assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011045235.1_ASM1104523v1	NZ_CP049204	Escherichia coli strain PapM-32-1 chromosome, complete genome	1	1058534-1059355	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	Unclear	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	12,13,13	13	Unclear	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	NA,NA	NA|83aa|up_9|NZ_CP049204.1_1049026_1049275_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_8|NZ_CP049204.1_1049274_1049610_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_7|NZ_CP049204.1_1049680_1050472_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_6|NZ_CP049204.1_1050699_1052337_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_5|NZ_CP049204.1_1052424_1053723_+	PRK00077, eno, enolase; Provisional	NA|300aa|up_4|NZ_CP049204.1_1053782_1054682_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|383aa|up_3|NZ_CP049204.1_1054678_1055827_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|298aa|up_2|NZ_CP049204.1_1055841_1056735_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|201aa|up_1|NZ_CP049204.1_1056748_1057351_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|224aa|up_0|NZ_CP049204.1_1057523_1058195_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP049204.1_1059931_1061410_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP049204.1_1061436_1062714_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP049204.1_1063032_1063818_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP049204.1_1063887_1065342_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP049204.1_1065363_1066773_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP049204.1_1066750_1067530_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|298aa|down_6|NZ_CP049204.1_1067493_1068387_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP049204.1_1068533_1069109_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP049204.1_1069125_1069386_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP049204.1_1069376_1070648_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_011045235.1_ASM1104523v1	NZ_CP049204	Escherichia coli strain PapM-32-1 chromosome, complete genome	2	1084993-1085265	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	3,4,4	4	TypeI-E	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	NA,NA	NA|245aa|up_9|NZ_CP049204.1_1074991_1075726_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP049204.1_1075990_1076143_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP049204.1_1076335_1079035_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP049204.1_1079131_1080694_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP049204.1_1080690_1081227_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_4|NZ_CP049204.1_1081241_1082297_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP049204.1_1082307_1083054_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP049204.1_1083035_1083686_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP049204.1_1083682_1084606_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP049204.1_1084602_1084896_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP049204.1_1085285_1086323_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP049204.1_1086574_1087483_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP049204.1_1087484_1088912_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP049204.1_1088911_1089517_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP049204.1_1089566_1089890_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP049204.1_1090083_1090395_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP049204.1_1090413_1091124_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP049204.1_1091123_1091603_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP049204.1_1091599_1092649_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP049204.1_1092629_1093391_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_011045235.1_ASM1104523v1	NZ_CP049204	Escherichia coli strain PapM-32-1 chromosome, complete genome	3	1602071-1602176	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	Orphan	CCGAGCCGTAGGCCGGATTAGGCGTT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	NA|357aa|up_5|NZ_CP049204.1_1596050_1597121_-,NA	NA|420aa|up_9|NZ_CP049204.1_1590238_1591498_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_8|NZ_CP049204.1_1591487_1593116_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_7|NZ_CP049204.1_1593388_1594747_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_6|NZ_CP049204.1_1594751_1595828_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|357aa|up_5|NZ_CP049204.1_1596050_1597121_-	NA	NA|293aa|up_4|NZ_CP049204.1_1597584_1598463_-	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|397aa|up_3|NZ_CP049204.1_1598614_1599805_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|217aa|up_2|NZ_CP049204.1_1599885_1600536_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP049204.1_1600589_1600844_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP049204.1_1600843_1601974_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP049204.1_1602200_1604486_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP049204.1_1605181_1608934_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP049204.1_1609074_1609797_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP049204.1_1609943_1612571_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP049204.1_1612719_1614408_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP049204.1_1614404_1615028_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|NZ_CP049204.1_1615171_1619566_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|NZ_CP049204.1_1619566_1621216_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|NZ_CP049204.1_1621220_1621997_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|950aa|down_9|NZ_CP049204.1_1622271_1625121_+	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC
GCF_011045235.1_ASM1104523v1	NZ_CP049204	Escherichia coli strain PapM-32-1 chromosome, complete genome	4	2191501-2191624	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	NA,NA|30aa|down_7|NZ_CP049204.1_2200520_2200610_+	NA|471aa|up_9|NZ_CP049204.1_2180955_2182368_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP049204.1_2182923_2183133_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP049204.1_2183588_2184215_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP049204.1_2184235_2186338_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP049204.1_2186350_2186989_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP049204.1_2187052_2187721_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP049204.1_2187717_2188503_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP049204.1_2188506_2189319_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP049204.1_2189330_2190935_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP049204.1_2191060_2191366_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP049204.1_2191938_2193195_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP049204.1_2193235_2194609_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP049204.1_2194823_2195465_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP049204.1_2195504_2196653_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP049204.1_2196943_2198155_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP049204.1_2198267_2199200_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP049204.1_2199196_2200222_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP049204.1_2200520_2200610_+	NA	NA|390aa|down_8|NZ_CP049204.1_2200775_2201945_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP049204.1_2202090_2202672_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_011045235.1_ASM1104523v1	