assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010731755.1_ASM1073175v1	NZ_AP022589	Mycolicibacter minnesotensis strain JCM 17932	1	732140-732284	1	PILER-CR	no	csb1gr7	csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	Orphan	CCGGCGGCGCAGGCGGCAACGGTGGCAGCGGA	32	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	NA,NA|377aa|down_4|NZ_AP022589.1_736975_738106_-	NA|569aa|up_9|NZ_AP022589.1_717975_719682_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|341aa|up_8|NZ_AP022589.1_719678_720701_-	PRK07877, PRK07877, Rv1355c family protein	NA|587aa|up_7|NZ_AP022589.1_720912_722673_-	PRK13616, PRK13616, MtrAB system accessory protein LpqB	NA|550aa|up_6|NZ_AP022589.1_722672_724322_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|229aa|up_5|NZ_AP022589.1_724344_725031_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|214aa|up_4|NZ_AP022589.1_725083_725725_-	PRK07933, PRK07933, dTMP kinase	NA|487aa|up_3|NZ_AP022589.1_725820_727281_-	pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase	NA|202aa|up_2|NZ_AP022589.1_727354_727960_-	pfam18556, TetR_C_35, Bacterial Tetracyclin repressor, C-terminal domain	NA|523aa|up_1|NZ_AP022589.1_728047_729616_+	cd07302, CHD, cyclase homology domain	NA|307aa|up_0|NZ_AP022589.1_729605_730526_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|255aa|down_0|NZ_AP022589.1_732924_733689_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	csb1gr7|358aa|down_1|NZ_AP022589.1_733690_734764_-	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	NA|314aa|down_2|NZ_AP022589.1_734769_735711_-	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|418aa|down_3|NZ_AP022589.1_735713_736967_-	PRK15131, PRK15131, mannose-6-phosphate isomerase; Provisional	NA|377aa|down_4|NZ_AP022589.1_736975_738106_-	NA	NA|467aa|down_5|NZ_AP022589.1_738102_739503_-	PRK09542, manB, phosphomannomutase/phosphoglucomutase; Reviewed	NA|147aa|down_6|NZ_AP022589.1_739562_740003_-	pfam12005, DUF3499, Protein of unknown function (DUF3499)	NA|151aa|down_7|NZ_AP022589.1_740096_740549_+	cd12954, MMP_TTHA0227_like_1, Minimal MMP-like domain found in a group of hypothetical proteins from alphaproteobacteria and actinobacteria	NA|93aa|down_8|NZ_AP022589.1_740593_740872_-	pfam02467, Whib, Transcription factor WhiB	NA|334aa|down_9|NZ_AP022589.1_741346_742348_+	PRK13606, PRK13606, LPPG:FO 2-phospho-L-lactate transferase; Provisional
GCF_010731755.1_ASM1073175v1	NZ_AP022589	Mycolicibacter minnesotensis strain JCM 17932	2	1021882-1021996	1	CRISPRCasFinder	no		csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	Orphan	CGAACCACCGGCTTCATTCGGCGGTCCCAGCTTCGC	36	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	NA,NA|164aa|down_7|NZ_AP022589.1_1029387_1029879_-	NA|144aa|up_9|NZ_AP022589.1_1012910_1013342_-	COG5562, COG5562, Phage envelope protein [General function prediction only]	NA|142aa|up_8|NZ_AP022589.1_1013437_1013863_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|339aa|up_7|NZ_AP022589.1_1013913_1014930_+	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]	NA|191aa|up_6|NZ_AP022589.1_1014931_1015504_+	pfam00908, dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase	NA|507aa|up_5|NZ_AP022589.1_1015624_1017145_+	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|388aa|up_4|NZ_AP022589.1_1017155_1018319_+	cd01162, IBD, Isobutyryl-CoA dehydrogenase	NA|292aa|up_3|NZ_AP022589.1_1018358_1019234_+	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase	NA|417aa|up_2|NZ_AP022589.1_1019305_1020556_+	pfam02720, DUF222, Domain of unknown function (DUF222)	NA|219aa|up_1|NZ_AP022589.1_1020569_1021226_-	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|178aa|up_0|NZ_AP022589.1_1021281_1021815_-	cd07505, HAD_BPGM-like, beta-phosphoglucomutase-like family of the haloacid dehalogenase-like (HAD) hydrolase superfamily	NA|217aa|down_0|NZ_AP022589.1_1022015_1022666_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|404aa|down_1|NZ_AP022589.1_1022710_1023922_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|170aa|down_2|NZ_AP022589.1_1023934_1024444_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|348aa|down_3|NZ_AP022589.1_1024567_1025611_+	COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|167aa|down_4|NZ_AP022589.1_1025615_1026116_+	COG1755, COG1755, Uncharacterized protein conserved in bacteria [Function unknown]	NA|241aa|down_5|NZ_AP022589.1_1026136_1026859_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|833aa|down_6|NZ_AP022589.1_1026855_1029354_+	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|164aa|down_7|NZ_AP022589.1_1029387_1029879_-	NA	NA|228aa|down_8|NZ_AP022589.1_1029875_1030559_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|220aa|down_9|NZ_AP022589.1_1030545_1031205_-	pfam14333, DUF4389, Domain of unknown function (DUF4389)
GCF_010731755.1_ASM1073175v1	NZ_AP022589	Mycolicibacter minnesotensis strain JCM 17932	3	1848525-1848630	2	CRISPRCasFinder	no		csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	Orphan	CCGGTGCAGTCGGGCACGGTGCGCCACCAGGTGGGCACCA	40	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	NA,NA|150aa|down_0|NZ_AP022589.1_1848662_1849112_+,NA|177aa|down_4|NZ_AP022589.1_1852054_1852585_-,NA|768aa|down_7|NZ_AP022589.1_1855136_1857440_+	NA|284aa|up_9|NZ_AP022589.1_1836415_1837267_+	pfam08044, DUF1707, Domain of unknown function (DUF1707)	NA|181aa|up_8|NZ_AP022589.1_1837407_1837950_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|364aa|up_7|NZ_AP022589.1_1838025_1839117_+	TIGR03450, mycothiol_INO1, inositol 1-phosphate synthase, Actinobacterial type	NA|295aa|up_6|NZ_AP022589.1_1839186_1840071_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|266aa|up_5|NZ_AP022589.1_1840126_1840924_+	TIGR03856, F420_MSMEG_2906, probable F420-dependent oxidoreductase, MSMEG_2906 family	NA|594aa|up_4|NZ_AP022589.1_1840905_1842687_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|249aa|up_3|NZ_AP022589.1_1842683_1843430_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|171aa|up_2|NZ_AP022589.1_1843488_1844001_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|222aa|up_1|NZ_AP022589.1_1844000_1844666_+	PRK08219, PRK08219, SDR family oxidoreductase	NA|962aa|up_0|NZ_AP022589.1_1844686_1847572_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|150aa|down_0|NZ_AP022589.1_1848662_1849112_+	NA	NA|205aa|down_1|NZ_AP022589.1_1849128_1849743_-	PRK00228, PRK00228, YqgE/AlgH family protein	NA|435aa|down_2|NZ_AP022589.1_1849871_1851176_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|258aa|down_3|NZ_AP022589.1_1851162_1851936_+	TIGR03084, conserved_hypothetical_protein, TIGR03084 family protein	NA|177aa|down_4|NZ_AP022589.1_1852054_1852585_-	NA	NA|485aa|down_5|NZ_AP022589.1_1852610_1854065_-	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase	NA|255aa|down_6|NZ_AP022589.1_1854318_1855083_+	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily	NA|768aa|down_7|NZ_AP022589.1_1855136_1857440_+	NA	NA|1111aa|down_8|NZ_AP022589.1_1857508_1860841_+	COG0728, MviN, Uncharacterized membrane protein, putative virulence factor [General function prediction only]	NA|253aa|down_9|NZ_AP022589.1_1860905_1861664_+	PRK09643, PRK09643, RNA polymerase sigma factor SigM; Reviewed
