assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010917675.1_ASM1091767v1	NZ_CP048599	Helicobacter pylori strain GCT 97 chromosome, complete genome	1	8398-8630	1	CRT	no		cas3,cas2,DEDDh	Orphan	CAAATAAGAGTGAGATAGAGTTAGAACAAGAAAGACAGAAGACA	44	3	11	8442-8460|8442-8460|8442-8460|8442-8460|8442-8460|8442-8460|8442-8460|8505-8523|8568-8586|8568-8586|8568-8586	NZ_CP048599.1_1214602-1214584|NZ_CP048599.1_1214527-1214509|NZ_CP048599.1_1214548-1214530|NZ_CP048599.1_1214623-1214605|NZ_CP048599.1_1214644-1214626|NZ_CP048599.1_1214686-1214668|NZ_CP048599.1_1214707-1214689|NZ_CP048599.1_1214782-1214764|NZ_CP048599.1_334328-334310|NZ_CP048599.1_364079-364061|NZ_CP048599.1_1134904-1134886	NA	3	3	Orphan	cas3,cas2,DEDDh	NA,NA|99aa|down_4|NZ_CP048599.1_16133_16430_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|144aa|up_6|NZ_CP048599.1_175_607_-	pfam06518, DUF1104, Protein of unknown function (DUF1104)	NA|287aa|up_5|NZ_CP048599.1_959_1820_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|117aa|up_4|NZ_CP048599.1_2019_2370_-	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|65aa|up_3|NZ_CP048599.1_2464_2659_-	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|204aa|up_2|NZ_CP048599.1_2639_3251_-	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|613aa|up_1|NZ_CP048599.1_3247_5086_-	PRK12305, thrS, threonyl-tRNA synthetase; Reviewed	NA|811aa|up_0|NZ_CP048599.1_5462_7895_+	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated	NA|309aa|down_0|NZ_CP048599.1_9339_10266_-	COG0731, COG0731, Fe-S oxidoreductases [Energy production and conversion]	NA|737aa|down_1|NZ_CP048599.1_10258_12469_-	PRK05582, PRK05582, type I DNA topoisomerase	NA|515aa|down_2|NZ_CP048599.1_12634_14179_+	PRK13588, PRK13588, flagellin B; Provisional	NA|628aa|down_3|NZ_CP048599.1_14239_16123_+	COG2604, COG2604, Uncharacterized protein conserved in bacteria [Function unknown]	NA|99aa|down_4|NZ_CP048599.1_16133_16430_-	NA	NA|213aa|down_5|NZ_CP048599.1_16450_17089_-	PRK05834, PRK05834, hypothetical protein; Provisional	NA|277aa|down_6|NZ_CP048599.1_17299_18130_+	PRK03911, PRK03911, HrcA family transcriptional regulator	NA|191aa|down_7|NZ_CP048599.1_18129_18702_+	PRK14149, PRK14149, heat shock protein GrpE; Provisional	NA|621aa|down_8|NZ_CP048599.1_18732_20595_+	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|306aa|down_9|NZ_CP048599.1_21490_22408_+	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase
GCF_010917675.1_ASM1091767v1	NZ_CP048599	Helicobacter pylori strain GCT 97 chromosome, complete genome	2	469361-469519	1	PILER-CR	no		cas3,cas2,DEDDh	Orphan	GCTATTAAAATTATAAGTGCCTTGATTGAAGTTGCTGTTATCAAAGCT	48	0	0	NA	NA	I-B	2	2	Orphan	cas3,cas2,DEDDh	NA|105aa|up_9|NZ_CP048599.1_452529_452844_-,NA|163aa|up_7|NZ_CP048599.1_454344_454833_-,NA|206aa|down_9|NZ_CP048599.1_488585_489203_-	NA|105aa|up_9|NZ_CP048599.1_452529_452844_-	NA	NA|496aa|up_8|NZ_CP048599.1_452845_454333_-	pfam18712, DUF5644, Family of unknown function (DUF5644)	NA|163aa|up_7|NZ_CP048599.1_454344_454833_-	NA	NA|579aa|up_6|NZ_CP048599.1_454817_456554_-	TIGR02290, oligoendopeptidase_F, oligoendopeptidase, pepF/M3 family	NA|417aa|up_5|NZ_CP048599.1_456651_457902_-	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|187aa|up_4|NZ_CP048599.1_458222_458783_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|247aa|up_3|NZ_CP048599.1_459008_459749_+	cd13539, PBP2_AvModA, Substrate binding domain of ModA/WtpA from Azotobacter vinelandii and its closest homologs;the type 2 periplasmic binding protein fold	NA|225aa|up_2|NZ_CP048599.1_459771_460446_+	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism]	