NZ_CP049204	Escherichia coli strain PapM-32-1 chromosome, complete genome	5	2893173-2893264	5	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	NA|70aa|up_9|NZ_CP049204.1_2882424_2882634_-,NA	NA|70aa|up_9|NZ_CP049204.1_2882424_2882634_-	NA	NA|1321aa|up_8|NZ_CP049204.1_2882688_2886651_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP049204.1_2886690_2887329_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP049204.1_2887616_2888708_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP049204.1_2888707_2889400_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP049204.1_2889411_2889798_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP049204.1_2889805_2890606_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP049204.1_2890615_2891206_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP049204.1_2891216_2891711_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP049204.1_2891731_2893060_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP049204.1_2893687_2894284_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP049204.1_2894304_2894532_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP049204.1_2894569_2895811_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP049204.1_2896102_2897359_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP049204.1_2897618_2898539_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP049204.1_2898538_2898844_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP049204.1_2898936_2899536_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP049204.1_2899532_2902079_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP049204.1_2902078_2903251_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP049204.1_2903380_2904073_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_011045235.1_ASM1104523v1	NZ_CP049204	Escherichia coli strain PapM-32-1 chromosome, complete genome	6	3025112-3025260	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	Orphan	TTTCTAAGCTGCCTGTACGGCAGTGAACT	29	0	0	NA	NA	I-F	2	2	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	NA,NA	NA|431aa|up_9|NZ_CP049204.1_3009937_3011230_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|NZ_CP049204.1_3011320_3012664_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|NZ_CP049204.1_3012674_3013286_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1369aa|up_6|NZ_CP049204.1_3013440_3017547_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|NZ_CP049204.1_3017681_3018176_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|NZ_CP049204.1_3018719_3019685_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP049204.1_3019807_3021574_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP049204.1_3021574_3023296_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP049204.1_3023337_3024042_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP049204.1_3024326_3024545_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|NZ_CP049204.1_3025471_3027748_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|NZ_CP049204.1_3027778_3028099_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|NZ_CP049204.1_3028421_3028646_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|NZ_CP049204.1_3028718_3030665_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|NZ_CP049204.1_3030661_3031777_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|317aa|down_5|NZ_CP049204.1_3031933_3032884_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|NZ_CP049204.1_3032880_3034539_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|NZ_CP049204.1_3034964_3035660_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_8|NZ_CP049204.1_3035993_3036893_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_9|NZ_CP049204.1_3037036_3038689_+	PRK05290, PRK05290, hybrid cluster protein; Provisional
GCF_011045235.1_ASM1104523v1	NZ_CP049204	Escherichia coli strain PapM-32-1 chromosome, complete genome	7	4026938-4027073	3	PILER-CR	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	Orphan	TAAATCACCAATATTGAAAA	20	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	NA,NA	NA|105aa|up_9|NZ_CP049204.1_4018309_4018624_-	pfam01845, CcdB, CcdB protein	NA|78aa|up_8|NZ_CP049204.1_4018626_4018860_-	COG5302, COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid [General function prediction only]	NA|160aa|up_7|NZ_CP049204.1_4018945_4019425_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP049204.1_4019616_4021479_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP049204.1_4021471_4022002_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP049204.1_4022112_4023444_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP049204.1_4023502_4023790_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP049204.1_4023786_4025073_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP049204.1_4025123_4026065_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP049204.1_4026079_4026850_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP049204.1_4027322_4028837_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP049204.1_4028867_4030010_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP049204.1_4030138_4031356_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|NZ_CP049204.1_4031429_4032983_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|NZ_CP049204.1_4033091_4033877_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|NZ_CP049204.1_4033882_4034473_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|NZ_CP049204.1_4034558_4034954_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|NZ_CP049204.1_4035214_4038436_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|NZ_CP049204.1_4038453_4039602_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|NZ_CP049204.1_4040057_4040879_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
GCF_011045235.1_ASM1104523v1	NZ_CP049204	Escherichia coli strain PapM-32-1 chromosome, complete genome	8	4236722-4236871	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DEDDh,DinG,RT,c2c9_V-U4	NA|450aa|up_7|NZ_CP049204.1_4225517_4226867_-,NA|599aa|down_6|NZ_CP049204.1_4243974_4245771_-	NA|846aa|up_9|NZ_CP049204.1_4222144_4224682_+	pfam02384, N6_Mtase, N-6 DNA Methylase	NA|263aa|up_8|NZ_CP049204.1_4224668_4225457_+	TIGR02646, Hypothetical_protein_SMc04429, TIGR02646 family protein	NA|450aa|up_7|NZ_CP049204.1_4225517_4226867_-	NA	NA|354aa|up_6|NZ_CP049204.1_4226922_4227984_-	pfam04245, NA37, 37-kD nucleoid-associated bacterial protein	NA|418aa|up_5|NZ_CP049204.1_4228180_4229434_-	PRK09692, PRK09692, integrase; Provisional	NA|340aa|up_4|NZ_CP049204.1_4229912_4230932_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP049204.1_4231061_4232564_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP049204.1_4232724_4233807_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP049204.1_4233806_4234907_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP049204.1_4235173_4236685_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP049204.1_4237038_4237482_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP049204.1_4237481_4240337_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP049204.1_4240391_4241588_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP049204.1_4241780_4242284_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP049204.1_4242329_4242746_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|338aa|down_5|NZ_CP049204.1_4242907_4243921_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|599aa|down_6|NZ_CP049204.1_4243974_4245771_-	NA	NA|151aa|down_7|NZ_CP049204.1_4245893_4246346_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_8|NZ_CP049204.1_4246490_4247084_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|238aa|down_9|NZ_CP049204.1_4247154_4247868_+	PRK12742, PRK12742, SDR family oxidoreductase