GCF_010731755.1_ASM1073175v1	NZ_AP022589	Mycolicibacter minnesotensis strain JCM 17932	4	1895484-1895579	3	CRISPRCasFinder	no	WYL	csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	Unclear	GCCCTGCTCGGGGTAGCCACCGCG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	NA,NA	NA|144aa|up_9|NZ_AP022589.1_1884279_1884711_-	pfam10756, bPH_6, Bacterial PH domain	NA|95aa|up_8|NZ_AP022589.1_1884852_1885137_-	PRK00159, PRK00159, putative septation inhibitor protein; Reviewed	NA|255aa|up_7|NZ_AP022589.1_1885229_1885994_+	COG3879, COG3879, Uncharacterized protein conserved in bacteria [Function unknown]	NA|222aa|up_6|NZ_AP022589.1_1886032_1886698_+	PRK07765, PRK07765, aminodeoxychorismate/anthranilate synthase component II	NA|625aa|up_5|NZ_AP022589.1_1886699_1888574_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|411aa|up_4|NZ_AP022589.1_1888570_1889803_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|493aa|up_3|NZ_AP022589.1_1889799_1891278_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|470aa|up_2|NZ_AP022589.1_1891274_1892684_-	pfam01098, FTSW_RODA_SPOVE, Cell cycle protein	NA|484aa|up_1|NZ_AP022589.1_1892680_1894132_-	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|156aa|up_0|NZ_AP022589.1_1894128_1894596_-	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms]	NA|404aa|down_0|NZ_AP022589.1_1896581_1897793_-	pfam00665, rve, Integrase core domain	NA|552aa|down_1|NZ_AP022589.1_1897990_1899646_-	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]	NA|215aa|down_2|NZ_AP022589.1_1899899_1900544_-	TIGR03086, TIGR03086, TIGR03086 family protein	WYL|316aa|down_3|NZ_AP022589.1_1900606_1901554_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|142aa|down_4|NZ_AP022589.1_1901564_1901990_-	pfam14832, Tautomerase_3, Putative oxalocrotonate tautomerase enzyme	NA|234aa|down_5|NZ_AP022589.1_1902016_1902718_-	PRK08264, PRK08264, SDR family oxidoreductase	NA|162aa|down_6|NZ_AP022589.1_1902813_1903299_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|203aa|down_7|NZ_AP022589.1_1903305_1903914_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|532aa|down_8|NZ_AP022589.1_1904028_1905624_+	PRK13388, PRK13388, acyl-CoA synthetase; Provisional	NA|254aa|down_9|NZ_AP022589.1_1905650_1906412_+	pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase
GCF_010731755.1_ASM1073175v1	NZ_AP022589	Mycolicibacter minnesotensis strain JCM 17932	5	2377900-2378187	1	CRT	no		csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	Orphan	NNGCCGCCGTCNCCGCCN	18	0	0	NA	NA	NA	6	6	Orphan	csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	NA|147aa|up_1|NZ_AP022589.1_2373542_2373983_+,NA|180aa|down_2|NZ_AP022589.1_2382165_2382705_+,NA|98aa|down_3|NZ_AP022589.1_2382698_2382992_+	NA|176aa|up_9|NZ_AP022589.1_2365927_2366455_-	PRK13692, PRK13692, (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional	NA|297aa|up_8|NZ_AP022589.1_2366514_2367405_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|153aa|up_7|NZ_AP022589.1_2367461_2367920_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|87aa|up_6|NZ_AP022589.1_2367956_2368217_+	pfam05768, DUF836, Glutaredoxin-like domain (DUF836)	NA|460aa|up_5|NZ_AP022589.1_2368407_2369787_+	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed	NA|312aa|up_4|NZ_AP022589.1_2369792_2370728_+	PRK00072, hemC, porphobilinogen deaminase; Reviewed	NA|571aa|up_3|NZ_AP022589.1_2370761_2372474_+	COG1587, HemD, Uroporphyrinogen-III synthase [Coenzyme metabolism]	NA|327aa|up_2|NZ_AP022589.1_2372565_2373546_+	PRK09283, PRK09283, porphobilinogen synthase	NA|147aa|up_1|NZ_AP022589.1_2373542_2373983_+	NA	NA|781aa|up_0|NZ_AP022589.1_2373989_2376332_-	pfam18564, Glyco_hydro_5_C, Glycoside hydrolase family 5 C-terminal domain	NA|315aa|down_0|NZ_AP022589.1_2378785_2379730_-	PRK09906, PRK09906, DNA-binding transcriptional regulator HcaR; Provisional	NA|737aa|down_1|NZ_AP022589.1_2379793_2382004_-	pfam18564, Glyco_hydro_5_C, Glycoside hydrolase family 5 C-terminal domain	NA|180aa|down_2|NZ_AP022589.1_2382165_2382705_+	NA	NA|98aa|down_3|NZ_AP022589.1_2382698_2382992_+	NA	NA|693aa|down_4|NZ_AP022589.1_2383018_2385097_+	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|100aa|down_5|NZ_AP022589.1_2385113_2385413_+	PTZ00449, PTZ00449, 104 kDa microneme/rhoptry antigen; Provisional	NA|278aa|down_6|NZ_AP022589.1_2385417_2386251_-	COG2382, Fes, Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]	NA|330aa|down_7|NZ_AP022589.1_2386295_2387285_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|348aa|down_8|NZ_AP022589.1_2387288_2388332_-	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|459aa|down_9|NZ_AP022589.1_2388502_2389879_+	pfam00823, PPE, PPE family
