assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010731295.1_ASM1073129v1	NZ_AP022579	Mycolicibacterium boenickei strain JCM 15653	1	712545-712671	1	CRISPRCasFinder	no		c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,csa3,DinG,cas4,WYL	Orphan	GGGCTGTGACTCGCGTTTCGGGGCGACCGTCAGGTAGAAACCG	43	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,csa3,DinG,cas4,WYL	NA,NA|91aa|down_3|NZ_AP022579.1_714996_715269_+,NA|131aa|down_4|NZ_AP022579.1_715381_715774_+,NA|84aa|down_5|NZ_AP022579.1_716571_716823_+,NA|105aa|down_6|NZ_AP022579.1_716822_717137_+,NA|74aa|down_7|NZ_AP022579.1_717112_717334_-	NA|343aa|up_9|NZ_AP022579.1_699604_700633_+	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|378aa|up_8|NZ_AP022579.1_700632_701766_+	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|287aa|up_7|NZ_AP022579.1_701732_702593_-	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family	NA|471aa|up_6|NZ_AP022579.1_702589_704002_-	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|456aa|up_5|NZ_AP022579.1_704017_705385_-	cd06836, PLPDE_III_ODC_DapDC_like_1, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Uncharacterized Proteins with similarity to Ornithine and Diaminopimelate Decarboxylases	NA|534aa|up_4|NZ_AP022579.1_705508_707110_-	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain	NA|110aa|up_3|NZ_AP022579.1_707204_707534_-	pfam02467, Whib, Transcription factor WhiB	NA|817aa|up_2|NZ_AP022579.1_707860_710311_+	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|315aa|up_1|NZ_AP022579.1_710338_711283_+	COG1408, COG1408, Predicted phosphohydrolases [General function prediction only]	NA|369aa|up_0|NZ_AP022579.1_711279_712386_+	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism]	NA|415aa|down_0|NZ_AP022579.1_712876_714121_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|202aa|down_1|NZ_AP022579.1_714107_714713_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|66aa|down_2|NZ_AP022579.1_714799_714997_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|91aa|down_3|NZ_AP022579.1_714996_715269_+	NA	NA|131aa|down_4|NZ_AP022579.1_715381_715774_+	NA	NA|84aa|down_5|NZ_AP022579.1_716571_716823_+	NA	NA|105aa|down_6|NZ_AP022579.1_716822_717137_+	NA	NA|74aa|down_7|NZ_AP022579.1_717112_717334_-	NA	NA|385aa|down_8|NZ_AP022579.1_718273_719428_+	TIGR01554, prophage_Lp3_protein_18, phage major capsid protein, HK97 family	NA|740aa|down_9|NZ_AP022579.1_719517_721737_+	pfam01763, Herpes_UL6, Herpesvirus UL6 like
GCF_010731295.1_ASM1073129v1	NZ_AP022579	Mycolicibacterium boenickei strain JCM 15653	2	1331155-1331513	2	CRISPRCasFinder	no		c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,csa3,DinG,cas4,WYL	Orphan	CGCCGCCGTAGCCGCCCTGCTGGCCG	26	0	0	NA	NA	NA	5	5	Orphan	c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,csa3,DinG,cas4,WYL	NA,NA|648aa|down_4|NZ_AP022579.1_1336133_1338077_+,NA|820aa|down_5|NZ_AP022579.1_1338073_1340533_+,NA|386aa|down_6|NZ_AP022579.1_1340534_1341692_+	NA|139aa|up_9|NZ_AP022579.1_1320214_1320631_-	pfam10756, bPH_6, Bacterial PH domain	NA|95aa|up_8|NZ_AP022579.1_1320786_1321071_-	PRK00159, PRK00159, putative septation inhibitor protein; Reviewed	NA|250aa|up_7|NZ_AP022579.1_1321165_1321915_+	COG3879, COG3879, Uncharacterized protein conserved in bacteria [Function unknown]	NA|225aa|up_6|NZ_AP022579.1_1321946_1322621_+	PRK07765, PRK07765, aminodeoxychorismate/anthranilate synthase component II	NA|624aa|up_5|NZ_AP022579.1_1322598_1324470_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|426aa|up_4|NZ_AP022579.1_1324466_1325744_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|492aa|up_3|NZ_AP022579.1_1325766_1327242_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|472aa|up_2|NZ_AP022579.1_1327238_1328654_-	pfam01098, FTSW_RODA_SPOVE, Cell cycle protein	NA|505aa|up_1|NZ_AP022579.1_1328650_1330165_-	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|156aa|up_0|NZ_AP022579.1_1330250_1330718_-	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms]	NA|268aa|down_0|NZ_AP022579.1_1332736_1333540_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|289aa|down_1|NZ_AP022579.1_1333540_1334407_-	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form	NA|258aa|down_2|NZ_AP022579.1_1334461_1335235_-	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine	NA|214aa|down_3|NZ_AP022579.1_1335265_1335907_-	pfam00881, Nitroreductase, Nitroreductase family	NA|648aa|down_4|NZ_AP022579.1_1336133_1338077_+	NA	NA|820aa|down_5|NZ_AP022579.1_1338073_1340533_+	NA	NA|386aa|down_6|NZ_AP022579.1_1340534_1341692_+	NA	NA|168aa|down_7|NZ_AP022579.1_1341774_1342278_+	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme	NA|322aa|down_8|NZ_AP022579.1_1342274_1343240_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|89aa|down_9|NZ_AP022579.1_1343284_1343551_+	TIGR03543, divI1A_rptt_fam, DivIVA domain repeat protein
