assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010731775.1_ASM1073177v1	NZ_AP022590	Mycobacterium mantenii strain JCM 18113	1	30848-30928	1	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	GGCGAAGGGGGTCGCCACGATCCG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|110aa|up_5|NZ_AP022590.1_25915_26245_-,NA|181aa|up_4|NZ_AP022590.1_26241_26784_-,NA|46aa|up_3|NZ_AP022590.1_27250_27388_+,NA|87aa|up_2|NZ_AP022590.1_27437_27698_-,NA|130aa|down_6|NZ_AP022590.1_39744_40134_-	NA|246aa|up_9|NZ_AP022590.1_22144_22882_-	PRK14948, PRK14948, DNA polymerase III subunit gamma/tau	NA|124aa|up_8|NZ_AP022590.1_23072_23444_-	pfam13827, DUF4189, Domain of unknown function (DUF4189)	NA|240aa|up_7|NZ_AP022590.1_23764_24484_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|73aa|up_6|NZ_AP022590.1_24476_24695_-	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional	NA|110aa|up_5|NZ_AP022590.1_25915_26245_-	NA	NA|181aa|up_4|NZ_AP022590.1_26241_26784_-	NA	NA|46aa|up_3|NZ_AP022590.1_27250_27388_+	NA	NA|87aa|up_2|NZ_AP022590.1_27437_27698_-	NA	NA|347aa|up_1|NZ_AP022590.1_28536_29577_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|366aa|up_0|NZ_AP022590.1_29696_30794_-	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|562aa|down_0|NZ_AP022590.1_31141_32827_+	cd01662, Ubiquinol_Oxidase_I, Ubiquinol oxidase subunit I	NA|277aa|down_1|NZ_AP022590.1_35210_36041_+	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|255aa|down_2|NZ_AP022590.1_36037_36802_+	PRK05869, PRK05869, enoyl-CoA hydratase; Validated	NA|324aa|down_3|NZ_AP022590.1_36812_37784_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|360aa|down_4|NZ_AP022590.1_37891_38971_+	pfam18096, Thump_like, THUMP domain-like	NA|227aa|down_5|NZ_AP022590.1_39041_39722_+	pfam11738, DUF3298, Protein of unknown function (DUF3298)	NA|130aa|down_6|NZ_AP022590.1_39744_40134_-	NA	NA|365aa|down_7|NZ_AP022590.1_40152_41247_-	COG1520, COG1520, FOG: WD40-like repeat [Function unknown]	NA|246aa|down_8|NZ_AP022590.1_41599_42337_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|143aa|down_9|NZ_AP022590.1_42333_42762_-	pfam14230, DUF4333, Domain of unknown function (DUF4333)
GCF_010731775.1_ASM1073177v1	NZ_AP022590	Mycobacterium mantenii strain JCM 18113	2	187889-188000	2	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	GTTGACCGATAGCGGCACTGTGACGGT	27	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|148aa|up_0|NZ_AP022590.1_178427_178871_-,NA|77aa|down_2|NZ_AP022590.1_196155_196386_-,NA|242aa|down_3|NZ_AP022590.1_196366_197092_+	NA|240aa|up_9|NZ_AP022590.1_170662_171382_+	PRK00015, rnhB, ribonuclease HII; Validated	NA|102aa|up_8|NZ_AP022590.1_171473_171779_+	pfam10611, DUF2469, Protein of unknown function (DUF2469)	NA|257aa|up_7|NZ_AP022590.1_171785_172556_-	smart01012, ANTAR, ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins	NA|327aa|up_6|NZ_AP022590.1_172861_173842_+	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs	NA|273aa|up_5|NZ_AP022590.1_173938_174757_+	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD	NA|126aa|up_4|NZ_AP022590.1_174875_175253_+	PRK12497, PRK12497, YraN family protein	NA|504aa|up_3|NZ_AP022590.1_175252_176764_+	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|92aa|up_2|NZ_AP022590.1_176790_177066_-	pfam13828, DUF4190, Domain of unknown function (DUF4190)	NA|389aa|up_1|NZ_AP022590.1_177176_178343_+	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]	NA|148aa|up_0|NZ_AP022590.1_178427_178871_-	NA	NA|1254aa|down_0|NZ_AP022590.1_190206_193968_+	PRK15319, PRK15319, fibronectin-binding autotransporter adhesin ShdA	NA|699aa|down_1|NZ_AP022590.1_194021_196118_+	