GCF_010731755.1_ASM1073175v1	NZ_AP022589	Mycolicibacter minnesotensis strain JCM 17932	6	2674643-2674943	4	CRISPRCasFinder	no		csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	Orphan	TCGCCGCCTGCGCCGCCGTTGCCGA	25	5	7	2674668-2674696|2674722-2674753|2674779-2674816|2674842-2674858|2674842-2674858|2674842-2674858|2674884-2674918	NZ_AP022589.1_2676898-2676926|NZ_AP022589.1_2676952-2676983|NZ_AP022589.1_2677009-2677046|NZ_AP022589.1_2677072-2677088|NZ_AP022589.1_3815565-3815581|NZ_AP022589.1_3772968-3772952|NZ_AP022589.1_2677114-2677148	NA	5	5	Orphan	csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	NA,NA|91aa|down_5|NZ_AP022589.1_2682306_2682579_+	NA|247aa|up_9|NZ_AP022589.1_2661945_2662686_-	cd05233, SDR_c, classical (c) SDRs	NA|281aa|up_8|NZ_AP022589.1_2662746_2663589_+	PRK06940, PRK06940, short chain dehydrogenase; Provisional	NA|306aa|up_7|NZ_AP022589.1_2663784_2664702_+	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|311aa|up_6|NZ_AP022589.1_2664712_2665645_-	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|408aa|up_5|NZ_AP022589.1_2665747_2666971_-	PRK00701, PRK00701, divalent metal cation transporter MntH	NA|362aa|up_4|NZ_AP022589.1_2667058_2668144_-	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|264aa|up_3|NZ_AP022589.1_2668155_2668947_-	PRK07814, PRK07814, SDR family oxidoreductase	NA|289aa|up_2|NZ_AP022589.1_2669024_2669891_-	cd00789, KU_like, Ku-core domain, Ku-like subfamily; composed of prokaryotic homologs of the eukaryotic DNA binding protein Ku	NA|761aa|up_1|NZ_AP022589.1_2669953_2672236_+	PRK09632, PRK09632, ATP-dependent DNA ligase; Reviewed	NA|320aa|up_0|NZ_AP022589.1_2672239_2673199_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|696aa|down_0|NZ_AP022589.1_2675425_2677513_-	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|291aa|down_1|NZ_AP022589.1_2677996_2678869_-	TIGR03619, F420_Rv2161c, probable F420-dependent oxidoreductase, Rv2161c family	NA|242aa|down_2|NZ_AP022589.1_2678952_2679678_-	pfam16170, DUF4873, Domain of unknown function (DUF4873)	NA|301aa|down_3|NZ_AP022589.1_2679674_2680577_-	pfam11583, AurF, P-aminobenzoate N-oxygenase AurF	NA|514aa|down_4|NZ_AP022589.1_2680772_2682314_+	pfam13191, AAA_16, AAA ATPase domain	NA|91aa|down_5|NZ_AP022589.1_2682306_2682579_+	NA	NA|133aa|down_6|NZ_AP022589.1_2682634_2683033_+	COG1950, COG1950, Predicted membrane protein [Function unknown]	NA|288aa|down_7|NZ_AP022589.1_2683051_2683915_+	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]	NA|250aa|down_8|NZ_AP022589.1_2683928_2684678_+	PRK08251, PRK08251, SDR family oxidoreductase	NA|277aa|down_9|NZ_AP022589.1_2684694_2685525_-	TIGR02140, Sulfate_transport_system_permease_protein_CysW, sulfate ABC transporter, permease protein CysW