GCF_010731295.1_ASM1073129v1	NZ_AP022579	Mycolicibacterium boenickei strain JCM 15653	3	2344005-2344151	3	CRISPRCasFinder	no		c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,csa3,DinG,cas4,WYL	Orphan	GGCGTCCATCGGGGCGGCCTCGGGAGCCGGGGC	33	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,csa3,DinG,cas4,WYL	NA|241aa|up_9|NZ_AP022579.1_2333583_2334306_+,NA|66aa|up_3|NZ_AP022579.1_2342223_2342421_+,NA	NA|241aa|up_9|NZ_AP022579.1_2333583_2334306_+	NA	NA|115aa|up_8|NZ_AP022579.1_2334395_2334740_+	cd02230, cupin_HP0902-like, Helicobacter pylori HP0902 and related proteins, cupin domain	NA|116aa|up_7|NZ_AP022579.1_2336324_2336672_-	cd07238, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|550aa|up_6|NZ_AP022579.1_2336668_2338318_-	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]	NA|476aa|up_5|NZ_AP022579.1_2338389_2339817_-	COG0627, COG0627, Predicted esterase [General function prediction only]	NA|753aa|up_4|NZ_AP022579.1_2339870_2342129_-	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain	NA|66aa|up_3|NZ_AP022579.1_2342223_2342421_+	NA	NA|158aa|up_2|NZ_AP022579.1_2342423_2342897_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|162aa|up_1|NZ_AP022579.1_2342893_2343379_+	cd00886, MogA_MoaB, MogA_MoaB family	NA|143aa|up_0|NZ_AP022579.1_2343404_2343833_+	cd00756, MoaE, MoaE family	NA|88aa|down_0|NZ_AP022579.1_2345050_2345314_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|358aa|down_1|NZ_AP022579.1_2345314_2346388_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|131aa|down_2|NZ_AP022579.1_2346384_2346777_-	PRK11770, PRK11770, YccF domain-containing protein	NA|137aa|down_3|NZ_AP022579.1_2346939_2347350_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|339aa|down_4|NZ_AP022579.1_2347435_2348452_+	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|171aa|down_5|NZ_AP022579.1_2348448_2348961_-	pfam10969, DUF2771, Protein of unknown function (DUF2771)	NA|555aa|down_6|NZ_AP022579.1_2348957_2350622_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|265aa|down_7|NZ_AP022579.1_2350709_2351504_+	pfam11228, DUF3027, Protein of unknown function (DUF3027)	NA|249aa|down_8|NZ_AP022579.1_2351516_2352263_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|477aa|down_9|NZ_AP022579.1_2352259_2353690_-	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion]
GCF_010731295.1_ASM1073129v1	NZ_AP022579	Mycolicibacterium boenickei strain JCM 15653	4	2815516-2815601	4	CRISPRCasFinder	no		c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,csa3,DinG,cas4,WYL	Orphan	TCACGAAGGTCGGCAGCGATCCGGTG	26	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,Cas14u_CAS-V,cas3,DEDDh,csa3,DinG,cas4,WYL	NA|458aa|up_5|NZ_AP022579.1_2809858_2811232_+,NA|142aa|up_4|NZ_AP022579.1_2811367_2811793_+,NA|138aa|up_3|NZ_AP022579.1_2811918_2812332_+,NA|191aa|up_2|NZ_AP022579.1_2812402_2812975_+,NA|410aa|up_0|NZ_AP022579.1_2813953_2815183_+,NA|105aa|down_0|NZ_AP022579.1_2816019_2816334_+,NA|168aa|down_1|NZ_AP022579.1_2816377_2816881_+	NA|677aa|up_9|NZ_AP022579.1_2805690_2807721_+	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|125aa|up_8|NZ_AP022579.1_2807731_2808106_+	cd00781, ketosteroid_isomerase, ketosteroid isomerase: Many biological reactions proceed by enzymatic cleavage of a C-H bond adjacent to carbonyl or a carboxyl group, leading to an enol or a enolate intermediate that is subsequently re-protonated at the same or an adjacent carbon	NA|248aa|up_7|NZ_AP022579.1_2808251_2808995_-	TIGR01065, Hypothetical_UPF0073_protein_yqfA	NA|264aa|up_6|NZ_AP022579.1_2809051_2809843_+	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional	NA|458aa|up_5|NZ_AP022579.1_2809858_2811232_+	NA	NA|142aa|up_4|NZ_AP022579.1_2811367_2811793_+	NA	NA|138aa|up_3|NZ_AP022579.1_2811918_2812332_+	NA	NA|191aa|up_2|NZ_AP022579.1_2812402_2812975_+	NA	NA|313aa|up_1|NZ_AP022579.1_2812984_2813923_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|410aa|up_0|NZ_AP022579.1_2813953_2815183_+	NA	NA|105aa|down_0|NZ_AP022579.1_2816019_2816334_+	NA	NA|168aa|down_1|NZ_AP022579.1_2816377_2816881_+	NA	NA|488aa|down_2|NZ_AP022579.1_2816905_2818369_+	PRK13580, PRK13580, glycine hydroxymethyltransferase	NA|276aa|down_3|NZ_AP022579.1_2818447_2819275_+	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|438aa|down_4|NZ_AP022579.1_2819475_2820789_+	COG1875, COG1875, NYN ribonuclease and ATPase of PhoH family domains [General    function prediction only]	NA|295aa|down_5|NZ_AP022579.1_2820870_2821755_+	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins	NA|328aa|down_6|NZ_AP022579.1_2821825_2822809_+	PRK07877, PRK07877, Rv1355c family protein	NA|149aa|down_7|NZ_AP022579.1_2822829_2823276_+	pfam00582, Usp, Universal stress protein family	NA|216aa|down_8|NZ_AP022579.1_2823286_2823934_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|145aa|down_9|NZ_AP022579.1_2824015_2824450_+	pfam12900, Pyridox_ox_2, Pyridoxamine 5'-phosphate oxidase
