycosyltransferase GtfB	NA|504aa|up_5|NZ_CP047361.1_2115382_2116894_-	TIGR02918, lipopolysaccharide_biosynthesis_protein, accessory Sec system glycosylation protein GtfA	NA|796aa|up_4|NZ_CP047361.1_2116903_2119291_-	TIGR03714, Protein_translocase_subunit_SecA_2, accessory Sec system translocase SecA2	NA|156aa|up_3|NZ_CP047361.1_2119305_2119773_-	TIGR03711, acc_sec_asp3, accessory Sec system protein Asp3	NA|512aa|up_2|NZ_CP047361.1_2119774_2121310_-	TIGR03712, acc_sec_asp2, accessory Sec system protein Asp2	NA|508aa|up_1|NZ_CP047361.1_2121293_2122817_-	TIGR03713, acc_sec_asp1, accessory Sec system protein Asp1	NA|408aa|up_0|NZ_CP047361.1_2122826_2124050_-	PRK12417, secY, preprotein translocase subunit SecY; Reviewed	NA|495aa|down_0|NZ_CP047361.1_2132919_2134404_+	COG3227, LasB, Zinc metalloprotease (elastase) [Amino acid transport and metabolism]	NA|3696aa|down_1|NZ_CP047361.1_2134499_2145587_-	pfam17936, Big_6, Bacterial Ig domain	NA|451aa|down_2|NZ_CP047361.1_2146049_2147402_-	pfam05598, DUF772, Transposase domain (DUF772)	NA|374aa|down_3|NZ_CP047361.1_2147589_2148711_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|2451aa|down_4|NZ_CP047361.1_2148969_2156322_-	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD	NA|461aa|down_5|NZ_CP047361.1_2156745_2158128_-	NA	NA|320aa|down_6|NZ_CP047361.1_2158302_2159262_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|206aa|down_7|NZ_CP047361.1_2159400_2160018_+	pfam00565, SNase, Staphylococcal nuclease homolog	NA|89aa|down_8|NZ_CP047361.1_2160229_2160496_+	NA	NA|349aa|down_9|NZ_CP047361.1_2160573_2161620_-	COG3942, COG3942, Surface antigen [General function prediction only]