PRK15319, PRK15319, fibronectin-binding autotransporter adhesin ShdA	NA|77aa|down_2|NZ_AP022590.1_196155_196386_-	NA	NA|242aa|down_3|NZ_AP022590.1_196366_197092_+	NA	NA|286aa|down_4|NZ_AP022590.1_197259_198117_+	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|387aa|down_5|NZ_AP022590.1_198141_199302_+	cd03332, LMO_FMN, L-Lactate 2-monooxygenase (LMO) FMN-binding domain	NA|302aa|down_6|NZ_AP022590.1_199334_200240_+	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|164aa|down_7|NZ_AP022590.1_200246_200738_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|278aa|down_8|NZ_AP022590.1_201040_201874_+	PRK05299, rpsB, 30S ribosomal protein S2; Provisional	NA|272aa|down_9|NZ_AP022590.1_201886_202702_+	PRK09377, tsf, elongation factor Ts; Provisional
GCF_010731775.1_ASM1073177v1	NZ_AP022590	Mycobacterium mantenii strain JCM 18113	3	188225-188647	3	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	GTTGACCGATAGCGGCACTGTGACGGT	27	5	8	188252-188284|188252-188284|188312-188368|188396-188452|188480-188536|188480-188536|188564-188620|188564-188620	NZ_AP022590.1_192234-192266|NZ_AP022590.1_195434-195466|NZ_AP022590.1_192294-192350|NZ_AP022590.1_192378-192434|NZ_AP022590.1_192462-192518|NZ_AP022590.1_184259-184315|NZ_AP022590.1_192546-192602|NZ_AP022590.1_184343-184399	NA	5	5	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|148aa|up_0|NZ_AP022590.1_178427_178871_-,NA|77aa|down_2|NZ_AP022590.1_196155_196386_-,NA|242aa|down_3|NZ_AP022590.1_196366_197092_+	NA|240aa|up_9|NZ_AP022590.1_170662_171382_+	PRK00015, rnhB, ribonuclease HII; Validated	NA|102aa|up_8|NZ_AP022590.1_171473_171779_+	pfam10611, DUF2469, Protein of unknown function (DUF2469)	NA|257aa|up_7|NZ_AP022590.1_171785_172556_-	smart01012, ANTAR, ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins	NA|327aa|up_6|NZ_AP022590.1_172861_173842_+	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs	NA|273aa|up_5|NZ_AP022590.1_173938_174757_+	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD	NA|126aa|up_4|NZ_AP022590.1_174875_175253_+	PRK12497, PRK12497, YraN family protein	NA|504aa|up_3|NZ_AP022590.1_175252_176764_+	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|92aa|up_2|NZ_AP022590.1_176790_177066_-	pfam13828, DUF4190, Domain of unknown function (DUF4190)	NA|389aa|up_1|NZ_AP022590.1_177176_178343_+	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]	NA|148aa|up_0|NZ_AP022590.1_178427_178871_-	NA	NA|1254aa|down_0|NZ_AP022590.1_190206_193968_+	PRK15319, PRK15319, fibronectin-binding autotransporter adhesin ShdA	NA|699aa|down_1|NZ_AP022590.1_194021_196118_+	PRK15319, PRK15319, fibronectin-binding autotransporter adhesin ShdA	NA|77aa|down_2|NZ_AP022590.1_196155_196386_-	NA	NA|242aa|down_3|NZ_AP022590.1_196366_197092_+	NA	NA|286aa|down_4|NZ_AP022590.1_197259_198117_+	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|387aa|down_5|NZ_AP022590.1_198141_199302_+	cd03332, LMO_FMN, L-Lactate 2-monooxygenase (LMO) FMN-binding domain	NA|302aa|down_6|NZ_AP022590.1_199334_200240_+	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|164aa|down_7|NZ_AP022590.1_200246_200738_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|278aa|down_8|NZ_AP022590.1_201040_201874_+	PRK05299, rpsB, 30S ribosomal protein S2; Provisional	NA|272aa|down_9|NZ_AP022590.1_201886_202702_+	PRK09377, tsf, elongation factor Ts; Provisional
