assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010748935.1_ASM1074893v1	NZ_CP048796	Providencia vermicola strain P8538 chromosome, complete genome	1	2741496-2741763	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	cas3,WYL,DEDDh,csa3,RT,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Type I-F	TTTCTAAGCTGCCTATACGGCAGTGAAC,TTTCTAAGCTGCCTATACGGCAGTGAAC,TTTCTAAGCTGCCTATACGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	4,4,3	4	TypeI-F	cas3,WYL,DEDDh,csa3,RT,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA|144aa|up_3|NZ_CP048796.1_2737825_2738257_+,NA|158aa|up_1|NZ_CP048796.1_2739202_2739676_-,NA|57aa|down_7|NZ_CP048796.1_2753269_2753440_-,NA|123aa|down_8|NZ_CP048796.1_2754384_2754753_-	NA|172aa|up_9|NZ_CP048796.1_2730897_2731413_+	cd02225, cupin_PA3510-like, Pseudomonas aeruginosa PA3510 and related proteins, cupin domain	NA|277aa|up_8|NZ_CP048796.1_2731428_2732259_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|265aa|up_7|NZ_CP048796.1_2732281_2733076_+	PRK07062, PRK07062, SDR family oxidoreductase	NA|265aa|up_6|NZ_CP048796.1_2733086_2733881_+	PRK13303, PRK13303, aspartate dehydrogenase	NA|490aa|up_5|NZ_CP048796.1_2733894_2735364_+	cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like	NA|548aa|up_4|NZ_CP048796.1_2735432_2737076_+	PRK07064, PRK07064, thiamine pyrophosphate-binding protein	NA|144aa|up_3|NZ_CP048796.1_2737825_2738257_+	NA	NA|122aa|up_2|NZ_CP048796.1_2738582_2738948_+	COG3544, COG3544, Uncharacterized protein conserved in bacteria [Function unknown]	NA|158aa|up_1|NZ_CP048796.1_2739202_2739676_-	NA	NA|261aa|up_0|NZ_CP048796.1_2739994_2740777_-	PRK00049, PRK00049, elongation factor Tu; Reviewed	cas6f|214aa|down_0|NZ_CP048796.1_2741893_2742535_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|342aa|down_1|NZ_CP048796.1_2742543_2743569_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|316aa|down_2|NZ_CP048796.1_2743571_2744519_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|424aa|down_3|NZ_CP048796.1_2744515_2745787_-	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas3f|1176aa|down_4|NZ_CP048796.1_2745998_2749526_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|326aa|down_5|NZ_CP048796.1_2749522_2750500_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|332aa|down_6|NZ_CP048796.1_2751992_2752988_+	COG3469, COG3469, Chitinase [Carbohydrate transport and metabolism]	NA|57aa|down_7|NZ_CP048796.1_2753269_2753440_-	NA	NA|123aa|down_8|NZ_CP048796.1_2754384_2754753_-	NA	NA|238aa|down_9|NZ_CP048796.1_2755984_2756698_-	cd03124, alpha_CA_prokaryotic_like, Carbonic anhydrase alpha, prokaryotic-like subfamily
GCF_010748935.1_ASM1074893v1	NZ_CP048796	Providencia vermicola strain P8538 chromosome, complete genome	2	2750776-2750926	2,2	PILER-CR,CRISPRCasFinder	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	cas3,WYL,DEDDh,csa3,RT,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Type I-F	GTTATTTCTAAGCTGCCTATACGGCAGTGCACCA,TTTCTAAGCTGCCTATACGGCAGTGCAC	34,28	0	0	NA	NA	I-F:I-F	2,2	2	TypeI-F	