GCF_010731755.1_ASM1073175v1	NZ_AP022589	Mycolicibacter minnesotensis strain JCM 17932	7	3042084-3042298	2	PILER-CR	no		csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	Orphan	CGGCGCCGGCGGTAAGGGCGGCGCCGGCGGCAACG	35	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	NA,NA	NA|620aa|up_9|NZ_AP022589.1_3028198_3030058_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|177aa|up_8|NZ_AP022589.1_3030061_3030592_-	pfam14041, Lipoprotein_21, LppP/LprE lipoprotein	NA|584aa|up_7|NZ_AP022589.1_3030701_3032453_+	PRK11634, PRK11634, ATP-dependent RNA helicase DeaD; Provisional	NA|395aa|up_6|NZ_AP022589.1_3032449_3033634_+	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|196aa|up_5|NZ_AP022589.1_3033702_3034290_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|408aa|up_4|NZ_AP022589.1_3034289_3035513_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|456aa|up_3|NZ_AP022589.1_3035557_3036925_-	TIGR00387, Glycolate_oxidase_subunit_glcD	NA|431aa|up_2|NZ_AP022589.1_3036974_3038267_-	pfam08237, PE-PPE, PE-PPE domain	NA|273aa|up_1|NZ_AP022589.1_3038370_3039189_+	cd10031, UDG-F5_TTUDGB_like, Uracil DNA glycosylase family 5, includes Thermotoga maritima TTUDGB and similar proteins	NA|344aa|up_0|NZ_AP022589.1_3039252_3040284_+	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|152aa|down_0|NZ_AP022589.1_3044402_3044858_-	pfam04075, F420H2_quin_red, F420H(2)-dependent quinone reductase	NA|146aa|down_1|NZ_AP022589.1_3044862_3045300_-	cd01277, HINT_subgroup, HINT (histidine triad nucleotide-binding protein) subgroup: Members of this CD belong to the superfamily of histidine triad hydrolases that act on alpha-phosphate of ribonucleotides	NA|385aa|down_2|NZ_AP022589.1_3045353_3046508_-	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]	NA|376aa|down_3|NZ_AP022589.1_3046524_3047652_+	pfam16701, Ad_Cy_reg, Adenylate cyclase regulatory domain	NA|326aa|down_4|NZ_AP022589.1_3047741_3048719_+	PRK07877, PRK07877, Rv1355c family protein	NA|455aa|down_5|NZ_AP022589.1_3048998_3050363_+	pfam02720, DUF222, Domain of unknown function (DUF222)	NA|623aa|down_6|NZ_AP022589.1_3050369_3052238_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|583aa|down_7|NZ_AP022589.1_3052234_3053983_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|167aa|down_8|NZ_AP022589.1_3054155_3054656_+	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|181aa|down_9|NZ_AP022589.1_3054652_3055195_+	pfam12079, DUF3558, Protein of unknown function (DUF3558)
GCF_010731755.1_ASM1073175v1	NZ_AP022589	Mycolicibacter minnesotensis strain JCM 17932	8	3105850-3105987	5	CRISPRCasFinder	no		csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	Orphan	CTGGAACTCCTTCTGGAAGCCCCGAAAATCTCGGAGTTGACTT	43	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	NA,NA	NA|87aa|up_9|NZ_AP022589.1_3096741_3097002_+	PRK05880, PRK05880, F0F1 ATP synthase subunit C; Validated	NA|174aa|up_8|NZ_AP022589.1_3097011_3097533_+	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated	NA|446aa|up_7|NZ_AP022589.1_3097541_3098879_+	PRK13428, PRK13428, F0F1 ATP synthase subunit delta; Provisional	NA|550aa|up_6|NZ_AP022589.1_3098948_3100598_+	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated	NA|308aa|up_5|NZ_AP022589.1_3100605_3101529_+	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated	NA|477aa|up_4|NZ_AP022589.1_3101553_3102984_+	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|122aa|up_3|NZ_AP022589.1_3103018_3103384_+	PRK00571, atpC, F0F1 ATP synthase subunit epsilon; Validated	NA|148aa|up_2|NZ_AP022589.1_3103397_3103841_+	pfam10739, DUF2550, Protein of unknown function (DUF2550)	NA|197aa|up_1|NZ_AP022589.1_3103865_3104456_-	COG2096, COG2096, cob(I)alamin adenosyltransferase [Coenzyme transport and    metabolism]	NA|418aa|up_0|NZ_AP022589.1_3104556_3105810_+	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|331aa|down_0|NZ_AP022589.1_3111764_3112757_+	pfam08237, PE-PPE, PE-PPE domain	NA|338aa|down_1|NZ_AP022589.1_3113034_3114048_+	pfam08237, PE-PPE, PE-PPE domain	NA|163aa|down_2|NZ_AP022589.1_3114058_3114547_-	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional	NA|502aa|down_3|NZ_AP022589.1_3114543_3116049_-	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism]	NA|425aa|down_4|NZ_AP022589.1_3116144_3117419_+	pfam04960, Glutaminase, Glutaminase	NA|535aa|down_5|NZ_AP022589.1_3117425_3119030_-	cd07302, CHD, cyclase homology domain	NA|225aa|down_6|NZ_AP022589.1_3119076_3119751_+	PRK03298, PRK03298, endonuclease NucS	NA|369aa|down_7|NZ_AP022589.1_3119799_3120906_+	cd04747, OYE_like_5_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 5	NA|164aa|down_8|NZ_AP022589.1_3121315_3121807_-	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	NA|394aa|down_9|NZ_AP022589.1_3121889_3123071_+	PRK05790, PRK05790, putative acyltransferase; Provisional