GCF_010731775.1_ASM1073177v1	NZ_AP022590	Mycobacterium mantenii strain JCM 18113	4	194087-194198	4	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	GTTGACCGATAGCGGCACTGTGACGGT	27	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|148aa|up_2|NZ_AP022590.1_178427_178871_-,NA|77aa|down_0|NZ_AP022590.1_196155_196386_-,NA|242aa|down_1|NZ_AP022590.1_196366_197092_+	NA|257aa|up_9|NZ_AP022590.1_171785_172556_-	smart01012, ANTAR, ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins	NA|327aa|up_8|NZ_AP022590.1_172861_173842_+	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs	NA|273aa|up_7|NZ_AP022590.1_173938_174757_+	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD	NA|126aa|up_6|NZ_AP022590.1_174875_175253_+	PRK12497, PRK12497, YraN family protein	NA|504aa|up_5|NZ_AP022590.1_175252_176764_+	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|92aa|up_4|NZ_AP022590.1_176790_177066_-	pfam13828, DUF4190, Domain of unknown function (DUF4190)	NA|389aa|up_3|NZ_AP022590.1_177176_178343_+	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]	NA|148aa|up_2|NZ_AP022590.1_178427_178871_-	NA	NA|3599aa|up_1|NZ_AP022590.1_179459_190256_+	pfam00823, PPE, PPE family	NA|1254aa|up_0|NZ_AP022590.1_190206_193968_+	PRK15319, PRK15319, fibronectin-binding autotransporter adhesin ShdA	NA|77aa|down_0|NZ_AP022590.1_196155_196386_-	NA	NA|242aa|down_1|NZ_AP022590.1_196366_197092_+	NA	NA|286aa|down_2|NZ_AP022590.1_197259_198117_+	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|387aa|down_3|NZ_AP022590.1_198141_199302_+	cd03332, LMO_FMN, L-Lactate 2-monooxygenase (LMO) FMN-binding domain	NA|302aa|down_4|NZ_AP022590.1_199334_200240_+	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|164aa|down_5|NZ_AP022590.1_200246_200738_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|278aa|down_6|NZ_AP022590.1_201040_201874_+	PRK05299, rpsB, 30S ribosomal protein S2; Provisional	NA|272aa|down_7|NZ_AP022590.1_201886_202702_+	PRK09377, tsf, elongation factor Ts; Provisional	NA|473aa|down_8|NZ_AP022590.1_202786_204205_+	PRK07869, PRK07869, amidase; Provisional	NA|140aa|down_9|NZ_AP022590.1_204260_204680_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein
GCF_010731775.1_ASM1073177v1	NZ_AP022590	Mycobacterium mantenii strain JCM 18113	5	194423-194845	5	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	GTTGACCGATAGCGGCACTGTGACGGT	27	5	8	194450-194482|194450-194482|194510-194566|194594-194650|194678-194734|194678-194734|194762-194818|194762-194818	NZ_AP022590.1_192234-192266|NZ_AP022590.1_195434-195466|NZ_AP022590.1_192294-192350|NZ_AP022590.1_192378-192434|NZ_AP022590.1_192462-192518|NZ_AP022590.1_184259-184315|NZ_AP022590.1_192546-192602|NZ_AP022590.1_184343-184399	NA	5	5	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|148aa|up_2|NZ_AP022590.1_178427_178871_-,NA|77aa|down_0|NZ_AP022590.1_196155_196386_-,NA|242aa|down_1|NZ_AP022590.1_196366_197092_+	NA|257aa|up_9|NZ_AP022590.1_171785_172556_-	smart01012, ANTAR, ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins	NA|327aa|up_8|NZ_AP022590.1_172861_173842_+	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs	NA|273aa|up_7|NZ_AP022590.1_173938_174757_+	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD	NA|126aa|up_6|NZ_AP022590.1_174875_175253_+	PRK12497, PRK12497, YraN family protein	NA|504aa|up_5|NZ_AP022590.1_175252_176764_+	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|92aa|up_4|NZ_AP022590.1_176790_177066_-	pfam13828, DUF4190, Domain of unknown function (DUF4190)	NA|389aa|up_3|NZ_AP022590.1_177176_178343_+	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]	NA|148aa|up_2|NZ_AP022590.1_178427_178871_-	NA	NA|3599aa|up_1|NZ_AP022590.1_179459_190256_+	pfam00823, PPE, PPE family	NA|1254aa|up_0|NZ_AP022590.1_190206_193968_+	PRK15319, PRK15319, fibronectin-binding autotransporter adhesin ShdA	NA|77aa|down_0|NZ_AP022590.1_196155_196386_-	NA	NA|242aa|down_1|NZ_AP022590.1_196366_197092_+	NA	