The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP049161	Pseudomonas aeruginosa strain MS14403 chromosome, complete genome	6282181	635939	689251	6282181	tail,tRNA,holin	Pseudomonas_phage(47.83%)	52	NA	NA
WP_003129196.1|635939_636965_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.1	8.3e-109
WP_003085061.1|637043_637613_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003099587.1|637696_638050_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_003137363.1|638040_638583_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_003099584.1|638555_639788_-	multifunctional CCA addition/repair protein	NA	A0A076G5T8	Escherichia_phage	43.1	2.6e-77
WP_003109021.1|639831_640338_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_171978447.1|640431_641985_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_003099579.1|641981_643253_-	YeaH/YhbH family protein	NA	A0A140HLI1	Bacillus_phage	37.2	4.2e-09
WP_003085078.1|643353_645276_-	PrkA family serine protein kinase	NA	NA	NA	NA	NA
WP_003099577.1|645554_645887_-	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA	NA
WP_010792011.1|645930_646782_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	A0A2R4ALP3	Aeromonas_phage	44.2	2.4e-08
WP_003085085.1|646781_647162_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003161932.1|647198_648005_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_003117956.1|648120_649107_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
WP_003109024.1|649103_650396_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_016252922.1|650376_653169_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_016252923.1|653295_654312_+	phosphotransferase	NA	NA	NA	NA	NA
WP_025324548.1|654308_654983_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003099547.1|654984_655743_+	DnaJ domain-containing protein	NA	NA	NA	NA	NA
WP_003099546.1|655743_656805_-	alpha/beta hydrolase family protein	NA	NA	NA	NA	NA
WP_003142788.1|656956_659350_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_003085103.1|659395_660028_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_016252925.1|660156_661191_+	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_016252926.1|661424_662534_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.4	7.8e-28
WP_003099539.1|662589_663636_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_016252927.1|663750_664998_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003085119.1|665103_665934_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003085122.1|666057_666732_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003099532.1|666731_667550_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_016252928.1|667622_669101_+	anthranilate synthase component I	NA	NA	NA	NA	NA
WP_003121843.1|669417_669732_-	pyocin activator PrtN family protein	NA	NA	NA	NA	NA
WP_003113202.1|669831_670602_-	helix-turn-helix transcriptional regulator	NA	A0A1B0Z078	Pseudomonas_phage	59.1	1.4e-71
WP_003085132.1|671059_671260_+	repressor PtrB	NA	W6ATC1	Enterobacter_phage	58.3	3.7e-05
WP_003118907.1|671307_671667_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017002346.1|672029_672473_+|holin	holin	holin	B5TK61	Pseudomonas_phage	51.8	6.5e-26
WP_003113192.1|672488_673118_+	glycoside hydrolase family 19 protein	NA	A0A125RNP1	Pseudomonas_phage	78.0	1.6e-86
WP_033946488.1|673114_673477_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003118919.1|673473_673731_+	hypothetical protein	NA	A0A125RNP3	Pseudomonas_phage	64.6	8.3e-18
WP_003113190.1|674046_674541_+	hypothetical protein	NA	A0A286S1Q8	Klebsiella_phage	56.5	1.4e-45
WP_003113189.1|674552_674900_+|tail	phage tail assembly chaperone family protein, TAC	tail	NA	NA	NA	NA
WP_003113188.1|674929_675184_+	hypothetical protein	NA	A0A2H4PI34	Pseudomonas_phage	38.4	6.3e-10
WP_034018819.1|675230_677069_+|tail	phage tail tape measure protein	tail	A0A0S2SYD9	Pseudomonas_phage	35.8	3.4e-28
WP_003113186.1|677061_677403_+|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	40.0	1.4e-17
WP_003118922.1|677410_678106_+|tail	phage minor tail protein L	tail	A0A1B0VNE0	Pseudomonas_phage	50.2	1.5e-69
WP_003129219.1|678108_678879_+	C40 family peptidase	NA	A0A2D1GNP8	Pseudomonas_phage	55.6	5.5e-81
WP_003113183.1|678933_679536_+|tail	tail assembly protein	tail	A0A1V0E8A0	Vibrio_phage	57.8	2.2e-53
WP_034025366.1|679594_683263_+|tail	phage tail protein	tail	A0A0S2SYC5	Pseudomonas_phage	54.5	0.0e+00
WP_124156586.1|683561_684236_+	hypothetical protein	NA	C8ZKR8	Pseudomonas_phage	36.2	1.3e-30
WP_003117977.1|686070_686355_+	hypothetical protein	NA	A0A0A7DJU8	Pseudomonas_phage	64.5	7.8e-25
WP_003101640.1|686761_687367_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	65.8	6.0e-75