GCF_010731755.1_ASM1073175v1	NZ_AP022589	Mycolicibacter minnesotensis strain JCM 17932	9	3166088-3166199	3	PILER-CR	no	DEDDh	csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	Unclear	GGCCCCGGCGGAAACGGCGGCAACGGCGGCG	31	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	NA,NA	NA|419aa|up_9|NZ_AP022589.1_3144153_3145410_-	cd06174, MFS, Major Facilitator Superfamily	NA|241aa|up_8|NZ_AP022589.1_3145529_3146252_+	pfam08924, DUF1906, Domain of unknown function (DUF1906)	NA|3079aa|up_7|NZ_AP022589.1_3146687_3155924_+	COG4982, COG4982, 3-oxoacyl-[acyl-carrier protein]	NA|130aa|up_6|NZ_AP022589.1_3155934_3156324_+	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional	NA|452aa|up_5|NZ_AP022589.1_3156345_3157701_+	PRK07907, PRK07907, hypothetical protein; Provisional	NA|315aa|up_4|NZ_AP022589.1_3157720_3158665_+	cd08420, PBP2_CysL_like, C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold	NA|339aa|up_3|NZ_AP022589.1_3158689_3159706_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|158aa|up_2|NZ_AP022589.1_3159894_3160368_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|76aa|up_1|NZ_AP022589.1_3160461_3160689_+	pfam12277, DUF3618, Protein of unknown function (DUF3618)	NA|779aa|up_0|NZ_AP022589.1_3160754_3163091_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|214aa|down_0|NZ_AP022589.1_3166560_3167202_-	pfam07510, DUF1524, Protein of unknown function (DUF1524)	NA|410aa|down_1|NZ_AP022589.1_3168061_3169291_+	pfam17964, Big_10, Bacterial Ig domain	NA|233aa|down_2|NZ_AP022589.1_3169294_3169993_-	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|368aa|down_3|NZ_AP022589.1_3170115_3171219_-	pfam08237, PE-PPE, PE-PPE domain	DEDDh|219aa|down_4|NZ_AP022589.1_3171547_3172204_-	PRK05359, PRK05359, oligoribonuclease; Provisional	NA|523aa|down_5|NZ_AP022589.1_3172279_3173848_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|269aa|down_6|NZ_AP022589.1_3174119_3174926_-	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|435aa|down_7|NZ_AP022589.1_3174949_3176254_+	COG2270, COG2270, Permeases of the major facilitator superfamily [General function prediction only]	NA|259aa|down_8|NZ_AP022589.1_3176268_3177045_-	COG3889, COG3889, Predicted solute binding protein [General function prediction only]	NA|218aa|down_9|NZ_AP022589.1_3177104_3177758_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family
GCF_010731755.1_ASM1073175v1	NZ_AP022589	Mycolicibacter minnesotensis strain JCM 17932	10	3324075-3324157	6	CRISPRCasFinder	no		csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	Orphan	GACCCGCTTCGCCCGGCTTCGCCGCGCT	28	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	NA|222aa|up_4|NZ_AP022589.1_3317771_3318437_+,NA|181aa|up_3|NZ_AP022589.1_3318591_3319134_+,NA|66aa|down_0|NZ_AP022589.1_3324182_3324380_+,NA|278aa|down_6|NZ_AP022589.1_3330096_3330930_-	NA|321aa|up_9|NZ_AP022589.1_3314074_3315037_+	PRK07914, PRK07914, hypothetical protein; Reviewed	NA|87aa|up_8|NZ_AP022589.1_3315107_3315368_-	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|286aa|up_7|NZ_AP022589.1_3315468_3316326_-	PRK00055, PRK00055, ribonuclease Z; Reviewed	NA|143aa|up_6|NZ_AP022589.1_3316452_3316881_+	cd04623, CBS_pair_bac_euk, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and eukaryotes	NA|204aa|up_5|NZ_AP022589.1_3316881_3317493_-	