NA|286aa|down_2|NZ_AP022590.1_197259_198117_+	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|387aa|down_3|NZ_AP022590.1_198141_199302_+	cd03332, LMO_FMN, L-Lactate 2-monooxygenase (LMO) FMN-binding domain	NA|302aa|down_4|NZ_AP022590.1_199334_200240_+	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|164aa|down_5|NZ_AP022590.1_200246_200738_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|278aa|down_6|NZ_AP022590.1_201040_201874_+	PRK05299, rpsB, 30S ribosomal protein S2; Provisional	NA|272aa|down_7|NZ_AP022590.1_201886_202702_+	PRK09377, tsf, elongation factor Ts; Provisional	NA|473aa|down_8|NZ_AP022590.1_202786_204205_+	PRK07869, PRK07869, amidase; Provisional	NA|140aa|down_9|NZ_AP022590.1_204260_204680_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein
GCF_010731775.1_ASM1073177v1	NZ_AP022590	Mycobacterium mantenii strain JCM 18113	6	1477438-1477543	6	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	CCGTCAATACGTCACTGTGACAAAT	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|86aa|up_5|NZ_AP022590.1_1472973_1473231_+,NA|112aa|up_4|NZ_AP022590.1_1473218_1473554_-,NA|48aa|up_2|NZ_AP022590.1_1474709_1474853_-,NA|83aa|up_0|NZ_AP022590.1_1476231_1476480_+,NA|81aa|down_0|NZ_AP022590.1_1477586_1477829_-,NA|77aa|down_1|NZ_AP022590.1_1477815_1478046_-	NA|107aa|up_9|NZ_AP022590.1_1466790_1467111_+	TIGR00864, PCC, polycystin cation channel protein	NA|1121aa|up_8|NZ_AP022590.1_1467177_1470540_-	COG4913, COG4913, Uncharacterized protein conserved in bacteria [Function unknown]	NA|241aa|up_7|NZ_AP022590.1_1470532_1471255_-	pfam13835, DUF4194, Domain of unknown function (DUF4194)	NA|501aa|up_6|NZ_AP022590.1_1471251_1472754_-	pfam11855, DUF3375, Protein of unknown function (DUF3375)	NA|86aa|up_5|NZ_AP022590.1_1472973_1473231_+	NA	NA|112aa|up_4|NZ_AP022590.1_1473218_1473554_-	NA	NA|152aa|up_3|NZ_AP022590.1_1474122_1474578_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|48aa|up_2|NZ_AP022590.1_1474709_1474853_-	NA	NA|203aa|up_1|NZ_AP022590.1_1475228_1475837_+	pfam08310, LGFP, LGFP repeat	NA|83aa|up_0|NZ_AP022590.1_1476231_1476480_+	NA	NA|81aa|down_0|NZ_AP022590.1_1477586_1477829_-	NA	NA|77aa|down_1|NZ_AP022590.1_1477815_1478046_-	NA	NA|336aa|down_2|NZ_AP022590.1_1479204_1480212_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|210aa|down_3|NZ_AP022590.1_1480353_1480983_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|224aa|down_4|NZ_AP022590.1_1481024_1481696_+	PLN02267, PLN02267, enoyl-CoA hydratase/isomerase family protein	NA|309aa|down_5|NZ_AP022590.1_1481769_1482696_+	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|203aa|down_6|NZ_AP022590.1_1482904_1483513_+	TIGR03968, transcriptional_regulator_TetR_family, mycofactocin system transcriptional regulator	NA|139aa|down_7|NZ_AP022590.1_1483826_1484243_+	pfam05423, Mycobact_memb, Mycobacterium membrane protein	NA|967aa|down_8|NZ_AP022590.1_1484239_1487140_+	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|261aa|down_9|NZ_AP022590.1_1487221_1488004_-	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs
GCF_010731775.1_ASM1073177v1	NZ_AP022590	Mycobacterium mantenii strain JCM 18113	7	1602603-1602694	7	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	GAGCGCGGCCGCGAACTCGCCAGCAC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA,NA|221aa|down_5|NZ_AP022590.1_1608287_1608950_+,NA|212aa|down_9|NZ_AP022590.1_1611879_1612515_-	NA|96aa|up_9|NZ_AP022590.1_1593531_1593819_+	pfam11829, DUF3349, Protein of unknown function (DUF3349)	NA|322aa|up_8|NZ_AP022590.1_1593843_1594809_-	cd07207, Pat_ExoU_VipD_like, ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2	