WP_003085203.1|687368_688418_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	57.8	1.8e-111
WP_003085205.1|688414_689251_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	56.9	2.1e-70
>prophage 2
NZ_CP049161	Pseudomonas aeruginosa strain MS14403 chromosome, complete genome	6282181	1434266	1443295	6282181		Bacillus_phage(33.33%)	8	NA	NA
WP_003098558.1|1434266_1434902_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.3	1.0e-40
WP_003115226.1|1434947_1435841_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A0S2SXL7	Bacillus_phage	34.3	3.0e-06
WP_003113871.1|1435945_1436950_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.3	7.0e-36
WP_003092272.1|1437376_1437700_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_003113873.1|1437766_1440334_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	22.1	3.2e-24
WP_003092265.1|1440459_1441467_-	TolB family protein	NA	NA	NA	NA	NA
WP_003092262.1|1441614_1442121_+	CinA family protein	NA	B5TK85	Pseudomonas_phage	76.0	8.1e-57
WP_003092260.1|1442254_1443295_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	59.5	1.5e-113
>prophage 3
NZ_CP049161	Pseudomonas aeruginosa strain MS14403 chromosome, complete genome	6282181	2524259	2531153	6282181	tRNA	uncultured_Caudovirales_phage(83.33%)	9	NA	NA
WP_003097631.1|2524259_2525540_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.4	8.2e-98
WP_003113366.1|2525541_2526939_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_171978554.1|2526943_2527918_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_003097625.1|2528005_2528989_-	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	74.0	3.5e-141
WP_003090393.1|2528985_2529321_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	69.4	3.3e-38
WP_003116720.1|2529317_2529623_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA	NA
WP_003090389.1|2529622_2529982_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	61.7	1.4e-34
WP_003090387.1|2529978_2530374_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	72.1	2.7e-47
WP_003090386.1|2530484_2531153_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	82.1	1.5e-90
>prophage 4
NZ_CP049161	Pseudomonas aeruginosa strain MS14403 chromosome, complete genome	6282181	4225674	4234538	6282181	capsid,integrase,tRNA	Pseudomonas_phage(90.0%)	12	4223893:4223909	4230515:4230531
4223893:4223909	attL	GCTGGCCTTCTTCGGCG	NA	NA	NA	NA
WP_003082462.1|4225674_4226499_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	73.7	1.4e-106
WP_012614375.1|4226604_4227621_-|integrase	tyrosine-type recombinase/integrase	integrase	Q56VN7	Pseudomonas_phage	99.7	5.0e-191
WP_171978634.1|4227620_4228919_-	hypothetical protein	NA	Q56VN8	Pseudomonas_phage	99.1	4.2e-259
WP_058198842.1|4229147_4230431_-	hypothetical protein	NA	Q56VN9	Pseudomonas_phage	98.6	2.5e-235
WP_003114150.1|4230434_4230791_-	DUF2523 domain-containing protein	NA	Q56VP0	Pseudomonas_phage	100.0	7.9e-59
4230515:4230531	attR	CGCCGAAGAAGGCCAGC	NA	NA	NA	NA
WP_171978635.1|4230795_4232133_-	attachment protein	NA	Q56VP1	Pseudomonas_phage	96.0	2.4e-156
WP_003140506.1|4232286_4232535_-|capsid	major capsid protein	capsid	Q56VP2	Pseudomonas_phage	100.0	2.1e-34
WP_003115979.1|4232547_4232799_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109843822.1|4232920_4233355_-	DNA-binding protein	NA	Q56VP5	Pseudomonas_phage	99.3	8.4e-63
WP_171978636.1|4233870_4234161_-	DUF5447 family protein	NA	Q56VP7	Pseudomonas_phage	96.9	1.3e-54
WP_153962791.1|4234164_4234323_-	hypothetical protein	NA	NA	NA	NA	NA
WP_022581007.1|4234322_4234538_-	DNA-binding protein	NA	Q56VP9	Pseudomonas_phage	93.0	1.4e-34
>prophage 1
NZ_CP049162	Pseudomonas aeruginosa strain MS14403 plasmid pMS14403A, complete sequence	50130	36109	42431	50130		Pseudomonas_phage(50.0%)	10	NA	NA
WP_171978752.1|36109_36589_-	hypothetical protein	NA	A0A2D1GML8	Marinobacter_phage	51.0	8.9e-05
WP_031757131.1|37041_37338_-	hypothetical protein	NA	NA	NA	NA	NA
WP_034027474.1|37633_37873_-	anti-CRISPR protein	NA	A0A0U5KRA8	unidentified_phage	96.2	4.1e-35
WP_058133867.1|37885_38299_-	anti-CRISPR protein AcrF3	NA	L7P7R7	Pseudomonas_phage	97.8	2.5e-72
WP_023131919.1|38321_38624_-	anti-CRISPR protein AcrE1	NA	L7P7L6	Pseudomonas_phage	99.0	6.3e-49
WP_058133869.1|38732_39410_-	SOS response-associated peptidase	NA	A0A2K8I970	Pseudomonas_phage	89.3	1.1e-117
WP_171978753.1|39730_39928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003142924.1|40010_40202_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171978754.1|40301_41363_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_031655076.1|41636_42431_-	DUF3560 domain-containing protein	NA	A0A2K9V3V9	Faecalibacterium_phage	32.6	1.2e-17