cas3,WYL,DEDDh,csa3,RT,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA|144aa|up_9|NZ_CP048796.1_2737825_2738257_+,NA|158aa|up_7|NZ_CP048796.1_2739202_2739676_-,NA|57aa|down_1|NZ_CP048796.1_2753269_2753440_-,NA|123aa|down_2|NZ_CP048796.1_2754384_2754753_-,NA|114aa|down_4|NZ_CP048796.1_2757152_2757494_-,NA|105aa|down_5|NZ_CP048796.1_2758915_2759230_+,NA|58aa|down_7|NZ_CP048796.1_2759745_2759919_-	NA|144aa|up_9|NZ_CP048796.1_2737825_2738257_+	NA	NA|122aa|up_8|NZ_CP048796.1_2738582_2738948_+	COG3544, COG3544, Uncharacterized protein conserved in bacteria [Function unknown]	NA|158aa|up_7|NZ_CP048796.1_2739202_2739676_-	NA	NA|261aa|up_6|NZ_CP048796.1_2739994_2740777_-	PRK00049, PRK00049, elongation factor Tu; Reviewed	cas6f|214aa|up_5|NZ_CP048796.1_2741893_2742535_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|342aa|up_4|NZ_CP048796.1_2742543_2743569_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|316aa|up_3|NZ_CP048796.1_2743571_2744519_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|424aa|up_2|NZ_CP048796.1_2744515_2745787_-	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas3f|1176aa|up_1|NZ_CP048796.1_2745998_2749526_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|326aa|up_0|NZ_CP048796.1_2749522_2750500_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|332aa|down_0|NZ_CP048796.1_2751992_2752988_+	COG3469, COG3469, Chitinase [Carbohydrate transport and metabolism]	NA|57aa|down_1|NZ_CP048796.1_2753269_2753440_-	NA	NA|123aa|down_2|NZ_CP048796.1_2754384_2754753_-	NA	NA|238aa|down_3|NZ_CP048796.1_2755984_2756698_-	cd03124, alpha_CA_prokaryotic_like, Carbonic anhydrase alpha, prokaryotic-like subfamily	NA|114aa|down_4|NZ_CP048796.1_2757152_2757494_-	NA	NA|105aa|down_5|NZ_CP048796.1_2758915_2759230_+	NA	NA|154aa|down_6|NZ_CP048796.1_2759275_2759737_-	pfam03245, Phage_lysis, Bacteriophage Rz lysis protein	NA|58aa|down_7|NZ_CP048796.1_2759745_2759919_-	NA	NA|157aa|down_8|NZ_CP048796.1_2759900_2760371_-	cd16900, endolysin_R21-like, endolysin R21-like proteins	NA|90aa|down_9|NZ_CP048796.1_2760370_2760640_-	pfam16080, Phage_holin_2_3, Bacteriophage holin family HP1
GCF_010748935.1_ASM1074893v1	NZ_CP048796	Providencia vermicola strain P8538 chromosome, complete genome	3	2877805-2877881	3	CRISPRCasFinder	no		cas3,WYL,DEDDh,csa3,RT,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	TTTCTAAGCTGCCTATACGGCAGTGAAC	28	0	0	NA	NA	I-F	1	1	Orphan	cas3,WYL,DEDDh,csa3,RT,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA	NA|456aa|up_9|NZ_CP048796.1_2869909_2871277_+	PRK07960, fliI, flagellum-specific ATP synthase FliI	NA|148aa|up_8|NZ_CP048796.1_2871284_2871728_+	PRK05689, fliJ, flagella biosynthesis chaperone FliJ	NA|453aa|up_7|NZ_CP048796.1_2871728_2873087_+	PRK10118, PRK10118, flagellar hook length control protein FliK	NA|161aa|up_6|NZ_CP048796.1_2873250_2873733_+	PRK07021, fliL, flagellar basal body-associated protein FliL; Reviewed	NA|336aa|up_5|NZ_CP048796.1_2873738_2874746_+	PRK06666, fliM, flagellar motor switch protein FliM; Validated	NA|139aa|up_4|NZ_CP048796.1_2874738_2875155_+	PRK07963, fliN, flagellar motor switch protein FliN; Validated	NA|143aa|up_3|NZ_CP048796.1_2875174_2875603_+	PRK11486, PRK11486, flagellar type III secretion system protein FliO	NA|248aa|up_2|NZ_CP048796.1_2875615_2876359_+	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed	NA|90aa|up_1|NZ_CP048796.1_2876405_2876675_+	