NA|357aa|up_7|NZ_AP022590.1_1594892_1595963_-	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|281aa|up_6|NZ_AP022590.1_1595965_1596808_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|315aa|up_5|NZ_AP022590.1_1596794_1597739_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|442aa|up_4|NZ_AP022590.1_1597759_1599085_-	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|309aa|up_3|NZ_AP022590.1_1599142_1600069_-	PRK09636, PRK09636, RNA polymerase sigma factor SigJ; Provisional	NA|117aa|up_2|NZ_AP022590.1_1600234_1600585_+	pfam13564, DoxX_2, DoxX-like family	NA|266aa|up_1|NZ_AP022590.1_1600606_1601404_-	pfam02136, NTF2, Nuclear transport factor 2 (NTF2) domain	NA|187aa|up_0|NZ_AP022590.1_1601406_1601967_-	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase)	NA|193aa|down_0|NZ_AP022590.1_1603077_1603656_-	COG4185, COG4185, Uncharacterized protein conserved in bacteria [Function unknown]	NA|130aa|down_1|NZ_AP022590.1_1603686_1604076_-	pfam11903, ParD_like, ParD-like antitoxin of type II bacterial toxin-antitoxin system	NA|165aa|down_2|NZ_AP022590.1_1604144_1604639_-	COG3265, GntK, Gluconate kinase [Carbohydrate transport and metabolism]	NA|674aa|down_3|NZ_AP022590.1_1604635_1606657_-	pfam02958, EcKinase, Ecdysteroid kinase	NA|506aa|down_4|NZ_AP022590.1_1606675_1608193_-	COG2272, PnbA, Carboxylesterase type B [Lipid metabolism]	NA|221aa|down_5|NZ_AP022590.1_1608287_1608950_+	NA	NA|324aa|down_6|NZ_AP022590.1_1608939_1609911_-	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs	NA|408aa|down_7|NZ_AP022590.1_1609921_1611145_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|210aa|down_8|NZ_AP022590.1_1611237_1611867_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|212aa|down_9|NZ_AP022590.1_1611879_1612515_-	NA
GCF_010731775.1_ASM1073177v1	NZ_AP022590	Mycobacterium mantenii strain JCM 18113	8	1796564-1796667	8	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	AAACCGCAGGTCAAGCGATCACGC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA,NA|131aa|down_0|NZ_AP022590.1_1796808_1797201_+,NA|195aa|down_1|NZ_AP022590.1_1797197_1797782_+,NA|123aa|down_4|NZ_AP022590.1_1799346_1799715_+,NA|103aa|down_5|NZ_AP022590.1_1799718_1800027_+,NA|154aa|down_7|NZ_AP022590.1_1800924_1801386_+,NA|62aa|down_8|NZ_AP022590.1_1801389_1801575_-,NA|110aa|down_9|NZ_AP022590.1_1801920_1802250_-	NA|205aa|up_9|NZ_AP022590.1_1787926_1788541_+	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|161aa|up_8|NZ_AP022590.1_1788537_1789020_+	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|460aa|up_7|NZ_AP022590.1_1789311_1790691_-	pfam02720, DUF222, Domain of unknown function (DUF222)	NA|177aa|up_6|NZ_AP022590.1_1790984_1791515_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|452aa|up_5|NZ_AP022590.1_1791551_1792907_-	PRK07906, PRK07906, hypothetical protein; Provisional	NA|383aa|up_4|NZ_AP022590.1_1793149_1794298_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|164aa|up_3|NZ_AP022590.1_1794284_1794776_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|67aa|up_2|NZ_AP022590.1_1794910_1795111_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|98aa|up_1|NZ_AP022590.1_1795146_1795440_+	pfam10888, DUF2742, Protein of unknown function (DUF2742)	NA|324aa|up_0|NZ_AP022590.1_1795559_1796531_+	pfam13481, AAA_25, AAA domain	NA|131aa|down_0|NZ_AP022590.1_1796808_1797201_+	NA	NA|195aa|down_1|NZ_AP022590.1_1797197_1797782_+	NA	NA|284aa|down_2|NZ_AP022590.1_1797928_1798780_+	TIGR01554, prophage_Lp3_protein_18, phage major capsid protein, HK97 family	NA|95aa|down_3|NZ_AP022590.1_1798928_1799213_+	pfam01844, HNH, HNH endonuclease	NA|123aa|down_4|NZ_AP022590.1_1799346_1799715_+	NA	NA|103aa|down_5|NZ_AP022590.1_1799718_1800027_+	NA	NA|282aa|down_6|NZ_AP022590.1_1800074_1800920_+	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|154aa|down_7|NZ_AP022590.1_1800924_1801386_+	NA	NA|62aa|down_8|NZ_AP022590.1_1801389_1801575_-	NA	NA|110aa|down_9|NZ_AP022590.1_1801920_1802250_-	NA