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|222aa|up_4|NZ_AP022589.1_3317771_3318437_+	NA	NA|181aa|up_3|NZ_AP022589.1_3318591_3319134_+	NA	NA|639aa|up_2|NZ_AP022589.1_3319226_3321143_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|238aa|up_1|NZ_AP022589.1_3321190_3321904_+	pfam14032, PknH_C, PknH-like extracellular domain	NA|684aa|up_0|NZ_AP022589.1_3321929_3323981_-	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|66aa|down_0|NZ_AP022589.1_3324182_3324380_+	NA	NA|344aa|down_1|NZ_AP022589.1_3324738_3325770_+	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|285aa|down_2|NZ_AP022589.1_3325766_3326621_+	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT	NA|272aa|down_3|NZ_AP022589.1_3326622_3327438_+	TIGR02140, Sulfate_transport_system_permease_protein_CysW, sulfate ABC transporter, permease protein CysW	NA|344aa|down_4|NZ_AP022589.1_3327434_3328466_+	TIGR00968, 3a0106s01, sulfate ABC transporter, ATP-binding protein	NA|546aa|down_5|NZ_AP022589.1_3328462_3330100_-	cd06199, SiR, Cytochrome p450- like alpha subunits of E	NA|278aa|down_6|NZ_AP022589.1_3330096_3330930_-	NA	NA|248aa|down_7|NZ_AP022589.1_3331004_3331748_-	COG2138, COG2138, Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism]	NA|240aa|down_8|NZ_AP022589.1_3331726_3332446_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|560aa|down_9|NZ_AP022589.1_3332442_3334122_-	COG0155, CysI, Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism]
GCF_010731755.1_ASM1073175v1	NZ_AP022589	Mycolicibacter minnesotensis strain JCM 17932	11	3708755-3708991	4	PILER-CR	no	csa3	csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	Type I-A	GACGGCGACGAGAACGGCAACGGCGGTGCCGGCGGTATCGGCGGTGCCGG	50	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,csb1gr7,DEDDh,WYL,DinG,cas4	NA,NA	NA|969aa|up_9|NZ_AP022589.1_3693827_3696734_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|394aa|up_8|NZ_AP022589.1_3696734_3697916_-	pfam06224, HTH_42, Winged helix DNA-binding domain	NA|80aa|up_7|NZ_AP022589.1_3697919_3698159_-	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|439aa|up_6|NZ_AP022589.1_3698184_3699501_-	COG0627, COG0627, Predicted esterase [General function prediction only]	NA|1116aa|up_5|NZ_AP022589.1_3699558_3702906_-	PRK02983, lysS, bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX	NA|65aa|up_4|NZ_AP022589.1_3703912_3704107_+	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|130aa|up_3|NZ_AP022589.1_3704164_3704554_+	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|261aa|up_2|NZ_AP022589.1_3704568_3705351_+	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|373aa|up_1|NZ_AP022589.1_3705358_3706477_-	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|302aa|up_0|NZ_AP022589.1_3706632_3707538_+	cd07302, CHD, cyclase homology domain	NA|86aa|down_0|NZ_AP022589.1_3711890_3712148_-	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system	NA|92aa|down_1|NZ_AP022589.1_3712144_3712420_-	COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|351aa|down_2|NZ_AP022589.1_3712638_3713691_+	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|828aa|down_3|NZ_AP022589.1_3713690_3716174_+	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|496aa|down_4|NZ_AP022589.1_3716195_3717683_+	COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]	NA|353aa|down_5|NZ_AP022589.1_3717761_3718820_+	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|401aa|down_6|NZ_AP022589.1_3718816_3720019_+	PRK05388, argJ, bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA|292aa|down_7|NZ_AP022589.1_3720015_3720891_+	PRK00942, PRK00942, acetylglutamate kinase; Provisional	NA|393aa|down_8|NZ_AP022589.1_3720887_3722066_+	PRK03244, argD, acetylornithine transaminase	NA|309aa|down_9|NZ_AP022589.1_3722062_3722989_+	PRK00779, PRK00779, ornithine carbamoyltransferase; Provisional