PRK05700, fliQ, flagellar type III secretion system protein FliQ	NA|261aa|up_0|NZ_CP048796.1_2876677_2877460_+	PRK05701, fliR, flagellar type III secretion system protein FliR	NA|312aa|down_0|NZ_CP048796.1_2879411_2880347_-	PRK08027, flgL, flagellar hook-filament junction protein FlgL	NA|547aa|down_1|NZ_CP048796.1_2880375_2882016_-	PRK08147, flgK, flagellar hook-associated protein FlgK; Validated	NA|327aa|down_2|NZ_CP048796.1_2882156_2883137_-	PRK05684, flgJ, flagellar assembly peptidoglycan hydrolase FlgJ	NA|368aa|down_3|NZ_CP048796.1_2883136_2884240_-	PRK05303, flgI, flagellar basal body P-ring protein FlgI	NA|244aa|down_4|NZ_CP048796.1_2884277_2885009_-	PRK00249, flgH, flagellar basal body L-ring protein FlgH	NA|261aa|down_5|NZ_CP048796.1_2885135_2885918_-	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional	NA|252aa|down_6|NZ_CP048796.1_2885937_2886693_-	PRK12640, flgF, flagellar basal body rod protein FlgF; Reviewed	NA|407aa|down_7|NZ_CP048796.1_2886708_2887929_-	PRK05682, flgE, flagellar hook protein FlgE; Validated	NA|278aa|down_8|NZ_CP048796.1_2887959_2888793_-	PRK06655, flgD, flagellar hook assembly protein FlgD	NA|135aa|down_9|NZ_CP048796.1_2888805_2889210_-	PRK05681, flgC, flagellar basal body rod protein FlgC; Reviewed
GCF_010748935.1_ASM1074893v1	NZ_CP048796	Providencia vermicola strain P8538 chromosome, complete genome	4	2878170-2879157	3,4,2	PILER-CR,CRISPRCasFinder,CRT	no		cas3,WYL,DEDDh,csa3,RT,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	TTTCTAAGCTGCCTATACGGCAGTGAAC,TTTCTAAGCTGCCTATACGGCAGTGAAC,TTTCTAAGCTGCCTATACGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	16,16,16	16	Orphan	cas3,WYL,DEDDh,csa3,RT,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA	NA|456aa|up_9|NZ_CP048796.1_2869909_2871277_+	PRK07960, fliI, flagellum-specific ATP synthase FliI	NA|148aa|up_8|NZ_CP048796.1_2871284_2871728_+	PRK05689, fliJ, flagella biosynthesis chaperone FliJ	NA|453aa|up_7|NZ_CP048796.1_2871728_2873087_+	PRK10118, PRK10118, flagellar hook length control protein FliK	NA|161aa|up_6|NZ_CP048796.1_2873250_2873733_+	PRK07021, fliL, flagellar basal body-associated protein FliL; Reviewed	NA|336aa|up_5|NZ_CP048796.1_2873738_2874746_+	PRK06666, fliM, flagellar motor switch protein FliM; Validated	NA|139aa|up_4|NZ_CP048796.1_2874738_2875155_+	PRK07963, fliN, flagellar motor switch protein FliN; Validated	NA|143aa|up_3|NZ_CP048796.1_2875174_2875603_+	PRK11486, PRK11486, flagellar type III secretion system protein FliO	NA|248aa|up_2|NZ_CP048796.1_2875615_2876359_+	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed	NA|90aa|up_1|NZ_CP048796.1_2876405_2876675_+	PRK05700, fliQ, flagellar type III secretion system protein FliQ	NA|261aa|up_0|NZ_CP048796.1_2876677_2877460_+	PRK05701, fliR, flagellar type III secretion system protein FliR	NA|312aa|down_0|NZ_CP048796.1_2879411_2880347_-	PRK08027, flgL, flagellar hook-filament junction protein FlgL	NA|547aa|down_1|NZ_CP048796.1_2880375_2882016_-	PRK08147, flgK, flagellar hook-associated protein FlgK; Validated	NA|327aa|down_2|NZ_CP048796.1_2882156_2883137_-	PRK05684, flgJ, flagellar assembly peptidoglycan hydrolase FlgJ	NA|368aa|down_3|NZ_CP048796.1_2883136_2884240_-	