GCF_010731775.1_ASM1073177v1	NZ_AP022590	Mycobacterium mantenii strain JCM 18113	9	2122122-2122576	1	CRT	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	GCNTCGGCGGCCAGCGCTTNGGCNNC	26	0	0	NA	NA	NA	8	8	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|309aa|up_4|NZ_AP022590.1_2117260_2118187_-,NA|326aa|up_3|NZ_AP022590.1_2118183_2119161_-,NA|158aa|up_2|NZ_AP022590.1_2119151_2119625_-,NA|67aa|down_9|NZ_AP022590.1_2135008_2135209_-	NA|102aa|up_9|NZ_AP022590.1_2113138_2113444_+	COG5178, PRP8, U5 snRNP spliceosome subunit [RNA processing and modification]	NA|309aa|up_8|NZ_AP022590.1_2113458_2114385_-	pfam04536, TPM_phosphatase, TPM domain	NA|382aa|up_7|NZ_AP022590.1_2114920_2116066_-	cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1	NA|129aa|up_6|NZ_AP022590.1_2116122_2116509_-	COG3012, COG3012, Uncharacterized protein conserved in bacteria [Function unknown]	NA|245aa|up_5|NZ_AP022590.1_2116529_2117264_-	COG5178, PRP8, U5 snRNP spliceosome subunit [RNA processing and modification]	NA|309aa|up_4|NZ_AP022590.1_2117260_2118187_-	NA	NA|326aa|up_3|NZ_AP022590.1_2118183_2119161_-	NA	NA|158aa|up_2|NZ_AP022590.1_2119151_2119625_-	NA	NA|289aa|up_1|NZ_AP022590.1_2119614_2120481_-	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|334aa|up_0|NZ_AP022590.1_2120498_2121500_-	pfam07726, AAA_3, ATPase family associated with various cellular activities (AAA)	NA|243aa|down_0|NZ_AP022590.1_2123377_2124106_+	pfam05711, TylF, Macrocin-O-methyltransferase (TylF)	NA|848aa|down_1|NZ_AP022590.1_2124169_2126713_-	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair]	NA|384aa|down_2|NZ_AP022590.1_2126866_2128018_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|395aa|down_3|NZ_AP022590.1_2128068_2129253_+	PRK06849, PRK06849, hypothetical protein; Provisional	NA|295aa|down_4|NZ_AP022590.1_2129241_2130126_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|341aa|down_5|NZ_AP022590.1_2130688_2131711_-	cd06338, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems predicted to be involved in transport of amino acids, peptides, or inorganic ions	NA|87aa|down_6|NZ_AP022590.1_2131917_2132178_+	pfam08940, DUF1918, Domain of unknown function (DUF1918)	NA|303aa|down_7|NZ_AP022590.1_2132273_2133182_-	cd08826, SPFH_eoslipins_u1, Uncharacterized prokaryotic subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|507aa|down_8|NZ_AP022590.1_2133483_2135004_+	cd02110, SO_family_Moco_dimer, Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved dimerization domain	NA|67aa|down_9|NZ_AP022590.1_2135008_2135209_-	NA
GCF_010731775.1_ASM1073177v1	NZ_AP022590	Mycobacterium mantenii strain JCM 18113	10	2214005-2214082	9	CRISPRCasFinder	no	csa3	csa3,cas3,WYL,cas4,DEDDh,DinG	Type I-A	AGGCCTGCATCGTCGCGGGGCTA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|93aa|up_3|NZ_AP022590.1_2209750_2210029_+,NA|74aa|down_1|NZ_AP022590.1_2216125_2216347_-,NA|143aa|down_6|NZ_AP022590.1_2220847_2221276_-	NA|430aa|up_9|NZ_AP022590.1_2202760_2204050_+	TIGR03934, fibronectin-binding_protein_I_partial, TQXA domain	NA|311aa|up_8|NZ_AP022590.1_2204050_2204983_+	TIGR01136, Cysteine_synthase, cysteine synthase	NA|228aa|up_7|NZ_AP022590.1_2204984_2205668_+	COG1045, CysE, Serine acetyltransferase [Amino acid transport and metabolism]	NA|374aa|up_6|NZ_AP022590.1_2205887_2207009_+	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family	