NA|266aa|up_1|NZ_CP048599.1_460442_461240_+	COG1118, CysA, ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|464aa|up_0|NZ_CP048599.1_461354_462746_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|333aa|down_0|NZ_CP048599.1_470418_471417_-	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|231aa|down_1|NZ_CP048599.1_471561_472254_+	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|1086aa|down_2|NZ_CP048599.1_472353_475611_+	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|144aa|down_3|NZ_CP048599.1_475615_476047_+	pfam01300, Sua5_yciO_yrdC, Telomere recombination	NA|515aa|down_4|NZ_CP048599.1_478995_480540_+	pfam02521, HP_OMP_2, Putative outer membrane protein	NA|532aa|down_5|NZ_CP048599.1_481401_482997_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|519aa|down_6|NZ_CP048599.1_483018_484575_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|677aa|down_7|NZ_CP048599.1_485419_487450_-	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|384aa|down_8|NZ_CP048599.1_487453_488605_-	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|206aa|down_9|NZ_CP048599.1_488585_489203_-	NA
GCF_010917675.1_ASM1091767v1	NZ_CP048599	Helicobacter pylori strain GCT 97 chromosome, complete genome	3	1219184-1219260	1	CRISPRCasFinder	no	DEDDh	cas3,cas2,DEDDh	Unclear	AGGTTTTTTAGCGTCTTTTTTGT	23	1	2	1219207-1219237|1219207-1219237	NZ_CP048599.1_672335-672365|NZ_CP048599.1_672389-672419	NA	1	1	Orphan	cas3,cas2,DEDDh	NA,NA|68aa|down_0|NZ_CP048599.1_1219541_1219745_-,NA|99aa|down_5|NZ_CP048599.1_1223335_1223632_-	NA|444aa|up_9|NZ_CP048599.1_1206663_1207995_+	cd17472, MFS_YajR_like, Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily	NA|254aa|up_8|NZ_CP048599.1_1208013_1208775_+	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	NA|384aa|up_7|NZ_CP048599.1_1208779_1209931_-	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|460aa|up_6|NZ_CP048599.1_1209956_1211336_-	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA	NA|392aa|up_5|NZ_CP048599.1_1211504_1212680_-	PRK03545, PRK03545, putative arabinose transporter; Provisional	NA|248aa|up_4|NZ_CP048599.1_1212952_1213696_+	COG3338, Cah, Carbonic anhydrase [Inorganic ion transport and metabolism]	NA|402aa|up_3|NZ_CP048599.1_1213927_1215133_-	pfam05917, DUF874, Helicobacter pylori protein of unknown function (DUF874)	NA|347aa|up_2|NZ_CP048599.1_1215565_1216606_-	TIGR01296, Aspartate-semialdehyde_dehydrogenase, aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)	NA|443aa|up_1|NZ_CP048599.1_1216592_1217921_-	COG0124, HisS, Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	NA|350aa|up_0|NZ_CP048599.1_1217982_1219032_+	COG0859, RfaF, ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]	NA|68aa|down_0|NZ_CP048599.1_1219541_1219745_-	NA	NA|291aa|down_1|NZ_CP048599.1_1219744_1220617_-	COG0158, Fbp, Fructose-1,6-bisphosphatase [Carbohydrate transport and metabolism]	NA|218aa|down_2|NZ_CP048599.1_1220687_1221341_+	TIGR01163, Ribulose-phosphate_3-epimerase, ribulose-phosphate 3-epimerase	DEDDh|288aa|down_3|NZ_CP048599.1_1221318_1222182_+	PRK08517, PRK08517, 3'-5' exonuclease	NA|326aa|down_4|NZ_CP048599.1_1222220_1223198_-	sd00010, SLR, Sel1-like repeat	NA|99aa|down_5|NZ_CP048599.1_1223335_1223632_-	NA	NA|436aa|down_6|NZ_CP048599.1_1223650_1224958_-	COG1293, COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription]	NA|525aa|down_7|NZ_CP048599.1_1224954_1226529_-	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|285aa|down_8|NZ_CP048599.1_1226545_1227400_-	COG0061, nadF, NAD kinase [Coenzyme metabolism]	NA|243aa|down_9|NZ_CP048599.1_1227583_1228312_+	pfam01856, HP_OMP, Helicobacter outer membrane protein