PRK05303, flgI, flagellar basal body P-ring protein FlgI	NA|244aa|down_4|NZ_CP048796.1_2884277_2885009_-	PRK00249, flgH, flagellar basal body L-ring protein FlgH	NA|261aa|down_5|NZ_CP048796.1_2885135_2885918_-	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional	NA|252aa|down_6|NZ_CP048796.1_2885937_2886693_-	PRK12640, flgF, flagellar basal body rod protein FlgF; Reviewed	NA|407aa|down_7|NZ_CP048796.1_2886708_2887929_-	PRK05682, flgE, flagellar hook protein FlgE; Validated	NA|278aa|down_8|NZ_CP048796.1_2887959_2888793_-	PRK06655, flgD, flagellar hook assembly protein FlgD	NA|135aa|down_9|NZ_CP048796.1_2888805_2889210_-	PRK05681, flgC, flagellar basal body rod protein FlgC; Reviewed
GCF_010748935.1_ASM1074893v1	NZ_CP048796	Providencia vermicola strain P8538 chromosome, complete genome	5	4058747-4058864	5	CRISPRCasFinder	no		cas3,WYL,DEDDh,csa3,RT,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	AAAGGAGGTTATCCCAAGGAACATACATT	29	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,DEDDh,csa3,RT,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA	NA|356aa|up_9|NZ_CP048796.1_4044830_4045898_-	PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional	NA|421aa|up_8|NZ_CP048796.1_4045894_4047157_-	PRK11064, wecC, UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional	NA|377aa|up_7|NZ_CP048796.1_4047153_4048284_-	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|353aa|up_6|NZ_CP048796.1_4048382_4049441_-	PRK11638, PRK11638, ECA polysaccharide chain length modulation protein	NA|363aa|up_5|NZ_CP048796.1_4049472_4050561_-	PRK15119, PRK15119, UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase	NA|420aa|up_4|NZ_CP048796.1_4051291_4052551_-	PRK09376, rho, transcription termination factor Rho; Provisional	NA|109aa|up_3|NZ_CP048796.1_4053231_4053558_-	PRK09381, trxA, thioredoxin TrxA	NA|429aa|up_2|NZ_CP048796.1_4053675_4054962_+	PRK04837, PRK04837, ATP-dependent RNA helicase RhlB; Provisional	NA|502aa|up_1|NZ_CP048796.1_4054973_4056479_+	PRK11031, PRK11031, guanosine-5'-triphosphate,3'-diphosphate diphosphatase	NA|675aa|up_0|NZ_CP048796.1_4056528_4058553_-	PRK10919, PRK10919, ATP-dependent DNA helicase Rep; Provisional	NA|492aa|down_0|NZ_CP048796.1_4058928_4060404_-	PRK05225, PRK05225, ketol-acid reductoisomerase; Validated	NA|299aa|down_1|NZ_CP048796.1_4060581_4061478_+	PRK11716, PRK11716, HTH-type transcriptional activator IlvY	NA|525aa|down_2|NZ_CP048796.1_4061469_4063044_-	PRK09224, PRK09224, threonine ammonia-lyase IlvA	NA|617aa|down_3|NZ_CP048796.1_4063046_4064897_-	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional	NA|309aa|down_4|NZ_CP048796.1_4064962_4065889_-	PRK06606, PRK06606, branched-chain amino acid transaminase	NA|90aa|down_5|NZ_CP048796.1_4065901_4066171_-	PRK11152, ilvM, acetolactate synthase 2 small subunit	NA|549aa|down_6|NZ_CP048796.1_4066167_4067814_-	PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed	NA|34aa|down_7|NZ_CP048796.1_4067948_4068050_-	PRK10424, PRK10424, ilv operon leader peptide	NA|509aa|down_8|NZ_CP048796.1_4068529_4070056_+	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|113aa|down_9|NZ_CP048796.1_4070258_4070597_-	PRK11027, PRK11027, hypothetical protein; Provisional