NA|374aa|up_5|NZ_AP022590.1_2207005_2208127_+	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|462aa|up_4|NZ_AP022590.1_2208123_2209509_+	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family	NA|93aa|up_3|NZ_AP022590.1_2209750_2210029_+	NA	NA|652aa|up_2|NZ_AP022590.1_2210012_2211968_-	PRK05667, dnaG, DNA primase; Validated	NA|206aa|up_1|NZ_AP022590.1_2211997_2212615_-	COG2032, SodC, Cu/Zn superoxide dismutase [Inorganic ion transport and metabolism]	NA|422aa|up_0|NZ_AP022590.1_2212682_2213948_-	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional	NA|662aa|down_0|NZ_AP022590.1_2214092_2216078_+	pfam04536, TPM_phosphatase, TPM domain	NA|74aa|down_1|NZ_AP022590.1_2216125_2216347_-	NA	NA|405aa|down_2|NZ_AP022590.1_2216922_2218137_-	pfam00823, PPE, PPE family	NA|464aa|down_3|NZ_AP022590.1_2218393_2219785_-	PRK04173, PRK04173, glycyl-tRNA synthetase; Provisional	csa3|141aa|down_4|NZ_AP022590.1_2219975_2220398_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|132aa|down_5|NZ_AP022590.1_2220447_2220843_+	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|143aa|down_6|NZ_AP022590.1_2220847_2221276_-	NA	NA|306aa|down_7|NZ_AP022590.1_2221275_2222193_-	PRK14827, PRK14827, undecaprenyl pyrophosphate synthase; Provisional	NA|266aa|down_8|NZ_AP022590.1_2222185_2222983_-	PRK00085, recO, DNA repair protein RecO; Reviewed	NA|495aa|down_9|NZ_AP022590.1_2223044_2224529_+	PRK06061, PRK06061, amidase; Provisional
GCF_010731775.1_ASM1073177v1	NZ_AP022590	Mycobacterium mantenii strain JCM 18113	11	4322698-4322790	10	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	GCCGTCGCCGTCGGTATCGACGTA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|150aa|up_3|NZ_AP022590.1_4318397_4318847_-,NA|183aa|up_2|NZ_AP022590.1_4319106_4319655_-,NA|510aa|down_1|NZ_AP022590.1_4324738_4326268_+,NA|79aa|down_2|NZ_AP022590.1_4326390_4326627_+,NA|92aa|down_3|NZ_AP022590.1_4326662_4326938_+,NA|800aa|down_5|NZ_AP022590.1_4327755_4330155_+,NA|257aa|down_6|NZ_AP022590.1_4334538_4335309_+	NA|952aa|up_9|NZ_AP022590.1_4305527_4308383_+	TIGR00833, Putative_membrane_protein_ActII-3, Transport protein	NA|1408aa|up_8|NZ_AP022590.1_4308363_4312587_-	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|496aa|up_7|NZ_AP022590.1_4312590_4314078_-	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|289aa|up_6|NZ_AP022590.1_4314080_4314947_-	COG3953, COG3953, SLT domain proteins [General function prediction only]	NA|299aa|up_5|NZ_AP022590.1_4315218_4316115_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|715aa|up_4|NZ_AP022590.1_4316263_4318408_-	pfam18645, DUF5631, Family of unknown function (DUF5631)	NA|150aa|up_3|NZ_AP022590.1_4318397_4318847_-	NA	NA|183aa|up_2|NZ_AP022590.1_4319106_4319655_-	NA	NA|110aa|up_1|NZ_AP022590.1_4320242_4320572_-	pfam10817, DUF2563, Protein of unknown function (DUF2563)	NA|655aa|up_0|NZ_AP022590.1_4320636_4322601_-	pfam06259, Abhydrolase_8, Alpha/beta hydrolase	NA|481aa|down_0|NZ_AP022590.1_4323162_4324605_-	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase	NA|510aa|down_1|NZ_AP022590.1_4324738_4326268_+	NA	NA|79aa|down_2|NZ_AP022590.1_4326390_4326627_+	NA	NA|92aa|down_3|NZ_AP022590.1_4326662_4326938_+	NA	NA|245aa|down_4|NZ_AP022590.1_4327024_4327759_+	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily	NA|800aa|down_5|NZ_AP022590.1_4327755_4330155_+	NA	NA|257aa|down_6|NZ_AP022590.1_4334538_4335309_+	NA	NA|337aa|down_7|NZ_AP022590.1_4335395_4336406_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|118aa|down_8|NZ_AP022590.1_4336402_4336756_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|408aa|down_9|NZ_AP022590.1_4336888_4338112_+	COG0860, AmiC, N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]
GCF_010731775.1_ASM1073177v1	NZ_AP022590	Mycobacterium mantenii strain JCM 18113	12	5466106-5466247	11	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	CCGCCGGCTGCGGCTCCGCTGCCCG	25	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA,NA|174aa|down_1|NZ_AP022590.1_5468166_5468688_-,NA|214aa|down_2|NZ_AP022590.1_5468819_5469461_-,NA|266aa|down_3|NZ_AP022590.1_5469457_5470255_-,NA|130aa|down_4|NZ_AP022590.1_5470467_5470857_+,NA|262aa|down_6|NZ_AP022590.1_5471564_5472350_+,NA|269aa|down_7|NZ_AP022590.1_5472346_5473153_+	NA|67aa|up_9|NZ_AP022590.1_5454099_5454300_-	pfam13370, Fer4_13, 4Fe-4S single cluster domain of Ferredoxin I	NA|234aa|up_8|NZ_AP022590.1_5454358_5455060_-	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|509aa|up_7|NZ_AP022590.1_5455341_5456868_+	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins	NA|402aa|up_6|NZ_AP022590.1_5456864_5458070_+	pfam02515, CoA_transf_3, CoA-transferase family III	NA|273aa|up_5|NZ_AP022590.1_5458453_5459272_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|282aa|up_4|NZ_AP022590.1_5459279_5460125_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|421aa|up_3|NZ_AP022590.1_5460145_5461408_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|341aa|up_2|NZ_AP022590.1_5461404_5462427_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|373aa|up_1|NZ_AP022590.1_5462426_5463545_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|473aa|up_0|NZ_AP022590.1_5463541_5464960_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|600aa|down_0|NZ_AP022590.1_5466309_5468109_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|174aa|down_1|NZ_AP022590.1_5468166_5468688_-	NA	NA|214aa|down_2|NZ_AP022590.1_5468819_5469461_-	NA	NA|266aa|down_3|NZ_AP022590.1_5469457_5470255_-	NA	NA|130aa|down_4|NZ_AP022590.1_5470467_5470857_+	NA	NA|199aa|down_5|NZ_AP022590.1_5470865_5471462_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|262aa|down_6|NZ_AP022590.1_5471564_5472350_+	NA	NA|269aa|down_7|NZ_AP022590.1_5472346_5473153_+	NA	NA|193aa|down_8|NZ_AP022590.1_5473149_5473728_+	cd02862, NorE_like, NorE_like subfamily of heme-copper oxidase subunit III	NA|94aa|down_9|NZ_AP022590.1_5473731_5474013_+	pfam03626, COX4_pro, Prokaryotic Cytochrome C oxidase subunit IV
GCF_010731775.1_ASM1073177v1	NZ_AP022590	Mycobacterium mantenii strain JCM 18113	13	6181071-6181151	12	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	GGCGAAGGGGGTCGCCACGATCCG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|132aa|up_8|NZ_AP022590.1_6170087_6170483_-,NA|51aa|up_6|NZ_AP022590.1_6174566_6174719_-,NA|110aa|up_3|NZ_AP022590.1_6176150_6176480_-,NA|181aa|up_2|NZ_AP022590.1_6176476_6177019_-,NA|87aa|up_1|NZ_AP022590.1_6177672_6177933_-,NA	NA|98aa|up_9|NZ_AP022590.1_6169763_6170057_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|132aa|up_8|NZ_AP022590.1_6170087_6170483_-	NA	NA|100aa|up_7|NZ_AP022590.1_6174004_6174304_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|51aa|up_6|NZ_AP022590.1_6174566_6174719_-	NA	NA|73aa|up_5|NZ_AP022590.1_6174711_6174930_-	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional	NA|335aa|up_4|NZ_AP022590.1_6175149_6176154_-	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|110aa|up_3|NZ_AP022590.1_6176150_6176480_-	NA	NA|181aa|up_2|NZ_AP022590.1_6176476_6177019_-	NA	NA|87aa|up_1|NZ_AP022590.1_6177672_6177933_-	NA	NA|141aa|up_0|NZ_AP022590.1_6178334_6178757_+	pfam11829, DUF3349, Protein of unknown function (DUF3349)	NA|269aa|down_0|NZ_AP022590.1_6184615_6185422_+	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
